View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16821_low_7 (Length: 406)

Name: NF16821_low_7
Description: NF16821
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16821_low_7
NF16821_low_7
[»] chr4 (37 HSPs)
chr4 (37-192)||(31912518-31912673)
chr4 (235-392)||(31912723-31912880)
chr4 (256-392)||(31916977-31917107)
chr4 (256-392)||(31972904-31973034)
chr4 (72-115)||(31976184-31976227)
chr4 (1-38)||(18052712-18052749)
chr4 (1-38)||(34491927-34491964)
chr4 (1-41)||(10555340-10555380)
chr4 (1-45)||(30088842-30088886)
chr4 (1-41)||(42507780-42507820)
chr4 (1-45)||(48380566-48380610)
chr4 (1-40)||(388042-388081)
chr4 (37-68)||(31975113-31975144)
chr4 (1-39)||(1607033-1607071)
chr4 (1-39)||(4294173-4294211)
chr4 (1-39)||(5388157-5388195)
chr4 (1-39)||(23621637-23621675)
chr4 (1-43)||(27383678-27383720)
chr4 (1-39)||(31648578-31648616)
chr4 (1-39)||(34016766-34016804)
chr4 (1-39)||(49236003-49236041)
chr4 (1-39)||(51817188-51817226)
chr4 (1-39)||(52397935-52397973)
chr4 (1-39)||(55968540-55968578)
chr4 (1-39)||(55984358-55984396)
chr4 (2-39)||(2401219-2401256)
chr4 (1-38)||(7258153-7258190)
chr4 (1-38)||(13880451-13880488)
chr4 (1-38)||(22019090-22019127)
chr4 (1-38)||(25771222-25771259)
chr4 (1-38)||(32860863-32860900)
chr4 (1-38)||(34447632-34447669)
chr4 (1-38)||(35877087-35877124)
chr4 (1-38)||(42179693-42179730)
chr4 (1-38)||(50533768-50533805)
chr4 (1-38)||(56038660-56038697)
chr4 (1-41)||(1788838-1788878)
[»] chr5 (23 HSPs)
chr5 (1-45)||(29619462-29619506)
chr5 (1-46)||(4890183-4890228)
chr5 (1-38)||(9201129-9201166)
chr5 (1-38)||(21772896-21772933)
chr5 (1-41)||(43359649-43359689)
chr5 (1-40)||(12360785-12360824)
chr5 (1-40)||(34163120-34163159)
chr5 (1-39)||(8883197-8883235)
chr5 (1-31)||(13978469-13978499)
chr5 (1-39)||(34382066-34382104)
chr5 (1-39)||(35869928-35869966)
chr5 (1-39)||(42940763-42940801)
chr5 (1-42)||(440089-440130)
chr5 (1-38)||(4456393-4456430)
chr5 (1-38)||(5378210-5378247)
chr5 (1-38)||(7363342-7363379)
chr5 (1-38)||(18094725-18094762)
chr5 (1-38)||(27187457-27187494)
chr5 (1-38)||(29816204-29816241)
chr5 (1-33)||(8225613-8225645)
chr5 (5-41)||(9591351-9591387)
chr5 (1-33)||(35080272-35080304)
chr5 (7-39)||(41348984-41349016)
[»] chr8 (36 HSPs)
chr8 (1-44)||(19715221-19715264)
chr8 (1-47)||(23597252-23597298)
chr8 (1-47)||(23606174-23606220)
chr8 (3-41)||(38367650-38367688)
chr8 (1-38)||(18673368-18673405)
chr8 (1-41)||(16872605-16872645)
chr8 (1-33)||(24333013-24333045)
chr8 (1-41)||(42192471-42192511)
chr8 (1-40)||(29938288-29938327)
chr8 (1-32)||(37954722-37954753)
chr8 (1-32)||(37965081-37965112)
chr8 (1-39)||(8378334-8378372)
chr8 (1-39)||(22578204-22578242)
chr8 (1-39)||(31231119-31231157)
chr8 (1-39)||(31873664-31873702)
chr8 (1-39)||(37664979-37665017)
chr8 (1-39)||(38896703-38896741)
chr8 (1-39)||(42373251-42373289)
chr8 (1-34)||(899607-899640)
chr8 (1-38)||(1042370-1042407)
chr8 (1-38)||(5830942-5830979)
chr8 (1-38)||(6878512-6878549)
chr8 (1-38)||(12000480-12000517)
chr8 (1-38)||(14433393-14433430)
chr8 (1-38)||(20091220-20091257)
chr8 (1-38)||(23897680-23897717)
chr8 (1-42)||(25838717-25838758)
chr8 (1-38)||(28074506-28074543)
chr8 (1-38)||(30526157-30526194)
chr8 (1-38)||(35544237-35544274)
chr8 (1-38)||(35631027-35631064)
chr8 (1-38)||(39284196-39284233)
chr8 (1-38)||(42946664-42946701)
chr8 (1-41)||(7884533-7884573)
chr8 (1-45)||(32395281-32395325)
chr8 (1-41)||(37163778-37163818)
[»] chr7 (27 HSPs)
chr7 (1-44)||(8611807-8611850)
chr7 (1-39)||(25651231-25651269)
chr7 (1-39)||(37115729-37115767)
chr7 (1-39)||(40768721-40768759)
chr7 (1-38)||(5528384-5528421)
chr7 (1-42)||(22624310-22624351)
chr7 (1-41)||(45823203-45823243)
chr7 (1-40)||(24924416-24924455)
chr7 (1-40)||(45780894-45780933)
chr7 (1-39)||(1643750-1643788)
chr7 (1-39)||(10453152-10453190)
chr7 (1-39)||(22918172-22918210)
chr7 (1-39)||(23059069-23059107)
chr7 (1-39)||(46373247-46373285)
chr7 (1-38)||(4513604-4513641)
chr7 (3-40)||(9818082-9818119)
chr7 (3-40)||(10720007-10720044)
chr7 (1-38)||(13439317-13439354)
chr7 (1-38)||(24685672-24685709)
chr7 (8-41)||(32827872-32827905)
chr7 (1-38)||(35421859-35421896)
chr7 (1-38)||(44480986-44481023)
chr7 (1-38)||(44894818-44894855)
chr7 (1-38)||(47578923-47578960)
chr7 (1-33)||(23726620-23726652)
chr7 (1-45)||(25547954-25547998)
chr7 (8-40)||(28472319-28472351)
[»] chr3 (32 HSPs)
chr3 (1-44)||(5137716-5137759)
chr3 (1-44)||(48910584-48910627)
chr3 (1-39)||(42490040-42490078)
chr3 (1-39)||(46195872-46195910)
chr3 (1-38)||(4392576-4392613)
chr3 (1-38)||(27942259-27942296)
chr3 (1-38)||(47241162-47241199)
chr3 (1-41)||(43599567-43599607)
chr3 (1-40)||(19961070-19961109)
chr3 (1-40)||(25904153-25904192)
chr3 (1-40)||(29651991-29652030)
chr3 (1-40)||(30744850-30744889)
chr3 (1-40)||(52060516-52060555)
chr3 (1-39)||(240718-240756)
chr3 (1-39)||(3671625-3671663)
chr3 (1-39)||(38783686-38783724)
chr3 (1-39)||(42939820-42939858)
chr3 (1-39)||(43175733-43175771)
chr3 (1-39)||(45824130-45824168)
chr3 (1-38)||(15019778-15019815)
chr3 (1-38)||(24089328-24089365)
chr3 (1-38)||(24978829-24978866)
chr3 (1-38)||(28226971-28227008)
chr3 (1-38)||(34663430-34663467)
chr3 (1-38)||(41751101-41751138)
chr3 (1-38)||(44048098-44048135)
chr3 (1-38)||(48333710-48333747)
chr3 (1-38)||(51865689-51865726)
chr3 (1-41)||(3645950-3645990)
chr3 (1-29)||(3835259-3835287)
chr3 (1-45)||(49610191-49610235)
chr3 (1-33)||(54080355-54080387)
[»] chr1 (25 HSPs)
chr1 (1-40)||(2994133-2994172)
chr1 (1-41)||(3552804-3552844)
chr1 (1-33)||(29095252-29095284)
chr1 (1-40)||(6920974-6921013)
chr1 (3-42)||(16436051-16436090)
chr1 (1-40)||(24589496-24589535)
chr1 (1-40)||(38238864-38238903)
chr1 (1-44)||(41529103-41529146)
chr1 (1-40)||(49251809-49251848)
chr1 (1-40)||(50942617-50942656)
chr1 (1-39)||(18127333-18127371)
chr1 (1-39)||(24583828-24583866)
chr1 (1-43)||(51984004-51984046)
chr1 (1-38)||(4226239-4226276)
chr1 (1-38)||(4750444-4750481)
chr1 (1-38)||(8712122-8712159)
chr1 (1-42)||(29361488-29361529)
chr1 (1-38)||(29672303-29672340)
chr1 (1-38)||(39282532-39282569)
chr1 (1-38)||(52833599-52833636)
chr1 (3-39)||(16010915-16010951)
chr1 (1-33)||(34347276-34347308)
chr1 (1-41)||(34967575-34967615)
chr1 (1-33)||(42643113-42643145)
chr1 (2-38)||(46569169-46569205)
[»] scaffold1515 (1 HSPs)
scaffold1515 (1-39)||(1444-1482)
[»] chr6 (20 HSPs)
chr6 (1-38)||(12499715-12499752)
chr6 (1-38)||(12507044-12507081)
chr6 (1-38)||(12509149-12509186)
chr6 (3-39)||(1228248-1228284)
chr6 (6-46)||(6335159-6335199)
chr6 (1-41)||(10364716-10364756)
chr6 (1-44)||(1228389-1228432)
chr6 (1-39)||(2603640-2603678)
chr6 (1-39)||(6835711-6835749)
chr6 (1-39)||(8201459-8201497)
chr6 (1-39)||(15497840-15497878)
chr6 (1-31)||(17360606-17360636)
chr6 (1-38)||(1352471-1352508)
chr6 (1-38)||(9461573-9461610)
chr6 (1-38)||(9961315-9961352)
chr6 (1-38)||(11172885-11172922)
chr6 (1-38)||(14499108-14499145)
chr6 (1-42)||(31022630-31022671)
chr6 (1-33)||(9660470-9660502)
chr6 (1-45)||(10629561-10629605)
[»] chr2 (24 HSPs)
chr2 (1-38)||(28206652-28206689)
chr2 (1-38)||(40171830-40171867)
chr2 (1-33)||(41186787-41186819)
chr2 (1-40)||(325376-325415)
chr2 (1-40)||(3628629-3628668)
chr2 (1-40)||(36443511-36443550)
chr2 (1-47)||(6027094-6027140)
chr2 (1-39)||(19002904-19002942)
chr2 (1-39)||(22060978-22061016)
chr2 (1-39)||(34036096-34036134)
chr2 (1-39)||(39407775-39407813)
chr2 (1-39)||(39927735-39927773)
chr2 (1-39)||(40833467-40833505)
chr2 (1-38)||(13375311-13375348)
chr2 (1-38)||(14527749-14527786)
chr2 (1-38)||(14943508-14943545)
chr2 (1-38)||(28786968-28787005)
chr2 (1-34)||(39235227-39235260)
chr2 (1-38)||(40171782-40171819)
chr2 (1-38)||(42056036-42056073)
chr2 (1-33)||(10877309-10877341)
chr2 (3-39)||(31909824-31909860)
chr2 (1-33)||(35669691-35669723)
chr2 (1-33)||(44653675-44653707)
[»] scaffold0160 (1 HSPs)
scaffold0160 (1-38)||(26005-26042)
[»] scaffold0037 (1 HSPs)
scaffold0037 (1-38)||(98862-98899)
[»] scaffold0427 (1 HSPs)
scaffold0427 (1-33)||(5236-5268)


