View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1682_low_10 (Length: 237)

Name: NF1682_low_10
Description: NF1682
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1682_low_10
NF1682_low_10
[»] chr4 (28 HSPs)
chr4 (21-203)||(14136574-14136756)
chr4 (3-186)||(22409323-22409507)
chr4 (3-189)||(41068992-41069179)
chr4 (2-156)||(30537918-30538074)
chr4 (1-186)||(10109216-10109402)
chr4 (9-186)||(32318513-32318690)
chr4 (2-148)||(4960346-4960494)
chr4 (1-72)||(20574848-20574919)
chr4 (101-184)||(53039474-53039557)
chr4 (2-72)||(38794108-38794178)
chr4 (83-156)||(24010263-24010336)
chr4 (34-177)||(11873076-11873220)
chr4 (98-185)||(26533180-26533267)
chr4 (86-156)||(18995246-18995315)
chr4 (1-55)||(30255178-30255232)
chr4 (1-46)||(14958328-14958373)
chr4 (102-183)||(32055098-32055179)
chr4 (1-45)||(41460528-41460572)
chr4 (83-181)||(4960656-4960752)
chr4 (86-156)||(14958401-14958471)
chr4 (1-75)||(18994582-18994656)
chr4 (1-38)||(564101-564138)
chr4 (1-38)||(28675675-28675712)
chr4 (1-38)||(50297627-50297664)
chr4 (125-186)||(50533265-50533326)
chr4 (7-72)||(53039377-53039442)
chr4 (100-192)||(38793713-38793805)
chr4 (3-51)||(42898962-42899010)
[»] chr1 (28 HSPs)
chr1 (1-186)||(3491405-3491590)
chr1 (2-143)||(12521327-12521469)
chr1 (1-177)||(21276532-21276709)
chr1 (2-75)||(13351514-13351587)
chr1 (7-157)||(48022739-48022890)
chr1 (1-186)||(52141468-52141654)
chr1 (2-156)||(5198820-5198977)
chr1 (83-183)||(42596900-42597000)
chr1 (1-129)||(47370284-47370409)
chr1 (83-140)||(25409642-25409699)
chr1 (5-186)||(298196-298380)
chr1 (30-186)||(8550315-8550470)
chr1 (102-186)||(27211299-27211383)
chr1 (5-72)||(943198-943265)
chr1 (103-189)||(38788942-38789027)
chr1 (29-75)||(48722697-48722743)
chr1 (1-72)||(15881093-15881164)
chr1 (86-156)||(47588466-47588536)
chr1 (103-156)||(4051693-4051746)
chr1 (7-68)||(38942759-38942820)
chr1 (103-183)||(50746016-50746096)
chr1 (2-45)||(27211442-27211485)
chr1 (86-191)||(13352301-13352407)
chr1 (162-192)||(40613245-40613275)
chr1 (83-157)||(49872191-49872265)
chr1 (7-72)||(38788843-38788908)
chr1 (102-158)||(26700906-26700962)
chr1 (22-58)||(50176768-50176804)
[»] chr7 (23 HSPs)
chr7 (28-190)||(40211752-40211914)
chr7 (2-186)||(38073565-38073750)
chr7 (2-183)||(38652630-38652806)
chr7 (1-184)||(21148389-21148572)
chr7 (6-184)||(39854083-39854265)
chr7 (1-184)||(8073526-8073710)
chr7 (7-75)||(45513089-45513157)
chr7 (1-191)||(14761734-14761926)
chr7 (86-193)||(41888871-41888978)
chr7 (83-183)||(6647514-6647614)
chr7 (1-72)||(20884448-20884519)
chr7 (83-191)||(37391028-37391136)
chr7 (3-45)||(10679237-10679279)
chr7 (1-47)||(11667119-11667165)
chr7 (102-163)||(33955910-33955971)
chr7 (2-46)||(31009904-31009948)
chr7 (11-74)||(16099254-16099317)
chr7 (97-156)||(31622753-31622812)
chr7 (89-144)||(36446865-36446920)
chr7 (8-38)||(23363867-23363897)
chr7 (5-65)||(6727203-6727263)
chr7 (12-72)||(19044151-19044211)
chr7 (12-72)||(20710425-20710485)
[»] chr3 (24 HSPs)
chr3 (1-185)||(36923499-36923684)
chr3 (2-156)||(28945848-28946002)
chr3 (1-193)||(37238758-37238951)
chr3 (1-185)||(13863581-13863767)
chr3 (1-125)||(43310509-43310636)
chr3 (3-186)||(972408-972592)
chr3 (1-185)||(12568599-12568785)
chr3 (1-185)||(13545063-13545249)
chr3 (9-156)||(52378599-52378748)
chr3 (3-71)||(52915450-52915518)
chr3 (1-156)||(28963354-28963512)
chr3 (8-177)||(50360648-50360819)
chr3 (97-186)||(43310339-43310428)
chr3 (83-193)||(21290205-21290315)
chr3 (100-156)||(50699808-50699864)
chr3 (2-156)||(21490397-21490552)
chr3 (1-45)||(38773649-38773693)
chr3 (1-45)||(51980684-51980728)
chr3 (103-186)||(7681637-7681720)
chr3 (83-153)||(42709898-42709969)
chr3 (86-192)||(11042713-11042818)
chr3 (1-75)||(50524231-50524305)
chr3 (1-34)||(11042882-11042915)
chr3 (3-39)||(13638023-13638059)
[»] chr8 (20 HSPs)
chr8 (1-184)||(11257854-11258037)
chr8 (4-189)||(5895992-5896179)
chr8 (1-174)||(6393549-6393723)
chr8 (2-156)||(38869783-38869939)
chr8 (1-185)||(26014837-26015022)
chr8 (1-186)||(30069693-30069880)
chr8 (83-153)||(41128156-41128226)
chr8 (83-157)||(1042781-1042855)
chr8 (2-156)||(8072433-8072587)
chr8 (1-75)||(36660691-36660765)
chr8 (83-179)||(7107506-7107602)
chr8 (97-185)||(37456103-37456191)
chr8 (7-156)||(16037307-16037457)
chr8 (2-72)||(36068416-36068486)
chr8 (3-45)||(2540250-2540292)
chr8 (2-72)||(9402862-9402932)
chr8 (8-75)||(31410980-31411047)
chr8 (83-185)||(40651605-40651708)
chr8 (147-193)||(43352084-43352130)
chr8 (97-186)||(2539832-2539920)
[»] chr6 (9 HSPs)
chr6 (4-177)||(3213641-3213811)
chr6 (26-156)||(32785782-32785913)
chr6 (1-156)||(33972583-33972739)
chr6 (83-183)||(17506419-17506519)
chr6 (1-72)||(12141684-12141755)
chr6 (1-45)||(154326-154370)
chr6 (7-75)||(8853724-8853792)
chr6 (4-41)||(11109060-11109097)
chr6 (1-45)||(7269668-7269712)
[»] scaffold0007 (1 HSPs)
scaffold0007 (1-186)||(260286-260472)
[»] chr5 (15 HSPs)
chr5 (1-140)||(10044141-10044282)
chr5 (30-189)||(21369107-21369269)
chr5 (29-191)||(17566682-17566846)
chr5 (30-126)||(28024138-28024236)
chr5 (3-185)||(42655897-42656080)
chr5 (49-189)||(32317560-32317702)
chr5 (97-156)||(2903377-2903436)
chr5 (2-45)||(25037236-25037279)
chr5 (1-72)||(25837433-25837504)
chr5 (103-186)||(5402789-5402872)
chr5 (83-185)||(10333780-10333882)
chr5 (83-140)||(16285912-16285969)
chr5 (3-43)||(5511-5551)
chr5 (2-38)||(29429740-29429776)
chr5 (83-187)||(32135803-32135907)
[»] chr2 (17 HSPs)
chr2 (1-186)||(32227432-32227620)
chr2 (5-153)||(41766314-41766463)
chr2 (1-192)||(40534211-40534402)
chr2 (5-185)||(14776270-14776451)
chr2 (83-184)||(32656243-32656344)
chr2 (4-75)||(10500417-10500488)
chr2 (97-183)||(33830309-33830395)
chr2 (5-75)||(41465382-41465452)
chr2 (83-156)||(9374055-9374128)
chr2 (83-160)||(30326107-30326184)
chr2 (122-187)||(43305458-43305523)
chr2 (2-192)||(35327744-35327935)
chr2 (100-156)||(45075680-45075736)
chr2 (4-75)||(27414046-27414117)
chr2 (83-156)||(12497298-12497371)
chr2 (1-45)||(11941627-11941671)
chr2 (3-58)||(33830213-33830268)
[»] scaffold0154 (1 HSPs)
scaffold0154 (83-186)||(36407-36510)
[»] scaffold0524 (1 HSPs)
scaffold0524 (1-153)||(1398-1552)
[»] scaffold0129 (1 HSPs)
scaffold0129 (1-156)||(37553-37708)
[»] scaffold1157 (1 HSPs)
scaffold1157 (83-187)||(1940-2044)
[»] scaffold0061 (1 HSPs)
scaffold0061 (5-72)||(9072-9139)


Alignment Details
Target: chr4 (Bit Score: 138; Significance: 3e-72; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 21 - 203
Target Start/End: Original strand, 14136574 - 14136756
Alignment:
Q  21 ccttaggacacatgttaaacattaatgtcattccattattggtaagaatttattgnnnnnnntaatattaaatatgttgagcaataaattaatataattt 120  Q
    ||||||| |||||||||||||||||| | ||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||    
T  14136574 ccttagggcacatgttaaacattaatattattccattattggtaagaatttattgaaaaaaataatattaaatatgttgagcaataaattaatataattt 14136673  T
Q  121 tcaatacatgatttctattagtagaatttttaacatataccttaagagcacaagttagcatttcccatatttttatgttaagc 203  Q
     ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  14136674 ccaatacatgatttctattagtagaattcttaacatataccttaagggcacaagttagcatttcccatatttttatgttaagc 14136756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 3 - 186
Target Start/End: Original strand, 22409323 - 22409507
Alignment:
Q  3 ggtcatgttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaatttattgnnnnnnnt-aatattaaatatgttgag 101  Q
    |||||||||||||||| ||||||   |||||||||||||||||| ||||||||||| ||||||||||||| ||       | ||||||||| || || ||    
T  22409323 ggtcatgttaacttgtgcccttaatgcacatgttaaacattaatttcattccattaatggtaagaatttaatgaaaaaaattaatattaaacattttaag 22409422  T
Q  102 caataaattaatataattttcaatacatgatttctattagtagaatttttaacatataccttaagagcacaagttagcatttccc 186  Q
    ||||||||||| | ||||| ||||||||||||||||||||||||||| ||||||| | || |||| |||||||||| ||||||||    
T  22409423 caataaattaacacaatttccaatacatgatttctattagtagaattcttaacatgtgccctaagggcacaagttaacatttccc 22409507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 189
Target Start/End: Original strand, 41068992 - 41069179
Alignment:
Q  3 ggtcatgttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaatttattgnnnnnnnt-aatattaaatatgttgag 101  Q
    ||||||| |||||||||| |||| ||||||| |||||||||||||| |||| |||| |||||| |||||||||       | |||||||||||| || ||    
T  41068992 ggtcatgctaacttgtactcttatgacacattttaaacattaatgttattcaattaatggtaaaaatttattgaaaaaaattaatattaaatattttaag 41069091  T
Q  102 caataaattaatataattttcaatacatgatttctattagtagaatttttaacatataccttaagagcacaagttagcatttcccata 189  Q
    ||||||||||| | ||||||||| |||| ||||||||||||| |||| || ||||    |||||| ||||| |||| |||||||||||    
T  41069092 caataaattaacacaattttcaaaacataatttctattagtaaaattctttacatgggtcttaagggcacatgttaacatttcccata 41069179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 156
Target Start/End: Original strand, 30537918 - 30538074
Alignment:
Q  2 gggtcatgttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaatttattg--nnnnnnntaatattaaatatgttg 99  Q
    ||||||||||||||||| |||||||| |||||||||||||||| | |||||||| || ||||||||||||| ||          ||||||||| || |||    
T  30537918 gggtcatgttaacttgttcccttagggcacatgttaaacattagtttcattccaataatggtaagaatttaatggaaaaaaatgaatattaaacattttg 30538017  T
Q  100 agcaataaattaatataattttcaatacatgatttctattagtagaatttttaacat 156  Q
    ||||||||||||| | |||||||||||||| |||||||||| | ||||| |||||||    
T  30538018 agcaataaattaacacaattttcaatacataatttctattaatggaattcttaacat 30538074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 10109402 - 10109216
Alignment:
Q  1 agggtcatgttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaatttattgnnnnnnnt-aatattaaatatgttg 99  Q
    ||||||||||||||||||  | ||||| |||||||||||||||| | ||||| || || |||||| |||||  ||       | ||||||||| || |||    
T  10109402 agggtcatgttaacttgtgtctttagggcacatgttaaacattattttcatttcaataatggtaaaaatttgatgaaaaaagttaatattaaacattttg 10109303  T
Q  100 agcaataaattaatataattttcaatacatgatttctattagtagaatttttaacatataccttaagagcacaagttagcatttccc 186  Q
    ||||||||||||| | |||||||||||||| |||||||||||| ||||| |||| || | || ||||  ||||||||| ||||||||    
