View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16824_high_5 (Length: 237)
Name: NF16824_high_5
Description: NF16824
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16824_high_5 |
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Alignment Details
Target: chr7 (Bit Score: 178; Significance: 4e-96; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 14 - 223
Target Start/End: Original strand, 48166607 - 48166816
Alignment:
| Q |
14 |
aggtgaaaatagactaggttaaactttgctaggctgaacatgacttgctttgaaaatgttaggcttcaatctgtcctattagtctgccataggctcattt |
113 |
Q |
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| T |
48166607 |
aggtgaaaatagactaggttaaactttgctaggctgaacatgacttactttgaaaatgttaggcttcaatctgtcctattagtctgccataggctcattt |
48166706 |
T |
|
| Q |
114 |
ttaaggtttgacctgactttttggtaagtccgtttaatagtctatttcacgannnnnnnngacgaaaaatatacaccactaataatggtgtagactgtca |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |
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| T |
48166707 |
ttaaggtttgacctgactttttggtaagtccgtttaatagtctatttcacgattttttttgacgaaaaatatacaccactaataatggtgtagattgtca |
48166806 |
T |
|
| Q |
214 |
taaataaact |
223 |
Q |
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|||||||||| |
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| T |
48166807 |
taaataaact |
48166816 |
T |
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