Alignment Details
Target: chr4 (Bit Score: 152; Significance: 2e-80; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 37 - 192
Target Start/End: Original strand, 31912518 - 31912673
Alignment:
Q  37 tataatttagtatctcaaccaacatctgaaaatcattattctttcacacactctcccacatttccttctctcttagagcatctagaatcgagacattcat 136  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  31912518 tataatttagtatctcaaccaacatctgaaaatcattattctttcacacactctcccacatttccttctctcttagagcatctagaatcgtgacattcat 31912617  T
Q  137 ttttaatattaatgcagggccttcgcgatttgatcggcctgtgtgtatacacaccg 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31912618 ttttaatattaatgcagggccttcgcgatttgatcggcctgtgtgtatacacaccg 31912673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 235 - 392
Target Start/End: Original strand, 31912723 - 31912880
Alignment:
Q  235 aagatcactcaatatatgttacacaacaacaataacgacagttgtgttacaattatatttacagttcttannnnnnncatgtatacttatatacagatac 334  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  31912723 aagatcactcaatatacgttacacaacaacaataacgacagttgtgttacaattatatttacagttcttatttttttcatgtatacttatatacagatac 31912822  T
Q  335 atctcaatcataatgttataccaaaaattatatacatcccagaaaatgatgaaattaa 392  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31912823 atctcaatcataatgttataccaaaaattatatacatcccagaaaatgatgaaattaa 31912880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 256 - 392
Target Start/End: Original strand, 31916977 - 31917107
Alignment:
Q  256 cacaacaacaataacgacagtt---gtgttacaattatatttacagttcttannnnnnncatgtatacttatatacagatacatctcaatcataatgtta 352  Q
    ||||||||||||||||||||||   ||||||||||||||||||||| ||| |       | |||||||||||||||||||||||||||    ||||||||    
T  31916977 cacaacaacaataacgacagttattgtgttacaattatatttacaggtctca-------cctgtatacttatatacagatacatctca----taatgtta 31917065  T
Q  353 taccaaaaattatatacatccca--gaaaatgatgaaattaa 392  Q
    ||||||||| |||||||||||||   ||||||||||||||||    
T  31917066 taccaaaaaatatatacatcccatgcaaaatgatgaaattaa 31917107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 256 - 392
Target Start/End: Original strand, 31972904 - 31973034
Alignment:
Q  256 cacaacaacaataacgacagtt---gtgttacaattatatttacagttcttannnnnnncatgtatacttatatacagatacatctcaatcataatgtta 352  Q
    ||||||||||||||||||||||   ||||||||||||||||||||| ||| |       | |||||||||||||||||||||||||||    ||||||||    
T  31972904 cacaacaacaataacgacagttattgtgttacaattatatttacaggtctca-------cctgtatacttatatacagatacatctca----taatgtta 31972992  T
Q  353 taccaaaaattatatacatccca--gaaaatgatgaaattaa 392  Q
    ||||||||| |||||||||||||   ||||||||||||||||    
T  31972993 taccaaaaaatatatacatcccatgcaaaatgatgaaattaa 31973034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 72 - 115
Target Start/End: Original strand, 31976184 - 31976227
Alignment:
Q  72 ttattctttcacacactctcccacatttccttctctcttagagc 115  Q
    ||||||||||| |||||||||||||||||||||||| |||||||    
T  31976184 ttattctttcagacactctcccacatttccttctcttttagagc 31976227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 18052749 - 18052712
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    |||||||||| |||||||||||||||||||||||||||    
T  18052749 ttttctaaagcgacatacaatttaggacggaggaagta 18052712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 34491927 - 34491964
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  34491927 ttttctaaagtgacatacaatttgggacggaggaagta 34491964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 10555340 - 10555380
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtataa 41  Q
    ||||||||||||||||||||||| ||||||||| |||||||    
T  10555340 ttttctaaagtgacatacaatttgggacggagggagtataa 10555380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 30088842 - 30088886
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtataattta 45  Q
    ||||||||||||||||||||||| ||||||||| ||||| |||||    
T  30088842 ttttctaaagtgacatacaatttgggacggagggagtattattta 30088886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 42507780 - 42507820
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtataa 41  Q
    ||||||||||||||||||||||| ||||||||| |||||||    
T  42507780 ttttctaaagtgacatacaatttgggacggagggagtataa 42507820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 48380610 - 48380566
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtataattta 45  Q
    ||||||||||||||||||||||| ||||||||| ||||| |||||    
T  48380610 ttttctaaagtgacatacaatttgggacggagggagtattattta 48380566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 388081 - 388042
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtata 40  Q
    ||||| ||||||||||||||||| ||||||||||||||||    
T  388081 ttttccaaagtgacatacaatttgggacggaggaagtata 388042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 37 - 68
Target Start/End: Original strand, 31975113 - 31975144
Alignment:
Q  37 tataatttagtatctcaaccaacatctgaaaa 68  Q
    ||||||||||||||||||||||||||||||||    
T  31975113 tataatttagtatctcaaccaacatctgaaaa 31975144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 1607033 - 1607071
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtat 39  Q
    |||||||||| ||||||||||||||||| ||||||||||    
T  1607033 ttttctaaagcgacatacaatttaggacagaggaagtat 1607071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 4294173 - 4294211
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtat 39  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  4294173 ttttctaaagtgacatacaatttgggacggagggagtat 4294211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 5388195 - 5388157
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtat 39  Q
    ||||||||||| ||||||||||||||||||||| |||||    
T  5388195 ttttctaaagtaacatacaatttaggacggagggagtat 5388157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 23621675 - 23621637
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtat 39  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  23621675 ttttctaaagtgacatacaatttgggacggagggagtat 23621637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 27383678 - 27383720
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtataatt 43  Q
    ||||||||||| ||||||||||| ||||||||| |||||||||    
T  27383678 ttttctaaagttacatacaatttgggacggagggagtataatt 27383720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 31648578 - 31648616
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtat 39  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  31648578 ttttctaaagtgacatacaatttgggacggagggagtat 31648616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 34016804 - 34016766
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtat 39  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  34016804 ttttctaaagtgacatacaatttgggacggagggagtat 34016766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 49236003 - 49236041
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtat 39  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  49236003 ttttctaaagtgacatacaatttgggacggagggagtat 49236041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 51817188 - 51817226
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtat 39  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  51817188 ttttctaaagtgacatacaatttgggacggagggagtat 51817226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 52397935 - 52397973
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtat 39  Q
    |||||||||| |||||||||||||||| |||||||||||    
T  52397935 ttttctaaagcgacatacaatttaggatggaggaagtat 52397973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 55968578 - 55968540
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtat 39  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  55968578 ttttctaaagtgacatacaatttgggacggagggagtat 55968540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 55984358 - 55984396
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtat 39  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  55984358 ttttctaaagtgacatacaatttgggacggagggagtat 55984396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 2401256 - 2401219
Alignment:
Q  2 tttctaaagtgacatacaatttaggacggaggaagtat 39  Q
    |||||||||||||||||||||| ||||||||| |||||    
T  2401256 tttctaaagtgacatacaatttgggacggagggagtat 2401219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 7258153 - 7258190
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  7258153 ttttctaaagtgacatacaatttgggacggagggagta 7258190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 13880488 - 13880451
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  13880488 ttttctaaagtgacatacaatttgggacggagggagta 13880451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 22019127 - 22019090
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  22019127 ttttctaaagtgacatacaatttgggacggagggagta 22019090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 25771222 - 25771259
