View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16823_low_29 (Length: 280)
Name: NF16823_low_29
Description: NF16823
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16823_low_29 |
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Alignment Details
Target: chr7 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 9 - 262
Target Start/End: Complemental strand, 30880959 - 30880706
Alignment:
| Q |
9 |
tagcaaagggcaagagagtgttggtgttggatcatagcactattaataacgttgatgatataacttgttccttaatggttcagttacagataccacatac |
108 |
Q |
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| T |
30880959 |
tagctaagggcaagagagtgttggtgttggatcatagcactattaataaccttgataatataacttgttccttaatggttcagttacagataccacatac |
30880860 |
T |
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| Q |
109 |
tcttaaaagagaagaatagctcaattctcagtaaaaacttgttaaccaaagttggatcatctgaattctattgaaaccaccttggtcgatagtttggctt |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30880859 |
tcttaaaagagaagaatagctcaattctcagtaaaaacttgttaaccaaagttggatcatctgaattctattgaaaccaccttggtcgatagtttggctt |
30880760 |
T |
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| Q |
209 |
tggcaaaacactcaataaataacatcctagatgatgatcaacatctggctttgg |
262 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30880759 |
tggcaaaacactcaataaataacatcctagatgatgatcaacatctggctttgg |
30880706 |
T |
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