View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16822_low_7 (Length: 209)

Name: NF16822_low_7
Description: NF16822
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16822_low_7
NF16822_low_7
[»] chr4 (54 HSPs)
chr4 (21-101)||(21711614-21711694)
chr4 (24-101)||(1042833-1042910)
chr4 (24-101)||(22436995-22437072)
chr4 (21-100)||(17211351-17211430)
chr4 (24-101)||(43889545-43889622)
chr4 (21-101)||(957498-957578)
chr4 (24-100)||(4785468-4785544)
chr4 (24-100)||(47657401-47657477)
chr4 (24-101)||(242462-242539)
chr4 (44-101)||(2773093-2773150)
chr4 (24-101)||(6282369-6282446)
chr4 (24-101)||(14330740-14330817)
chr4 (24-101)||(25762682-25762759)
chr4 (24-101)||(40353819-40353896)
chr4 (24-101)||(41794608-41794685)
chr4 (24-101)||(49791982-49792059)
chr4 (24-101)||(51027813-51027890)
chr4 (24-101)||(51428238-51428315)
chr4 (24-100)||(26591731-26591807)
chr4 (24-100)||(49094830-49094906)
chr4 (24-101)||(37866490-37866568)
chr4 (24-101)||(1226243-1226320)
chr4 (24-101)||(6177361-6177438)
chr4 (44-101)||(10312356-10312413)
chr4 (24-101)||(11288379-11288456)
chr4 (24-101)||(20778915-20778992)
chr4 (24-101)||(21017223-21017300)
chr4 (24-101)||(27759411-27759488)
chr4 (24-101)||(34153332-34153409)
chr4 (24-101)||(34529842-34529919)
chr4 (24-101)||(39589013-39589090)
chr4 (24-101)||(55796827-55796904)
chr4 (24-101)||(56138994-56139071)
chr4 (24-95)||(45939615-45939686)
chr4 (24-101)||(31824675-31824752)
chr4 (24-101)||(32937948-32938025)
chr4 (24-101)||(33163590-33163667)
chr4 (24-101)||(36776565-36776642)
chr4 (47-100)||(46816592-46816645)
chr4 (24-101)||(49064063-49064140)
chr4 (24-101)||(49423804-49423881)
chr4 (24-101)||(49817690-49817767)
chr4 (24-101)||(3393388-3393465)
chr4 (44-101)||(20901734-20901791)
chr4 (24-93)||(21169543-21169612)
chr4 (24-101)||(44560226-44560303)
chr4 (24-98)||(18412682-18412756)
chr4 (48-97)||(13850837-13850886)
chr4 (24-101)||(24606836-24606913)
chr4 (24-101)||(9489763-9489839)
chr4 (48-97)||(13866351-13866400)
chr4 (24-101)||(42886350-42886427)
chr4 (47-101)||(28082322-28082376)
chr4 (48-97)||(31324262-31324311)
[»] chr1 (53 HSPs)
chr1 (21-101)||(39224239-39224319)
chr1 (24-101)||(17697130-17697207)
chr1 (24-101)||(36909645-36909722)
chr1 (26-101)||(35586976-35587051)
chr1 (24-101)||(14173803-14173880)
chr1 (24-101)||(24270408-24270485)
chr1 (24-101)||(27486735-27486812)
chr1 (24-101)||(39856951-39857028)
chr1 (24-101)||(45689203-45689280)
chr1 (24-101)||(48568449-48568526)
chr1 (24-101)||(49396788-49396865)
chr1 (18-101)||(29762260-29762343)
chr1 (24-101)||(35576423-35576500)
chr1 (24-101)||(37778163-37778240)
chr1 (24-101)||(42571821-42571898)
chr1 (24-101)||(44337364-44337441)
chr1 (24-101)||(49427471-49427548)
chr1 (24-101)||(49926425-49926502)
chr1 (24-101)||(51269886-51269963)
chr1 (24-100)||(50068304-50068380)
chr1 (26-101)||(13973008-13973083)
chr1 (25-99)||(49598921-49598995)
chr1 (24-101)||(17686406-17686483)
chr1 (24-101)||(18842523-18842600)
chr1 (24-101)||(21484688-21484765)
chr1 (24-101)||(29436057-29436134)
chr1 (21-101)||(41874926-41875006)
chr1 (24-101)||(12791318-12791395)
chr1 (44-101)||(13635362-13635419)
chr1 (32-101)||(18170109-18170178)
chr1 (24-101)||(35526222-35526299)
chr1 (24-101)||(38046479-38046556)
chr1 (24-101)||(49263033-49263110)
chr1 (24-100)||(3658558-3658634)
chr1 (26-101)||(35185054-35185130)
chr1 (26-101)||(6435856-6435931)
chr1 (26-101)||(46180327-46180402)
chr1 (24-101)||(27035363-27035440)
chr1 (24-101)||(44597785-44597862)
chr1 (24-101)||(47488082-47488159)
chr1 (34-101)||(19160401-19160468)
chr1 (26-100)||(5765291-5765365)
chr1 (24-101)||(13283789-13283866)
chr1 (32-101)||(23342725-23342794)
chr1 (24-101)||(41780777-41780854)
chr1 (24-101)||(48215282-48215359)
chr1 (54-101)||(13148403-13148450)
chr1 (39-101)||(30309886-30309948)
chr1 (24-101)||(17372811-17372888)
chr1 (45-101)||(24363866-24363922)
chr1 (24-87)||(16081383-16081446)
chr1 (21-59)||(29707583-29707621)
chr1 (24-69)||(40533331-40533376)
[»] scaffold0176 (1 HSPs)
scaffold0176 (24-101)||(1876-1953)
[»] chr8 (27 HSPs)
chr8 (24-101)||(26452419-26452496)
chr8 (24-101)||(43693231-43693308)
chr8 (24-101)||(44943124-44943201)
chr8 (25-101)||(42603548-42603624)
chr8 (24-101)||(15032367-15032444)
chr8 (24-101)||(33799594-33799671)
chr8 (24-101)||(34615047-34615124)
chr8 (24-101)||(38033968-38034045)
chr8 (24-101)||(41275488-41275565)
chr8 (24-101)||(41363750-41363827)
chr8 (24-101)||(41857017-41857094)
chr8 (24-101)||(42169003-42169080)
chr8 (32-101)||(18440346-18440415)
chr8 (24-101)||(40414704-40414781)
chr8 (24-101)||(40415351-40415428)
chr8 (24-101)||(40702454-40702531)
chr8 (25-101)||(2417009-2417085)
chr8 (24-100)||(19242205-19242281)
chr8 (24-100)||(19315389-19315465)
chr8 (24-101)||(43638720-43638797)
chr8 (46-101)||(26484671-26484726)
chr8 (24-101)||(485301-485378)
chr8 (24-101)||(24861437-24861514)
chr8 (24-101)||(28706185-28706262)
chr8 (46-87)||(3589331-3589372)
chr8 (50-101)||(16575786-16575837)
chr8 (18-76)||(31171853-31171911)
[»] chr7 (33 HSPs)
chr7 (24-101)||(34140951-34141028)
chr7 (24-101)||(48270734-48270811)
chr7 (21-101)||(39477281-39477361)
chr7 (18-101)||(47268984-47269067)
chr7 (24-101)||(17183298-17183375)
chr7 (24-101)||(21187343-21187420)
chr7 (24-101)||(36393868-36393945)
chr7 (24-101)||(41048869-41048946)
chr7 (24-101)||(48315224-48315301)
chr7 (24-100)||(28979066-28979142)
chr7 (24-101)||(20378747-20378824)
chr7 (24-101)||(41217700-41217777)
chr7 (27-101)||(30354862-30354936)
chr7 (24-101)||(9367164-9367241)
chr7 (24-101)||(15337949-15338026)
chr7 (24-101)||(20564845-20564922)
chr7 (24-101)||(42735348-42735425)
chr7 (24-101)||(43351144-43351220)
chr7 (24-95)||(2206081-2206152)
chr7 (34-101)||(17839409-17839476)
chr7 (24-101)||(21614804-21614881)
chr7 (48-101)||(26603273-26603326)
chr7 (24-101)||(40588635-40588712)
chr7 (32-101)||(46862246-46862315)
chr7 (24-101)||(1642631-1642708)
chr7 (24-101)||(18237650-18237727)
chr7 (24-101)||(21650610-21650687)
chr7 (24-101)||(28114437-28114514)
chr7 (24-101)||(30360603-30360679)
chr7 (50-101)||(45363313-45363364)
chr7 (24-101)||(48220788-48220863)
chr7 (24-100)||(2356376-2356452)
chr7 (44-101)||(10523154-10523212)
[»] chr3 (60 HSPs)
chr3 (24-101)||(34472120-34472197)
chr3 (24-101)||(34693334-34693411)
chr3 (24-101)||(51015375-51015452)
chr3 (24-101)||(2428585-2428662)
chr3 (24-101)||(13895914-13895991)
chr3 (24-101)||(44927561-44927638)
chr3 (24-101)||(46414378-46414455)
chr3 (24-101)||(49218780-49218857)
chr3 (24-101)||(55206928-55207005)
chr3 (21-101)||(19453270-19453350)
chr3 (21-101)||(27187046-27187126)
chr3 (25-101)||(37281550-37281626)
chr3 (24-100)||(45100509-45100585)
chr3 (24-100)||(46346656-46346732)
chr3 (24-101)||(24702316-24702393)
chr3 (24-101)||(34647311-34647388)
chr3 (24-101)||(39416992-39417069)
chr3 (24-101)||(42382369-42382446)
chr3 (24-101)||(42383149-42383226)
chr3 (24-101)||(42950064-42950141)
chr3 (24-101)||(48087596-48087673)
chr3 (24-97)||(51695650-51695723)
chr3 (21-101)||(14631543-14631623)
chr3 (25-101)||(43477155-43477231)
chr3 (26-101)||(43570008-43570083)
chr3 (24-101)||(2646920-2646997)
chr3 (44-101)||(3495093-3495150)
chr3 (24-101)||(6464389-6464466)
chr3 (24-101)||(34049825-34049902)
chr3 (24-101)||(41578004-41578081)
chr3 (24-101)||(46403101-46403178)
chr3 (24-101)||(47065785-47065862)
chr3 (24-101)||(49140098-49140175)
chr3 (24-101)||(49610587-49610664)
chr3 (24-101)||(50997486-50997563)
chr3 (24-101)||(51013322-51013399)
chr3 (24-101)||(54390540-54390617)
chr3 (24-100)||(4004131-4004207)
chr3 (21-101)||(47759932-47760012)
chr3 (26-101)||(41804000-41804075)
chr3 (24-101)||(774382-774459)
chr3 (24-101)||(6754302-6754379)
chr3 (44-101)||(7954302-7954359)
chr3 (24-101)||(25576636-25576712)
chr3 (24-101)||(42323433-42323510)
chr3 (24-101)||(49273497-49273574)
chr3 (36-101)||(50458747-50458812)
chr3 (24-101)||(10053318-10053392)
chr3 (24-95)||(52569453-52569524)
chr3 (47-101)||(33449206-33449260)
chr3 (24-101)||(2268538-2268615)
chr3 (24-101)||(7246192-7246269)
chr3 (24-101)||(30192636-30192713)
chr3 (24-101)||(36135105-36135182)
chr3 (24-101)||(36721433-36721510)
chr3 (24-101)||(53826740-53826817)
chr3 (18-101)||(44835525-44835608)
chr3 (44-101)||(8633423-8633480)
chr3 (51-97)||(14265507-14265553)
chr3 (26-86)||(20375928-20375988)
[»] chr2 (35 HSPs)
chr2 (24-101)||(27130550-27130627)
chr2 (24-101)||(35491723-35491800)
chr2 (24-101)||(37312536-37312613)
chr2 (18-101)||(29906670-29906753)
chr2 (24-101)||(6976924-6977001)
chr2 (24-101)||(34521725-34521802)
chr2 (24-101)||(39393979-39394056)
chr2 (25-101)||(29111246-29111322)
chr2 (26-101)||(10364680-10364755)
chr2 (24-101)||(2919406-2919483)
chr2 (24-101)||(3941825-3941902)
chr2 (24-101)||(5420557-5420634)
chr2 (24-101)||(10360240-10360317)
chr2 (24-101)||(33404103-33404180)
chr2 (24-101)||(41499135-41499212)
chr2 (24-101)||(42241140-42241217)
chr2 (24-101)||(3937105-3937182)
chr2 (24-101)||(12968343-12968420)
chr2 (24-101)||(17424877-17424954)
chr2 (24-101)||(19471675-19471752)
chr2 (24-101)||(40677416-40677493)
chr2 (24-101)||(43982944-43983021)
chr2 (24-101)||(6902054-6902131)
chr2 (24-101)||(29067817-29067894)
chr2 (24-101)||(42120100-42120177)
chr2 (47-101)||(18392125-18392179)
chr2 (24-101)||(22001922-22001999)
chr2 (24-101)||(32734735-32734812)
chr2 (44-101)||(39799903-39799960)
chr2 (21-101)||(22493359-22493439)
chr2 (32-101)||(20148206-20148275)
chr2 (24-101)||(16581910-16581989)
chr2 (24-101)||(17796148-17796222)
chr2 (34-86)||(17112399-17112451)
chr2 (61-101)||(34639053-34639093)
[»] chr5 (28 HSPs)
chr5 (24-100)||(4724121-4724197)
chr5 (21-99)||(35565356-35565434)
chr5 (24-101)||(33370737-33370814)
chr5 (21-101)||(27661421-27661501)
chr5 (21-101)||(35927481-35927561)
chr5 (24-101)||(541682-541759)
chr5 (24-101)||(1400349-1400426)
chr5 (24-101)||(1971448-1971525)
chr5 (24-101)||(18308343-18308420)
chr5 (24-101)||(19036721-19036798)
chr5 (24-103)||(8576188-8576267)
chr5 (24-101)||(7276-7353)
chr5 (24-101)||(8538037-8538114)
chr5 (24-101)||(19400446-19400523)
chr5 (24-101)||(28881074-28881151)
chr5 (24-101)||(3601424-3601501)
chr5 (24-101)||(11346792-11346869)
chr5 (44-101)||(30709681-30709738)
chr5 (24-101)||(40009611-40009688)
chr5 (27-101)||(3169686-3169760)
chr5 (24-101)||(1694872-1694949)
chr5 (44-101)||(11027860-11027917)
chr5 (44-101)||(38854241-38854298)
chr5 (21-101)||(17366780-17366860)
chr5 (26-101)||(6793435-6793510)
chr5 (24-69)||(7082336-7082381)
chr5 (24-75)||(36350361-36350412)
chr5 (48-87)||(2599316-2599355)
[»] chr6 (17 HSPs)
chr6 (24-101)||(801253-801330)
chr6 (24-101)||(13402621-13402698)
chr6 (21-101)||(35058776-35058856)
chr6 (24-101)||(11692539-11692616)
chr6 (24-101)||(29108228-29108305)
chr6 (24-101)||(32027672-32027749)
chr6 (24-101)||(32037731-32037808)
chr6 (24-101)||(6205572-6205649)
chr6 (24-101)||(29066641-29066718)
chr6 (24-101)||(29075654-29075731)
chr6 (24-101)||(29110626-29110703)
chr6 (26-101)||(30257625-30257700)
chr6 (32-101)||(12396864-12396933)
chr6 (24-101)||(14115125-14115202)
chr6 (44-101)||(22305884-22305941)
chr6 (24-101)||(27640268-27640345)
chr6 (24-101)||(34802940-34803017)
[»] scaffold0589 (1 HSPs)
scaffold0589 (26-101)||(2353-2428)
[»] scaffold0192 (1 HSPs)
scaffold0192 (24-101)||(17961-18038)
[»] scaffold0181 (1 HSPs)
scaffold0181 (45-101)||(24991-25047)
[»] scaffold0004 (1 HSPs)
scaffold0004 (67-101)||(64061-64095)