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  25771222 ttttctaaagtgacatacaatttgggacggagggagta 25771259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 32860863 - 32860900
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  32860863 ttttctaaagtgacatacaatttgggacggagggagta 32860900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 34447669 - 34447632
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  34447669 ttttctaaagtgacatacaatttgggacggagggagta 34447632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 35877087 - 35877124
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  35877087 ttttctaaagtgacatacaatttgggacggagggagta 35877124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 42179693 - 42179730
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  42179693 ttttctaaagtgacatacaatttgggacggagggagta 42179730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 50533805 - 50533768
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||||||||||||||||||||||| ||||||| ||||    
T  50533805 ttttctaaagtgacatacaatttagaacggagggagta 50533768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 56038660 - 56038697
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  56038660 ttttctaaagtgacatacaatttgggacggagggagta 56038697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 1788838 - 1788878
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtataa 41  Q
    |||||||||| |||||||||||| ||||||||| |||||||    
T  1788838 ttttctaaagcgacatacaatttgggacggagggagtataa 1788878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.000000000009; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 29619462 - 29619506
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtataattta 45  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||    
T  29619462 ttttctaaagtgacatacaatttgggacggagggagtataattta 29619506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 4890183 - 4890228
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtataatttag 46  Q
    ||||||||||||||||||||||||||||||| | ||||| ||||||    
T  4890183 ttttctaaagtgacatacaatttaggacggatggagtattatttag 4890228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 9201166 - 9201129
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  9201166 ttttctaaagtgacatacaatttaggacggagggagta 9201129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 21772896 - 21772933
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  21772896 ttttctaaagtgacatacaatttaggacggagggagta 21772933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 43359689 - 43359649
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtataa 41  Q
    |||| |||||||||||||||||||||||||||| |||||||    
T  43359689 ttttttaaagtgacatacaatttaggacggagggagtataa 43359649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 12360824 - 12360785
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtata 40  Q
    ||||||||||||||||||||||| ||||||||| ||||||    
T  12360824 ttttctaaagtgacatacaatttgggacggagggagtata 12360785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 34163159 - 34163120
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtata 40  Q
    ||||||||||||||||||||||| ||||||||| ||||||    
T  34163159 ttttctaaagtgacatacaatttgggacggagggagtata 34163120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 8883235 - 8883197
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtat 39  Q
    ||||||||||||| ||||||||| |||||||||||||||    
T  8883235 ttttctaaagtgagatacaatttgggacggaggaagtat 8883197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 13978469 - 13978499
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacgga 31  Q
    |||||||||||||||||||||||||||||||    
T  13978469 ttttctaaagtgacatacaatttaggacgga 13978499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 34382066 - 34382104
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtat 39  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  34382066 ttttctaaagtgacatacaatttgggacggagggagtat 34382104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 35869966 - 35869928
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtat 39  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  35869966 ttttctaaagtgacatacaatttgggacggagggagtat 35869928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 42940801 - 42940763
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtat 39  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  42940801 ttttctaaagtgacatacaatttgggacggagggagtat 42940763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 440089 - 440130
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtataat 42  Q
    ||||| |||| |||||||||||| ||||||||||||||||||    
T  440089 ttttccaaagcgacatacaatttgggacggaggaagtataat 440130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 4456430 - 4456393
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  4456430 ttttctaaagtgacatacaatttgggacggagggagta 4456393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 5378210 - 5378247
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  5378210 ttttctaaagtgacatacaatttgggacggagggagta 5378247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 7363342 - 7363379
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  7363342 ttttctaaagtgacatacaatttgggacggagggagta 7363379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 18094725 - 18094762
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||||||||||||||| ||||| ||||||||||||||    
T  18094725 ttttctaaagtgacatataatttgggacggaggaagta 18094762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 27187457 - 27187494
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||| ||||||||||||||||||||||||||| ||||    
T  27187457 ttttccaaagtgacatacaatttaggacggagggagta 27187494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 29816241 - 29816204
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  29816241 ttttctaaagtgacatacaatttgggacggagggagta 29816204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 8225645 - 8225613
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggagg 33  Q
    ||||||||||||||||||||||| |||||||||    
T  8225645 ttttctaaagtgacatacaatttgggacggagg 8225613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 9591387 - 9591351
Alignment:
Q  5 ctaaagtgacatacaatttaggacggaggaagtataa 41  Q
    |||||| |||||| |||||||||||||||||||||||    
T  9591387 ctaaagcgacatagaatttaggacggaggaagtataa 9591351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 35080304 - 35080272
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggagg 33  Q
    |||| ||||||||||||||||||||||||||||    
T  35080304 ttttttaaagtgacatacaatttaggacggagg 35080272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 39
Target Start/End: Original strand, 41348984 - 41349016
Alignment:
Q  7 aaagtgacatacaatttaggacggaggaagtat 39  Q
    |||| ||||||||||||||||||||||||||||    
T  41348984 aaagcgacatacaatttaggacggaggaagtat 41349016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000004; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 19715264 - 19715221
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtataattt 44  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||    
T  19715264 ttttctaaagtgacatacaatttgggacggagggagtataattt 19715221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 23597298 - 23597252
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtataatttagt 47  Q
    ||||||||||||||||||||||| ||||||||| ||||| |||||||    
T  23597298 ttttctaaagtgacatacaatttgggacggagggagtattatttagt 23597252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 23606220 - 23606174
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtataatttagt 47  Q
    ||||||||||||||||||||||| ||||||||| ||||| |||||||    
T  23606220 ttttctaaagtgacatacaatttgggacggagggagtattatttagt 23606174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 41
Target Start/End: Original strand, 38367650 - 38367688
Alignment:
Q  3 ttctaaagtgacatacaatttaggacggaggaagtataa 41  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  38367650 ttctaaagtgacatacaatttaggacggagggagtataa 38367688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 18673405 - 18673368
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  18673405 ttttctaaagtgacatacaatttaggacggagggagta 18673368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 16872605 - 16872645
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtataa 41  Q
    ||||||||||||||||||||||| ||||||||| |||||||    
T  16872605 ttttctaaagtgacatacaatttgggacggagggagtataa 16872645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 24333045 - 24333013
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggagg 33  Q
    |||||||||||||||||||||||||||||||||    
T  24333045 ttttctaaagtgacatacaatttaggacggagg 24333013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 42192471 - 42192511
