View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16825_low_21 (Length: 241)

Name: NF16825_low_21
Description: NF16825
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16825_low_21
NF16825_low_21
[»] chr2 (8 HSPs)
chr2 (46-229)||(45104228-45104411)
chr2 (1-44)||(8710850-8710893)
chr2 (1-44)||(28226126-28226169)
chr2 (1-44)||(11830365-11830408)
chr2 (1-44)||(15604340-15604383)
chr2 (1-42)||(6573050-6573091)
chr2 (1-42)||(8342190-8342231)
chr2 (1-42)||(8342561-8342602)
[»] chr4 (17 HSPs)
chr4 (1-44)||(50504207-50504250)
chr4 (1-44)||(3032583-3032626)
chr4 (1-44)||(27069292-27069335)
chr4 (1-44)||(27149377-27149420)
chr4 (1-44)||(52573610-52573653)
chr4 (1-44)||(54858561-54858604)
chr4 (1-44)||(54858942-54858985)
chr4 (1-55)||(16605592-16605646)
chr4 (1-43)||(45463075-45463117)
chr4 (1-42)||(5818157-5818198)
chr4 (1-42)||(11523952-11523993)
chr4 (1-42)||(39701291-39701332)
chr4 (1-44)||(10407890-10407933)
chr4 (1-44)||(10408271-10408314)
chr4 (1-44)||(52573229-52573272)
chr4 (1-42)||(39667158-39667199)
chr4 (1-42)||(45463455-45463496)
[»] chr1 (18 HSPs)
chr1 (1-44)||(8898899-8898942)
chr1 (1-50)||(37929413-37929462)
chr1 (1-49)||(40714825-40714873)
chr1 (1-44)||(8898518-8898561)
chr1 (1-44)||(17188955-17188998)
chr1 (1-44)||(25885375-25885418)
chr1 (1-44)||(30326497-30326540)
chr1 (1-44)||(40714445-40714488)
chr1 (1-44)||(45750224-45750267)
chr1 (1-44)||(49955729-49955772)
chr1 (1-42)||(35040996-35041037)
chr1 (1-44)||(17189233-17189276)
chr1 (1-44)||(20760887-20760930)
chr1 (1-44)||(28325185-28325228)
chr1 (1-44)||(31050951-31050994)
chr1 (1-44)||(45749843-45749886)
chr1 (1-44)||(49955348-49955391)
chr1 (1-43)||(44523520-44523562)
[»] scaffold0006 (2 HSPs)
scaffold0006 (1-42)||(221794-221835)
scaffold0006 (1-44)||(222171-222214)
[»] chr8 (18 HSPs)
chr8 (1-42)||(42945496-42945537)
chr8 (1-44)||(6472397-6472440)
chr8 (1-44)||(41353955-41353998)
chr8 (1-43)||(8998071-8998113)
chr8 (1-43)||(44664890-44664932)
chr8 (1-42)||(6471693-6471734)
chr8 (1-42)||(8997859-8997900)
chr8 (1-42)||(25124566-25124607)
chr8 (1-44)||(234122-234165)
chr8 (1-44)||(710533-710576)
chr8 (1-44)||(747745-747788)
chr8 (1-44)||(871640-871683)
chr8 (1-44)||(7983429-7983472)
chr8 (1-44)||(15229932-15229975)
chr8 (1-44)||(35634481-35634524)
chr8 (1-44)||(44664509-44664552)
chr8 (1-42)||(10445717-10445758)
chr8 (1-42)||(37542227-37542268)
[»] chr6 (11 HSPs)
chr6 (1-42)||(21836035-21836076)
chr6 (1-44)||(6517504-6517547)
chr6 (1-44)||(7905244-7905287)
chr6 (1-42)||(7160807-7160848)
chr6 (1-42)||(15913551-15913592)
chr6 (1-42)||(22502777-22502818)
chr6 (1-44)||(10781148-10781191)
chr6 (1-44)||(21836412-21836455)
chr6 (1-44)||(22503156-22503199)
chr6 (1-44)||(31406879-31406922)
chr6 (1-42)||(31407260-31407301)
[»] scaffold0771 (2 HSPs)
scaffold0771 (1-44)||(1217-1260)
scaffold0771 (1-44)||(921-964)
[»] chr7 (16 HSPs)
chr7 (1-44)||(25453129-25453172)
chr7 (1-44)||(32934730-32934773)
chr7 (1-44)||(42617912-42617955)
chr7 (1-44)||(43266267-43266310)
chr7 (1-44)||(43266648-43266691)
chr7 (1-42)||(25628481-25628522)
chr7 (1-42)||(42618293-42618334)
chr7 (1-42)||(46204424-46204465)
chr7 (1-40)||(10600031-10600070)
chr7 (1-44)||(22081561-22081604)
chr7 (1-44)||(23058811-23058854)
chr7 (1-44)||(32068478-32068521)
chr7 (1-42)||(10600331-10600372)
chr7 (1-42)||(25453510-25453551)
chr7 (1-42)||(28890582-28890623)
chr7 (1-42)||(32068099-32068140)
[»] chr5 (6 HSPs)
chr5 (1-44)||(17544430-17544473)
chr5 (1-44)||(8875450-8875493)
chr5 (1-44)||(20153297-20153340)
chr5 (1-44)||(33871720-33871763)
chr5 (1-39)||(8875649-8875687)
chr5 (1-42)||(41930869-41930910)
[»] chr3 (20 HSPs)
chr3 (1-44)||(10294568-10294611)
chr3 (1-44)||(13949077-13949120)
chr3 (1-44)||(32306425-32306468)
chr3 (1-44)||(37778655-37778698)
chr3 (1-44)||(40788802-40788845)
chr3 (1-43)||(33506180-33506222)
chr3 (1-42)||(32306806-32306847)
chr3 (1-42)||(33156378-33156419)
chr3 (1-41)||(29118920-29118960)
chr3 (1-44)||(3469201-3469244)
chr3 (1-44)||(3469582-3469625)
chr3 (1-44)||(13948781-13948824)
chr3 (1-44)||(52032521-52032564)
chr3 (1-43)||(11910701-11910743)
chr3 (1-43)||(29118529-29118571)
chr3 (1-43)||(29685943-29685985)
chr3 (5-43)||(29686326-29686364)
chr3 (1-42)||(3596112-3596153)
chr3 (1-42)||(41421975-41422016)
chr3 (1-42)||(52032141-52032182)
[»] scaffold0388 (1 HSPs)
scaffold0388 (1-42)||(12621-12662)
[»] scaffold0328 (1 HSPs)
scaffold0328 (1-44)||(11522-11565)
[»] scaffold0599 (1 HSPs)
scaffold0599 (1-43)||(2395-2437)


Alignment Details
Target: chr2 (Bit Score: 164; Significance: 9e-88; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 46 - 229