T  10109302 agcaataaattaacacaattttcaatacataatttctattagtggaattcttaatatgtgccctaaggacacaagttaacatttccc 10109216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 186
Target Start/End: Complemental strand, 32318690 - 32318513
Alignment:
Q  9 gttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaatttattg-nnnnnnntaatattaaatatgttgagcaataa 107  Q
    |||||||||| |||||||| |||||||||| ||||||||||||| ||||| || ||| |||||||||        |||||||||| || |||| ||||||    
T  32318690 gttaacttgtgcccttagggcacatgttaagcattaatgtcatttcattagtgttaataatttattgaaaaaaattaatattaaacattttgaacaataa 32318591  T
Q  108 attaatataattttcaatacatgatttctattagtagaatttttaacatataccttaagagcacaagttagcatttccc 186  Q
    ||||| | |||||||||||||| |||||||||| |  |||| ||||||| |  | |||| |||||||||| ||||||||    
T  32318590 attaacacaattttcaatacataatttctattaatgaaattcttaacatgtggc-taagggcacaagttaacatttccc 32318513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 148
Target Start/End: Original strand, 4960346 - 4960494
Alignment:
Q  2 gggtcatgttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaatttattg--nnnnnnntaatattaaatatgttg 99  Q
    ||||||| ||||||| | ||||||||||||||||||| ||||||| ||||||||||| |||||| || ||||||          ||||||||| |  |||    
T  4960346 gggtcatattaacttatgcccttaggacacatgttaagcattaatttcattccattaatggtaaaaaattattgaaaaaaaatgaatattaaacaatttg 4960445  T
Q  100 agcaataaattaatataattttcaatacatgatttctattagtagaatt 148  Q
    ||||||||||||| | |||||||||||| | |||||||||||| |||||    
T  4960446 agcaataaattaacacaattttcaatacgtaatttctattagtggaatt 4960494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 20574848 - 20574919
Alignment:
Q  1 agggtcatgttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaattta 72  Q
    |||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||  | |||||||||||    
T  20574848 agggtcatgttaacttgtgcccttagggcacatgttaaacattaatttcattccattgatagtaagaattta 20574919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 101 - 184
Target Start/End: Original strand, 53039474 - 53039557
Alignment:
Q  101 gcaataaattaatataattttcaatacatgatttctattagtagaatttttaacatataccttaagagcacaagttagcatttc 184  Q
    |||||||||||| | |||| ||||||||| ||||||||||||  |||| ||||||| |||||||||||||||||||| ||||||    
T  53039474 gcaataaattaacacaattatcaatacataatttctattagtgaaattcttaacatgtaccttaagagcacaagttaacatttc 53039557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 38794178 - 38794108
Alignment:
Q  2 gggtcatgttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaattta 72  Q
    ||||||||||||||||| |||||||| | |||||||| ||||||| ||||||||||| | |||||||||||    
T  38794178 gggtcatgttaacttgtgcccttagggcccatgttaagcattaatttcattccattaatagtaagaattta 38794108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 156
Target Start/End: Original strand, 24010263 - 24010336
Alignment:
Q  83 taatattaaatatgttgagcaataaattaatataattttcaatacatgatttctattagtagaatttttaacat 156  Q
    |||||||||| || |||  ||||||||||| | |||||||||||||| |||||||||||| ||||| |||||||    
T  24010263 taatattaaacattttggacaataaattaacacaattttcaatacataatttctattagtggaattcttaacat 24010336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 177
Target Start/End: Complemental strand, 11873220 - 11873076
Alignment:
Q  34 gttaaacattaatgtcattccattattggtaagaatttattgnnnnnnnt-aatattaaatatgttgagcaataaattaatataattttcaatacatgat 132  Q
    ||||||||||||||||||||||| | || ||||||||||||        | ||||| |||||| |||| ||||||||||| | |||||  |||| || ||    
T  11873220 gttaaacattaatgtcattccatcaatgataagaatttattaaaaaaaattaatatcaaatattttgaacaataaattaacacaatttctaatatataat 11873121  T
Q  133 ttctattagtagaatttttaacatataccttaagagcacaagtta 177  Q
     ||||| ||| ||||||||||||| |  |||||| ||||||||||    
T  11873120 ctctatcagtggaatttttaacatgtgtcttaagggcacaagtta 11873076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 185
Target Start/End: Original strand, 26533180 - 26533267
Alignment:
Q  98 tgagcaataaattaatataattttcaatacatgatttctattagtagaatttttaacatataccttaagagcacaagttagcatttcc 185  Q
    ||||| ||||||||| | ||||| | |||||| |||||||||||| ||||| ||||||| | || |||| |||||||||| |||||||    
T  26533180 tgagcgataaattaacacaatttccgatacataatttctattagtggaattcttaacatgtgccataagggcacaagttaacatttcc 26533267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 86 - 156
Target Start/End: Original strand, 18995246 - 18995315
Alignment:
Q  86 tattaaatatgttgagcaataaattaatataattttcaatacatgatttctattagtagaatttttaacat 156  Q
    ||||||| || ||||||||||| |||| | ||||||| |||||| |||||||||||||||||| |||||||    
T  18995246 tattaaacattttgagcaataa-ttaacacaattttcgatacataatttctattagtagaattcttaacat 18995315  T

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Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 30255178 - 30255232
Alignment:
Q  1 agggtcatgttaacttgtacccttaggacacatgttaaacattaatgtcattcca 55  Q
    ||||| |||||||||||| |||||||| ||||| |||||||||||| ||||||||    
T  30255178 agggtaatgttaacttgtgcccttagggcacattttaaacattaatttcattcca 30255232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 14958328 - 14958373
Alignment:
Q  1 agggtcatgttaacttgtacccttaggacacatgttaaacattaat 46  Q
    |||||| ||||||||||| |||||||||||||||||| ||||||||    
T  14958328 agggtcttgttaacttgtgcccttaggacacatgttagacattaat 14958373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 183
Target Start/End: Original strand, 32055098 - 32055179
Alignment:
Q  102 caataaattaatataattttcaatacatgatttctattagtagaatttttaacatataccttaagagcacaagttagcattt 183  Q
    ||||||||||| | ||||||| |||||| |||||||||| | |||| |||||||| | | ||||| |||||||||| |||||    
T  32055098 caataaattaacacaattttcgatacataatttctattaatggaatctttaacatgtgctttaagggcacaagttaacattt 32055179  T

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Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 41460528 - 41460572
Alignment:
Q  1 agggtcatgttaacttgtacccttaggacacatgttaaacattaa 45  Q
    |||||||||||||||||| |||||||  |||||||||||||||||    
T  41460528 agggtcatgttaacttgtgcccttagagcacatgttaaacattaa 41460572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 181
Target Start/End: Complemental strand, 4960752 - 4960656
Alignment:
Q  83 taatattaaatatgttgagcaataaattaatataattttcaatacatgatttctattagtagaatttttaacatataccttaagagcacaagttagcat 181  Q
    ||||||| ||||| |||||||||||||||| | |||||| ||||| | |||||||||| | ||||||||| ||| | || |||| | ||||||||||||    
T  4960752 taatattcaatat-ttgagcaataaattaacagaattttaaatac-taatttctattaatcgaatttttatcatgtgccctaagtgtacaagttagcat 4960656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 156
Target Start/End: Original strand, 14958401 - 14958471
Alignment:
Q  86 tattaaatatgttgagcaataaattaatataattttcaatacatgatttctattagtagaatttttaacat 156  Q
    ||||||| | |||||| |||||||| | | |||||||||||||||||| ||||||||  |||| |||||||    
T  14958401 tattaaacaagttgagtaataaattcacacaattttcaatacatgattactattagtgaaattcttaacat 14958471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 18994582 - 18994656
Alignment:
Q  1 agggtcatgttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaatttattg 75  Q
    ||||||||| ||||||||  | ||| ||||||||||||  |||||||||||| || |  ||||||||||||||||    
T  18994582 agggtcatgctaacttgtgtctttatgacacatgttaagtattaatgtcatttcactgatggtaagaatttattg 18994656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 564101 - 564138
Alignment:
Q  1 agggtcatgttaacttgtacccttaggacacatgttaa 38  Q
    ||||| ||||||||||||||||||||| ||||||||||    
T  564101 agggttatgttaacttgtacccttagggcacatgttaa 564138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 28675675 - 28675712
Alignment:
Q  1 agggtcatgttaacttgtacccttaggacacatgttaa 38  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  28675675 agggtcatgttaacttgtgcccttagggcacatgttaa 28675712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 50297627 - 50297664
Alignment:
Q  1 agggtcatgttaacttgtacccttaggacacatgttaa 38  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  50297627 agggtcatgttaacttgtgcccttagggcacatgttaa 50297664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 186
Target Start/End: Complemental strand, 50533326 - 50533265
Alignment:
Q  125 tacatgatttctattagtagaatttttaacatataccttaagagcacaagttagcatttccc 186  Q
    |||||||||||||||| ||||||| ||||||| |||| |||| | ||||||||  |||||||    
T  50533326 tacatgatttctattaatagaattcttaacatgtaccctaagggaacaagttaatatttccc 50533265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 53039377 - 53039442
Alignment:
Q  7 atgttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaattta 72  Q
    ||||||||||||  ||||||| || ||||||| ||||||| ||||| ||||| |||||| ||||||    
T  53039377 atgttaacttgtgtccttagggcatatgttaagcattaatttcatttcattaatggtaaaaattta 53039442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 192
Target Start/End: Complemental strand, 38793805 - 38793713
Alignment:
Q  100 agcaataaattaatataattttcaatacatgatttctattagtagaatttttaacatataccttaagagcacaagttagcatttcccatattt 192  Q
    ||||||||||||| | ||||| |||||||  ||| |||||||| ||||| |||||||    | |||| |||||||||| |||||| |||||||    
T  38793805 agcaataaattaacacaatttacaatacacaattactattagtggaattcttaacatgagtcctaagggcacaagttaacatttctcatattt 38793713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 42898962 - 42899010
Alignment:
Q  3 ggtcatgttaacttgtacccttaggacacatgttaaacattaatgtcat 51  Q
    |||||| |||||||||  ||||||| |||||||||||||||||| ||||    
T  42898962 ggtcatcttaacttgtgtccttagggcacatgttaaacattaatttcat 42899010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 89; Significance: 5e-43; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 3491405 - 3491590
Alignment:
Q  1 agggtcatgttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaatttattgnnnnnnntaatattaaatatgttga 100  Q
    |||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||| ||||||||||||| ||       |||||||||| || ||||    
T  3491405 agggtcatgttaacttgtgcccttagggcacatgttaaacattaatttcattccattaatggtaagaatttaatgaaaaaattaatattaaaaattttga 3491504  T
Q  101 gcaataaattaatataattttcaatacatgatttctattagtagaatttttaacatataccttaagagcacaagttagcatttccc 186  Q
    |||||||||||  | ||||| |||||||| |||||||||||| ||||| ||||||| | || |||| |||||||||| ||||||||    