Alignment Details
Target: chr4 (Bit Score: 69; Significance: 4e-31; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 21 - 101
Target Start/End: Complemental strand, 21711694 - 21711614
Alignment:
Q  21 tttagttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  21711694 tttagttgatctcagcaacgtcacccgcatatcgatccactggaacatgttgtgctcccaaaacatgctcgtcacgttttc 21711614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 1042910 - 1042833
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  1042910 agttgatctcagcaacgtcacccgcatatcgatccactggaacatgctgtgctcccaaaacatgttcgtcacgttttc 1042833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 22437072 - 22436995
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  22437072 agttgatctcagcaacgtcacccgcatatcgatccactggaacatgttgtgctcccaaaacatgctcgtcacgttttc 22436995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 21 - 100
Target Start/End: Complemental strand, 17211430 - 17211351
Alignment:
Q  21 tttagttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgtttt 100  Q
    |||||||||| ||||||||||  |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  17211430 tttagttgatctcagcaacgttacccgcatatcgatccactggaacatgttgtgctcccaaaacatgctcgtcacgtttt 17211351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 43889545 - 43889622
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||| ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  43889545 agttgatctcaacaacgtcacccgcatatcgatccactggaacatgatgtgctcccaaaacatgttcgtcacgttttc 43889622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 21 - 101
Target Start/End: Original strand, 957498 - 957578
Alignment:
Q  21 tttagttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||    
T  957498 tttagttgatctcagcaacgtcacccgcatatcgatccactggaacatgctgtgctcctaaaacatgctcgtcacgttttc 957578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 24 - 100
Target Start/End: Original strand, 4785468 - 4785544
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgtttt 100  Q
    ||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  4785468 agttgatatcagcaacgttccccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcttcacgtttt 4785544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 24 - 100
Target Start/End: Original strand, 47657401 - 47657477
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgtttt 100  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  47657401 agttgatctcagcaacgtcacccgcatatcgatccactggaacatgttgtgctcccaaaatatgctcgtcacgtttt 47657477  T

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Target: chr4; HSP #9
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 242462 - 242539
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||  |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  242462 agttgatctcagcaacgttacccgcatatcgatccactggaacatgatgtgctcccaaaacatgctcgtcacgttttc 242539  T

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Target: chr4; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 2773150 - 2773093
Alignment:
Q  44 cccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2773150 cccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 2773093  T

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Target: chr4; HSP #11
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 6282369 - 6282446
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| | |||||| || |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  6282369 agttgatcttagcaacttcacccgcatatcgatccactggaacatgttgtgctcccaaaacatgctcgtcacgttttc 6282446  T

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Target: chr4; HSP #12
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 14330740 - 14330817
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||  |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  14330740 agttgatctcagcaacgttacccgcatatcgatccattggaacatgttgtgctcccaaaacatgctcgtcacgttttc 14330817  T

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Target: chr4; HSP #13
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 25762759 - 25762682
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||  |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  25762759 agttgatctcagcaacgttacccgcatatcgatccaccagaacatgttgtgctcccaaaacatgttcgtcacgttttc 25762682  T

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Target: chr4; HSP #14
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 40353819 - 40353896
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| | |||||| || |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  40353819 agttgatctaagcaacttcacccgcatatcgatccactggaacatgttgtgctcccaaaacatggtcgtcacgttttc 40353896  T

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Target: chr4; HSP #15
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 41794608 - 41794685
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| | |||||| || |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  41794608 agttgatctaagcaacttcacccgcatatcgatccactggaacatgttgtgctcccaaaacatggtcgtcacgttttc 41794685  T

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Target: chr4; HSP #16
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 49791982 - 49792059
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||  || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  49791982 agttgatctcagcaacgttacctgcatatcgatccactggaacatgttgtgctcccaaaacatgctcgtcacgttttc 49792059  T

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Target: chr4; HSP #17
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 51027813 - 51027890
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||| ||||||  |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  51027813 agttgatctcaacaacgttacccgcatatcgatccactggaacatgttgtgctcccaaaacatgctcgtcacgttttc 51027890  T

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Target: chr4; HSP #18
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 51428238 - 51428315
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||| ||||||  |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  51428238 agttgatctcaacaacgttacccgcatatcgatccactggaacatgttgtgctcccaaaacatgctcgtcacgttttc 51428315  T

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Target: chr4; HSP #19
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 24 - 100
Target Start/End: Original strand, 26591731 - 26591807
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgtttt 100  Q
    ||||||| | ||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  26591731 agttgatcttagcaacgttacccgcatatcgatccactggaacatgttgtgctcccaaaatatgttcgtcacgtttt 26591807  T

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Target: chr4; HSP #20
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 24 - 100
Target Start/End: Complemental strand, 49094906 - 49094830
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgtttt 100  Q
    ||||||| | |||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  49094906 agttgatctaagcaacttcacccgcatatcgatccactggaacatgttgtgctcccaaaacatggtcgtcacgtttt 49094830  T

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Target: chr4; HSP #21
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 37866568 - 37866490
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctccc-aaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| || ||||||||||    
T  37866568 agttgatctcagcaacgtcacccgcatatcgatccactggaacatgttgtgctcccgaaaacatgctcatcacgttttc 37866490  T

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Target: chr4; HSP #22
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 1226320 - 1226243
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||  |||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||||    
T  1226320 agttgatctcagcaacgttacccgcatatcgatccactagaacatgttgtgctcccaaaacatgctcgtcacattttc 1226243  T

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Target: chr4; HSP #23
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 6177361 - 6177438
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| | |||||| || |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  6177361 agttgatctaagcaacttcacccgcatatcgatccactggaacatgctgtgctcccaaaacatggtcgtcacgttttc 6177438  T

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Target: chr4; HSP #24
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 10312413 - 10312356
Alignment:
Q  44 cccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  10312413 cccgcatatcgatccactggaacatgttgtgctcccaaaacatgctcgtcacgttttc 10312356  T

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Target: chr4; HSP #25
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 11288456 - 11288379
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||  | |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  11288456 agttgatctcagcaacgttactcgcatatcgatccactggaacatgatgtgctcccaaaacatgctcgtcacgttttc 11288379  T

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Target: chr4; HSP #26
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 20778915 - 20778992
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| |||||||||   |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  20778915 agttgatctcagcaacgaaacccgcatatcgatccattggaacatgttgtgctcccaaaacatgctcgtcacgttttc 20778992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 21017223 - 21017300
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| | |||||| || |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  21017223 agttgatctaagcaacttcacccgcatatcgatccactggaacatgctgtgctcccaaaacatggtcgtcacgttttc 21017300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 27759488 - 27759411
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||  | |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  27759488 agttgatctcagcaacgttactcgcatatcgatccactggaacatgctgtgctcccaaaacatgctcgtcacgttttc 27759411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 34153332 - 34153409
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||| |||||||  |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  34153332 agttgatctcaccaacgtcatccgcatattgatccactggaacatgttgtgctcccaaaacatgatcgtcacgttttc 34153409  T