Target Start/End: Original strand, 45104228 - 45104411
Alignment:
Q  46 tagttaaattaaacttgtcattttcatttaatatttacttgcatatttgtttttatcaaataacctagaaattggaaatttacttaagataaatatgcgg 145  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  45104228 tagttaaattaaacttgtcattttcatttaatatttacttgcatatttgtttttatcaaataacctagaaattggaaatttacttaagataaataagcgg 45104327  T
Q  146 aaaatctaaagttcaaacttcagtatttatatatcgtaatgtctttgtcaaatgagatattctgcaggaaccaaattgtatttg 229  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| | ||||||||||||||||    
T  45104328 aaaatctaaagttcaaacttcagtatttatatatcgcaatgtctttgtcaactgagatattctgctgtaaccaaattgtatttg 45104411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 8710850 - 8710893
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaagc 44  Q
    ||||||||||||||||||| |||| |||||||||||||||||||    
T  8710850 ttttaaatgacgcctaattgcaaggacgaaacacatcattaagc 8710893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 28226126 - 28226169
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaagc 44  Q
    ||||||||||||||||||| |||| |||||||||||||||||||    
T  28226126 ttttaaatgacgcctaattgcaaggacgaaacacatcattaagc 28226169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 11830408 - 11830365
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaagc 44  Q
    |||||||||||| |||||| |||| |||||||||||||||||||    
T  11830408 ttttaaatgacgtctaattgcaaggacgaaacacatcattaagc 11830365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 15604383 - 15604340
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaagc 44  Q
    ||||||||||| ||||||| |||| |||||||||||||||||||    
T  15604383 ttttaaatgacacctaattgcaaggacgaaacacatcattaagc 15604340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 6573091 - 6573050
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaa 42  Q
    ||||||||||||||||||| || | |||||||||||||||||    
T  6573091 ttttaaatgacgcctaattgcagggacgaaacacatcattaa 6573050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 8342231 - 8342190
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaa 42  Q
    ||||||||||||| ||||| |||| |||||||||||||||||    
T  8342231 ttttaaatgacgcttaattgcaaggacgaaacacatcattaa 8342190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 8342561 - 8342602
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaa 42  Q
    |||||||||||||||||||  ||| |||||||||||||||||    
T  8342561 ttttaaatgacgcctaattgtaaggacgaaacacatcattaa 8342602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 50504207 - 50504250
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaagc 44  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  50504207 ttttaaatgacgcctaattacaaggacgaaacacatcattaagc 50504250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 3032626 - 3032583
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaagc 44  Q
    ||||||||||||||||||| |||| |||||||||||||||||||    
T  3032626 ttttaaatgacgcctaattgcaaggacgaaacacatcattaagc 3032583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 27069292 - 27069335
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaagc 44  Q
    ||||||||||||||||||| |||| |||||||||||||||||||    
T  27069292 ttttaaatgacgcctaattgcaaggacgaaacacatcattaagc 27069335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 27149377 - 27149420
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaagc 44  Q
    ||||||||||||||||||| |||| |||||||||||||||||||    
T  27149377 ttttaaatgacgcctaattgcaaggacgaaacacatcattaagc 27149420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 52573610 - 52573653
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaagc 44  Q
    ||||||||||||||||||| |||| |||||||||||||||||||    
T  52573610 ttttaaatgacgcctaattgcaaggacgaaacacatcattaagc 52573653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 54858604 - 54858561
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaagc 44  Q
    ||||||||||||||||||| |||| |||||||||||||||||||    
T  54858604 ttttaaatgacgcctaattgcaaggacgaaacacatcattaagc 54858561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 54858942 - 54858985
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaagc 44  Q
    ||||||||||||||||||| |||| |||||||||||||||||||    
T  54858942 ttttaaatgacgcctaattgcaaggacgaaacacatcattaagc 54858985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 16605646 - 16605592
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaagcgtagttaaatt 55  Q
    ||||||||||| ||||||| |||| ||||||||||||||||||| || |||||||    
T  16605646 ttttaaatgacacctaattgcaaggacgaaacacatcattaagcctatttaaatt 16605592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 45463117 - 45463075
