View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16829_high_8 (Length: 318)
Name: NF16829_high_8
Description: NF16829
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16829_high_8 |
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Alignment Details
Target: chr4 (Bit Score: 211; Significance: 1e-115; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 77 - 308
Target Start/End: Complemental strand, 19277149 - 19276917
Alignment:
| Q |
77 |
ctcagtgttatcttgattttctgagagttgttgggatctgtgttgttcttttgtgcagagagagagttaataatagcatataaagagaccaaacattgtc |
176 |
Q |
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| T |
19277149 |
ctcagtgttatcttgattttctgagagttgttgggatctgtgttgttcttttgtgcagagagagagttaataatagcat-taaagagaccaaacattgtc |
19277051 |
T |
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| Q |
177 |
ttggtttaggagacaaaaagagagagaga--ttaactaaacaacagtgacaaacaaataatagtactagtagttgtttatattaaattaacaaaaccttt |
274 |
Q |
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| T |
19277050 |
ttggtttaggagacaaaaagagagagagagattaactaaacaacagtgacaaacaaataatagtactagtagttgtttacattaaattaacaaaaccttt |
19276951 |
T |
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| Q |
275 |
tgttgaggtgatttggcttttgattgattctgtg |
308 |
Q |
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| T |
19276950 |
tgttgaggtgatttggcttttgattgattctgtg |
19276917 |
T |
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