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtataa 41  Q
    ||||||||||||| ||||||||| |||||||||||||||||    
T  42192471 ttttctaaagtgatatacaatttgggacggaggaagtataa 42192511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 29938327 - 29938288
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtata 40  Q
    ||||||||||||||||||||||| ||||||||| ||||||    
T  29938327 ttttctaaagtgacatacaatttgggacggagggagtata 29938288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 37954722 - 37954753
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggag 32  Q
    ||||||||||||||||||||||||||||||||    
T  37954722 ttttctaaagtgacatacaatttaggacggag 37954753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 37965081 - 37965112
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggag 32  Q
    ||||||||||||||||||||||||||||||||    
T  37965081 ttttctaaagtgacatacaatttaggacggag 37965112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 8378334 - 8378372
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtat 39  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  8378334 ttttctaaagtgacatacaatttgggacggagggagtat 8378372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 22578242 - 22578204
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtat 39  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  22578242 ttttctaaagtgacatacaatttgggacggagggagtat 22578204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 31231119 - 31231157
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtat 39  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  31231119 ttttctaaagtgacatacaattttggacggagggagtat 31231157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 31873664 - 31873702
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtat 39  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  31873664 ttttctaaagtgacatacaatttgggacggagggagtat 31873702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 37664979 - 37665017
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtat 39  Q
    ||||||||| ||||||||||||||||||||| |||||||    
T  37664979 ttttctaaaatgacatacaatttaggacggaagaagtat 37665017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 38896703 - 38896741
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtat 39  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  38896703 ttttctaaagtgacatacaatttgggacggagggagtat 38896741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 42373251 - 42373289
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtat 39  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  42373251 ttttctaaagtgacatacaatttgggacggagggagtat 42373289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 899607 - 899640
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggagga 34  Q
    |||||||||| |||||||||||||||||||||||    
T  899607 ttttctaaagcgacatacaatttaggacggagga 899640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 1042407 - 1042370
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  1042407 ttttctaaagtgacatataatttaggacggagggagta 1042370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 5830979 - 5830942
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  5830979 ttttctaaagtgacatacaatttgggacggagggagta 5830942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 6878549 - 6878512
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  6878549 ttttctaaagtgacatacaatttgggacggagggagta 6878512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 12000517 - 12000480
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  12000517 ttttctaaagtgacatacaatttgggacggagggagta 12000480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 14433393 - 14433430
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  14433393 ttttctaaagtgacatacaatttgggacggagggagta 14433430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 20091220 - 20091257
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  20091220 ttttctaaagtgacatacaatttgggacggagggagta 20091257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 23897717 - 23897680
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||| |||| |||||||||||||||||||||||||||    
T  23897717 ttttccaaagcgacatacaatttaggacggaggaagta 23897680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 25838717 - 25838758
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtataat 42  Q
    ||||||||| ||||||||||||| ||||||||| ||||||||    
T  25838717 ttttctaaaatgacatacaatttgggacggagggagtataat 25838758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 28074506 - 28074543
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  28074506 ttttctaaagtgacatacaatttgggacggagggagta 28074543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 30526194 - 30526157
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||||||| ||||||||||||||||||||||| ||||    
T  30526194 ttttctaaaatgacatacaatttaggacggagggagta 30526157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 35544237 - 35544274
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  35544237 ttttctaaagtgacatacaatttgggacggagggagta 35544274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 35631064 - 35631027
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  35631064 ttttctaaagtgacatacaatttgggacggagggagta 35631027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 39284233 - 39284196
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  39284233 ttttctaaagtgacatacaatttgggacggagggagta 39284196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 42946664 - 42946701
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  42946664 ttttctaaagtgacatacaatttgggacggagggagta 42946701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 7884533 - 7884573
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtataa 41  Q
    ||||| |||| |||||||||||||||||||||| |||||||    
T  7884533 ttttccaaagcgacatacaatttaggacggagggagtataa 7884573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 32395281 - 32395325
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtataattta 45  Q
    ||||||||||||||||||| ||| ||||||||| ||||| |||||    
T  32395281 ttttctaaagtgacatacattttgggacggagggagtattattta 32395325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 37163778 - 37163818
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtataa 41  Q
    |||||||||| |||||||||||| ||||||||| |||||||    
T  37163778 ttttctaaagcgacatacaatttgggacggagggagtataa 37163818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000004; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 8611850 - 8611807
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtataattt 44  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||    
T  8611850 ttttctaaagtgacatacaatttgggacggaggaagtattattt 8611807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 25651231 - 25651269
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtat 39  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  25651231 ttttctaaagtgacatacaatttaggacggagggagtat 25651269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 37115767 - 37115729
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtat 39  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  37115767 ttttctaaagtgacatacaatttaggacggagggagtat 37115729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 40768721 - 40768759
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtat 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  40768721 ttttctaaagtgacatacaatttgggacggaggaagtat 40768759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 5528421 - 5528384
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  5528421 ttttctaaagtgacatacaatttgggacggaggaagta 5528384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 22624351 - 22624310
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtataat 42  Q
    ||||||||||||||||||||||| |||||||| |||||||||    
T  22624351 ttttctaaagtgacatacaatttgggacggagtaagtataat 22624310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 45823203 - 45823243
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtataa 41  Q
    ||||||||||||||||||||||| ||||||||| |||||||    
T  45823203 ttttctaaagtgacatacaatttgggacggagggagtataa 45823243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 24924416 - 24924455
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtata 40  Q
    ||||||||||||||||||||||| ||||||||| ||||||    
T  24924416 ttttctaaagtgacatacaatttgggacggagggagtata 24924455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 45780894 - 45780933
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtata 40  Q
    ||||||||||||||||||||||| ||||||||| ||||||    
T  45780894 ttttctaaagtgacatacaatttgggacggagggagtata 45780933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 1643750 - 1643788