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaag 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  45463117 ttttaaatgacgcctaattgcaaggacgaaacacatcattaag 45463075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 5818157 - 5818198
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaa 42  Q
    |||||||||||||||||||||||  |||||||||||||||||    
T  5818157 ttttaaatgacgcctaattacaaagacgaaacacatcattaa 5818198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 11523993 - 11523952
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaa 42  Q
    ||||||||||||||||||| |||| |||||||||||||||||    
T  11523993 ttttaaatgacgcctaattgcaaggacgaaacacatcattaa 11523952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 39701291 - 39701332
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaa 42  Q
    ||||||||||||||||||| |||| |||||||||||||||||    
T  39701291 ttttaaatgacgcctaattgcaaggacgaaacacatcattaa 39701332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 10407933 - 10407890
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaagc 44  Q
    ||||||||||| ||||||| |||| |||||||||||||||||||    
T  10407933 ttttaaatgactcctaattgcaaggacgaaacacatcattaagc 10407890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 10408271 - 10408314
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaagc 44  Q
    ||||||||||||||||||| |||| |||||||||| ||||||||    
T  10408271 ttttaaatgacgcctaattgcaaggacgaaacacaacattaagc 10408314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 52573272 - 52573229
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaagc 44  Q
    ||||||||||||||||||| |||  |||||||||||||||||||    
T  52573272 ttttaaatgacgcctaattgcaaagacgaaacacatcattaagc 52573229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 39667158 - 39667199
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaa 42  Q
    ||||||||||| | |||||||||| |||||||||||||||||    
T  39667158 ttttaaatgacccgtaattacaaggacgaaacacatcattaa 39667199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 45463455 - 45463496
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaa 42  Q
    ||||||||||||||||||| |||| |||||||| ||||||||    
T  45463455 ttttaaatgacgcctaattgcaaggacgaaacatatcattaa 45463496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 8898899 - 8898942
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaagc 44  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  8898899 ttttaaatgacgcctaattacaaggacgaaacacatcattaagc 8898942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 37929462 - 37929413
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaagcgtagtt 50  Q
    ||||||||||||||||||| |||| ||||||||||||||||||| |||||    
T  37929462 ttttaaatgacgcctaattgcaaggacgaaacacatcattaagcctagtt 37929413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 40714825 - 40714873
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaagcgtagt 49  Q
    ||||||||||||||||||| |||| ||||||||||||||||||| ||||    
T  40714825 ttttaaatgacgcctaattgcaaggacgaaacacatcattaagcctagt 40714873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 8898561 - 8898518
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaagc 44  Q
    ||||||||||||||||||| |||| |||||||||||||||||||    
T  8898561 ttttaaatgacgcctaattgcaaggacgaaacacatcattaagc 8898518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 17188998 - 17188955
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaagc 44  Q
    ||||||||||||||||||| |||| |||||||||||||||||||    
T  17188998 ttttaaatgacgcctaattgcaaggacgaaacacatcattaagc 17188955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 25885375 - 25885418
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaagc 44  Q
    ||||||||||||||||||| |||| |||||||||||||||||||    
T  25885375 ttttaaatgacgcctaattgcaaggacgaaacacatcattaagc 25885418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 30326540 - 30326497
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaagc 44  Q
    ||||||||||||||||||| |||| |||||||||||||||||||    
T  30326540 ttttaaatgacgcctaattgcaaggacgaaacacatcattaagc 30326497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 40714488 - 40714445
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaagc 44  Q
    ||||||||||||||||||| |||| |||||||||||||||||||    
T  40714488 ttttaaatgacgcctaattgcaaggacgaaacacatcattaagc 40714445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 45750224 - 45750267
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaagc 44  Q
    ||||||||||||||||||| |||| |||||||||||||||||||    
