View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16823_low_28 (Length: 283)
Name: NF16823_low_28
Description: NF16823
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16823_low_28 |
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Alignment Details
Target: chr1 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 52874764 - 52874504
Alignment:
| Q |
1 |
tagtcaaagatgaaaggaaaggcatagtagcattcatgatgaggtaattcattgattataaatttccaatttaagcatcgttaaaacactagttaaatga |
100 |
Q |
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| T |
52874764 |
tagtcaaagatgaaaggaaaggcatagtagcattcatgatgaggtaattcattgattataaatttccaatttaagcatcgttaaaacactagttaaatga |
52874665 |
T |
|
| Q |
101 |
aagtgtaactttacatcatgatataccaaatgatttaaaagtcactccataacatatttaagaaactatcataaactagtacaaatataaggttacatga |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
52874664 |
aagtgtaactttacatcatgatataccaaatgatttaaaagtcactccataacatatttaagaaactatcataaactagtacaaatataaggttacatga |
52874565 |
T |
|
| Q |
201 |
aaaaaccttgggagataattcattatagcgttcatcaagctgatcacgagcagttaagtct |
261 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
52874564 |
aaaaaccttgggagataattcattatagcgttcatcaagctgatcacgagcagttaagtct |
52874504 |
T |
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