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtat 39  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  1643750 ttttctaaagtgacatacaatttgggacggagggagtat 1643788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 10453152 - 10453190
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtat 39  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  10453152 ttttctaaagtgacatacaatttgggacggagggagtat 10453190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 22918210 - 22918172
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtat 39  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  22918210 ttttctaaagtgacatacaatttgggacggagggagtat 22918172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 23059107 - 23059069
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtat 39  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  23059107 ttttctaaagtgacatacaatttgggacggagggagtat 23059069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 46373247 - 46373285
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtat 39  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  46373247 ttttctaaagtgacatacaatttgggacggagggagtat 46373285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 4513604 - 4513641
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  4513604 ttttctaaagtgacatacaatttgggacggagggagta 4513641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 9818119 - 9818082
Alignment:
Q  3 ttctaaagtgacatacaatttaggacggaggaagtata 40  Q
    ||||||||||||||||||||| ||||||||| ||||||    
T  9818119 ttctaaagtgacatacaatttgggacggagggagtata 9818082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 10720044 - 10720007
Alignment:
Q  3 ttctaaagtgacatacaatttaggacggaggaagtata 40  Q
    ||||||||||||||||||||| ||||||||| ||||||    
T  10720044 ttctaaagtgacatacaatttgggacggagggagtata 10720007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 13439354 - 13439317
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  13439354 ttttctaaagtgacatacaatttgggacggagggagta 13439317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 24685672 - 24685709
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  24685672 ttttctaaagtgacatacaatttgggacggagggagta 24685709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 41
Target Start/End: Original strand, 32827872 - 32827905
Alignment:
Q  8 aagtgacatacaatttaggacggaggaagtataa 41  Q
    |||||||||||||||||||||||||| |||||||    
T  32827872 aagtgacatacaatttaggacggagggagtataa 32827905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 35421859 - 35421896
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  35421859 ttttctaaagtgacatacaatttgggacggagggagta 35421896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 44481023 - 44480986
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  44481023 ttttctaaagtgacatacaatttgggacggagggagta 44480986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 44894818 - 44894855
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  44894818 ttttctaaagtgacatacaatttgggacggagggagta 44894855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 47578923 - 47578960
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  47578923 ttttctaaagtgacatacaatttgggacggagggagta 47578960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 23726620 - 23726652
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggagg 33  Q
    ||||||||||||||||||||||| |||||||||    
T  23726620 ttttctaaagtgacatacaatttgggacggagg 23726652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 25547954 - 25547998
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtataattta 45  Q
    ||||||||| ||||||| ||||| ||||||||| |||||||||||    
T  25547954 ttttctaaaatgacataaaatttgggacggagggagtataattta 25547998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 40
Target Start/End: Original strand, 28472319 - 28472351
Alignment:
Q  8 aagtgacatacaatttaggacggaggaagtata 40  Q
    |||||||||||||||||||||||||| ||||||    
T  28472319 aagtgacatacaatttaggacggagggagtata 28472351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000004; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 5137716 - 5137759
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtataattt 44  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  5137716 ttttctaaagtgatatacaatttgggacggaggaagtataattt 5137759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 48910584 - 48910627
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtataattt 44  Q
    |||| |||||||||||||||||||||||||||||||||| ||||    
T  48910584 ttttttaaagtgacatacaatttaggacggaggaagtatcattt 48910627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 42490078 - 42490040
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtat 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  42490078 ttttctaaagtgacatacaatttgggacggaggaagtat 42490040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 46195872 - 46195910
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtat 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  46195872 ttttctaaagtgacatacaatttgggacggaggaagtat 46195910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 4392576 - 4392613
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    |||||||||| |||||||||||||||||||||||||||    
T  4392576 ttttctaaagcgacatacaatttaggacggaggaagta 4392613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 27942259 - 27942296
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  27942259 ttttctaaagtgacatacaatttaggacggagggagta 27942296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 47241199 - 47241162
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  47241199 ttttctaaagtgacatacaatttaggacggagggagta 47241162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 43599607 - 43599567
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtataa 41  Q
    ||||||||||||||||||||||| ||||||||| |||||||    
T  43599607 ttttctaaagtgacatacaatttgggacggagggagtataa 43599567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 19961070 - 19961109
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtata 40  Q
    ||||||||||||||||||||||| ||||||||| ||||||    
T  19961070 ttttctaaagtgacatacaatttgggacggagggagtata 19961109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 25904153 - 25904192
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtata 40  Q
    ||||||||||||||||||||||| ||||||||| ||||||    
T  25904153 ttttctaaagtgacatacaatttgggacggagggagtata 25904192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 29652030 - 29651991
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtata 40  Q
    ||||||||||||||||||||||| ||||||||| ||||||    
T  29652030 ttttctaaagtgacatacaatttgggacggagggagtata 29651991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 30744889 - 30744850
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtata 40  Q
    |||||||||||||||||||||||  |||||||||||||||    
T  30744889 ttttctaaagtgacatacaatttgagacggaggaagtata 30744850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 52060516 - 52060555
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtata 40  Q
    ||||||||||||||||||||||| ||||||||| ||||||    
T  52060516 ttttctaaagtgacatacaatttgggacggagggagtata 52060555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 240718 - 240756
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtat 39  Q
    ||||||||||||||||||||||| | |||||||||||||    
T  240718 ttttctaaagtgacatacaatttggaacggaggaagtat 240756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 3671625 - 3671663
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtat 39  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  3671625 ttttctaaagtgacatacaatttgggacggagggagtat 3671663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 38783686 - 38783724
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtat 39  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  38783686 ttttctaaagtgacatacaatttgggacggagggagtat 38783724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 42939820 - 42939858
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtat 39  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  42939820 ttttctaaagtgacatacaatttgggacggaggtagtat 42939858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 43175771 - 43175733
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtat 39  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  43175771 ttttctaaagtgacatacaatttgggacggagggagtat 43175733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 45824130 - 45824168
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtat 39  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  45824130 ttttctaaagtgacatacaatttgggacggagggagtat 45824168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 15019815 - 15019778