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Target: chr4; HSP #30
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 34529842 - 34529919
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||| ||| ||||||| |||||    
T  34529842 agttgatctcagcaacgtcacctgcatatcgatccactggaacatgttgtgctcccaaaaaatgctcgtcacattttc 34529919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 39589090 - 39589013
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| |||||||||||  ||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||    
T  39589090 agttgatctcagcaacgtcatccgcatatcgatccactggaacatgctgtgctcccaaaacatgctcgtcacattttc 39589013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 55796904 - 55796827
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| | |||||| || |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  55796904 agttgatctaagcaacttcacccgcatatcgatccactggaacatgctgtgctcccaaaacatggtcgtcacgttttc 55796827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 56139071 - 56138994
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| | |||||| || |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  56139071 agttgatctaagcaacttcacccgcatatcgatccactggaacatgctgtgctcccaaaacatggtcgtcacgttttc 56138994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 24 - 95
Target Start/End: Complemental strand, 45939686 - 45939615
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcac 95  Q
    ||||||| ||||||||||  | |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  45939686 agttgatctcagcaacgttactcgcatatcgatccactggaacatgttgtgctcccaaaacatgctcgtcac 45939615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 31824675 - 31824752
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| | ||||||||  ||||||||| |||||||| ||||||||||||||||||||||||| |||||||||||||    
T  31824675 agttgatctaagcaacgttacccgcatattgatccactagaacatgttgtgctcccaaaacatgctcgtcacgttttc 31824752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 32937948 - 32938025
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||| ||||||  |||||||||||||||||||||||||| ||||||||| ||||||| |||||||||||||    
T  32937948 agttgatctcaacaacgttacccgcatatcgatccactggaacatgctgtgctcccgaaacatgctcgtcacgttttc 32938025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 33163590 - 33163667
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||| ||||||  ||| |||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  33163590 agttgatctcaacaacgttacccacatatcgatccactggaacatgttgtgctcccaaaacatgctcgtcacattttc 33163667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 36776565 - 36776642
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||| ||||||| ||||||||||||||||||||||||||  ||||||||||| |||| |||||||||||||    
T  36776565 agttgatctcaacaacgtcacccgcatatcgatccactggaacatgccgtgctcccaaaccatgctcgtcacgttttc 36776642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 47 - 100
Target Start/End: Original strand, 46816592 - 46816645
Alignment:
Q  47 gcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgtttt 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  46816592 gcatatcgatccactggaacatgttgtgctcccaaaacatgctcgtcacgtttt 46816645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 49064140 - 49064063
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| | ||||||||| ||||||||||||||||| | ||||||||||||||| |||||||| |||||||||||||    
T  49064140 agttgatctaagcaacgtcacccgcatatcgatccacggaaacatgttgtgctccaaaaacatgctcgtcacgttttc 49064063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 49423804 - 49423881
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||| |||||||||||||||||| |||||||  ||||||||| |||||| |||||||||||||    
T  49423804 agttgatctcagcaacgtcacccgcatatcgatccacttgaacatgccgtgctcccagaacatgctcgtcacgttttc 49423881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 49817690 - 49817767
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||  |||||||||||||||||| ||||||| ||||||||||||||||| |||| ||||||||    
T  49817690 agttgatctcagcaacgttacccgcatatcgatccactagaacatgatgtgctcccaaaacatgctcgtaacgttttc 49817767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 3393465 - 3393388
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||  |  ||||||||||||||| ||||||||||||||||||||||||| || ||||||||||    
T  3393465 agttgatctcagcaacgttacatgcatatcgatccactagaacatgttgtgctcccaaaacatgctcctcacgttttc 3393388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 20901734 - 20901791
Alignment:
Q  44 cccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    |||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||    
T  20901734 cccgcatatcgatccactagaacatgctgtgctcccaaaacatgctcgtcacgttttc 20901791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 93
Target Start/End: Complemental strand, 21169612 - 21169543
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtc 93  Q
    ||||||| ||||||||||| || ||||||||||||||||| ||||| ||||||||||||||||| |||||    
T  21169612 agttgatctcagcaacgtcacctgcatatcgatccactggtacatgctgtgctcccaaaacatgctcgtc 21169543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 44560226 - 44560303
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||| |||||||||| || |||||||||||| | ||||||||||||||| | |||||||||||    
T  44560226 agttgatctcagcaacgtcacccgcatatcaatacactggaacatgctttgctcccaaaacatgcttgtcacgttttc 44560303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 98
Target Start/End: Complemental strand, 18412756 - 18412682
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgtt 98  Q
    ||||||| ||||||||||  | ||||||||||||||||| |||||| ||||||||||||||||| || |||||||    
T  18412756 agttgatctcagcaacgttacacgcatatcgatccactgaaacatggtgtgctcccaaaacatgctcctcacgtt 18412682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 48 - 97
Target Start/End: Complemental strand, 13850886 - 13850837
Alignment:
Q  48 catatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgt 97  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  13850886 catatcgatccacggtaacatgttgtgctcccaaaacatgttcgtcacgt 13850837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 24606913 - 24606836
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||  ||| |||||| |||||| |||||||| ||||||||||| ||||| |||||||||||||    
T  24606913 agttgatctcagcaacgttacccacatatcaatccacgggaacatgatgtgctcccaatacatgctcgtcacgttttc 24606836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 9489839 - 9489763
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| |||  |||||| |||||||||| ||||||||||||||| |||||| |||||||||| ||||||| |||||    
T  9489839 agttgatctcaataacgtcacccgcatatcaatccactggaacatgctgtgct-ccaaaacatgctcgtcacattttc 9489763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 97
Target Start/End: Complemental strand, 13866400 - 13866351
Alignment:
Q  48 catatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgt 97  Q
    |||||| |||||| | ||||||||||||||||||||||||||||||||||    
T  13866400 catatcaatccacggtaacatgttgtgctcccaaaacatgttcgtcacgt 13866351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 42886427 - 42886350
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||  ||||| |||||||||||| ||| ||||||||||| |||| |||| |||||| ||||||    
T  42886427 agttgatctcagcaacgttacccgcgtatcgatccactagaaaatgttgtgctctcaaagcatgctcgtcatgttttc 42886350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 47 - 101
Target Start/End: Complemental strand, 28082376 - 28082322
Alignment:
Q  47 gcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    |||||| ||||||||| |||||| ||||||||||||||||| |||||| ||||||    
T  28082376 gcatattgatccactgaaacatgatgtgctcccaaaacatgctcgtcatgttttc 28082322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 97
Target Start/End: Complemental strand, 31324311 - 31324262
Alignment:
Q  48 catatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgt 97  Q
    ||||||||||||| | ||||||||||||||| |||||||| |||||||||    
T  31324311 catatcgatccacggtaacatgttgtgctccaaaaacatgctcgtcacgt 31324262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 69; Significance: 4e-31; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 21 - 101
Target Start/End: Original strand, 39224239 - 39224319
Alignment:
Q  21 tttagttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  39224239 tttagttgatctcagcaacgtcacccgcatatcgatccactggaacatgttgtgctcccaaaacatgctcgtcacgttttc 39224319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 17697207 - 17697130
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  17697207 agttgatctcagcaacgtcacccgcatatcgatccactggaacatgttgtgctcccaaaacatgctcgtcacgttttc 17697130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 36909722 - 36909645
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  36909722 agttgatctcagcaacgtcacccgcatatcgatccactggaacatgttgtgctcccaaaacatgctcgtcacgttttc 36909645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 26 - 101
Target Start/End: Original strand, 35586976 - 35587051
Alignment:
Q  26 ttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35586976 ttgatctcagcaaggtcacccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 35587051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 14173803 - 14173880
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  14173803 agttgatctcagcaacgtcacccgcatatcgatccactggaacatgttgtcctcccaaaacatgctcgtcacgttttc 14173880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 24270408 - 24270485
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  24270408 agttgatctcagcaacgtcacccgcatatcgatccactggaacatgttgtgctcctaaaacatgctcgtcacgttttc 24270485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 27486735 - 27486812
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  27486735 agttgatctcagcaacgtcacccgcatatcgatccaatggaacatgttgtgctcccaaaacatgctcgtcacgttttc 27486812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 39856951 - 39857028
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||    
T  39856951 agttgatctcagcaacgtcacccgcatatcgatccactggaacatgtcgtgctcccaaaacatgatcgtcacgttttc 39857028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 45689280 - 45689203
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  45689280 agttgatctcagcaacgtcacccgcatatccatccactggaacatgttgtgctcccaaaacatgctcgtcacgttttc 45689203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 48568449 - 48568526
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||  |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  48568449 agttgatctcagcaacgttacccgcatatcgatccactggaacatgttgtgctcccaaaacatgctcgtcacgttttc 48568526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 49396865 - 49396788
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  49396865 agttgatctcagcaacgtcacccgcatatcaatccactggaacatgttgtgctcccaaaacatgctcgtcacgttttc 49396788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 29762260 - 29762343
Alignment:
Q  18 atttttagttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||| ||||||| ||| ||||||| |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  29762260 attttcagttgatctcatcaacgtcacccgtatatcgatccactggaacatgttgtgctcccaaaacatgctcgtcacgttttc 29762343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 35576500 - 35576423
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||    
T  35576500 agttgatctcagcaacgtcacccgcatatcgatccaccggaacatgctgtgctcccaaaacatgctcgtcacgttttc 35576423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 37778240 - 37778163
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||    
T  37778240 agttgatctcagcaacgtcacccgcatatcgatcaactggaacatgttgttctcccaaaacatgctcgtcacgttttc 37778163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 42571821 - 42571898
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||  |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  42571821 agttgatctcagcaacgttacccgcatatcgatccactggaacatgttgtgctcccaaaacatgctcttcacgttttc 42571898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 44337364 - 44337441
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||| |||||||||||||    
T  44337364 agttgatctcagcaacgtcacccgcatatcgatccactgaaacatgttgtgcacccaaaacatgctcgtcacgttttc 44337441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 49427548 - 49427471
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| | |||||| || |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  49427548 agttgatctaagcaacttcacccgcatatcgatccactggaacatgttgtgctcccaaaacatgctcgtcacgttttc 49427471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 49926425 - 49926502
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  49926425 agttgatctcagcaacgtcacctgcatatcgatccactggaacatgttgtgctcccaaaacatgctcctcacgttttc 49926502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 51269963 - 51269886
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    |||||||  |||||||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  51269963 agttgatcccagcaacgtcacccgcatatcgatccactggaacatgctgtgctcccaaaacatgctcgtcacgttttc 51269886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 24 - 100
Target Start/End: Original strand, 50068304 - 50068380
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgtttt 100  Q
    ||||||| ||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  50068304 agttgatctcagcaacgttacccgcatatcgatccactggaacatgatgtgctcccaaaacatgttcgtcacatttt 50068380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 26 - 101
Target Start/End: Complemental strand, 13973083 - 13973008
Alignment:
Q  26 ttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||| ||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  13973083 ttgatctcagcaatgtcacccgcatattgatccactggaacatgttgtgctcccaaaacatgctcgtcacgttttc 13973008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 49598921 - 49598995
Alignment:
Q  25 gttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttt 99  Q
    |||||| ||||||||||  |||||||||||||||||||||||||||||||||||||||||||| | |||||||||    
T  49598921 gttgatctcagcaacgttacccgcatatcgatccactggaacatgttgtgctcccaaaacatgcttgtcacgttt 49598995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 17686406 - 17686483
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||    
T  17686406 agttgatctcagctacgtcacccgcatatcgatccactggaagatgttgtgctcccaaaacatgctcttcacgttttc 17686483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 18842600 - 18842523
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||  ||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||    
T  18842600 agttgatctcagcaacgttacccgcatatcgatccactggaacatgccgtgctcccaaaacatgctcgtcacgttttc 18842523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 21484688 - 21484765
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||| | ||||||||||||||||||||||||||||||||| |||||||| ||||||| |||||    
T  21484688 agttgatctcagcaacgtcactcgcatatcgatccactggaacatgttgtgctccaaaaacatgctcgtcacattttc 21484765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 29436134 - 29436057
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||| ||||| |||||||||||||||||||| ||| ||||||||||||| |||||||||||||    
T  29436134 agttgatctcagcaacgtcacccgcgtatcgatccactggaacatgctgtactcccaaaacatgctcgtcacgttttc 29436057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 21 - 101
Target Start/End: Original strand, 41874926 - 41875006
Alignment:
Q  21 tttagttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    |||||||||| |||||||| |  |||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||||    
T  41874926 tttagttgatctcagcaacattacccgcatatcgatccactagaacatgttgtgctcccaaaacatgctcgtcacattttc 41875006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 12791318 - 12791395
