View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16821_low_10 (Length: 369)
Name: NF16821_low_10
Description: NF16821
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16821_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 310; Significance: 1e-174; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 310; E-Value: 1e-174
Query Start/End: Original strand, 19 - 353
Target Start/End: Complemental strand, 43099532 - 43099194
Alignment:
| Q |
19 |
accttttcaccaaccaacacatagcaagaccatgttacgagtacaattcgaagttctcgattattttgtggataacagggtatcttttggtattactgat |
118 |
Q |
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| T |
43099532 |
accttttcaccaaccaacacatagcaagaccatgttacgagtacaattcgaagttctcgattattttgtggataacagtgtatctttcggtattactgat |
43099433 |
T |
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| Q |
119 |
ggaagagttcgtggatttgtgcaatttggggtggtggtgaatactttgattaagatggatgggttgtttcatccgagtgaatatcacttgaaggttacat |
218 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
43099432 |
ggaagagttcgtggatttgtgcaatttggggtggtggtgaatactttgattaagatggatgggttgtttcatccgagtgaatatcgcttgaaggttacat |
43099333 |
T |
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| Q |
219 |
gcaaacctttgaactttggaattccatcgtccaacattaacaacgttacttgggaattattgggtagtgtagcatgttaatgatttaacaatggattag- |
317 |
Q |
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| T |
43099332 |
gcaaacctttgaactttggaattccatcgtccaacattaacaacgttacttgggaattattgggtagtgtagcatgttaatgatttaacaatggattagg |
43099233 |
T |
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| Q |
318 |
---ggagtgtgcatgttcaatgttttaatttgtgttcat |
353 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
43099232 |
ggtggagtgtgcatgttcaatgttttaatttgtgttcat |
43099194 |
T |
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