T  45750224 ttttaaatgacgcctaattgcaaggacgaaacacatcattaagc 45750267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 49955729 - 49955772
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaagc 44  Q
    ||||||||||||||||||| |||| |||||||||||||||||||    
T  49955729 ttttaaatgacgcctaattgcaaggacgaaacacatcattaagc 49955772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 35040996 - 35041037
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaa 42  Q
    |||||||||||| ||||||||||| |||||||||||||||||    
T  35040996 ttttaaatgacggctaattacaaggacgaaacacatcattaa 35041037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 17189233 - 17189276
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaagc 44  Q
    |||||||||||| |||||| |||| |||||||||||||||||||    
T  17189233 ttttaaatgacgtctaattgcaaggacgaaacacatcattaagc 17189276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 20760887 - 20760930
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaagc 44  Q
    |||||||||||||||||||  ||| |||||||||||||||||||    
T  20760887 ttttaaatgacgcctaattgtaaggacgaaacacatcattaagc 20760930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 28325185 - 28325228
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaagc 44  Q
    ||||||||||||||||||| ||||  ||||||||||||||||||    
T  28325185 ttttaaatgacgcctaattgcaaggccgaaacacatcattaagc 28325228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 31050994 - 31050951
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaagc 44  Q
    |||||||| |||||||||| |||| |||||||||||||||||||    
T  31050994 ttttaaataacgcctaattgcaaggacgaaacacatcattaagc 31050951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 45749886 - 45749843
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaagc 44  Q
    ||||||||||||||||||| |||| | |||||||||||||||||    
T  45749886 ttttaaatgacgcctaattgcaaggatgaaacacatcattaagc 45749843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 49955391 - 49955348
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaagc 44  Q
    |||||||||| |||||||| |||| |||||||||||||||||||    
T  49955391 ttttaaatgatgcctaattgcaaggacgaaacacatcattaagc 49955348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 44523520 - 44523562
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaag 43  Q
    |||||||||| |||||||| |||| ||||||||||||||||||    
T  44523520 ttttaaatgaggcctaattgcaaggacgaaacacatcattaag 44523562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 221835 - 221794
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaa 42  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  221835 ttttaaatgacgcctaattgcaagaacgaaacacatcattaa 221794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 222171 - 222214
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaagc 44  Q
    ||||||||||||||||||| |||| |||||||||||||||||||    
T  222171 ttttaaatgacgcctaattgcaaggacgaaacacatcattaagc 222214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000001; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 42945496 - 42945537
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaa 42  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  42945496 ttttaaatgacgcctaattgcaagaacgaaacacatcattaa 42945537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 6472397 - 6472440
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaagc 44  Q
    ||||||||||||||||||| |||| |||||||||||||||||||    
T  6472397 ttttaaatgacgcctaattgcaaggacgaaacacatcattaagc 6472440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 41353955 - 41353998
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaagc 44  Q
    |||||||||||||||||||| ||| |||||||||||||||||||    
T  41353955 ttttaaatgacgcctaattataaggacgaaacacatcattaagc 41353998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 8998071 - 8998113
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaag 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  8998071 ttttaaatgacgcctaattgcaaggacgaaacacatcattaag 8998113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 44664890 - 44664932
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaag 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  44664890 ttttaaatgacgcctaattgcaaggacgaaacacatcattaag 44664932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 6471734 - 6471693
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaa 42  Q
    ||||||||||||||||||| |||| |||||||||||||||||    
T  6471734 ttttaaatgacgcctaattgcaaggacgaaacacatcattaa 6471693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 8997900 - 8997859
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaa 42  Q