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| |||  |||||| ||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||    
T  12791318 agttgatctcaaaaacgtcacccgcatatcgatccactggaacatgttgtgctccaaaaaaatgctcgtcacgttttc 12791395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 13635362 - 13635419
Alignment:
Q  44 cccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  13635362 cccgcatatcgatccactggaacatgttgtgctcccaaaacatggtcgtgacgttttc 13635419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 18170178 - 18170109
Alignment:
Q  32 tcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||| |||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||    
T  18170178 tcagcaatgtcacccgcatatcgatctactggaacatgatgtgctcccaaaacatgctcgtcacgttttc 18170109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 35526222 - 35526299
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||| ||||||||||||||||||| |||||  ||||||||||||||||| ||||| |||||||    
T  35526222 agttgatctcagcaacgtcacccgcatatcgatccactgcaacattctgtgctcccaaaacatggtcgtctcgttttc 35526299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 38046479 - 38046556
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||| || |||||| |||| ||||||||||||||||||||||||||||| | |||||||||||    
T  38046479 agttgatctcagcaacgtcaccggcatattgatcgactggaacatgttgtgctcccaaaacatgcttgtcacgttttc 38046556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 49263033 - 49263110
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||| ||||||  || |||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  49263033 agttgatctcaacaacgttaccagcatatagatccactggaacatgttgtgctcccaaaacatgctcgtcacgttttc 49263110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 24 - 100
Target Start/End: Complemental strand, 3658634 - 3658558
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgtttt 100  Q
    ||||||| ||||||||||  |  ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  3658634 agttgatctcagcaacgttacttgcatatcgatccactagaacatgttgtgctcccaaaacacgttcgtcacgtttt 3658558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 26 - 101
Target Start/End: Complemental strand, 35185130 - 35185054
Alignment:
Q  26 ttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgct-cccaaaacatgttcgtcacgttttc 101  Q
    ||||| ||||||||||| || |||||||||||||||||||||||  ||||| |||||||||||||||||||||||||    
T  35185130 ttgatttcagcaacgtcacctgcatatcgatccactggaacatgccgtgctccccaaaacatgttcgtcacgttttc 35185054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 26 - 101
Target Start/End: Complemental strand, 6435931 - 6435856
Alignment:
Q  26 ttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||| ||| ||||||| | | ||||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  6435931 ttgatctcaacaacgtcactcacatatcgatccactggaacatgttgtgctcccaaaacttgctcgtcacgttttc 6435856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 26 - 101
Target Start/End: Original strand, 46180327 - 46180402
Alignment:
Q  26 ttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||| ||| ||||||  ||| |||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  46180327 ttgatctcaacaacgttacccacatatcgatccactggaacatgctgtgctcccaaaacatgctcgtcacgttttc 46180402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 27035363 - 27035440
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||  |||||||||||||||||||||| ||| ||| ||||||||||||  |||||||||||||    
T  27035363 agttgatctcagcaacgttacccgcatatcgatccactggaatatggtgttctcccaaaacatactcgtcacgttttc 27035440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 44597862 - 44597785
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||| ||||||| ||| |||||||||||||||||||||| ||||||||||||||||  || ||||||||||    
T  44597862 agttgatctcatcaacgtcacccacatatcgatccactggaacatgctgtgctcccaaaacatactcatcacgttttc 44597785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 47488082 - 47488159
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||  |||||||||||||| ||| ||| || |||||||||||||||||| |||||||||||||    
T  47488082 agttgatctcagcaacgttacccgcatatcgatcaactagaaaatattgtgctcccaaaacatgctcgtcacgttttc 47488159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 34 - 101
Target Start/End: Complemental strand, 19160468 - 19160401
Alignment:
Q  34 agcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    |||||| || |||||||||||||||||||||||||| |||| |||||||||||  |||||||||||||    
T  19160468 agcaacttcacccgcatatcgatccactggaacatgctgtgttcccaaaacatagtcgtcacgttttc 19160401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 26 - 100
Target Start/End: Complemental strand, 5765365 - 5765291
Alignment:
Q  26 ttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgtttt 100  Q
    ||||| ||||||||||  |||||||||||||||||| ||||||||| ||||||||||||||| || ||| |||||    
T  5765365 ttgatctcagcaacgttacccgcatatcgatccactagaacatgttctgctcccaaaacatgctcatcaagtttt 5765291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 13283866 - 13283789
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||  || ||||||||||||||| ||||||| || |||||||||||||| |||||| ||||||    
T  13283866 agttgatctcagcaacgttacctgcatatcgatccactagaacatgctgcgctcccaaaacatgctcgtcatgttttc 13283789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 23342794 - 23342725
Alignment:
Q  32 tcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||||||  |||||||||||||||||| ||||||  |||||||| |||||||| |||||||||||||    
T  23342794 tcagcaacgttacccgcatatcgatccactcgaacataatgtgctccaaaaacatgctcgtcacgttttc 23342725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 41780854 - 41780777
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| | ||||||||| || ||||||| ||| ||||||||||| ||||||||||||| || ||||||||||||||    
T  41780854 agttgatcttagcaacgtcacctgcatatctatctactggaacatgctgtgctcccaaaatatattcgtcacgttttc 41780777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 48215359 - 48215282
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| | |||||| || |||||||||||||||||||||||||| |||||||| |||| ||| |||||| ||||||    
T  48215359 agttgatctaagcaacttcacccgcatatcgatccactggaacatgctgtgctccaaaaatatgctcgtcatgttttc 48215282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 54 - 101
Target Start/End: Complemental strand, 13148450 - 13148403
Alignment:
Q  54 gatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||    
T  13148450 gatccactggaacatgttgtgctctcaaaacatgttcttcacgttttc 13148403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 101
Target Start/End: Original strand, 30309886 - 30309948
Alignment:
Q  39 cgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    |||| ||||||||||||||||||| ||| |  ||||||||||||||||| |||||||||||||    
T  30309886 cgtcacccgcatatcgatccactgaaacgtcctgtgctcccaaaacatgctcgtcacgttttc 30309948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 17372888 - 17372811
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||| ||||||  | || ||||||||||||||||| ||| |||||||||||||||||||| |||| |||||    
T  17372888 agttgatctcatcaacgttacacgtatatcgatccactggaatatggtgtgctcccaaaacatgttcttcacattttc 17372811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 45 - 101
Target Start/End: Original strand, 24363866 - 24363922
Alignment:
Q  45 ccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||||||||||||| ||||||  ||||| |||||||||||||| ||||||||||    
T  24363866 ccgcatatcgatccactagaacatactgtgcccccaaaacatgttcttcacgttttc 24363922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 24 - 87
Target Start/End: Complemental strand, 16081446 - 16081383
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatg 87  Q
    |||||||  |||||||||  | |||||||||||| ||| |||||||||||||||| ||||||||    
T  16081446 agttgattgcagcaacgttacacgcatatcgatcaactagaacatgttgtgctccaaaaacatg 16081383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 29707583 - 29707621
Alignment:
Q  21 tttagttgatgtcagcaacgtcgcccgcatatcgatcca 59  Q
    |||||||||| ||||||||||| ||||||||||||||||    
T  29707583 tttagttgatctcagcaacgtcacccgcatatcgatcca 29707621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 69
Target Start/End: Original strand, 40533331 - 40533376
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatg 69  Q
    ||||||| || |||||||  ||||||||||||||||||||||||||    
T  40533331 agttgatctcggcaacgttacccgcatatcgatccactggaacatg 40533376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 66; Significance: 2e-29; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 1953 - 1876
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  1953 agttgatctcagcaacgtcacccgcatatcgatccactggaacatgttgtgctcccaaaacatgtccgtcacgttttc 1876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 2e-29; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 26452496 - 26452419
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  26452496 agttgatctcagcaacgtcacccgcatatcgatccactggaacatgttgtgctcccaaaacatgctcgtcacgttttc 26452419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 43693308 - 43693231
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  43693308 agttgatctcagcaacgtcacccgcatatcgatccactggaacatgttgtgctcccaaaacatgctcgtcacgttttc 43693231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 44943124 - 44943201
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  44943124 agttgatctcagcaacgtcacccgcatatcgatccactggaacatgttgtgctcccaaaacatgctcgtcacgttttc 44943201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 42603624 - 42603548
Alignment:
Q  25 gttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    |||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  42603624 gttgatttcagcaacgtcacccgcatatcgatccactggaacatgatgtgctcccaaaacatgctcgtcacgttttc 42603548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 15032367 - 15032444
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| | |||||| || |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  15032367 agttgatctaagcaacttcacccgcatatcgatccactggaacatgttgtgctcccaaaacatgctcgtcacgttttc 15032444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 33799594 - 33799671
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||   ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  33799594 agttgatctcagcaacgttatccgcatatcgatccactggaacatgttgtgctcccaaaacatgctcgtcacgttttc 33799671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 34615124 - 34615047
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||  |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  34615124 agttgatctcagcaacgttacccgcatatcaatccactggatcatgttgtgctcccaaaacatgttcgtcacgttttc 34615047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 38033968 - 38034045
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||  |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  38033968 agttgatctcagcaacgttacccgcatatcgatccactagaacatgttgtgctcccaaaacatgctcgtcacgttttc 38034045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 41275565 - 41275488
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||| |||||||||||||    
T  41275565 agttgatctcagcaacgtcacccgcatatcgatccattggaacatgttgtgctctcaaaacatgctcgtcacgttttc 41275488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 41363827 - 41363750
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||  |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  41363827 agttgatctcagcaacgtaacccgcatatcgatccactggaacatgttgtgctcccaaaacatgctcgtcacattttc 41363750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 41857017 - 41857094
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| ||||||| |||||    
T  41857017 agttgatctcagcaacgtcacccgcatatcgatccactggaacatgttgtgctcccaaaatatgctcgtcacattttc 41857094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 42169003 - 42169080
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| || |||||||  |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  42169003 agttgatctctgcaacgttacccgcatatcgatccactggaacatgttgtgctcccaaaacatgctcgtcacgttttc 42169080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 32 - 101
Target Start/End: Original strand, 18440346 - 18440415
Alignment:
Q  32 tcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  18440346 tcagcaacgtcaccctcatatcgatccactggaacatgttgtgctcctaaaacatgctcgtcacgttttc 18440415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 40414781 - 40414704
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||| |||||||||| ||| |||| |||||||||||||||||||||||| |||||||||||||    
T  40414781 agttgatctcagcaacgtcacccgcatatcaatcaactgaaacatgttgtgctcccaaaacatgctcgtcacgttttc 40414704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 40415428 - 40415351
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||| ||||||| || |||||||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  40415428 agttgatctcaacaacgtcacctgcatatcgatccacgggaacatgttgtgctcccaaaacatgctcgtcacgttttc 40415351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 40702531 - 40702454
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| |||||||||||  ||||||||||||||||||||||||||| || |||||||||||| |||||||||||||    
T  40702531 agttgatctcagcaacgtcatccgcatatcgatccactggaacatgttttgttcccaaaacatgctcgtcacgttttc 40702454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 2417085 - 2417009
Alignment:
Q  25 gttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    |||||| ||| ||||||| || ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  2417085 gttgatctcatcaacgtcacctgcatatcgatcaactggaacatgttgtgctcccaaaacatgctcgtcacgttttc 2417009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 24 - 100
Target Start/End: Original strand, 19242205 - 19242281
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgtttt 100  Q
    ||||||| | ||||||||| ||||||||||||||||||||||||||||||  |||||||||||| ||||||||||||    
T  19242205 agttgatcttagcaacgtcacccgcatatcgatccactggaacatgttgtattcccaaaacatgctcgtcacgtttt 19242281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 24 - 100
Target Start/End: Original strand, 19315389 - 19315465
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgtttt 100  Q
    ||||||| | ||||||||| ||||||||||||||||||||||||||||||  |||||||||||| ||||||||||||    
T  19315389 agttgatcttagcaacgtcacccgcatatcgatccactggaacatgttgtattcccaaaacatgctcgtcacgtttt 19315465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 43638720 - 43638797
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||  | ||||||||||| |||||||||||||||||||||||||||||| ||||||| |||||    
T  43638720 agttgatctcagcaacgttacgcgcatatcgatgcactggaacatgttgtgctcccaaaacatgctcgtcacattttc 43638797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 26484726 - 26484671
Alignment:
Q  46 cgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  26484726 cgcatatcgatccactggaacatgctgtgctcccaaaacatgctcgtcacgttttc 26484671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 485301 - 485378
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| | |||||| ||  ||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||    
T  485301 agttgatctaagcaacttcatccgcatatcgatccactagaacatgctgtgctcccaaaacatggtcgtcacgttttc 485378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 24861514 - 24861437
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| |||||||| || |||||||||| ||||| | ||||||||||||||||||||||||| ||||||| |||||    
T  24861514 agttgatctcagcaacatcacccgcatatcaatccaattgaacatgttgtgctcccaaaacatgctcgtcacattttc 24861437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 28706185 - 28706262
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||| ||||||  | ||||||||||||||||  |||||||||||||||||||||||| |||||||||||||    
T  28706185 agttgatctcaacaacgttacacgcatatcgatccactaaaacatgttgtgctcccaaaacatgctcgtcacgttttc 28706262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 87
Target Start/End: Original strand, 3589331 - 3589372