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||||||| ||||||||||||| ||||||||||||||    
T  15019815 ttttctaaaatgacatacaatttgggacggaggaagta 15019778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 24089365 - 24089328
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  24089365 ttttctaaagtgacatacaatttgggacggagggagta 24089328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 24978866 - 24978829
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  24978866 ttttctaaagtgacatacaatttgggacggagggagta 24978829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 28227008 - 28226971
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  28227008 ttttctaaagtgacatacaatttgggacggagggagta 28226971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 34663467 - 34663430
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  34663467 ttttctaaagtgacatacaatttgggacggagggagta 34663430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 41751138 - 41751101
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  41751138 ttttctaaagtgacatacaatttgggacggagggagta 41751101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 44048135 - 44048098
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  44048135 ttttctaaagtgacatacaatttgggacggagggagta 44048098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 48333747 - 48333710
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  48333747 ttttctaaagtgacatacaatttgggacggagggagta 48333710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 51865726 - 51865689
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  51865726 ttttctaaagtgacatacaatttgggacggagggagta 51865689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 3645950 - 3645990
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtataa 41  Q
    ||||||||||||||||||||||| ||||||| | |||||||    
T  3645950 ttttctaaagtgacatacaatttgggacggaaggagtataa 3645990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 3835287 - 3835259
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacg 29  Q
    |||||||||||||||||||||||||||||    
T  3835287 ttttctaaagtgacatacaatttaggacg 3835259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 49610191 - 49610235
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtataattta 45  Q
    |||||||||| |||||||||||| ||||||||| ||||| |||||    
T  49610191 ttttctaaagcgacatacaatttgggacggagggagtatgattta 49610235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 54080355 - 54080387
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggagg 33  Q
    ||||||||||||||||||||||| |||||||||    
T  54080355 ttttctaaagtgacatacaatttgggacggagg 54080387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 36; Significance: 0.00000000004; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 2994172 - 2994133
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtata 40  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  2994172 ttttctaaagtgacatacaatttgggacggaggaagtata 2994133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 3552804 - 3552844
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtataa 41  Q
    ||||||||||||||||||||||| ||||||||| |||||||    
T  3552804 ttttctaaagtgacatacaatttgggacggagggagtataa 3552844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 29095284 - 29095252
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggagg 33  Q
    |||||||||||||||||||||||||||||||||    
T  29095284 ttttctaaagtgacatacaatttaggacggagg 29095252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 6920974 - 6921013
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtata 40  Q
    ||||||||||||||||||||||| ||||||||| ||||||    
T  6920974 ttttctaaagtgacatacaatttgggacggagggagtata 6921013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 42
Target Start/End: Complemental strand, 16436090 - 16436051
Alignment:
Q  3 ttctaaagtgacatacaatttaggacggaggaagtataat 42  Q
    ||||||||||||||||||||| ||||||||| ||||||||    
T  16436090 ttctaaagtgacatacaatttgggacggagggagtataat 16436051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 24589535 - 24589496
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtata 40  Q
    ||||||||||||||||||||||| ||||||||| ||||||    
T  24589535 ttttctaaagtgacatacaatttgggacggagggagtata 24589496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 38238903 - 38238864
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtata 40  Q
    ||||||||||||||||||||||| ||||||||| ||||||    
T  38238903 ttttctaaagtgacatacaatttgggacggagggagtata 38238864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 41529146 - 41529103
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtataattt 44  Q
    ||||||||||||||||||||||| ||||||||| ||||| ||||    
T  41529146 ttttctaaagtgacatacaatttgggacggagggagtattattt 41529103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 49251809 - 49251848
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtata 40  Q
    ||||||||||||||||||||||| ||||||||| ||||||    
T  49251809 ttttctaaagtgacatacaatttgggacggagggagtata 49251848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 50942656 - 50942617
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtata 40  Q
    ||||||||||||||||||||||| ||||||||| ||||||    
T  50942656 ttttctaaagtgacatacaatttgggacggagggagtata 50942617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 18127371 - 18127333
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtat 39  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  18127371 ttttctaaagtgacatacaatttgggacggagggagtat 18127333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 24583866 - 24583828
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtat 39  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  24583866 ttttctaaagtgacatacaatttgggacggagggagtat 24583828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 51984004 - 51984046
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtataatt 43  Q
    ||||||||||||||||||||||| ||||||| | |||||||||    
T  51984004 ttttctaaagtgacatacaatttgggacggaaggagtataatt 51984046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 4226276 - 4226239
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  4226276 ttttctaaagtgacatacaatttgggacggagggagta 4226239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 4750444 - 4750481
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  4750444 ttttctaaagtgacatacaatttgggacggagggagta 4750481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 8712122 - 8712159
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  8712122 ttttctaaagtgacatacaatttgggacggagggagta 8712159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 29361488 - 29361529
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtataat 42  Q
    ||||||||| ||||||||||||| ||||||||| ||||||||    
T  29361488 ttttctaaaatgacatacaatttgggacggagggagtataat 29361529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 29672340 - 29672303
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  29672340 ttttctaaagtgacatacaatttgggacggagggagta 29672303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 39282569 - 39282532
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  39282569 ttttctaaagtgacatacaatttgggacggagggagta 39282532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 52833636 - 52833599
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||||||| |||||||||||||||||||||| |||||    
T  52833636 ttttctaaaatgacatacaatttaggacggagaaagta 52833599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 16010951 - 16010915
Alignment:
Q  3 ttctaaagtgacatacaatttaggacggaggaagtat 39  Q
    ||||||||||||||||||||| ||||||||| |||||    
T  16010951 ttctaaagtgacatacaatttgggacggagggagtat 16010915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 34347308 - 34347276
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggagg 33  Q
    ||||||||||||||||||||||| |||||||||    
T  34347308 ttttctaaagtgacatacaatttgggacggagg 34347276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 34967575 - 34967615
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtataa 41  Q
    ||||||||||| ||||||||||| ||||||||| |||||||    
T  34967575 ttttctaaagtaacatacaatttgggacggagggagtataa 34967615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 42643145 - 42643113
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggagg 33  Q
    ||||||||||||||||||||||| |||||||||    
T  42643145 ttttctaaagtgacatacaatttgggacggagg 42643113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 38
Target Start/End: Original strand, 46569169 - 46569205
Alignment:
Q  2 tttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||||||||||||||||| |||||||||||| ||||    
T  46569169 tttctaaagtgacatacaacttaggacggagggagta 46569205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1515 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1515
Description:

Target: scaffold1515; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 1482 - 1444
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtat 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  1482 ttttctaaagtgacatacaatttgggacggaggaagtat 1444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.0000000006; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 12499715 - 12499752
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  12499715 ttttctaaagtgacatacaatttaggacggagggagta 12499752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 12507044 - 12507081
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  12507044 ttttctaaagtgacatacaatttaggacggagggagta 12507081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 12509186 - 12509149
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  12509186 ttttctaaagtgacatacaatttaggacggagggagta 12509149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 1228248 - 1228284
Alignment:
Q  3 ttctaaagtgacatacaatttaggacggaggaagtat 39  Q
    ||||||||||||||||||||||||||||||| |||||    
T  1228248 ttctaaagtgacatacaatttaggacggagggagtat 1228284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 6335159 - 6335199
Alignment:
Q  6 taaagtgacatacaatttaggacggaggaagtataatttag 46  Q
    ||||| |||||||||||| ||||||||||||||||||||||    
T  6335159 taaagcgacatacaatttgggacggaggaagtataatttag 6335199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 10364716 - 10364756
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtataa 41  Q
    ||||||||||||||||||||||| ||||||||| |||||||    
T  10364716 ttttctaaagtgacatacaatttgggacggagggagtataa 10364756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 1228432 - 1228389
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtataattt 44  Q
    |||||||||||||||||||||||| |||||||| |||| |||||    
T  1228432 ttttctaaagtgacatacaatttaagacggagggagtacaattt 1228389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 2603640 - 2603678
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtat 39  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  2603640 ttttctaaagtgacatacaatttgggacggagggagtat 2603678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 6835749 - 6835711
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtat 39  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  6835749 ttttctaaagtgacatacaatttgggacggagggagtat 6835711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 8201497 - 8201459
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtat 39  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  8201497 ttttctaaagtgacatacaatttgggacggagggagtat 8201459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 15497878 - 15497840
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtat 39  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  15497878 ttttctaaagtgacatacaatttgggacggagggagtat 15497840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 17360636 - 17360606
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacgga 31  Q
    |||||||||||||||||||||||||||||||    
T  17360636 ttttctaaagtgacatacaatttaggacgga 17360606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 1352508 - 1352471
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  1352508 ttttctaaagtgacatacaatttgggacggagggagta 1352471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 9461610 - 9461573
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  9461610 ttttctaaagtgacatacaatttgggacggagggagta 9461573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 9961352 - 9961315
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  9961352 ttttctaaagtgacatacaatttgggacggagggagta 9961315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 11172922 - 11172885
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  11172922 ttttctaaagtgacatacaatttgggacggagggagta 11172885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 14499145 - 14499108
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||||||||||||||||||||| |||||||| |||||    
T  14499145 ttttctaaagtgacatacaatttgggacggagaaagta 14499108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 31022630 - 31022671
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtataat 42  Q
    ||||| |||| |||||||||||||||||||||| ||||||||    
T  31022630 ttttccaaagcgacatacaatttaggacggagggagtataat 31022671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 9660470 - 9660502
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggagg 33  Q
    ||||||||||||||||||||||| |||||||||    
T  9660470 ttttctaaagtgacatacaatttgggacggagg 9660502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 10629561 - 10629605
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtataattta 45  Q
    ||||| |||| |||||||||||| ||||||||| |||||||||||    
T  10629561 ttttccaaagcgacatacaatttgggacggagggagtataattta 10629605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 34; Significance: 0.0000000006; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 28206652 - 28206689
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  28206652 ttttctaaagtgacatacaatttaggacggagggagta 28206689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 40171867 - 40171830
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  40171867 ttttctaaagtgacatacaatttgggacggaggaagta 40171830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 41186819 - 41186787
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggagg 33  Q
    |||||||||||||||||||||||||||||||||    
T  41186819 ttttctaaagtgacatacaatttaggacggagg 41186787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 325376 - 325415
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtata 40  Q
    ||||||||||||||||||||||| ||||||||| ||||||    
T  325376 ttttctaaagtgacatacaatttgggacggagggagtata 325415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 3628629 - 3628668
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtata 40  Q
    ||||||||||||||||||||||| ||||||||| ||||||    
T  3628629 ttttctaaagtgacatacaatttgggacggagggagtata 3628668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 36443550 - 36443511
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtata 40  Q
    ||||||||||||||||||||||| ||||||||| ||||||    
T  36443550 ttttctaaagtgacatacaatttgggacggagggagtata 36443511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 6027094 - 6027140
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtataatttagt 47  Q
    |||||||||| |||||||||||| ||||||||| |||| ||||||||    
T  6027094 ttttctaaagcgacatacaatttgggacggagggagtacaatttagt 6027140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 19002942 - 19002904
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtat 39  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  19002942 ttttctaaagtgacatacaatttgggacggagggagtat 19002904  T