    ||||||||||||||||||| |||| |||||||||||||||||    
T  8997900 ttttaaatgacgcctaattgcaaggacgaaacacatcattaa 8997859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 25124607 - 25124566
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaa 42  Q
    ||||||||||||||||||| ||||||||||| ||||||||||    
T  25124607 ttttaaatgacgcctaattgcaagaacgaaatacatcattaa 25124566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 234122 - 234165
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaagc 44  Q
    |||||||||| |||||||| |||| |||||||||||||||||||    
T  234122 ttttaaatgatgcctaattgcaaggacgaaacacatcattaagc 234165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 710533 - 710576
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaagc 44  Q
    |||||||||| |||||||| |||| |||||||||||||||||||    
T  710533 ttttaaatgatgcctaattgcaaggacgaaacacatcattaagc 710576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 747745 - 747788
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaagc 44  Q
    |||||||||| |||||||| |||| |||||||||||||||||||    
T  747745 ttttaaatgatgcctaattgcaaggacgaaacacatcattaagc 747788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 871640 - 871683
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaagc 44  Q
    |||||||||| |||||||| |||| |||||||||||||||||||    
T  871640 ttttaaatgatgcctaattgcaaggacgaaacacatcattaagc 871683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 7983472 - 7983429
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaagc 44  Q
    ||||||||||||||||||| |||| ||||||||||| |||||||    
T  7983472 ttttaaatgacgcctaattgcaaggacgaaacacataattaagc 7983429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 15229975 - 15229932
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaagc 44  Q
    ||||||||||||||||||| |||| || ||||||||||||||||    
T  15229975 ttttaaatgacgcctaattgcaaggacaaaacacatcattaagc 15229932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 35634481 - 35634524
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaagc 44  Q
    ||||||||||||| ||||| |||| |||||||||||||||||||    
T  35634481 ttttaaatgacgcttaattgcaaggacgaaacacatcattaagc 35634524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 44664552 - 44664509
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaagc 44  Q
    ||||||||||||||||||| |||| ||||||||||| |||||||    
T  44664552 ttttaaatgacgcctaattgcaaggacgaaacacataattaagc 44664509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 10445717 - 10445758
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaa 42  Q
    ||||||||||| ||||||| |||| |||||||||||||||||    
T  10445717 ttttaaatgacacctaattgcaaggacgaaacacatcattaa 10445758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 37542268 - 37542227
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaa 42  Q
    ||||||||||||||||||| |||  |||||||||||||||||    
T  37542268 ttttaaatgacgcctaattgcaaagacgaaacacatcattaa 37542227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000001; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 21836076 - 21836035
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaa 42  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  21836076 ttttaaatgacgcctaattgcaagaacgaaacacatcattaa 21836035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 6517547 - 6517504
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaagc 44  Q
    ||||||||||||||||||| |||| |||||||||||||||||||    
T  6517547 ttttaaatgacgcctaattgcaaggacgaaacacatcattaagc 6517504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 7905287 - 7905244
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaagc 44  Q
    ||||||||||||||||||| |||| |||||||||||||||||||    
T  7905287 ttttaaatgacgcctaattgcaaggacgaaacacatcattaagc 7905244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 7160848 - 7160807
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaa 42  Q
    ||||||||||||||||||| |||| |||||||||||||||||    
T  7160848 ttttaaatgacgcctaattgcaaggacgaaacacatcattaa 7160807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 15913592 - 15913551
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaa 42  Q
    ||||||||||||||||||| ||| ||||||||||||||||||    
T  15913592 ttttaaatgacgcctaattgcaataacgaaacacatcattaa 15913551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 22502818 - 22502777
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaa 42  Q
    ||||||||||||||||||| |||| |||||||||||||||||    
T  22502818 ttttaaatgacgcctaattgcaaggacgaaacacatcattaa 22502777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 10781191 - 10781148