Alignment:
Q  46 cgcatatcgatccactggaacatgttgtgctcccaaaacatg 87  Q
    |||||||||||||||||||||||  |||||||||||||||||    
T  3589331 cgcatatcgatccactggaacatcctgtgctcccaaaacatg 3589372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 50 - 101
Target Start/End: Complemental strand, 16575837 - 16575786
Alignment:
Q  50 tatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||||||||| |||||||||||| || || |||||||    
T  16575837 tatcgatgcactggaacatgttgtggtcccaaaacatgctcatcccgttttc 16575786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 31171853 - 31171911
Alignment:
Q  18 atttttagttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgct 76  Q
    ||||| ||||||| ||||||||||| ||| ||||||||||||| | |||||| ||||||    
T  31171853 attttcagttgatctcagcaacgtcacccacatatcgatccacggtaacatgctgtgct 31171911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 66; Significance: 2e-29; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 34141028 - 34140951
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  34141028 agttgatctcagcaacgtcacccgcatatcgatccactggaacatgttgtgctcccaaaacatgtccgtcacgttttc 34140951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 48270811 - 48270734
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  48270811 agttgatctcagcaacgtcacccgcatatcgatccactggaacatgttgtgctcccaaaacatgctcgtcacgttttc 48270734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 21 - 101
Target Start/End: Original strand, 39477281 - 39477361
Alignment:
Q  21 tttagttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  39477281 tttagttgatctcagcaacgtcacccgcatatcgatccactggaacatgttgtgctcccaaaacatgctcgtcatgttttc 39477361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 47269067 - 47268984
Alignment:
Q  18 atttttagttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    |||||||||| || ||||||||||  |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  47269067 atttttagttaatctcagcaacgttacccgcatatcgatccactggaacatgttgtgctcccaaaacatgctcgtcacgttttc 47268984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 17183375 - 17183298
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| |||||||| || ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  17183375 agttgatctcagcaacatcacccgcatatcgatccactggaacatgttgtgcttccaaaacatgttcgtcacgttttc 17183298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 21187343 - 21187420
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  21187343 agttgatctcagcaacgtcacccgcatatcgatccactagaacatgttgtgctcccaaaacatgctcgtcacgttttc 21187420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 36393868 - 36393945
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  36393868 agttgatctcagcaacgtcacccgcatatcgatccactggaacatattgtgctcccaaaacatgctcgtcacgttttc 36393945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 41048946 - 41048869
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  41048946 agttgatctcagcaacgtcacccgcatatcgatccactggaacatgttgtgctcccaaaacatgctcgtcgcgttttc 41048869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 48315224 - 48315301
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  48315224 agttgatctcagcaacgtcacccgcatatcgatctactggaacatgttgtgctcccaaaacatgctcgtcacgttttc 48315301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 24 - 100
Target Start/End: Original strand, 28979066 - 28979142
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgtttt 100  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  28979066 agttgatctcagcaacgtcacccgcatatcgatccactggaacatgctgtgctcccaaaacatgctcgtcacgtttt 28979142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 20378747 - 20378824
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| |||||||| || ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  20378747 agttgatctcagcaacatcacccgcatatctgtccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 20378824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 41217777 - 41217700
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  41217777 agttgatctcagcaacgttacccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcttcactttttc 41217700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 27 - 101
Target Start/End: Original strand, 30354862 - 30354936
Alignment:
Q  27 tgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    |||| |||||||||||  || |||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  30354862 tgatctcagcaacgtcatccacatatcgatccactggaacatgttgtgctcccaaaacatgctcgtcacgttttc 30354936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 9367164 - 9367241
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| | |||||| || |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  9367164 agttgatctaagcaacttcacccgcatatcgatccactggaacatgctgtgctcccaaaacatggtcgtcacgttttc 9367241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 15337949 - 15338026
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||  ||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||    
T  15337949 agttgatctcagcaacgttacccgcatatcgatccactgaaacatgttgtgctcccaaaacatgctcatcacgttttc 15338026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 20564922 - 20564845
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| | |||||| || |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  20564922 agttgatctaagcaacttcacccgcatatcgatccactggaacatgctgtgctcccaaaacatggtcgtcacgttttc 20564845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 42735425 - 42735348
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||| ||||||||||||| |||| ||| ||||||||||||||||||||| |||||||||||||    
T  42735425 agttgatctcagcaacgtcacccgcatatcgattcactagaatatgttgtgctcccaaaacatgctcgtcacgttttc 42735348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 43351144 - 43351220
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  43351144 agttgatctcagcaacgtcaccc-catatcgatccactggaacatgttgtgctcccaaaacatgctcgtcatgttttc 43351220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 24 - 95
Target Start/End: Original strand, 2206081 - 2206152
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcac 95  Q
    ||||||| ||||||||||  ||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  2206081 agttgatctcagcaacgttacccgcatatcgatccactggaacatattgtgctcccaaaacatgctcgtcac 2206152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 34 - 101
Target Start/End: Complemental strand, 17839476 - 17839409
Alignment:
Q  34 agcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    |||||| || |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  17839476 agcaacttcacccgcatatcgatccactggaacatgctgtgctcccaaaacatgctcgtcacgttttc 17839409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 21614804 - 21614881
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||  |||||||||||||||||| ||||||| ||||||||||||||||| ||||| |||||||    
T  21614804 agttgatctcagcaacgttacccgcatatcgatccactagaacatgatgtgctcccaaaacatgctcgtcgcgttttc 21614881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 48 - 101
Target Start/End: Original strand, 26603273 - 26603326
Alignment:
Q  48 catatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  26603273 catatcgatccactggaacatgttgtgctcccaaaacatgctcgtcacgttttc 26603326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 40588712 - 40588635
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||| ||||||  |||||||||||||||||||||||||||||||||||||||||||| || ||| ||||||    
T  40588712 agttgatctcaacaacgttacccgcatatcgatccactggaacatgttgtgctcccaaaacatgctcatcatgttttc 40588635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 32 - 101
Target Start/End: Original strand, 46862246 - 46862315
Alignment:
Q  32 tcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||||||| | |||||||||||||||||||||||| ||||||||||||||| | |||||||||||||    
T  46862246 tcagcaacgtcactcgcatatcgatccactggaacatgctgtgctcccaaaacaagctcgtcacgttttc 46862315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 1642631 - 1642708
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||| ||||||  | |||||||||||||||| ||||||||||||||||||||||||| || ||||||||||    
T  1642631 agttgatctcaacaacgttacacgcatatcgatccacttgaacatgttgtgctcccaaaacatgctcctcacgttttc 1642708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 18237727 - 18237650
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||  |||||||| ||||||||||||||||| ||||||||||||| ||| |||||| ||||||    
T  18237727 agttgatctcagcaacgttacccgcataccgatccactggaacatgatgtgctcccaaaatatgctcgtcatgttttc 18237650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 21650687 - 21650610
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||  ||| ||||||||||||||||||||||||||| ||||| |||||| ||||||| |||||    
T  21650687 agttgatctcagcaacgttacccacatatcgatccactggaacatgttgtgatcccataacatgctcgtcacattttc 21650610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 28114437 - 28114514
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||| ||| ||| |||||||| |||||||||||||||||| |||||||| |||||| ||||||    
T  28114437 agttgatctcagcaacgtcacccacatttcgatccattggaacatgttgtgctcctaaaacatgctcgtcatgttttc 28114514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 30360679 - 30360603
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||| | |||||||||| ||||||| ||||||||||||||||||||||||| |||| ||||||||    
T  30360679 agttgatctcagcaacg-cacccgcatatcaatccactagaacatgttgtgctcccaaaacatgctcgttacgttttc 30360603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 50 - 101
Target Start/End: Original strand, 45363313 - 45363364
Alignment:
Q  50 tatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  45363313 tatcgatccactggaacatgatgtgctcccaaaacatgctcgtcacgttttc 45363364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 48220788 - 48220863
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| |||||| |||| || |||||| |||||||||||||||| |||||||||  |||||| |||||||||||||    
T  48220788 agttgatctcagcaccgtcacctgcatattgatccactggaacatgctgtgctccc--aacatgctcgtcacgttttc 48220863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 100
Target Start/End: Complemental strand, 2356452 - 2356376
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgtttt 100  Q
    ||||||| ||| ||||||  | |||||||||||||| ||||||||| ||| ||||||||||||| ||||||| ||||    
T  2356452 agttgatctcaacaacgttactcgcatatcgatccattggaacatgctgttctcccaaaacatgctcgtcacatttt 2356376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 10523212 - 10523154
Alignment:
Q  44 cccgcatatcgatccactggaa-catgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    |||||||||||||||||  ||| ||||| |||||||||||||||| |||||||||||||    
T  10523212 cccgcatatcgatccacaagaaacatgtggtgctcccaaaacatgctcgtcacgttttc 10523154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 2e-29; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 34472120 - 34472197
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  34472120 agttgatctcagcaacgtcacccgcatatcgatccactggaacatgttgtgctcccaaaacatgctcgtcacgttttc 34472197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 34693334 - 34693411
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  34693334 agttgatctcagcaacgtcacccgcatatcgatccactggaacatgttgtgctcccaaaacatgctcgtcacgttttc 34693411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 51015452 - 51015375
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51015452 agttgatctcagcaacgtttcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 51015375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 2428662 - 2428585
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  2428662 agttgatctcagcaacgtcacccgcatatcgatccactagaaaatgttgtgctcccaaaacatgttcgtcacgttttc 2428585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 13895914 - 13895991
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  13895914 agttgatctcagcaacgtcacccgcatatcgatccactggaacatgctgtgctcccaaaacatgctcgtcacgttttc 13895991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 44927638 - 44927561
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  44927638 agttgatctcaacaacgtcacccgcatatcgatccactggaacatgttgtgctcccaaaacatgctcgtcacgttttc 44927561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 46414378 - 46414455
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  46414378 agttgatctcagcaacgtcacccgcatatcgatccactagaacatgttgtgctcccaaaacatgctcgtcacgttttc 46414455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 49218780 - 49218857
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  49218780 agttgatctcagcaacgtcactcgcatatcgatccactggaacatgttgcgctcccaaaacatgttcgtcacgttttc 49218857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 55206928 - 55207005
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  55206928 agttgatctcagcaacgtcacccgcatatcgatccactggaacatgttgtgctcccaaaacatgctcgtcacattttc 55207005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 21 - 101
Target Start/End: Original strand, 19453270 - 19453350
Alignment:
Q  21 tttagttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    |||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||| |||||| |||||||||||||    
T  19453270 tttagttgatctcagcaacgtcacccgcatatcgatccattggaacatgttgtgctcccataacatgctcgtcacgttttc 19453350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 21 - 101
Target Start/End: Complemental strand, 27187126 - 27187046
Alignment:
Q  21 tttagttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    |||||||||| ||||||||||  |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  27187126 tttagttgatctcagcaacgttacccgcatatcgatccaatggaacatgttgtgctcccaaaacatgttcgtcatgttttc 27187046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 37281626 - 37281550
Alignment:
Q  25 gttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    |||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  37281626 gttgatctcagcaacgtcacccgcatatcgatccactgaaacatgttgtgctcccaaaacatgctcgtcacgttttc 37281550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 24 - 100
Target Start/End: Original strand, 45100509 - 45100585
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgtttt 100  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  45100509 agttgatctcagcaacgtcacccgcatatcgatccactggaacatgttgtgctcccaaaacatgctcgtcacatttt 45100585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 24 - 100
Target Start/End: Original strand, 46346656 - 46346732
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgtttt 100  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  46346656 agttgatctcagcaacgtcacccgcatatcgatccactggaacatgttgtgctcccagaacatgctcgtcacgtttt 46346732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 24702316 - 24702393
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||| ||||||| || |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  24702316 agttgatctcaacaacgtcacctgcatatcgatccactggaacatgttgtgctcccaaaacatgtccgtcacgttttc 24702393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 34647311 - 34647388
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||    
T  34647311 agttgatctcagcaacgtcacccgcatatcaatccactggaacatgttgtgctcccgaaacatgctcgtcacgttttc 34647388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 39416992 - 39417069
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||  |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  39416992 agttgatctcagcaacgttacccgcatatcgatccactggaacatgttgtgctcccaaaacatgctcatcacgttttc 39417069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 42382446 - 42382369
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||  |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  42382446 agttgatctcagcaacgttacccgcatatcgatccactggaacatgatgtgctcccaaaacatgctcgtcacgttttc 42382369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 42383226 - 42383149