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Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 22061016 - 22060978
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtat 39  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  22061016 ttttctaaagtgacatacaatttgggacggagggagtat 22060978  T

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Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 34036134 - 34036096
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtat 39  Q
    |||| |||||||||||||||||||||||||||| |||||    
T  34036134 ttttttaaagtgacatacaatttaggacggagggagtat 34036096  T

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Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 39407813 - 39407775
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtat 39  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  39407813 ttttctaaagtgacatacaatttgggacggagggagtat 39407775  T

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Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 39927735 - 39927773
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtat 39  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  39927735 ttttctaaagtgacatacaatttgggacggagggagtat 39927773  T

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Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 40833505 - 40833467
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagtat 39  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  40833505 ttttctaaagtgacatacaatttgggacggagggagtat 40833467  T

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Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 13375348 - 13375311
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  13375348 ttttctaaagtgacatacaatttgggacggagggagta 13375311  T

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Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 14527786 - 14527749
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  14527786 ttttctaaagtgacatacaatttgggacggagggagta 14527749  T

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Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 14943508 - 14943545
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  14943508 ttttctaaagtgacatacaatttgggacggagggagta 14943545  T

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Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 28786968 - 28787005
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  28786968 ttttctaaagtgacatacaatttgggacggagggagta 28787005  T

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Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 39235227 - 39235260
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggagga 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  39235227 ttttctaaagtgacatacaatttgggacggagga 39235260  T

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Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 40171782 - 40171819
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  40171782 ttttctaaagtgacatacaatttgggacggagggagta 40171819  T

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Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 42056073 - 42056036
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  42056073 ttttctaaagtgacatacaatttgggacggagggagta 42056036  T

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Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 10877341 - 10877309
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggagg 33  Q
    ||||||||||||||||||||||| |||||||||    
T  10877341 ttttctaaagtgacatacaatttgggacggagg 10877309  T

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Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 31909824 - 31909860
Alignment:
Q  3 ttctaaagtgacatacaatttaggacggaggaagtat 39  Q
    ||||||||||||||||||||| ||||||||| |||||    
T  31909824 ttctaaagtgacatacaatttgggacggagggagtat 31909860  T

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Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 35669723 - 35669691
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggagg 33  Q
    ||||||||||||||||||||||| |||||||||    
T  35669723 ttttctaaagtgacatacaatttgggacggagg 35669691  T

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Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 44653675 - 44653707
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggagg 33  Q
    ||||||||||||||||||||||| |||||||||    
T  44653675 ttttctaaagtgacatacaatttgggacggagg 44653707  T

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Target: scaffold0160 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 26005 - 26042
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  26005 ttttctaaagtgacatacaatttgggacggagggagta 26042  T

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Target: scaffold0037 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 98899 - 98862
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggaggaagta 38  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  98899 ttttctaaagtgacatacaatttgggacggagggagta 98862  T

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Target: scaffold0427 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 5268 - 5236
Alignment:
Q  1 ttttctaaagtgacatacaatttaggacggagg 33  Q
    ||||||||||||||||| |||||||||||||||    
T  5268 ttttctaaagtgacatataatttaggacggagg 5236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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