T  3491505 gcaataaattatcacaatttccaatacataatttctattagtggaattcttaacatttgccctaagggcacaagttaacatttccc 3491590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 2 - 143
Target Start/End: Complemental strand, 12521469 - 12521327
Alignment:
Q  2 gggtcatgttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaattt-attgnnnnnnntaatattaaatatgttga 100  Q
    ||||| ||||||||||| |||| |||||||||||||||||||||| |||||| |||| |||||||||||| |||        |||||||||| || ||||    
T  12521469 gggtcgtgttaacttgtgccctaaggacacatgttaaacattaatttcattctattaatggtaagaatttaattaaaaaaattaatattaaacattttga 12521370  T
Q  101 gcaataaattaatataattttcaatacatgatttctattagta 143  Q
    |||||||||||| |||||||| ||||||| |||||||||||||    
T  12521369 gcaataaattaacataatttttaatacataatttctattagta 12521327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 21276532 - 21276709
Alignment:
Q  1 agggtcatgttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaatttattg-nnnnnnntaatattaaatatgttg 99  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||| |||||| |||| ||||||||||||| ||        |||||||||| || |||    
T  21276532 agggtcatgttaacttgtgcccttaggacacatgttaagcattaatttcattctattaatggtaagaatttaatgaaaaaaattaatattaaacatcttg 21276631  T
Q  100 agcaataaattaatataattttcaatacatgatttctattagtagaatttttaacatataccttaagagcacaagtta 177  Q
     |  ||||||||| | |||||||||||||| |||||||||||| ||||| ||| ||| | || ||||  |||||||||    
T  21276632 cgtgataaattaacacaattttcaatacataatttctattagtggaattcttatcatgtgccctaaggacacaagtta 21276709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 75
Target Start/End: Original strand, 13351514 - 13351587
Alignment:
Q  2 gggtcatgttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaatttattg 75  Q
    |||||||||||| ||||||| ||||| | |||||||||||||||||||||||||||| ||||||||||||||||    
T  13351514 gggtcatgttaatttgtaccattaggccgcatgttaaacattaatgtcattccattaatggtaagaatttattg 13351587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 7 - 157
Target Start/End: Complemental strand, 48022890 - 48022739
Alignment:
Q  7 atgttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaatttattg-nnnnnnntaatattaaatatgttgagcaat 105  Q
    |||||||||||| |||||||| |||||||||||||||||| ||||||||||| ||||||||||||| ||        ||||| |||| || || ||||||    
T  48022890 atgttaacttgtgcccttagggcacatgttaaacattaatttcattccattaatggtaagaatttaatgaaaaaaattaatactaaacatttttagcaat 48022791  T
Q  106 aaattaatataattttcaatacatgatttctattagtagaatttttaacata 157  Q
    || |||| | ||||| |||||||| ||||||||||   ||||| ||||||||    
T  48022790 aatttaacacaatttccaatacataatttctattacaggaattcttaacata 48022739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 52141468 - 52141654
Alignment:
Q  1 agggtcatgttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaatttattg--nnnnnnntaatattaaatatgtt 98  Q
    |||||||||||||||||| |||||||| || ||||||| ||||||| |||||||| || ||||||| ||||| ||         |||||||||| || ||    
T  52141468 agggtcatgttaacttgtgcccttagggcatatgttaagcattaatttcattccactaatggtaagtatttaatgaaaaaaaattaatattaaacatttt 52141567  T
Q  99 gagcaataaattaatataattttcaatacatgatttctattagtagaatttttaacatataccttaagagcacaagttagcatttccc 186  Q
    || ||||||||||| ||||||| |||| ||| ||||  |||| | ||||| ||| ||| | |||||||| ||||||||| ||||||||    
T  52141568 gaacaataaattaacataatttccaatgcataattttcattattggaattcttatcatgtgccttaaga-cacaagttaacatttccc 52141654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 156
Target Start/End: Complemental strand, 5198977 - 5198820
Alignment:
Q  2 gggtcatgttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaatttattg---nnnnnnntaatattaaatatgtt 98  Q
    ||||||| ||||||||| | |||||| |||||||||||||||||| ||||| ||| | ||||||||||||| ||           ||||||||| || ||    
T  5198977 gggtcatattaacttgtgctcttagggcacatgttaaacattaatttcatttcataaatggtaagaatttaatgaaaaaaaaataaatattaaacatttt 5198878  T
Q  99 gagcaataaattaatataattttcaatacatgatttctattagtagaatttttaacat 156  Q
    ||  |||||||||| | ||||| |||||||| |||||||||||||||||| |||||||    
T  5198877 gaataataaattaacacaatttccaatacataatttctattagtagaattcttaacat 5198820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 83 - 183
Target Start/End: Complemental strand, 42597000 - 42596900
Alignment:
Q  83 taatattaaatatgttgagcaataaattaatataattttcaatacatgatttctattagtagaatttttaacatataccttaagagcacaagttagcatt 182  Q
    |||||||||| || || ||||||||||||| | ||| ||||||| ||||||||||||||| ||||| ||||||| |||| | || |||||||||| ||||    
T  42597000 taatattaaacattttaagcaataaattaacacaatattcaatatatgatttctattagtggaattcttaacatgtaccatgagggcacaagttaacatt 42596901  T
Q  183 t 183  Q
    |    
T  42596900 t 42596900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 47370284 - 47370409
Alignment:
Q  1 agggtcatgttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaatttattgnnnnnnntaatattaaatatgttga 100  Q
    ||||||||||||||||||    ||| | |||||||||| ||||||||||||| ||||| ||||||||||||||||       |||||||||| || ||||    
T  47370284 agggtcatgttaacttgtgtaattatggcacatgttaagcattaatgtcatttcattaatggtaagaatttattg---aaattaatattaaacattttga 47370380  T
Q  101 gcaataaattaatataattttcaatacat 129  Q
    ||||||||| || | ||||| ||||||||    
T  47370381 gcaataaatcaacacaatttccaatacat 47370409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 25409642 - 25409699
Alignment:
Q  83 taatattaaatatgttgagcaataaattaatataattttcaatacatgatttctatta 140  Q
    ||||||||||||| |||||||||||||||| | |||||||||||||| ||||||||||    
T  25409642 taatattaaatatcttgagcaataaattaacacaattttcaatacataatttctatta 25409699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 186
Target Start/End: Complemental strand, 298380 - 298196
Alignment:
Q  5 tcatgttaacttgtacccttaggaca-catgttaaacattaatgtcattccattattggtaagaatttattg--nnnnnnntaatattaaatatgttgag 101  Q
    |||||||||||||| |||||| | || |||||||| ||||||| ||||||||||| | ||||||||||| ||         || ||||||| |  |||||    
T  298380 tcatgttaacttgtgcccttaaggcaacatgttaagcattaatttcattccattaatagtaagaatttaatgaaaaaaaattagtattaaacaacttgag 298281  T
Q  102 caataaattaatataattttcaatacatgatttctattagtagaatttttaacatataccttaagagcacaagttagcatttccc 186  Q
     |||||||||| | ||||| |||||||  ||| |||||||| ||||| ||||||| | || |||| |||||||||| ||||||||    
T  298280 taataaattaacacaatttccaatacacaattactattagtggaattcttaacatgtgccctaagggcacaagttaacatttccc 298196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 186
Target Start/End: Original strand, 8550315 - 8550470
Alignment:
Q  30 acatgttaaacattaatgtcattccattattggtaagaatttattgnnnnnnntaatattaaa-tatgttgagcaataaattaatataattttcaataca 128  Q
    ||||||||||||||||| |||||  |||| |||||| |||||||||        ||||||||| ||| || ||||||||||||| | ||||| |||||||    
T  8550315 acatgttaaacattaatttcattt-attaatggtaaaaatttattgaaaaaatgaatattaaactat-ttaagcaataaattaacacaatttccaataca 8550412  T
Q  129 tgatttctattagtagaatttttaacatataccttaagagcacaagttagcatttccc 186  Q
    | |||||||||||| ||||| |||||||||  | || | |||||||||| ||||||||    
T  8550413 taatttctattagtggaattcttaacatatgtcatacgggcacaagttaacatttccc 8550470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 186
Target Start/End: Complemental strand, 27211383 - 27211299
Alignment:
Q  102 caataaattaatataattttcaatacatgatttctattagtagaatttttaacatataccttaagagcacaagttagcatttccc 186  Q
    ||||||||||| ||||||||| |||||| |||||||||||| |||| || ||||| ||||||||| ||| ||||||  |||||||    
T  27211383 caataaattaacataattttcgatacataatttctattagtggaatcttgaacatgtaccttaagggcataagttaatatttccc 27211299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 72
Target Start/End: Complemental strand, 943265 - 943198
Alignment:
Q  5 tcatgttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaattta 72  Q
    |||||||||||||| |||| |||  ||||||||||||||||| ||||||||||| | |||||||||||    
T  943265 tcatgttaacttgtgccctcagggtacatgttaaacattaatttcattccattaatagtaagaattta 943198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 103 - 189
Target Start/End: Original strand, 38788942 - 38789027
Alignment:
Q  103 aataaattaatataattttcaatacatgatttctattagtagaatttttaacatataccttaagagcacaagttagcatttcccata 189  Q
    |||||||||| | ||||| |||||||| ||| ||||||||| |||| |||||||||| |||||| |||||||||| ||||| |||||    
T  38788942 aataaattaacacaatttccaatacataattactattagtaaaattcttaacatata-cttaagggcacaagttaacattttccata 38789027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 48722697 - 48722743
Alignment:
Q  29 cacatgttaaacattaatgtcattccattattggtaagaatttattg 75  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||    
T  48722697 cacatgttaaacattaatttcattccattaatggtaagaatttattg 48722743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 15881093 - 15881164
Alignment:
Q  1 agggtcatgttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaattta 72  Q
    ||||||| ||||||||||||| | |||  |||| |||| ||||||| ||||||||||| |||||||||||||    
T  15881093 agggtcacgttaacttgtaccttaagggtacatattaagcattaatttcattccattaatggtaagaattta 15881164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 86 - 156
Target Start/End: Original strand, 47588466 - 47588536
Alignment:
Q  86 tattaaatatgttgagcaataaattaatataattttcaatacatgatttctattagtagaatttttaacat 156  Q
    ||||||| || ||||  |||||||||| | ||||||||||||||  ||||||||||||||||| |||||||    
T  47588466 tattaaacattttgaataataaattaacacaattttcaatacatagtttctattagtagaattcttaacat 47588536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 156
Target Start/End: Original strand, 4051693 - 4051746
Alignment:
Q  103 aataaattaatataattttcaatacatgatttctattagtagaatttttaacat 156  Q
    |||||||||| | ||||||||||| || |||||||||||||||||| |||||||    
T  4051693 aataaattaacacaattttcaatatataatttctattagtagaattcttaacat 4051746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 38942820 - 38942759
Alignment:
Q  7 atgttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaa 68  Q
    |||||||||||   ||||| |||||||||||| ||||||||||||||||||| | |||||||    
T  38942820 atgttaacttgcgtccttaagacacatgttaagcattaatgtcattccattaatagtaagaa 38942759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 183
Target Start/End: Complemental strand, 50746096 - 50746016
Alignment:
Q  103 aataaattaatataattttcaatacatgatttctattagtagaatttttaacatataccttaagagcacaagttagcattt 183  Q