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaagc 44  Q
    |||||||||||||||||||  ||| |||||||||||||||||||    
T  10781191 ttttaaatgacgcctaattgtaaggacgaaacacatcattaagc 10781148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 21836412 - 21836455
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaagc 44  Q
    ||||||||||||||||||| |||| | |||||||||||||||||    
T  21836412 ttttaaatgacgcctaattgcaaggatgaaacacatcattaagc 21836455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 22503156 - 22503199
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaagc 44  Q
    ||||||||||||||||||| |||| ||||||||||| |||||||    
T  22503156 ttttaaatgacgcctaattgcaaggacgaaacacattattaagc 22503199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 31406922 - 31406879
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaagc 44  Q
    ||||||||||||||||||| |||| ||||||||||| |||||||    
T  31406922 ttttaaatgacgcctaattgcaaggacgaaacacattattaagc 31406879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 31407260 - 31407301
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaa 42  Q
    ||||||||||||||||||| |||| ||||| |||||||||||    
T  31407260 ttttaaatgacgcctaattgcaaggacgaagcacatcattaa 31407301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 1217 - 1260
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaagc 44  Q
    ||||||||||||||||||| |||| |||||||||||||||||||    
T  1217 ttttaaatgacgcctaattgcaaggacgaaacacatcattaagc 1260  T

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Target: scaffold0771; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 964 - 921
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaagc 44  Q
    |||||||||| |||||||| |||| |||||||||||||||||||    
T  964 ttttaaatgatgcctaattgcaaggacgaaacacatcattaagc 921  T

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Target: chr7 (Bit Score: 36; Significance: 0.00000000002; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 25453172 - 25453129
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaagc 44  Q
    ||||||||||||||||||| |||| |||||||||||||||||||    
T  25453172 ttttaaatgacgcctaattgcaaggacgaaacacatcattaagc 25453129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 32934730 - 32934773
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaagc 44  Q
    ||||||||||||||||||| |||| |||||||||||||||||||    
T  32934730 ttttaaatgacgcctaattgcaaggacgaaacacatcattaagc 32934773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 42617955 - 42617912
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaagc 44  Q
    ||||||||||||||||||| |||| |||||||||||||||||||    
T  42617955 ttttaaatgacgcctaattgcaaggacgaaacacatcattaagc 42617912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 43266310 - 43266267
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaagc 44  Q
    ||||||||||||||||||| |||| |||||||||||||||||||    
T  43266310 ttttaaatgacgcctaattgcaaggacgaaacacatcattaagc 43266267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 43266648 - 43266691
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaagc 44  Q
    ||||||||||||||||||| |||| |||||||||||||||||||    
T  43266648 ttttaaatgacgcctaattgcaaggacgaaacacatcattaagc 43266691  T

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Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 25628522 - 25628481
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaa 42  Q
    ||||||||||||||||||| |||| |||||||||||||||||    
T  25628522 ttttaaatgacgcctaattgcaagcacgaaacacatcattaa 25628481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 42618293 - 42618334
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaa 42  Q
    ||||||||||||||||||| |||| |||||||||||||||||    
T  42618293 ttttaaatgacgcctaattgcaaggacgaaacacatcattaa 42618334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 46204465 - 46204424
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaa 42  Q
    ||||||||||||||||||| |||| |||||||||||||||||    
T  46204465 ttttaaatgacgcctaattgcaaggacgaaacacatcattaa 46204424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 10600070 - 10600031
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcatt 40  Q
    ||||||||||||||||||| |||| |||||||||||||||    
T  10600070 ttttaaatgacgcctaattgcaaggacgaaacacatcatt 10600031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 22081604 - 22081561
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaagc 44  Q
    ||||||||||||| ||||| |||| |||||||||||||||||||    
T  22081604 ttttaaatgacgcataattgcaaggacgaaacacatcattaagc 22081561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 23058811 - 23058854
