View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16823_low_24 (Length: 291)
Name: NF16823_low_24
Description: NF16823
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16823_low_24 |
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Alignment Details
Target: chr2 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 1 - 279
Target Start/End: Original strand, 44958899 - 44959177
Alignment:
| Q |
1 |
ataacttcaggagtgaaacagtgtatgaaacatgttatgtgttgaacagaagtacccaaaaaaggttgatatacaaagtcaaatacttaccaaatagaga |
100 |
Q |
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| T |
44958899 |
ataacttcaggagtgaaacagtgtatgaaacatgttatgtgttgaacagaagtacccaaaaaaggttgatatacaaagtcaaatacttaccaaatagaga |
44958998 |
T |
|
| Q |
101 |
tttgtagggaagggtgatgaaagaaaagtgttgaggcttaataaatcactctatggattaaagttagctcctagagcttggaataaaagaattgataact |
200 |
Q |
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| T |
44958999 |
tttgtagggaagggtgatgaaagaaaagtgttgaggcttaataaatcactgtatggattaaagttagctcctagagcttggaataaaagaattgataact |
44959098 |
T |
|
| Q |
201 |
ttatgcaacaaatgagttattccaagtgaaaagtggaatgacatttatgtcaaagactttaatgaagacaaccaagtat |
279 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
44959099 |
ttatgcaacaaatgagttattccaagtgaaaagtggaatgacatttatgtcaaagactttaatcaagacaaccaagtat |
44959177 |
T |
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