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||  |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  42383226 agttgatctcagcaacgttacccgcatatcgatccactggaacatgatgtgctcccaaaacatgctcgtcacgttttc 42383149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 42950064 - 42950141
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||   ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  42950064 agttgatctcagcaacgtaaaccgcatatcgatccactggaacatgttgtgctcccaaaacatgctcgtcacgttttc 42950141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 48087596 - 48087673
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||  |||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  48087596 agttgatctcagcaacgttacccgcatatcgatccactggaatatgttgtgctcccaaaacatgctcgtcacgttttc 48087673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 97
Target Start/End: Original strand, 51695650 - 51695723
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgt 97  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  51695650 agttgatctcagcaacgtcacccgcatatcgatccactggaacatgatgtgctcccaaaacatgctcgtcacgt 51695723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 21 - 101
Target Start/End: Complemental strand, 14631623 - 14631543
Alignment:
Q  21 tttagttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    |||||||||| ||| ||||||| |||||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||    
T  14631623 tttagttgatctcaacaacgtcacccgcatatcaatccactggaacatgttttgctcccaaaacatgctcgtcacgttttc 14631543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 43477231 - 43477155
Alignment:
Q  25 gttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    |||||| ||| ||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  43477231 gttgatctcatcaacgtcacctgcatatcgatccactggaacatgctgtgctcccaaaacatgttcgtcacgttttc 43477155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 26 - 101
Target Start/End: Complemental strand, 43570083 - 43570008
Alignment:
Q  26 ttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||| ||||||||||  |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  43570083 ttgatctcagcaacgttacccgcatatcgatccactggaacatgctgtgctcccaaaacatgctcgtcacgttttc 43570008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 2646920 - 2646997
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| | |||||| || |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  2646920 agttgatctaagcaacttcacccgcatatcgatccactggaacatgctgtgctcccaaaacatggtcgtcacgttttc 2646997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 3495093 - 3495150
Alignment:
Q  44 cccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  3495093 cccgcatatcgatccactggaacatgttgtgctcccaaaacatggtcgtcacgttttc 3495150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 6464389 - 6464466
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||  ||| |||||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  6464389 agttgatctcagcaacgttacccacatatcgatccactggaacatgttgtgctcccaaaacatgattgtcacgttttc 6464466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 34049902 - 34049825
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| | |||||| || |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  34049902 agttgatctaagcaacttcacccgcatatcgatccactggaacatgctgtgctcccaaaacatggtcgtcacgttttc 34049825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 41578081 - 41578004
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||| | ||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||    
T  41578081 agttgatctcagcaacgtcactcgcatattgatccactggaacatgctgtgctcccaaaacatgctcgtcacgttttc 41578004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 46403178 - 46403101
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| | |||||| || |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  46403178 agttgatctaagcaacttcacccgcatatcgatccactggaacatgctgtgctcccaaaacatggtcgtcacgttttc 46403101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 47065862 - 47065785
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||  |||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||||    
T  47065862 agttgatctcagcaacgttacccgcatatcgatccactagaacatgttgtgctcccaaaacatgctcgtcacattttc 47065785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 49140098 - 49140175
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| | |||||| || |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  49140098 agttgatctaagcaacttcacccgcatatcgatccactggaacatgctgtgctcccaaaacatggtcgtcacgttttc 49140175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 49610664 - 49610587
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||| |||||||||||| ||||||||||||  ||||||||||||||||| |||||||||||||    
T  49610664 agttgatctcagcaacgtcacccgcatatcgacccactggaacatactgtgctcccaaaacatgctcgtcacgttttc 49610587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 50997563 - 50997486
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| | |||||| || |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  50997563 agttgatctaagcaacttcacccgcatatcgatcaactggaacatgttgtgctcccaaaacatgctcgtcacgttttc 50997486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 51013322 - 51013399
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| | ||||||||| ||||||||||||| ||||||||||||||||| |||||||||||| |||||||||||||    
T  51013322 agttgatcttagcaacgtcacccgcatatcgatacactggaacatgttgtgttcccaaaacatgctcgtcacgttttc 51013399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 54390617 - 54390540
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| | |||||| || |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  54390617 agttgatctaagcaacttcacccgcatatcgatccactggaacatgctgtgctcccaaaacatggtcgtcacgttttc 54390540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 24 - 100
Target Start/End: Original strand, 4004131 - 4004207
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgtttt 100  Q
    ||||||| | |||||| || |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  4004131 agttgatctaagcaacttcacccgcatatcgatccactggaacatgctgtgctcccaaaacatgctcgtcacgtttt 4004207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 21 - 101
Target Start/End: Original strand, 47759932 - 47760012
Alignment:
Q  21 tttagttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    |||||||||| ||||||||||| |||| | ||||||||||||||||||| |||| |||||||||||||| |||||||||||    
T  47759932 tttagttgatctcagcaacgtcacccgtacatcgatccactggaacatgctgtgttcccaaaacatgtttgtcacgttttc 47760012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 26 - 101
Target Start/End: Complemental strand, 41804075 - 41804000
Alignment:
Q  26 ttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||| ||| ||||||| | | |||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  41804075 ttgatctcatcaacgtcactctcatatcgatccactggaacatgttgtgctcccaaaacatgctcgtcacgttttc 41804000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 774382 - 774459
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||  ||||||||||||||||||||||||||  ||||||| ||||||||||| ||||||||||    
T  774382 agttgatctcagcaacgttacccgcatatcgatccactggaacatgcagtgctccgaaaacatgttcttcacgttttc 774459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 6754379 - 6754302
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||  |||||||||||||| ||| ||||||||||| ||||||||||||| |||||||||||||    
T  6754379 agttgatctcagcaacgttacccgcatatcgatcaactagaacatgttgtactcccaaaacatgatcgtcacgttttc 6754302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 7954359 - 7954302
Alignment:
Q  44 cccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  7954359 cccgcatatcgatccactggaacatgttgtgctcccaaaacatgctcgtcacattttc 7954302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 25576636 - 25576712
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||  |||||||||||||||| ||||||||| ||||||||||||||||| |||||||||||||    
T  25576636 agttgatctcagcaacgttacccgcatatcgatcca-tggaacatgctgtgctcccaaaacatgctcgtcacgttttc 25576712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 42323433 - 42323510
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||| || |||||||||||||||| ||||| ||| |||||||||||||| |||||||||||||    
T  42323433 agttgatctcagcaacgtcaccagcatatcgatccactgaaacattttgagctcccaaaacatgctcgtcacgttttc 42323510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 49273574 - 49273497
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||| ||| ||||| |||| |||||||||||||||||||||| |||||| |||||||||||||    
T  49273574 agttgatctcagcaacgtcacccacatattgatcaactggaacatgttgtgctcccagaacatgctcgtcacgttttc 49273497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 50458747 - 50458812
Alignment:
Q  36 caacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||| ||||||    
T  50458747 caacgtcacccgcatatctatccactggaacatgttgtgctcccaaaacatgctcgtcaagttttc 50458812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 10053318 - 10053392
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||   ||||||||||||||||| || ||||||||||    
T  10053318 agttgatctcagcaacgtcacccgcatatcgatccactggaaca---tgtgctcccaaaacatgctcatcacgttttc 10053392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 24 - 95
Target Start/End: Original strand, 52569453 - 52569524
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcac 95  Q
    ||||||| ||||||| ||| ||||||||||||| ||| |||||||||||||||||||||||||| |||||||    
T  52569453 agttgatctcagcaatgtcacccgcatatcgattcaccggaacatgttgtgctcccaaaacatgctcgtcac 52569524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 47 - 101
Target Start/End: Original strand, 33449206 - 33449260
Alignment:
Q  47 gcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  33449206 gcatatcgatccactggaacatgatgtgctcccaaaacatgttcttcacgttttc 33449260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 2268538 - 2268615
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| | |||||| || |||||||||||||| ||||||||||| |||||||||||||||||  ||||||||||||    
T  2268538 agttgatctaagcaacttcacccgcatatcgatctactggaacatgatgtgctcccaaaacatgcccgtcacgttttc 2268615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 7246269 - 7246192
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| | ||||||||| ||||||||||||| |||||||||||||| |  |||||||||||| |||||||||||||    
T  7246269 agttgatctaagcaacgtcacccgcatatcgatacactggaacatgttataatcccaaaacatgctcgtcacgttttc 7246192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 30192713 - 30192636
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||| |||||||||||||||||| ||||||| ||| ||||||||||||| | | |||||||||    
T  30192713 agttgatctcagcaacgtcacccgcatatcgatccactagaacatgatgtactcccaaaacatgctagacacgttttc 30192636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 36135182 - 36135105
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| | |||||| || |||||||||||||| |||| |||||| ||||||||||||||||| |||||||||||||    
T  36135182 agttgatctaagcaacttcacccgcatatcgatctactgaaacatgatgtgctcccaaaacatgctcgtcacgttttc 36135105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 36721433 - 36721510
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||| || ||||||||||||||| ||||||||||||||||||||   || |||||||||||||    
T  36721433 agttgatctcagcaacgtcaccagcatatcgatccactagaacatgttgtgctcccaaacattgctcgtcacgttttc 36721510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 53826740 - 53826817
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||  |  ||||||||||||| ||||||||||||||||||||||||||| || |||| |||||    
T  53826740 agttgatctcagcaacgttacatgcatatcgatccattggaacatgttgtgctcccaaaacatgctcatcacattttc 53826817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 44835525 - 44835608
Alignment:
Q  18 atttttagttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||| ||||||| ||| |||| |  |||||||||| ||||||||||||||  | ||||||||||||||| |||||||||||||    
T  44835525 attttcagttgatctcaacaaccttacccgcatatccatccactggaacattctatgctcccaaaacatgctcgtcacgttttc 44835608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 8633423 - 8633480
Alignment:
Q  44 cccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    |||||||||||||||||||||||| |||||  |||||||| || ||||||||||||||    
T  8633423 cccgcatatcgatccactggaacacgttgtcatcccaaaaaatattcgtcacgttttc 8633480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 51 - 97
Target Start/End: Complemental strand, 14265553 - 14265507
Alignment:
Q  51 atcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgt 97  Q
    |||||||||| | ||||||||||| ||||||||||||||||||||||    
T  14265553 atcgatccacggtaacatgttgtggtcccaaaacatgttcgtcacgt 14265507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 86
Target Start/End: Original strand, 20375928 - 20375988
Alignment:
Q  26 ttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacat 86  Q
    ||||| ||||||||||  | |||||||||||| ||| ||||||||||||||| ||||||||    
T  20375928 ttgatctcagcaacgttacacgcatatcgatctacttgaacatgttgtgctctcaaaacat 20375988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 66; Significance: 2e-29; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 27130550 - 27130627
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  27130550 agttgatctcagcaacgtcacccgcatatcgatccactggaacatgttgtgctcccaaaacatgctcgtcacgttttc 27130627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 35491800 - 35491723
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  35491800 agttgatctcagcaacgtcacccgcatatcgatccactggaacatgttgtgctcccaaaacatgctcgtcacgttttc 35491723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 37312536 - 37312613
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  37312536 agttgatctcagcaacgtcacccgcatatcgatccactggaacatgttgtgctcccaaaacatgctcgtcacgttttc 37312613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 29906753 - 29906670
Alignment:
Q  18 atttttagttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||| ||||||| ||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  29906753 attttcagttgatctcagcaacgttacccgcatatcgatccactggaacatgttgtgctcccaaaacatgtttgtcacgttttc 29906670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 6977001 - 6976924
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  6977001 agttgatctcagcaacgtcacccgcatatcgatccactggaacatgctgtgctcccaaaacatgctcgtcacgttttc 6976924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 34521725 - 34521802
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  34521725 agttgatctcaacaacgtcacccgcatatcgatccactggaacatgttgtgctcccaaaacatgctcgtcacgttttc 34521802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 39394056 - 39393979
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  39394056 agttgatctcagcaacgtcacccgcatatcgatccactagaacatgttgtgctcccaaaacatgctcgtcacgttttc 39393979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 29111322 - 29111246
Alignment:
Q  25 gttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    |||||| ||||||||||  |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  29111322 gttgatctcagcaacgttacccgcatatcgatccactggaacatgttgtgctcccaaaacatgctcgtcacgttttc 29111246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 26 - 101
Target Start/End: Original strand, 10364680 - 10364755
Alignment:
Q  26 ttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  10364680 ttgatctcagcaacatcacccgcatatcgatccactggaacatgttgtgctcccaaaacatgctcgtcacgttttc 10364755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 2919406 - 2919483
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||| |||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||    
T  2919406 agttgatctcagcaacgtcacccgcatatcgatctactgtaacatgttgtgctcccaaaacatgctcgtcacgttttc 2919483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 3941902 - 3941825