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaagc 44  Q
    |||||||||||||| |||| |||| |||||||||||||||||||    
T  23058811 ttttaaatgacgccgaattgcaaggacgaaacacatcattaagc 23058854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 32068478 - 32068521
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaagc 44  Q
    ||||||||||| ||||||| |||| |||||||||||||||||||    
T  32068478 ttttaaatgactcctaattgcaaggacgaaacacatcattaagc 32068521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 10600331 - 10600372
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaa 42  Q
    ||||||||||||||||||| |||  |||||||||||||||||    
T  10600331 ttttaaatgacgcctaattgcaatgacgaaacacatcattaa 10600372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 25453510 - 25453551
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaa 42  Q
    ||||||||||||| |||||||||  |||||||||||||||||    
T  25453510 ttttaaatgacgcttaattacaaagacgaaacacatcattaa 25453551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 28890623 - 28890582
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaa 42  Q
    |||||||||||| |||||| |||| |||||||||||||||||    
T  28890623 ttttaaatgacgtctaattgcaaggacgaaacacatcattaa 28890582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 32068140 - 32068099
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaa 42  Q
    |||||||||||| |||||| |||| |||||||||||||||||    
T  32068140 ttttaaatgacgtctaattgcaaggacgaaacacatcattaa 32068099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000002; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 17544430 - 17544473
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaagc 44  Q
    ||||||||||||||||||| |||| |||||||||||||||||||    
T  17544430 ttttaaatgacgcctaattgcaaggacgaaacacatcattaagc 17544473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 8875493 - 8875450
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaagc 44  Q
    ||||||||||||| ||||| |||| |||||||||||||||||||    
T  8875493 ttttaaatgacgcttaattgcaaggacgaaacacatcattaagc 8875450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 20153297 - 20153340
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaagc 44  Q
    ||||||||||| ||||||| |||| |||||||||||||||||||    
T  20153297 ttttaaatgacacctaattgcaaggacgaaacacatcattaagc 20153340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 33871720 - 33871763
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaagc 44  Q
    ||||||||| ||||||||| |||| |||||||||||||||||||    
T  33871720 ttttaaatggcgcctaattgcaaggacgaaacacatcattaagc 33871763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 8875649 - 8875687
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcat 39  Q
    ||||||||||||||||||| |||| ||||||||||||||    
T  8875649 ttttaaatgacgcctaattgcaaggacgaaacacatcat 8875687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 41930869 - 41930910
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaa 42  Q
    |||||||||||||||||||||||| || || |||||||||||    
T  41930869 ttttaaatgacgcctaattacaaggactaatcacatcattaa 41930910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000002; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 10294611 - 10294568
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaagc 44  Q
    ||||||||||||||||||| |||| |||||||||||||||||||    
T  10294611 ttttaaatgacgcctaattgcaaggacgaaacacatcattaagc 10294568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 13949077 - 13949120
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaagc 44  Q
    ||||||||||||||||||| |||| |||||||||||||||||||    
T  13949077 ttttaaatgacgcctaattgcaaggacgaaacacatcattaagc 13949120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 32306468 - 32306425
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaagc 44  Q
    ||||||||||||||||||| |||| |||||||||||||||||||    
T  32306468 ttttaaatgacgcctaattgcaaggacgaaacacatcattaagc 32306425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 37778655 - 37778698
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaagc 44  Q
    ||||||||||||||||||| |||| |||||||||||||||||||    
T  37778655 ttttaaatgacgcctaattgcaaggacgaaacacatcattaagc 37778698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 40788802 - 40788845
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaagc 44  Q
    ||||||||||||||||||| |||| |||||||||||||||||||    
T  40788802 ttttaaatgacgcctaattgcaaggacgaaacacatcattaagc 40788845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 33506222 - 33506180