    |||||||||||||||||||| |||||  |||| ||||||| ||||  ||||||| | |||||||  ||||||||| |||||    
T  50746096 aataaattaatataattttcgatacaatatttatattagtggaatccttaacatgtgccttaaggacacaagttaacattt 50746016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 45
Target Start/End: Complemental strand, 27211485 - 27211442
Alignment:
Q  2 gggtcatgttaacttgtacccttaggacacatgttaaacattaa 45  Q
    ||||||||||||||||| |||||||| |||||||||| ||||||    
T  27211485 gggtcatgttaacttgtgcccttagggcacatgttaagcattaa 27211442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 191
Target Start/End: Original strand, 13352301 - 13352407
Alignment:
Q  86 tattaaatatgttgagcaataaattaatataattttcaatacatgatttctattagt-agaatttttaacatataccttaagagcacaagttagcatttc 184  Q
    ||||||| || |||| ||||||||||| | |||||||||| ||| |||| ||||| |  ||| |||||| || | || |||| |||||||||| ||||||    
T  13352301 tattaaacattttgaacaataaattaacacaattttcaatgcataatttttattaatgggaaattttaaaatgtgccctaagggcacaagttaacatttc 13352400  T
Q  185 ccatatt 191  Q
    |||||||    
T  13352401 ccatatt 13352407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 192
Target Start/End: Complemental strand, 40613275 - 40613245
Alignment:
Q  162 ttaagagcacaagttagcatttcccatattt 192  Q
    |||||||||||||||||||||||||||||||    
T  40613275 ttaagagcacaagttagcatttcccatattt 40613245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 157
Target Start/End: Complemental strand, 49872265 - 49872191
Alignment:
Q  83 taatattaaatatgttgagcaataaattaatataattttcaatacatgatttctattagtagaatttttaacata 157  Q
    ||||||||||| | |||||||||||||||| | ||||||| |||||  |||| ||||||| ||||  ||||||||    
T  49872265 taatattaaattttttgagcaataaattaacacaattttcgatacaacatttttattagtggaatccttaacata 49872191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 38788843 - 38788908
Alignment:
Q  7 atgttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaattta 72  Q
    ||||||||||||  | ||| | |||||||||||||||||| |||||| |||| | |||||||||||    
T  38788843 atgttaacttgtgtcattatggcacatgttaaacattaatttcattctattaatagtaagaattta 38788908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 158
Target Start/End: Complemental strand, 26700962 - 26700906
Alignment:
Q  102 caataaattaatataattttcaatacatgatttctattagtagaatttttaacatat 158  Q
    ||||||||||| | |||||||||||||| |||| ||| | || ||||||||||||||    
T  26700962 caataaattaacacaattttcaatacataatttttatcaatataatttttaacatat 26700906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 50176768 - 50176804
Alignment:
Q  22 cttaggacacatgttaaacattaatgtcattccatta 58  Q
    |||| |||||||||||||||||||||| |||||||||    
T  50176768 cttatgacacatgttaaacattaatgttattccatta 50176804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 74; Significance: 4e-34; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 28 - 190
Target Start/End: Original strand, 40211752 - 40211914
Alignment:
Q  28 acacatgttaaacattaatgtcattccattattggtaagaatttattgnnnnnnntaatattaaatatgttgagcaataaattaatataattttcaatac 127  Q
    ||||||||||| ||||||||| ||||||||| | ||||||||||||||       ||||||||||||| |||||||||||||||| | ||||| ||||||    
T  40211752 acacatgttaagcattaatgttattccattaatagtaagaatttattgaaaaaattaatattaaatattttgagcaataaattaagacaatttccaatac 40211851  T
Q  128 atgatttctattagtagaatttttaacatataccttaagagcacaagttagcatttcccatat 190  Q
    ||||||| || |||||||||||||||||||| |  ||||   |||||||| ||||||||||||    
T  40211852 atgatttataatagtagaatttttaacatatgctctaaggatacaagttaacatttcccatat 40211914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 2 - 186
Target Start/End: Original strand, 38073565 - 38073750
Alignment:
Q  2 gggtcatgttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaatttattg-nnnnnnntaatattaaatatgttga 100  Q
    ||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||| ||||||||||||| ||        ||||| ||||||| ||||    
T  38073565 gggtcatgttaacttgtgcccttagggcacatgttaaacattaatttcattccattaatggtaagaatttaatgaaataaattaatactaaatattttga 38073664  T
Q  101 gcaataaattaatataattttcaatacatgatttctattagtagaatttttaacatataccttaagagcacaagttagcatttccc 186  Q
    |||||||||||| | |||||  ||||||| |||||||||||   |||  ||||||| | || |||| |||||||||| ||||||||    
T  38073665 gcaataaattaacacaatttctaatacataatttctattagagaaatgcttaacatgtgccctaagggcacaagttaacatttccc 38073750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 2 - 183
Target Start/End: Original strand, 38652630 - 38652806
Alignment:
Q  2 gggtcatgttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaatttattgnnnnnnntaatattaaatatgttgag 101  Q
    ||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||        || | | ||||| ||||     
T  38652630 gggtcatgttaacttgtgcccttagggtacatgttaaacattaatgtcattccattagtggtaagaatttattgaaa-----aaaaattaatattttgaa 38652724  T
Q  102 caataaattaatataattttcaatacatgatttctattagtagaatttttaacatataccttaagagcacaagttagcattt 183  Q
    ||||||||||| | | ||| |||||||| |||||||||||| ||||| ||||||| | || ||| ||||||||||| |||||    
T  38652725 caataaattaacacactttccaatacataatttctattagtggaattcttaacatgtgccctaaaagcacaagttaacattt 38652806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 21148572 - 21148389
Alignment:
Q  1 agggtcatgttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaatttattgnnnnnnntaatattaaatatgttga 100  Q
    ||||||||||||| |||| |||| ||| |||||||||||||||||  | |||  |||| ||||||||||||| ||       |||||||||| || ||||    
T  21148572 agggtcatgttaatttgtgccctaagggcacatgttaaacattaactttattttattaatggtaagaatttaatgaaaaaattaatattaaacattttga 21148473  T
Q  101 gcaataaattaatataattttcaatacatgatttctattagtagaatttttaacatataccttaagagcacaagttagcatttc 184  Q
    | |||||||||||| |||||||||||||| |||| ||||||| ||||| ||||||| |  ||||| ||||||| ||| ||||||    
T  21148472 gtaataaattaatacaattttcaatacataatttttattagtggaattcttaacatgtgtcttaaaagcacaacttaacatttc 21148389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 184
Target Start/End: Original strand, 39854083 - 39854265
Alignment:
Q  6 catgttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaattta-ttgnnnnnnn----taatattaaatatgttga 100  Q
    ||||||||||||| |||||||| || ||||||| ||||||| ||||||||||| |||||| |||||| |||           ||||||||||||| ||||    
T  39854083 catgttaacttgtgcccttagggcatatgttaagcattaatttcattccattaatggtaaaaatttaattgaaaaaaaaaattaatattaaatattttga 39854182  T
Q  101 gcaataaattaatataattttcaatacatgatttctattagtagaatttttaacatataccttaagagcacaagttagcatttc 184  Q
     ||||||||||| | |||||||||||||| |||| ||||||||||||| ||||||| | || |||| |||||||||| ||||||    
T  39854183 acaataaattaacacaattttcaatacataatttatattagtagaattcttaacatgtgccctaag-gcacaagttaacatttc 39854265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 8073526 - 8073710
Alignment:
Q  1 agggtcatgttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaatttatt-gnnnnnnntaatattaaatatgttg 99  Q
    ||||||||| |||||||| || || || |||||||||| |||||||||||||||| || |||||||||||||||         |||||||||| || |||    
T  8073526 agggtcatgctaacttgtgcctttggggcacatgttaagcattaatgtcattccactaatggtaagaatttattaaaaaaaattaatattaaacattttg 8073625  T
Q  100 agcaataaattaatataattttcaatacatgatttctattagtagaatttttaacatataccttaagagcacaagttagcatttc 184  Q
    ||| | ||||||| | || |||  | | || ||||||||||||  |||| ||||||| |||| ||||| ||||||||||||||||    
T  8073626 agccaaaaattaacacaaatttttacatataatttctattagtgaaattcttaacatgtaccctaagaacacaagttagcatttc 8073710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 45513089 - 45513157
Alignment:
Q  7 atgttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaatttattg 75  Q
    |||||||||||| |||||| |||||||||||| || |||| ||||||||||| ||||||||||||||||    
T  45513089 atgttaacttgtgcccttaagacacatgttaagcactaatttcattccattaatggtaagaatttattg 45513157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 14761734 - 14761926
Alignment:
Q  1 agggtcatgttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaattta-ttgnnnnnnnt-aatattaaatatgtt 98  Q
    |||||||||||| |||||  ||| | ||||||||||||| |||||| |||||| |||| || |||||||||| |||       | ||||||||| |||||    
T  14761734 agggtcatgttagcttgtgtcctaaagacacatgttaaatattaatttcattctattaatgataagaatttaattgaaaaaaattaatattaaacatgtt 14761833  T
Q  99 gagcaataaattaatataattttcaatacatgatttctattagtagaatttttaacatataccttaagagcacaagttagcatttcccatatt 191  Q
    || |||||||| || | || ||||||||||  |||||||||||||||||| |||| || | |  |||  |||||||||| |||||||| ||||    
T  14761834 gaacaataaataaacacaaatttcaatacaaaatttctattagtagaattcttaatatgtgcactaatggcacaagttatcatttcccttatt 14761926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 86 - 193
Target Start/End: Original strand, 41888871 - 41888978
Alignment:
Q  86 tattaaatatgttgagcaataaattaatataattttcaatacatgatttctattagtagaatttttaacatataccttaagagcacaagttagcatttcc 185  Q
    ||||||| || |||| ||||||||||| | |||||||||| |||||||||||||| | ||||| ||| ||| | || |||| |||||||||| |||||||    
T  41888871 tattaaacattttgaacaataaattaacacaattttcaatgcatgatttctattattggaattcttatcatgtgccctaagggcacaagttaacatttcc 41888970  T
Q  186 catatttt 193  Q
    | ||||||    
T  41888971 cttatttt 41888978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 83 - 183
Target Start/End: Complemental strand, 6647614 - 6647514
Alignment:
Q  83 taatattaaatatgttgagcaataaattaatataattttcaatacatgatttctattagtagaatttttaacatataccttaagagcacaagttagcatt 182  Q
    ||||||||||||| |||| ||||||||||| | ||||||| |||||| |||| |||||||  |||| ||||||||| || ||||  ||||||||| ||||    
T  6647614 taatattaaatattttgaacaataaattaacacaattttctatacataatttttattagtgaaattcttaacatatgccataaggacacaagttaacatt 6647515  T
Q  183 t 183  Q
    |    
T  6647514 t 6647514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 20884448 - 20884519
Alignment:
Q  1 agggtcatgttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaattta 72  Q
    |||||||||||||||||| ||||||||  ||||||||| ||||||| ||||| ||||| | |||||||||||    
T  20884448 agggtcatgttaacttgtgcccttagggtacatgttaagcattaatttcatttcattaatagtaagaattta 20884519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 83 - 191
Target Start/End: Complemental strand, 37391136 - 37391028
Alignment:
Q  83 taatattaaatatgttgagcaataaattaatataattttcaatacatgatttctattagtagaatttttaacatataccttaagagcacaagttagcatt 182  Q