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  3941902 agttgatctcatcaacgtcacccgcatatcgatccactggaacatgatgtgctcccaaaacatgctcgtcacgttttc 3941825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 5420634 - 5420557
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||    
T  5420634 agttgatatcagcaacgtcacccgcatatcgatccattggaacatgctgtgctcacaaaacatgttcgtcacgttttc 5420557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 10360240 - 10360317
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| |||||||| |  |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  10360240 agttgatctcagcaacattacccgcatatcgatccactggaacatgttgtgctcccaaaacatgctcgtcacgttttc 10360317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 33404180 - 33404103
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||  ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  33404180 agttgatctcagcaacgttacccgcatatcgatccactggaacatcttgtgctcccaaaacatgctcgtcacgttttc 33404103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 41499135 - 41499212
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  41499135 agttgatctcagcaacgtcaccctcatatcgatccactggaacatgctgtgctcccaaaacatgctcgtcacgttttc 41499212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 42241140 - 42241217
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||| |||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||    
T  42241140 agttgatctcagcaacgtcacccgcatatcgatcaactgaaacatgttgtgctcccaaaacatgctcgtcacgttttc 42241217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 3937105 - 3937182
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| | |||||| || |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  3937105 agttgatctaagcaacttcacccgcatatcgatccactggaacatgctgtgctcccaaaacatggtcgtcacgttttc 3937182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 12968343 - 12968420
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||  |||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||    
T  12968343 agttgatctcagcaacgttacccgcatatcgatccaatggaacatgttgtgctcccaaaacatgctcgtaacgttttc 12968420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 17424954 - 17424877
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| | |||||| || |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  17424954 agttgatctaagcaacttcacccgcatatcgatccactagaacatgttgtgctcccaaaacatggtcgtcacgttttc 17424877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 19471675 - 19471752
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| | ||||||||| ||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||    
T  19471675 agttgatcttagcaacgtcacccgcatatcgatacactggaacatgctgtgctcccaaaacatgctcgtcacgttttc 19471752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 40677416 - 40677493
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||| |||||||||||||||||| |||||||| ||||||||| |||||| |||||||||||||    
T  40677416 agttgatctcagcaacgtcacccgcatatcgatccactagaacatgtcgtgctcccagaacatgctcgtcacgttttc 40677493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 43983021 - 43982944
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| | |||||| || |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  43983021 agttgatctaagcaacttcacccgcatatcgatccactggaacatgctgtgctcccaaaacatggtcgtcacgttttc 43982944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 6902131 - 6902054
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||| ||||||  | ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||    
T  6902131 agttgatctcaacaacgttactcgcatatcgattcactggaacatgttgtgctcccaaaacatgctcgtcacgttttc 6902054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 29067894 - 29067817
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| | |||||| || |||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||    
T  29067894 agttgatctaagcaacttcacccgcatatcgatccactggaacatgctgtgctcccaaaacatggtcgtcacattttc 29067817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 42120177 - 42120100
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||  ||| |||||| ||||||||||||||||||||||||||||||||| ||||||| |||||    
T  42120177 agttgatctcagcaacgttacccacatatcaatccactggaacatgttgtgctcccaaaacatgctcgtcacattttc 42120100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 47 - 101
Target Start/End: Complemental strand, 18392179 - 18392125
Alignment:
Q  47 gcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  18392179 gcatatcgatccactggaacatgatgtgctcccaaaacatgctcgtcacgttttc 18392125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 22001999 - 22001922
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| | |||||| || |||||||||||||||| ||||||||| || |||||||||||||| |||||||||||||    
T  22001999 agttgatctaagcaacttcacccgcatatcgatccattggaacatgctgagctcccaaaacatggtcgtcacgttttc 22001922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 32734812 - 32734735
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||| ||||||  ||||||||||||||||||| |||||||||||||||||||||||| | ||||| |||||    
T  32734812 agttgatatcaacaacgttacccgcatatcgatccactgtaacatgttgtgctcccaaaacatgcttgtcacattttc 32734735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 39799903 - 39799960
Alignment:
Q  44 cccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||    
T  39799903 cccgcatatcgatccactggaacatgctgtgctcccaaaacatggtcgtgacgttttc 39799960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 21 - 101
Target Start/End: Complemental strand, 22493439 - 22493359
Alignment:
Q  21 tttagttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    |||||||||| |||| |||||  |||||||||| ||||||||||||||  ||| ||||||||||||| |||||||||||||    
T  22493439 tttagttgatctcaggaacgttacccgcatatcaatccactggaacattctgtactcccaaaacatgctcgtcacgttttc 22493359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 20148275 - 20148206
Alignment:
Q  32 tcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||||||  |||||||||||||| |||||||||||||||||||| |||||||| | |||| ||||||    
T  20148275 tcagcaacgttacccgcatatcgatctactggaacatgttgtgctcctaaaacatgctagtcatgttttc 20148206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 16581989 - 16581910
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatc--gatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||| ||||||||||  |||||| ||||||||| ||||||||||||||||| ||| ||| |||||    
T  16581989 agttgatctcagcaacgtcacccgcatatctcgatccaatggaacatgatgtgctcccaaaacatgctcgacacattttc 16581910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 17796148 - 17796222
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||  |||||||||||||||||| |||||   ||||||||||||||||| || ||||||||||    
T  17796148 agttgatctcagcaacgttacccgcatatcgatccactagaaca---tgtgctcccaaaacatgctcttcacgttttc 17796222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 86
Target Start/End: Complemental strand, 17112451 - 17112399
Alignment:
Q  34 agcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacat 86  Q
    ||||||||| |||||||||| ||||| | |||||| |||||||||||||||||    
T  17112451 agcaacgtcacccgcatatcaatccattagaacatattgtgctcccaaaacat 17112399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 101
Target Start/End: Complemental strand, 34639093 - 34639053
Alignment:
Q  61 tggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||||| ||||||||||||||||| |||||||||||||    
T  34639093 tggaacatgctgtgctcccaaaacatgctcgtcacgttttc 34639053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 9e-29; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 24 - 100
Target Start/End: Original strand, 4724121 - 4724197
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgtttt 100  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  4724121 agttgatctcagcaacgtcacccgcatatcgatccactggaacatgttgtgctcccaaaacatgctcgtcacgtttt 4724197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 35565434 - 35565356
Alignment:
Q  21 tttagttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttt 99  Q
    |||||||||| ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  35565434 tttagttgatctcagcaacgtcacccgcatatcgatccactagaacatgttgtgctcccaaaacatgctcgtcacgttt 35565356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 33370814 - 33370737
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||  |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  33370814 agttgatctcagcaacgttacccgcatatcgatccactggaacatgttgtgctcccaaaacatgctcgtcacgttttc 33370737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 21 - 101
Target Start/End: Original strand, 27661421 - 27661501
Alignment:
Q  21 tttagttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    |||||||||| | |||||| || |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  27661421 tttagttgatctaagcaacttcacccgcatatcgatccactggaacatgttgtgctcccaaaacatggtcgtcacgttttc 27661501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 21 - 101
Target Start/End: Original strand, 35927481 - 35927561
Alignment:
Q  21 tttagttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    |||||||||| ||||||||||| ||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||    
T  35927481 tttagttgatctcagcaacgtcacccgcatatcgatccactgaaagatgatgtgctcccaaaacatgttcgtcacgttttc 35927561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 541682 - 541759
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||    
T  541682 agttgatctcagcaacgtcacccgcatatcgatccactggaacatgatgtgctcccaaaacatgctcgtcccgttttc 541759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 1400349 - 1400426
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||    
T  1400349 agttgatctcagcaacgtcacccgcatatggatccactggaacatgatgtgctcccaaaacatggtcgtcacgttttc 1400426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 1971525 - 1971448
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||  ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  1971525 agttgatctcagcaacgttacccgcatattgatccactggaacatgttgtgctcccaaaacatgctcgtcacgttttc 1971448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 18308420 - 18308343
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  18308420 agttgatctcagcaacatcacccgcatatcgatccactggaacatgttgtgctcccaaaacatgctcgtcatgttttc 18308343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 19036721 - 19036798
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| | |||||| || |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  19036721 agttgatctaagcaacttcacccgcatatcgatccactggaacatgttgtgctcccaaaacatggtcgtcacgttttc 19036798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 24 - 103
Target Start/End: Original strand, 8576188 - 8576267
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttctt 103  Q
    ||||||| | |||||| || ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  8576188 agttgatctaagcaacttcacccgcatatcgatccaccggaacatgttgtgctcccaaaacatggtcgtcacgttttctt 8576267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 7276 - 7353
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| | |||||| || |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  7276 agttgatctaagcaacttcacccgcatatcgatccactggaacatgctgtgctcccaaaacatgctcgtcacgttttc 7353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 8538114 - 8538037
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| | |||||| || |||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  8538114 agttgatctaagcaacttcacccgcatatcgatccactggaacatgttgtgctcccaaaacatgctcgtcatgttttc 8538037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 19400523 - 19400446
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||    
T  19400523 agttgatctcaccaacgtcacccgcatatcgatccactggaacatgctgtgctcccaaaacatgctcgtcacattttc 19400446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 28881151 - 28881074
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| | |||||| || |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  28881151 agttgatctaagcaacttcacccgcatatcgatccactggaacatgctgtgctcccaaaacatggtcgtcacgttttc 28881074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 3601501 - 3601424
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||| ||||||||||||  ||||||||||||||||||||  |||||||| |||||||||||||    
T  3601501 agttgatctcagcaacgtcacccgcatatcgaaacactggaacatgttgtgctcttaaaacatgctcgtcacgttttc 3601424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 11346869 - 11346792
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| | |||||| || | |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  11346869 agttgatctaagcaacttcactcgcatatcgatccactggaacatgctgtgctcccaaaacatgctcgtcacgttttc 11346792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 30709738 - 30709681
Alignment:
Q  44 cccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  30709738 cccgcatatcgatccactggaacatgctgtgctcccaaaacatggtcgtcacgttttc 30709681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 40009688 - 40009611
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||| ||||||  ||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  40009688 agttgatctcaacaacgttacccacatatcgatccactgtaacatgttgtgctcccaaaacatgctcgtcacgttttc 40009611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 27 - 101
Target Start/End: Complemental strand, 3169760 - 3169686
Alignment:
Q  27 tgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    |||| ||||||||||| |||||||| |||||||||||||||||||||||||  |||| ||| |||||||||||||    
T  3169760 tgatctcagcaacgtcacccgcataccgatccactggaacatgttgtgctcttaaaatatgctcgtcacgttttc 3169686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 1694949 - 1694872
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||| ||||||| ||||||||||| |||| || |||||| ||||||||||||||||| |||||||||||||    
T  1694949 agttgatctcaacaacgtcacccgcatatcgttccagtgaaacatgctgtgctcccaaaacatgctcgtcacgttttc 1694872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 11027917 - 11027860
Alignment:
Q  44 cccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||    
T  11027917 cccgcatatcgatccactggaacatgctgtgctcccaaaacatggtcgtgacgttttc 11027860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 38854298 - 38854241
Alignment:
Q  44 cccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||    
T  38854298 cccgcatatcgatccactggaacatgatgtgctcccaaaacatggtcgtgacgttttc 38854241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 21 - 101
Target Start/End: Original strand, 17366780 - 17366860
Alignment:
Q  21 tttagttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    |||||||||| ||| |||||   |||||||||| ||||||| ||||||||||||||||||||||||||| ||||| |||||    
T  17366780 tttagttgatctcaacaacggtacccgcatatcaatccactagaacatgttgtgctcccaaaacatgtttgtcacattttc 17366860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 26 - 101
Target Start/End: Original strand, 6793435 - 6793510
Alignment:
Q  26 ttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||| |||||||| ||  |||||||||||| |||| ||||||||||||||||||||||||| ||||||| |||||    
T  6793435 ttgatctcagcaacctcatccgcatatcgattcactagaacatgttgtgctcccaaaacatgctcgtcacattttc 6793510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 69
Target Start/End: Complemental strand, 7082381 - 7082336
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatg 69  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||    
T  7082381 agttgatctcagcaacgtcacccgcatatcgatccactggaacatg 7082336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 75
Target Start/End: Original strand, 36350361 - 36350412
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgc 75  Q
    ||||||| ||||||||||| ||  ||||||||||||||||||||||||||||    
T  36350361 agttgatctcagcaacgtcacctacatatcgatccactggaacatgttgtgc 36350412  T