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaag 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  33506222 ttttaaatgacgcctaattgcaaggacgaaacacatcattaag 33506180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 32306806 - 32306847
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaa 42  Q
    ||||||||||||||||||| |||| |||||||||||||||||    
T  32306806 ttttaaatgacgcctaattgcaaggacgaaacacatcattaa 32306847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 33156378 - 33156419
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaa 42  Q
    ||||||||||||||||||| |||| |||||||||||||||||    
T  33156378 ttttaaatgacgcctaattgcaaggacgaaacacatcattaa 33156419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 29118920 - 29118960
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcatta 41  Q
    ||||||||||||||||||| |||| ||||||||||||||||    
T  29118920 ttttaaatgacgcctaattgcaaggacgaaacacatcatta 29118960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 3469244 - 3469201
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaagc 44  Q
    ||||||||||||||||||| |||  |||||||||||||||||||    
T  3469244 ttttaaatgacgcctaattgcaaagacgaaacacatcattaagc 3469201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 3469582 - 3469625
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaagc 44  Q
    ||||||||||||||||||| |||| |||||||| ||||||||||    
T  3469582 ttttaaatgacgcctaattgcaaggacgaaacagatcattaagc 3469625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 13948824 - 13948781
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaagc 44  Q
    |||||||||| |||||||| |||| |||||||||||||||||||    
T  13948824 ttttaaatgatgcctaattgcaaggacgaaacacatcattaagc 13948781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 52032521 - 52032564
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaagc 44  Q
    |||||||||||| |||||| |||| |||||||||||||||||||    
T  52032521 ttttaaatgacgtctaattgcaaggacgaaacacatcattaagc 52032564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 11910743 - 11910701
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaag 43  Q
    |||||||||||| |||||| |||| ||||||||||||||||||    
T  11910743 ttttaaatgacgtctaattgcaaggacgaaacacatcattaag 11910701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 29118571 - 29118529
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaag 43  Q
    ||||||||||||| ||||| |||| ||||||||||||||||||    
T  29118571 ttttaaatgacgcataattgcaaggacgaaacacatcattaag 29118529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 29685985 - 29685943
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaag 43  Q
    ||||||||||||||||||| |||| |||||| |||||||||||    
T  29685985 ttttaaatgacgcctaattgcaaggacgaaatacatcattaag 29685943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 29686326 - 29686364
Alignment:
Q  5 aaatgacgcctaattacaagaacgaaacacatcattaag 43  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  29686326 aaatgacgcctaattgcaaggacgaaacacatcattaag 29686364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 3596153 - 3596112
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaa 42  Q
    |||||||| |||||||||| |||| |||||||||||||||||    
T  3596153 ttttaaatcacgcctaattgcaaggacgaaacacatcattaa 3596112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 41422016 - 41421975
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaa 42  Q
    |||||| |||||||||||| |||| |||||||||||||||||    
T  41422016 ttttaactgacgcctaattgcaaggacgaaacacatcattaa 41421975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 52032182 - 52032141
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaa 42  Q
    ||||||||||||||||||| |||| || ||||||||||||||    
T  52032182 ttttaaatgacgcctaattgcaaggacaaaacacatcattaa 52032141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 12621 - 12662
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaa 42  Q
    ||||||||||||||||||| |||| |||||||||||||||||    
T  12621 ttttaaatgacgcctaattgcaaggacgaaacacatcattaa 12662  T

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Target: scaffold0328 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 11522 - 11565
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaagc 44  Q
    ||||||||||||||||||| |||| | |||||||||||||||||    
T  11522 ttttaaatgacgcctaattgcaaggatgaaacacatcattaagc 11565  T

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Target: scaffold0599 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 2437 - 2395
Alignment:
Q  1 ttttaaatgacgcctaattacaagaacgaaacacatcattaag 43  Q
    |||||||||||| |||||| |||| ||||||||||||||||||    
T  2437 ttttaaatgacgtctaattgcaaggacgaaacacatcattaag 2395  T

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