    |||||||||| || |||||||||||||||| | |||||  |||| || ||  |||||| ||||||| ||||||| | ||||||| |||||||||| | ||    
T  37391136 taatattaaacattttgagcaataaattaacacaatttctaataaataataactattaatagaattcttaacatgtgccttaagggcacaagttaacttt 37391037  T
Q  183 tcccatatt 191  Q
    |||| ||||    
T  37391036 tcccttatt 37391028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 10679279 - 10679237
Alignment:
Q  3 ggtcatgttaacttgtacccttaggacacatgttaaacattaa 45  Q
    |||||||||||||||| |||||||| |||||||||||||||||    
T  10679279 ggtcatgttaacttgtgcccttagggcacatgttaaacattaa 10679237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 11667165 - 11667119
Alignment:
Q  1 agggtcatgttaacttgtacccttaggacacatgttaaacattaatg 47  Q
    |||||||||||||||||| |||||||| |||||||||| ||||||||    
T  11667165 agggtcatgttaacttgtgcccttagggcacatgttaagcattaatg 11667119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 163
Target Start/End: Complemental strand, 33955971 - 33955910
Alignment:
Q  102 caataaattaatataattttcaatacatgatttctattagtagaatttttaacatatacctt 163  Q
    ||||||||||| | ||||||||||| || |||| ||||||||||||| ||||||| ||||||    
T  33955971 caataaattaacacaattttcaatatataatttttattagtagaattcttaacatgtacctt 33955910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 31009948 - 31009904
Alignment:
Q  2 gggtcatgttaacttgtacccttaggacacatgttaaacattaat 46  Q
    ||||||||||||||||| ||| || ||||||||||||||||||||    
T  31009948 gggtcatgttaacttgtgcccgtaagacacatgttaaacattaat 31009904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 16099254 - 16099317
Alignment:
Q  11 taacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaatttatt 74  Q
    |||||||| | |||||  ||||||||||  |||||||||||| |||||||| ||||||||||||    
T  16099254 taacttgtgctcttagagcacatgttaagtattaatgtcatttcattattgataagaatttatt 16099317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 156
Target Start/End: Original strand, 31622753 - 31622812
Alignment:
Q  97 ttgagcaataaattaatataattttcaatacatgatttctattagtagaatttttaacat 156  Q
    |||| ||||||||||| | ||||||| |||||| ||||||||||||| | ||||||||||    
T  31622753 ttgaacaataaattaacacaattttcgatacataatttctattagtaaattttttaacat 31622812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 144
Target Start/End: Original strand, 36446865 - 36446920
Alignment:
Q  89 taaatatgttgagcaataaattaatataattttcaatacatgatttctattagtag 144  Q
    ||||||| |||||||||||||||| | || ||||||||||| |||| |||||||||    
T  36446865 taaatattttgagcaataaattaaaacaaatttcaatacataatttttattagtag 36446920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 38
Target Start/End: Complemental strand, 23363897 - 23363867
Alignment:
Q  8 tgttaacttgtacccttaggacacatgttaa 38  Q
    |||||||||||||||||||||||||||||||    
T  23363897 tgttaacttgtacccttaggacacatgttaa 23363867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 6727263 - 6727203
Alignment:
Q  5 tcatgttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaa 65  Q
    ||||||||||||||  ||||| | || ||||||||||||||| ||||| ||||| ||||||    
T  6727263 tcatgttaacttgtgtccttatggcatatgttaaacattaatttcatttcattaatggtaa 6727203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 19044211 - 19044151
Alignment:
Q  12 aacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaattta 72  Q
    |||||||||||  | ||||||| |||||||||||| |||||  |||| |||||||||||||    
T  19044211 aacttgtacccgaatgacacatattaaacattaatatcattgaattaatggtaagaattta 19044151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 20710425 - 20710485
Alignment:
Q  12 aacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaattta 72  Q
    |||||||||||  | ||||||| |||||||||||| |||||  |||| |||||||||||||    
T  20710425 aacttgtacccgaatgacacatattaaacattaatatcattgaattaatggtaagaattta 20710485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 73; Significance: 2e-33; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 36923499 - 36923684
Alignment:
Q  1 agggtcatgttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaatttatt-gnnnnnnntaatattaaatatgttg 99  Q
    |||||||||||||||| | ||||||| ||||||||||||||||||||||||| ||||| |  |||||||||||| |       |||||||||| || |||    
T  36923499 agggtcatgttaacttatgcccttagtacacatgttaaacattaatgtcatttcattactactaagaatttattggaaaaaattaatattaaacattttg 36923598  T
Q  100 agcaataaattaatataattttcaatacatgatttctattagtagaatttttaacatataccttaagagcacaagttagcatttcc 185  Q
    ||||||||||||| | ||||| |||||||| |||||||||||| ||||| |||| || | || ||||||||||| ||| |||||||    
T  36923599 agcaataaattaacacaatttccaatacataatttctattagtggaattcttaatatgtgccctaagagcacaaattaacatttcc 36923684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 2 - 156
Target Start/End: Complemental strand, 28946002 - 28945848
Alignment:
Q  2 gggtcatgttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaatttattgnnnnnnntaatattaaatatgttgag 101  Q
    ||||||||||||||||| |||||| | || ||||||||||||||| ||||||||||| |||||| |||||| ||       |||||||||| || || ||    
T  28946002 gggtcatgttaacttgtgcccttaaggcatatgttaaacattaatttcattccattaatggtaaaaatttaatgaaaaaattaatattaaacattttaag 28945903  T
Q  102 caataaattaatataattttcaatacatgatttctattagtagaatttttaacat 156  Q
    ||||||||||| | ||||| ||||||||||||| ||||||| ||||| |||||||    
T  28945902 caataaattaacacaatttccaatacatgatttttattagtggaattcttaacat 28945848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 37238758 - 37238951
Alignment:
Q  1 agggtcatgttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaatttattgnnnnnnnt-aatattaaatatgttg 99  Q
    |||||||||||||||||| |||||||| |||||||||| ||||||| ||||||||||| |||||| |||||| ||       | ||||||||| || ||     
T  37238758 agggtcatgttaacttgtgcccttagggcacatgttaagcattaatttcattccattaatggtaataatttaatgaaaaatatcaatattaaacatttta 37238857  T
Q  100 agcaataaattaatataattttcaatacatgatttctattagtagaatttttaacatataccttaagagcacaagttagcatttcccatatttt 193  Q
    | ||||||||||| | ||||| ||| | || |||||||||| | ||||| ||||||| | || | || |||||||||| |||||||||||||||    
T  37238858 aacaataaattaacacaatttccaaaaaataatttctattaatggaattcttaacatgtgcccttagggcacaagttaacatttcccatatttt 37238951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 13863581 - 13863767
Alignment:
Q  1 agggtcatgttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaatttattg---nnnnnnntaatattaaatatgt 97  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||| ||||| ||||| | ||||||||||| ||          || ||||||| |  |    
T  13863581 agggtcatgttaacttgtgcccttaggacacatgttaagcattaatttcatttcattaatagtaagaatttaatggaaaaaaaattagtattaaacaact 13863680  T
Q  98 tgagcaataaattaatataattttcaatacatgatttctattagtagaatttttaacatataccttaagagcacaagttagcatttcc 185  Q
    |||| |||||||||| | ||||| |||||||  ||| |||||||| ||||| ||||||| | || |||| |||||||||| |||||||    
T  13863681 tgagtaataaattaacacaatttccaatacacaattactattagtggaattcttaacatgtgccctaag-gcacaagttaacatttcc 13863767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 43310636 - 43310509
Alignment:
Q  1 agggtcatgttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaatttattg---nnnnnnntaatattaaatatgt 97  Q
    ||||||||| |||||||| |||| ||| |||||||||| ||||||||||||||||||| ||| ||||||||||||          |||||||||| || |    
T  43310636 agggtcatgctaacttgtgccctcagggcacatgttaagcattaatgtcattccattaatggaaagaatttattgaaaagaaaaataatattaaacattt 43310537  T
Q  98 tgagcaataaattaatataattttcaat 125  Q
    ||||||||||||||| | ||||||||||    
T  43310536 tgagcaataaattaacacaattttcaat 43310509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 186
Target Start/End: Complemental strand, 972592 - 972408
Alignment:
Q  3 ggtcatgttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaatttattg-nnnnnnntaatattaaatatgttgag 101  Q
    |||||||||||||||| |  ||||| |||||||||| ||||||| ||||| ||||| ||||||||||||| ||        |||||||||| || || |     
T  972592 ggtcatgttaacttgtgcttttagggcacatgttaagcattaatttcatttcattaatggtaagaatttaatgaaaaaaattaatattaaacattttaaa 972493  T
Q  102 caataaattaatataattttcaatacatgatttctattagtagaatttttaacatataccttaagagcacaagttagcatttccc 186  Q
    ||||||||||||| | ||| |||||| | |||| ||||||| ||||| ||||||| | || ||||  ||||||||| ||||||||    
T  972492 caataaattaatacagtttccaatacctaatttttattagtggaattcttaacatgtgccctaaggacacaagttaacatttccc 972408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 12568599 - 12568785
Alignment:
Q  1 agggtcatgttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaatttattgnnnnnnn--taatattaaatatgtt 98  Q
    ||||||||||||| || | | |||||| ||||||||||||| |||| |||||  |||| ||||||||||||||||         || |||||||||| ||    
T  12568599 agggtcatgttaaattatgctcttagggcacatgttaaacactaatttcattttattaatggtaagaatttattgaaaaattaatagtattaaatatttt 12568698  T
Q  99 gagcaataaattaatataattttcaatacatgatttctattagtagaatttttaacatataccttaagagcacaagttagcatttcc 185  Q
    |||||||||||||| | ||||| ||||| || |||| ||||| |  |||| ||||||| | || |||| |||||||||| |||||||    
T  12568699 gagcaataaattaagacaatttacaataaataatttttattaatgaaattcttaacatgtgccctaagggcacaagttaacatttcc 12568785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 13545063 - 13545249
Alignment:
Q  1 agggtcatgttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaatttattgnnnnnnn--taatattaaatatgtt 98  Q
    ||||||||||||| || | | |||||| ||||||||||||| |||| |||||  |||| ||||||||||||||||         || |||||||||| ||    
T  13545063 agggtcatgttaaattatgctcttagggcacatgttaaacactaatttcattttattaatggtaagaatttattgaaaaattaatagtattaaatatttt 13545162  T
Q  99 gagcaataaattaatataattttcaatacatgatttctattagtagaatttttaacatataccttaagagcacaagttagcatttcc 185  Q
    |||||||||||||| | ||||| ||||| || |||| ||||| |  |||| ||||||| | || |||| |||||||||| |||||||    
T  13545163 gagcaataaattaagacaatttacaataaataatttttattaatgaaattcttaacatgtgccctaagggcacaagttaacatttcc 13545249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 9 - 156
Target Start/End: Complemental strand, 52378748 - 52378599
Alignment:
Q  9 gttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaatttattgnnnnnnntaa-tattaaatatgttgagcaa-ta 106  Q
    |||||||||| || ||||| |||||||||||||||||| | ||| | ||| |||| |||||||||||       ||| ||||||| || || ||||| ||    
T  52378748 gttaacttgtgcctttagggcacatgttaaacattaattttatttctttaatggtgagaatttattgaaaaaaataaatattaaacattttaagcaaata 52378649  T