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Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 48 - 87
Target Start/End: Complemental strand, 2599355 - 2599316
Alignment:
Q  48 catatcgatccactggaacatgttgtgctcccaaaacatg 87  Q
    ||||||||||||| | ||||||||||||||||||||||||    
T  2599355 catatcgatccacggtaacatgttgtgctcccaaaacatg 2599316  T

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Target: chr6 (Bit Score: 62; Significance: 6e-27; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 801330 - 801253
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  801330 agttgatctcagcaacgtcacccgcatatcgatccactggaacatgctgtgctcccaaaacatggtcgtcacgttttc 801253  T

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Target: chr6; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 13402698 - 13402621
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||    
T  13402698 agttgatctcagcaacgtcacccgcatatcgatccactggaacatgttgggctcccaaaacatgctcgtcacgttttc 13402621  T

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Target: chr6; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 21 - 101
Target Start/End: Original strand, 35058776 - 35058856
Alignment:
Q  21 tttagttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    |||||||||| ||||||||||  |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  35058776 tttagttgatctcagcaacgttacccgcatatcgatccactggaacatgttgtgctcccaaaacatgctcgtaacgttttc 35058856  T

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Target: chr6; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 11692616 - 11692539
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| | |||||| || ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  11692616 agttgatctaagcaacttcacccgcatatcgatccactggaacatgttgtgcttccaaaacatgttcgtcacgttttc 11692539  T

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Target: chr6; HSP #5
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 29108305 - 29108228
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||    
T  29108305 agttgatctcagcaacgtcacccgcatatcgatccactggaacatgctgtgctcccaaaacatgctcttcacgttttc 29108228  T

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Target: chr6; HSP #6
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 32027672 - 32027749
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||| |||||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||    
T  32027672 agttgatctcagcaacgtcacccgcatatcaatccactagaacatgttgtgctcccaaaacatgctcgtcacgttttc 32027749  T

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Target: chr6; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 32037731 - 32037808
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||| |||||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||    
T  32037731 agttgatctcagcaacgtcacccgcatatcaatccactagaacatgttgtgctcccaaaacatgctcgtcacgttttc 32037808  T

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Target: chr6; HSP #8
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 6205649 - 6205572
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| | |||||| || |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  6205649 agttgatctaagcaacttcacccgcatatcgatccactggaacatgctgtgctcccaaaacatggtcgtcacgttttc 6205572  T

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Target: chr6; HSP #9
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 29066718 - 29066641
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| |||||||| || |||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||    
T  29066718 agttgatctcagcaacatcacccgcatatcgatccactggaacatgctgtgctcccaaaacatgctcttcacgttttc 29066641  T

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Target: chr6; HSP #10
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 29075731 - 29075654
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| |||||||| || |||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||    
T  29075731 agttgatctcagcaacatcacccgcatatcgatccactggaacatgctgtgctcccaaaacatgctcttcacgttttc 29075654  T

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Target: chr6; HSP #11
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 29110703 - 29110626
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| |||||||| || |||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||    
T  29110703 agttgatctcagcaacatcacccgcatatcgatccactggaacatgctgtgctcccaaaacatgctcttcacgttttc 29110626  T

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Target: chr6; HSP #12
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 26 - 101
Target Start/End: Original strand, 30257625 - 30257700
Alignment:
Q  26 ttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||| ||||||||||| ||| |||||||||||||| ||||||| ||||||||||||||||| |||||||||||||    
T  30257625 ttgatctcagcaacgtcacccacatatcgatccactagaacatgatgtgctcccaaaacatgctcgtcacgttttc 30257700  T

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Target: chr6; HSP #13
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 12396933 - 12396864
Alignment:
Q  32 tcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||||||  |||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||    
T  12396933 tcagcaacgttacccgcatatcgatccactggaacatgctgtgctcccaaaacatgctcgtcatgttttc 12396864  T

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Target: chr6; HSP #14
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 14115202 - 14115125
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||| ||||||  ||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||    
T  14115202 agttgatctcaacaacgttacccgcatattgatccactggaacatgttgtgctcccagaacatgctcgtcacgttttc 14115125  T

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Target: chr6; HSP #15
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 22305941 - 22305884
Alignment:
Q  44 cccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  22305941 cccgcatatcgatccactggaacatgttgtgctcccaaaacatggtcgtgacgttttc 22305884  T

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Target: chr6; HSP #16
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 27640345 - 27640268
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| | |||||| || |||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||    
T  27640345 agttgatctaagcaacttcacccgcatatcgatccactggaacatgctgtgcttccaaaacatggtcgtcacgttttc 27640268  T

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Target: chr6; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 34802940 - 34803017
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||| |||||||||||||  |||||||||||||||||||||  |||||| || ||||||||||    
T  34802940 agttgatctcagcaacgtcacccgcatatcgatttactggaacatgttgtgctccctgaacatgctcatcacgttttc 34803017  T

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Target: scaffold0589 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 26 - 101
Target Start/End: Complemental strand, 2428 - 2353
Alignment:
Q  26 ttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||| ||| ||||||  |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  2428 ttgatctcatcaacgttacccgcatatcgatccactggaacatgttgtgctcccaaaacatgctcgtcacgttttc 2353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 17961 - 18038
Alignment:
Q  24 agttgatgtcagcaacgtcgcccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||| ||||||||||  ||||||||||||||||||  |||||||||||||||||||||||| || ||||||||||    
T  17961 agttgatctcagcaacgttacccgcatatcgatccactataacatgttgtgctcccaaaacatgctcatcacgttttc 18038  T

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Target: scaffold0181 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 45 - 101
Target Start/End: Complemental strand, 25047 - 24991
Alignment:
Q  45 ccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||| || |||||||| ||||||||||||||||||||||||| ||||||| |||||    
T  25047 ccgcaaatagatccactagaacatgttgtgctcccaaaacatgctcgtcacattttc 24991  T

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Target: scaffold0004 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 101
Target Start/End: Complemental strand, 64095 - 64061
Alignment:
Q  67 atgttgtgctcccaaaacatgttcgtcacgttttc 101  Q
    ||||||||||||||||||||| |||||||||||||    
T  64095 atgttgtgctcccaaaacatgctcgtcacgttttc 64061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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