Q  107 aattaatataattttcaatacatgatttctattagtagaatttttaacat 156  Q
    |||||||||||||||||||| || ||| |||||| ||||||| |||||||    
T  52378648 aattaatataattttcaataaataattgctattaatagaattcttaacat 52378599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 52915450 - 52915518
Alignment:
Q  3 ggtcatgttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaattt 71  Q
    |||||||||||||||| | |||| |||||||||||| ||||||||||||| ||||| ||||||||||||    
T  52915450 ggtcatgttaacttgtgctcttatgacacatgttaagcattaatgtcatttcattagtggtaagaattt 52915518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 28963354 - 28963512
Alignment:
Q  1 agggtcatgttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaatttattg---nnnnnnntaatattaaatatgt 97  Q
    ||||||||||||||||||   |||||| |||||||| | ||||||| ||||||||||| ||||||||||||| ||          |||||||||| |  |    
T  28963354 agggtcatgttaacttgtgttcttagggcacatgtttagcattaatttcattccattaatggtaagaatttaatgaaaaaaaaattaatattaaacaatt 28963453  T
Q  98 tgagcaataaattaatataattttcaatacatgatttctattagtagaatttttaacat 156  Q
    | |||||||||||||  |||||| |||| ||| ||||||||||||  ||||||||||||    
T  28963454 taagcaataaattaacttaatttccaatgcatcatttctattagtgaaatttttaacat 28963512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 8 - 177
Target Start/End: Complemental strand, 50360819 - 50360648
Alignment:
Q  8 tgttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaatttattgnnnnnnn--taatattaaatatgttgagcaat 105  Q
    ||||||| |||  |||||||| |||| |||| ||||||| ||||| ||||| ||||||||||| ||||         |||||||||| || |||||||||    
T  50360819 tgttaacctgtgtccttaggatacatattaagcattaatttcatttcattaatggtaagaattaattgaaaaaataataatattaaacattttgagcaat 50360720  T
Q  106 aaattaatataattttcaatacatgatttctattagtagaatttttaacatataccttaagagcacaagtta 177  Q
    ||||||| |  |||||||||| || |||| ||||||||||||| |||| || | || |||| ||||||||||    
T  50360719 aaattaacaccattttcaatatataatttatattagtagaattcttaatatgtgccctaagggcacaagtta 50360648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 97 - 186
Target Start/End: Complemental strand, 43310428 - 43310339
Alignment:
Q  97 ttgagcaataaattaatataattttcaatacatgatttctattagtagaatttttaacatataccttaagagcacaagttagcatttccc 186  Q
    |||||||||||||||| | ||||| |||||||  |||||||||||||||||| ||||||| | |  |||  |||||||||||||||||||    
T  43310428 ttgagcaataaattaacacaatttccaatacaaaatttctattagtagaattcttaacatgtgctctaaaggcacaagttagcatttccc 43310339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 83 - 193
Target Start/End: Original strand, 21290205 - 21290315
Alignment:
Q  83 taatattaaatatgttgagcaataaattaatataattttcaatacatgatttctattagtagaatttttaacatataccttaagagcacaagttagcatt 182  Q
    |||||||| || | || ||||||||||||| ||||||| | |||||| |||||||||| | |||| |||||||| | || |||| |||||| ||| ||||    
T  21290205 taatattatattttttaagcaataaattaacataatttccgatacataatttctattaatggaatatttaacatgtgccataagggcacaaattaacatt 21290304  T
Q  183 tcccatatttt 193  Q
    |||||| ||||    
T  21290305 tcccatttttt 21290315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 100 - 156
Target Start/End: Original strand, 50699808 - 50699864
Alignment:
Q  100 agcaataaattaatataattttcaatacatgatttctattagtagaatttttaacat 156  Q
    ||||||||||||| | ||||| ||||||||||||||||||||| ||||| |||||||    
T  50699808 agcaataaattaacacaatttccaatacatgatttctattagtggaattcttaacat 50699864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 156
Target Start/End: Complemental strand, 21490552 - 21490397
Alignment:
Q  2 gggtcatgttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaattt-attgnnnnnnntaatattaaatatgttga 100  Q
    |||||||||||||| || |  ||| |||||||||||||||||||| |||||  |||| |||||| ||||| ||         |||||||||| || ||||    
T  21490552 gggtcatgttaactcgtgcagttatgacacatgttaaacattaatttcattatattaatggtaaaaatttaataaaaatatttaatattaaacattttga 21490453  T
Q  101 gcaataaattaatataattttcaatacatgatttctattagtagaatttttaacat 156  Q
     ||||||||||| | ||||| ||||| || |||| ||||||| ||||| |||||||    
T  21490452 acaataaattaacacaatttccaatatataatttatattagtggaattcttaacat 21490397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 38773693 - 38773649
Alignment:
Q  1 agggtcatgttaacttgtacccttaggacacatgttaaacattaa 45  Q
    |||||||||||||||||| |||||||| |||||||||| ||||||    
T  38773693 agggtcatgttaacttgtgcccttagggcacatgttaagcattaa 38773649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 51980684 - 51980728
Alignment:
Q  1 agggtcatgttaacttgtacccttaggacacatgttaaacattaa 45  Q
    |||||||||||||||||| |||||||| |||||||||| ||||||    
T  51980684 agggtcatgttaacttgtgcccttagggcacatgttaagcattaa 51980728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 103 - 186
Target Start/End: Original strand, 7681637 - 7681720
Alignment:
Q  103 aataaattaatataattttcaatacatgatttctattagtagaatttttaacatataccttaagagcacaagttagcatttccc 186  Q
    |||||||||| | ||||| |||||||  ||| ||||||||||||||  |||||||| |  |||||||||||||||  |||||||    
T  7681637 aataaattaacacaatttccaatacacaattactattagtagaattcataacatatgctctaagagcacaagttaaaatttccc 7681720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 153
Target Start/End: Original strand, 42709898 - 42709969
Alignment:
Q  83 taatattaaatatgttgagcaataaattaata-taattttcaatacatgatttctattagtagaatttttaa 153  Q
    ||||||||||||| |||| ||||||||||| | |||||| | |||||| |||| ||||||| ||||||||||    
T  42709898 taatattaaatattttgatcaataaattaacactaatttccgatacataatttttattagtggaatttttaa 42709969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 192
Target Start/End: Complemental strand, 11042818 - 11042713
Alignment:
Q  86 tattaaatatgttgagcaataaattaatataattttcaatacatgatttctattagtagaatttttaacatataccttaagagcacaagttagcatttcc 185  Q
    |||||||| | |||||||||||||||| ||||||||  |||||  |||||||||| | ||||  |||||||    ||||||||||||| ||| |||||||    
T  11042818 tattaaattttttgagcaataaattaacataatttttgatacaatatttctattattggaatccttaacat-gcgcttaagagcacaaattaacatttcc 11042720  T
Q  186 catattt 192  Q
    | |||||    
T  11042719 cttattt 11042713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 50524231 - 50524305
Alignment:
Q  1 agggtcatgttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaatttattg 75  Q
    |||||||||||||||| | || |||   ||||||||||| |||||| |||||| |||| |||||| |||||||||    
T  50524231 agggtcatgttaacttatgcctttaaagcacatgttaaatattaatttcattctattaatggtaaaaatttattg 50524305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 11042915 - 11042882
Alignment:
Q  1 agggtcatgttaacttgtacccttaggacacatg 34  Q
    ||||||||||||||||||||||||| ||||||||    
T  11042915 agggtcatgttaacttgtacccttatgacacatg 11042882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 13638059 - 13638023
Alignment:
Q  3 ggtcatgttaacttgtacccttaggacacatgttaaa 39  Q
    ||||||||||||||||||||| ||| |||||||||||    
T  13638059 ggtcatgttaacttgtaccctgagggcacatgttaaa 13638023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 71; Significance: 3e-32; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 11258037 - 11257854
Alignment:
Q  1 agggtcatgttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaatttattgnnnnnnntaatattaaatatgttga 100  Q
    |||||||||||||||||| |||||||| |||||||||||||||| | |||||| | || ||||||||||||| ||       |||||||||| || || |    
T  11258037 agggtcatgttaacttgtgcccttagggcacatgttaaacattattttcattcaaataatggtaagaatttaatgaaaaaattaatattaaacattttaa 11257938  T
Q  101 gcaataaattaatataattttcaatacatgatttctattagtagaatttttaacatataccttaagagcacaagttagcatttc 184  Q
    |||||||||||| | |||||  ||||||| |||||||||||| ||||| ||||||| | || |||| |||||||||| ||||||    
T  11257937 gcaataaattaacacaatttataatacataatttctattagtggaattcttaacatgtgccctaagggcacaagttaacatttc 11257854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 189
Target Start/End: Original strand, 5895992 - 5896179
Alignment:
Q  4 gtcatgttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaatttattgnnnnnnn--taatattaaatatgttgag 101  Q
    ||||| |||||||||||||||||| || ||||||| ||||||| ||||||| ||| | ||||||||||||||         |||||||||| || |||||    
T  5895992 gtcattttaacttgtacccttagggcatatgttaagcattaatttcattcctttaatagtaagaatttattgaaaaaagattaatattaaacattttgag 5896091  T
Q  102 caataaattaatataattttcaatacatgatttctattagtagaatttttaacatataccttaagagcacaagttagcatttcccata 189  Q
    ||||||||||| | ||||||||| | || |||||||||| | |||||||||| || | ||||||| || ||||||| ||||| |||||    
T  5896092 caataaattaacacaattttcaacaaataatttctattaatggaatttttaatatgtgccttaagggcgcaagttaacattttccata 5896179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 6393723 - 6393549
Alignment:
Q  1 agggtcatgttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaatttattg-nnnnnnntaatattaaatatgttg 99  Q
    ||||||||| ||| ||||  ||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||        |||||||||| || |||    
T  6393723 agggtcatgctaatttgtgtccttatgacacatgttaaacattaatgtcattcaattaatggtaagaatttattgtaaaaaattaatattaaacattttg 6393624  T
Q  100 agcaataaattaatataattttcaatacatgatttctattagtagaatttttaacatataccttaagagcacaag 174  Q
    |||| |||||||| | ||||||  |||||| ||||||||||  |||||| ||||||| | || |||| |||||||    
T  6393623 agcagtaaattaacacaattttttatacataatttctattaacagaattcttaacatgtgccctaagtgcacaag 6393549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 2 - 156
Target Start/End: Complemental strand, 38869939 - 38869783
Alignment:
Q  2 gggtcatgttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaatttattg--nnnnnnntaatattaaatatgttg 99  Q
    ||||||||||||||||| |||||| | |||||||||||||||||| ||||||||||| ||||| ||||||||||         |||| ||||| || |||    
T  38869939 gggtcatgttaacttgtgcccttaaggcacatgttaaacattaatttcattccattaatggtatgaatttattgaaaaacaagtaattttaaacattttg 38869840  T
Q  100 agcaataaattaatataattttcaatacatgatttctattagtagaatttttaacat 156  Q
     |||||||||||| | |||||| ||||||| |||||||||||| | ||| |||||||    
T  38869839 tgcaataaattaacacaatttttaatacataatttctattagtggcattcttaacat 38869783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 26014837 - 26015022
Alignment:
Q  1 agggtcatgttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaatttattg-nnnnnnntaatattaaatatgttg 99  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||  |||||||||| | ||||||||||||||        ||| |||||| || |||    
T  26014837 agggtcatgttaacttgtacccttagggcacatgttaagcattaatagcattccattaatagtaagaatttattgaaaaaaattaacattaaacattttg 26014936  T
Q  100 agcaataaattaatataattttcaatacatgatttctattagtagaatttttaacatataccttaagagcacaagttagcatttcc 185  Q
    |  |||||||||| | || || |||||||| |||||||||| | | ||| |||| || |||||| ||| |||||| || |||||||    
T  26014937 aataataaattaacacaaattccaatacataatttctattaatggtattcttaatatgtacctttagaacacaagctatcatttcc 26015022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 30069693 - 30069880
Alignment:
Q  1 agggtcatgttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaatttattg--nnnnnnntaatattaaatatgtt 98  Q
    |||||||||||||||||| | |||||| |||||||||| |||| || ||||||||||| |  |||||||||| ||         || ||||||| |  ||    
T  30069693 agggtcatgttaacttgtgctcttagggcacatgttaagcatttatttcattccattaataataagaatttaatggaaaaaagttagtattaaacaactt 30069792  T
Q  99 gagcaataaattaatataattttcaatacatgatttctattagtagaatttttaacatataccttaagagcacaagttagcatttccc 186  Q
    ||| |||||||||| | ||||| |||||||  ||| |||||||| ||||| ||||||| | ||||||| |||||||||| ||||||||    
T  30069793 gagtaataaattaacacaatttccaatacacaattactattagtggaattcttaacatgtgccttaagggcacaagttaacatttccc 30069880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 83 - 153
Target Start/End: Complemental strand, 41128226 - 41128156
Alignment:
Q  83 taatattaaatatgttgagcaataaattaatataattttcaatacatgatttctattagtagaatttttaa 153  Q
    ||||||||||||| |||||||||||||||| |||||||||||||||| |||| ||||||| ||||| ||||    
T  41128226 taatattaaatattttgagcaataaattaacataattttcaatacataatttatattagtggaattcttaa 41128156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 83 - 157
Target Start/End: Original strand, 1042781 - 1042855
Alignment:
Q  83 taatattaaatatgttgagcaataaattaatataattttcaatacatgatttctattagtagaatttttaacata 157  Q
    |||||||||| || || ||||||||||||| | |||||||||||||| ||||||||||||  |||||||||||||    
T  1042781 taatattaaacattttaagcaataaattaacacaattttcaatacataatttctattagtgaaatttttaacata 1042855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 156
Target Start/End: Original strand, 8072433 - 8072587
Alignment:
Q  2 gggtcatgttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaatttattgnnnnnnnt-aatattaaatatgttga 100  Q
    |||||||||||| || | |||||||| |||||||||| ||||| | |||||| | || ||||||||||||| ||       | ||||||||| || ||||    
T  8072433 gggtcatgttaattt-tgcccttagggcacatgttaagcattattttcattcaaataatggtaagaatttaatgaaaaaaattaatattaaacattttga 8072531  T
Q  101 gcaataaattaatataattttcaatacatgatttctattagtagaatttttaacat 156  Q
     | ||||||||| | |||||||||||||| |||||||||||| ||||| |||||||    
T  8072532 accataaattaacacaattttcaatacataatttctattagtggaattcttaacat 8072587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 36660765 - 36660691
Alignment:
Q  1 agggtcatgttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaatttattg 75  Q
    |||||||||||||||||| |||||| | || ||||||| ||||||| || |||||||| ||||||||||||||||    
T  36660765 agggtcatgttaacttgtgcccttaaggcatatgttaaccattaatttcgttccattaatggtaagaatttattg 36660691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 83 - 179
Target Start/End: Original strand, 7107506 - 7107602
Alignment:
Q  83 taatattaaatatgttgagcaataaattaatataattttcaatacatgatttctattagtagaatttttaacatataccttaagagcacaagttagc 179  Q
    ||||||| || || |||||||||||||| | | ||||| |||||||| |||||||||||| ||||| ||||||| | || |||| ||||||||||||    
T  7107506 taatattcaacattttgagcaataaatttacacaatttccaatacataatttctattagtggaattcttaacatgtgccataagggcacaagttagc 7107602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 97 - 185
Target Start/End: Original strand, 37456103 - 37456191
Alignment:
Q  97 ttgagcaataaattaatataattttcaatacatgatttctattagtagaatttttaacatataccttaagagcacaagttagcatttcc 185  Q
    ||||| |||||||||| | ||||| |||||||| |||||||||||| ||||| ||||||  | || |||| ||||||||||||||||||    
T  37456103 ttgagtaataaattaacacaatttccaatacataatttctattagtggaattcttaacacgtgccctaagggcacaagttagcatttcc 37456191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 156
Target Start/End: Complemental strand, 16037457 - 16037307
Alignment:
Q  7 atgttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaatttattgnnnnnnnt--aatattaaatatgttgagcaa 104  Q
    |||||||||||  |||||| |||||||||||||||||| || |||||||||| |||||  ||||||||        |  ||||||||| || |||| |||    
T  16037457 atgttaacttgcgcccttaagacacatgttaaacatta-tggcattccattaatggtagaaatttatttcaaaaaatttaatattaaacattttgaccaa 16037359  T
Q  105 taaattaatataattttcaatacatgatttctattagtagaatttttaacat 156  Q
    |||||||||| ||||| | |||||| |||||||| ||| ||||| |||||||    
T  16037358 taaattaatacaatttccgatacataatttctatcagtggaattcttaacat 16037307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 36068486 - 36068416
Alignment:
Q  2 gggtcatgttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaattta 72  Q
    ||||||||||||||||| |||| | |||||||||||| ||||| | |||||||| || |||||||||||||    
T  36068486 gggtcatgttaacttgtgccctcaagacacatgttaagcattattttcattccaataatggtaagaattta 36068416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 2540292 - 2540250
Alignment:
Q  3 ggtcatgttaacttgtacccttaggacacatgttaaacattaa 45  Q
    |||||||||||||||||||||||| ||||||||||| ||||||    
T  2540292 ggtcatgttaacttgtacccttagaacacatgttaagcattaa 2540250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 72
Target Start/End: Original strand, 9402862 - 9402932
Alignment:
Q  2 gggtcatgttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaattta 72  Q
    ||||||||||||||| | |||||||| |||||||||| ||||| | ||||| || || |||||||||||||    
T  9402862 gggtcatgttaacttctgcccttagggcacatgttaagcattattttcatttcaataatggtaagaattta 9402932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 75
Target Start/End: Complemental strand, 31411047 - 31410980
Alignment:
Q  8 tgttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaatttattg 75  Q
    |||||||||||||| |||||  ||||||||| ||||||| ||||| | ||| | ||||||||||||||    
T  31411047 tgttaacttgtaccattagggtacatgttaagcattaatttcatttctttaatagtaagaatttattg 31410980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 185
Target Start/End: Complemental strand, 40651708 - 40651605
Alignment:
Q  83 taatattaaatatgttgagcaataaattaatataattttcaatacatgatttctattagtagaatt-tttaacatataccttaagagcacaagttagcat 181  Q
    |||||||||| || ||||| ||||||| | || |||||||||||||| |||| ||| | | ||||| |||||||| |||| |||  |||||||||| |||    
T  40651708 taatattaaacattttgagtaataaataattacaattttcaatacataatttttatcaatggaattctttaacatgtaccctaaaggcacaagttaacat 40651609  T
Q  182 ttcc 185  Q
    ||||    
T  40651608 ttcc 40651605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 193
Target Start/End: Original strand, 43352084 - 43352130
Alignment:
Q  147 tttttaacatataccttaagagcacaagttagcatttcccatatttt 193  Q
    |||| ||| ||| ||||||| ||||||||||||||||||||||||||    
T  43352084 ttttgaacttatgccttaagggcacaagttagcatttcccatatttt 43352130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 186
Target Start/End: Complemental strand, 2539920 - 2539832
Alignment:
Q  97 ttgagcaataaattaatataattttcaatacatgatttctattagtagaatttttaacatataccttaagagcacaagttagcatttccc 186  Q
    |||||||||||||||||  ||||||| | |||| |||||||||| || || | ||||||| | || |||| |||||||||| ||||||||    
T  2539920 ttgagcaataaattaatgcaattttcgagacataatttctattaata-aaatcttaacatgtgccataagggcacaagttaacatttccc 2539832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 2e-30; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 4 - 177
Target Start/End: Original strand, 3213641 - 3213811
Alignment:
Q  4 gtcatgttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaatttattgnnnnnnntaatattaaatatgttgagca 103  Q
    |||||||||||| ||  | ||||| |||||||||||||||||| ||||||||||| | |||| || ||||||       ||||||||||||| |||||||    
T  3213641 gtcatgttaactcgtgtctttagggcacatgttaaacattaatttcattccattaattgtaaaaaattattgaaaa---taatattaaatattttgagca 3213737  T
Q  104 ataaattaatataattttcaatacatgatttctattagtagaatttttaacatataccttaagagcacaagtta 177  Q
    ||||||||  ||||||||| ||| || |||||||||| ||||||  ||||||||| ||||||||||||||||||    
T  3213738 ataaattagcataattttccatatataatttctattaatagaatgcttaacatatgccttaagagcacaagtta 3213811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 26 - 156
Target Start/End: Original strand, 32785782 - 32785913
Alignment:
Q  26 ggacacatgttaaacattaatgtcattccattattggtaagaatttattgnnnnnnnt-aatattaaatatgttgagcaataaattaatataattttcaa 124  Q
    ||||||||||||| |||| |||| |||| |||| ||||||||||||||||       | |||||||||||| |||||||||||||||| ||||||| |||    
T  32785782 ggacacatgttaagcattgatgtaattctattaatggtaagaatttattgaaagaaatcaatattaaatattttgagcaataaattaaaataatttccaa 32785881  T
Q  125 tacatgatttctattagtagaatttttaacat 156  Q
    ||||| |||||||||||| ||||| |||||||    
T  32785882 tacataatttctattagtggaattcttaacat 32785913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 33972583 - 33972739
Alignment:
Q  1 agggtcatgttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaatttattgnnnnnnntaatattaaatatgttga 100  Q
    |||||||||||||||||| | |||||  |||||||||| ||||||| ||||||||||| ||||||||||| ||||        | ||||||| || ||||    
T  33972583 agggtcatgttaacttgtgctcttagagcacatgttaagcattaatttcattccattaatggtaagaattaattgaaaaataaattattaaacattttga 33972682  T
Q  101 gcaataaattaatataattttcaatacatgattt-ctattagtagaatttttaacat 156  Q
     ||||||||||| || |||| |||||||| |||| |||||||||||||| |||||||    
T  33972683 acaataaattaacatcatttccaatacataatttcctattagtagaattcttaacat 33972739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 83 - 183
Target Start/End: Complemental strand, 17506519 - 17506419
Alignment:
Q  83 taatattaaatatgttgagcaataaattaatataattttcaatacatgatttctattagtagaatttttaacatataccttaagagcacaagttagcatt 182  Q
    ||||||| ||||| || || | |||||||| | |||||  ||||||| |||||||||||| ||||||||||||||| |  ||||||||||||||||||||    
T  17506519 taatattcaatatcttaagtattaaattaacacaatttcaaatacataatttctattagtggaatttttaacatatgctctaagagcacaagttagcatt 17506420  T
Q  183 t 183  Q
    |    
T  17506419 t 17506419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 12141684 - 12141755
Alignment:
Q  1 agggtcatgttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaattta 72  Q
    |||||||||||||||||| |  ||| |||||||||||||||||||| ||||||||||| || ||| ||||||    
T  12141684 agggtcatgttaacttgtgcatttaagacacatgttaaacattaatttcattccattaatgataaaaattta 12141755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 154370 - 154326
Alignment:
Q  1 agggtcatgttaacttgtacccttaggacacatgttaaacattaa 45  Q
    |||||||||||||||||| |||||| |||||||||||||||||||    
T  154370 agggtcatgttaacttgtgcccttaagacacatgttaaacattaa 154326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 8853792 - 8853724
Alignment:
Q  7 atgttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaatttattg 75  Q
    ||||||| ||||  ||||||| || ||||||| ||||||||||||| ||||| ||||||||||||||||    
T  8853792 atgttaatttgtggccttagggcatatgttaatcattaatgtcatttcattaatggtaagaatttattg 8853724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 11109060 - 11109097
Alignment:
Q  4 gtcatgttaacttgtacccttaggacacatgttaaaca 41  Q
    ||||||||||||||| |||| |||||||||||||||||    
T  11109060 gtcatgttaacttgtgccctaaggacacatgttaaaca 11109097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 7269668 - 7269712
Alignment:
Q  1 agggtcatgttaacttgtacccttaggacacatgttaaacattaa 45  Q
    |||||||| ||||||||| || ||||| |||||||||||||||||    
T  7269668 agggtcatattaacttgtgcctttagggcacatgttaaacattaa 7269712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 260286 - 260472
Alignment:
Q  1 agggtcatgttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaatttattg-nnnnnnntaatattaaatatgttg 99  Q
    |||||||||||||||||| ||||||||   |||||||| ||||||||||||||||||| ||||||||||||||||        ||| |||||| || |||    
T  260286 agggtcatgttaacttgtgcccttagggtccatgttaagcattaatgtcattccattaatggtaagaatttattgaaaaaaattaacattaaacattttg 260385  T
Q  100 agcaataaattaatataattttcaatacatgatttctattagtagaatttttaacatataccttaagagcacaagttagcatttccc 186  Q
    | ||||||||||| | || ||||||||||| |||||||||||| | ||| |||| || | || | || |||||||||| ||||||||    
T  260386 aacaataaattaacacaaatttcaatacataatttctattagtggtattcttaatatgtgcccttagggcacaagttatcatttccc 260472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 2e-24; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 10044141 - 10044282
Alignment:
Q  1 agggtcatgttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaatttattg--nnnnnnntaatattaaatatgtt 98  Q
    ||||||||||||||||||  |||||||| |||||||||||| |||| ||||| ||||| ||||||||||||||||         |||||||||| || ||    
T  10044141 agggtcatgttaacttgtgtccttaggatacatgttaaacactaatttcatttcattaatggtaagaatttattgaaaaataattaatattaaacatttt 10044240  T
Q  99 gagcaataaattaatataattttcaatacatgatttctatta 140  Q
    |||||||||||||| | || ||||||||||| ||||||||||    
T  10044241 gagcaataaattaacacaactttcaatacataatttctatta 10044282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 30 - 189
Target Start/End: Complemental strand, 21369269 - 21369107
Alignment:
Q  30 acatgttaaacattaatgtcattccattattggtaagaatttattgnnnnnnn--taatattaaatatgttgagc-aataaattaatataattttcaata 126  Q
    ||||||||||||||||| ||||||||||| ||||||||||||| ||         ||||||||||||| || ||| |||||||||| | |||||||||||    
T  21369269 acatgttaaacattaatttcattccattaatggtaagaatttaatgaaaaaaaattaatattaaatattttaagctaataaattaacacaattttcaata 21369170  T
Q  127 catgatttctattagtagaatttttaacatataccttaagagcacaagttagcatttcccata 189  Q
    |||||| |||||||||  |||  |||||||   ||||||| |||||||||| |||||||||||    
T  21369169 catgatatctattagtgaaatccttaacatgcgccttaagggcacaagttaacatttcccata 21369107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 29 - 191
Target Start/End: Complemental strand, 17566846 - 17566682
Alignment:
Q  29 cacatgttaaacattaatgtcattccattattggtaagaattta-ttgnnnnnnnt-aatattaaatatgttgagcaataaattaatataattttcaata 126  Q
    |||||||||||||||||| |||||| |||| || |||||||||| |||       | ||||||||| ||||||| |||||||| || | || ||||||||    
T  17566846 cacatgttaaacattaatttcattctattaatgataagaatttaattgaaaaaaattaatattaaacatgttgaacaataaataaacacaaatttcaata 17566747  T
Q  127 catgatttctattagtagaatttttaacatataccttaagagcacaagttagcatttcccatatt 191  Q
    ||  |||||||||||||||||| |||| || | |  |||| |||||||||| |||||||| ||||    
T  17566746 caaaatttctattagtagaattcttaatatgtgcactaagggcacaagttatcatttcccttatt 17566682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 28024138 - 28024236
Alignment:
Q  30 acatgttaaacattaatgtcattccattattggtaagaatttattg--nnnnnnntaatattaaatatgttgagcaataaattaatataattttcaata 126  Q
    |||||||||||||||||||||||| |||| | ||||||||||||||         ||||||||||||| ||||||| |||||||| |||||| ||||||    
T  28024138 acatgttaaacattaatgtcattctattaattgtaagaatttattgaaaaagagttaatattaaatattttgagcattaaattaacataattatcaata 28024236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 185
Target Start/End: Original strand, 42655897 - 42656080
Alignment:
Q  3 ggtcatgttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaatttattg-nnnnnnntaatattaaatatgttgag 101  Q
    |||||||||||||||| |||||| |||||||||||||||||||  || |  || || ||||||| ||| ||||        |||||||| || | |||||    
T  42655897 ggtcatgttaacttgtgcccttaagacacatgttaaacattaaattcttgacactaatggtaagtattaattgaaaaaaattaatattagattttttgag 42655996  T
Q  102 caataaattaatataattttcaatacatgatttctattagtagaatttttaacatataccttaagagcacaagttagcatttcc 185  Q
    ||||||||||||  ||||||| | |||| ||||||| ||||| |||  ||||||| || | |||| ||| |||||| |||||||    
T  42655997 caataaattaatgcaattttcgagacataatttctactagtaaaatccttaacatgtatcataagggcataagttaacatttcc 42656080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 49 - 189
Target Start/End: Complemental strand, 32317702 - 32317560
Alignment:
Q  49 cattccattattggtaagaatttattgnnnnnnnt-aatattaaatatgtt-gagcaataaattaatataattttcaatacatgatttctattagtagaa 146  Q
    |||||||||| ||||||||||||||||       | |||||| ||||| || || ||||||||||| | |||||| |||| || |||||||||| |  ||    
T  32317702 cattccattaatggtaagaatttattgaaaacaattaatatttaatatttttgaacaataaattaacacaatttttaatatataatttctattattgaaa 32317603  T
Q  147 tttttaacatataccttaagagcacaagttagcatttcccata 189  Q
    || |||||||||||||||||| || || |||||||||| ||||    
T  32317602 ttattaacatataccttaagaacataaattagcatttcgcata 32317560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 156
Target Start/End: Complemental strand, 2903436 - 2903377
Alignment:
Q  97 ttgagcaataaattaatataattttcaatacatgatttctattagtagaatttttaacat 156  Q
    |||||||||||||||| ||||||| | | |||| |||||||||||||||||| |||||||    
T  2903436 ttgagcaataaattaacataatttccgagacataatttctattagtagaattcttaacat 2903377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 45
Target Start/End: Original strand, 25037236 - 25037279
Alignment:
Q  2 gggtcatgttaacttgtacccttaggacacatgttaaacattaa 45  Q
    ||||||||||||||||| | ||||||||||||||||||||||||    
T  25037236 gggtcatgttaacttgtgctcttaggacacatgttaaacattaa 25037279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 25837504 - 25837433
Alignment:
Q  1 agggtcatgttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaattta 72  Q
    |||||| ||||||||| | |||||| |||||||||||| ||||||| |||||  |||| |||||||||||||    
T  25837504 agggtcttgttaacttatgcccttaagacacatgttaagcattaatttcattatattaatggtaagaattta 25837433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 103 - 186
Target Start/End: Original strand, 5402789 - 5402872
Alignment:
Q  103 aataaattaatataattttcaatacatgatttctattagtagaatttttaacatataccttaagagcacaagttagcatttccc 186  Q
    |||||||||| | ||||| |||||||  ||| |||||| | ||||||||||||| | ||||||| | |||||||| ||||||||    
T  5402789 aataaattaacacaatttccaatacacaattactattaatggaatttttaacatgtgccttaaggggacaagttaacatttccc 5402872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 185
Target Start/End: Complemental strand, 10333882 - 10333780
Alignment:
Q  83 taatattaaatatgttgagcaataaattaatataattttcaatacatgatttctattagtagaatttttaacatataccttaagagcacaagttagcatt 182  Q
    ||||||||||| | |||||||||||||||||  | ||||||| |||| |||| ||||||| ||||  |||| || |  |||||| |||||| ||| ||||    
T  10333882 taatattaaattttttgagcaataaattaatgcatttttcaagacataatttttattagttgaatccttaatatgtgtcttaagggcacaaattaacatt 10333783  T
Q  183 tcc 185  Q
    |||    
T  10333782 tcc 10333780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 16285912 - 16285969
Alignment:
Q  83 taatattaaatatgttgagcaataaattaatataattttcaatacatgatttctatta 140  Q
    |||||||||||||  | ||||||||||||| | |||||||||| ||| ||||||||||    
T  16285912 taatattaaatattcttagcaataaattaacacaattttcaatgcataatttctatta 16285969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 5511 - 5551
Alignment:
Q  3 ggtcatgttaacttgtacccttaggacacatgttaaacatt 43  Q
    ||||||||||||||||  |||||| ||||||||||||||||    
T  5511 ggtcatgttaacttgtgtccttagaacacatgttaaacatt 5551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 29429776 - 29429740
Alignment:
Q  2 gggtcatgttaacttgtacccttaggacacatgttaa 38  Q
    ||||||||||||||||| |||||||| ||||||||||    
T  29429776 gggtcatgttaacttgtgcccttagggcacatgttaa 29429740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 187
Target Start/End: Complemental strand, 32135907 - 32135803
Alignment:
Q  83 taatattaaatatgttgagcaataaattaatataattttcaatacatgatttctattagtagaatttttaacatataccttaagagcacaagttagcatt 182  Q
    |||||||| || | |||||||||||||||    ||||| | | |||| |||||||||||| ||||  ||||||| | || |||||||| |||||| ||||    
T  32135907 taatattagattttttgagcaataaattatcgcaatttacgagacataatttctattagtggaatccttaacatgtgccctaagagcagaagttaacatt 32135808  T
Q  183 tccca 187  Q
    |||||    
T  32135807 tccca 32135803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 4e-22; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 32227620 - 32227432
Alignment:
Q  1 agggtcatgttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaatttattgnnnnnnn---taatattaaatatgt 97  Q
    |||||| |||||| |||| |  ||||| |||||||||| ||||||| ||||||||||| |||||| |||||| ||          |||||||||| || |    
T  32227620 agggtcgtgttaatttgtgcttttagggcacatgttaagcattaatttcattccattaatggtaataatttaatgaaaaaaaaattaatattaaacattt 32227521  T
Q  98 tgagcaataaattaatataattttcaatacatgatttctattagtagaatttttaacatataccttaagagcacaagttagcatttccc 186  Q
    | | |||||||| || | |||||||||||||| |||||||||||||||||| ||||||||| || |||| ||||| |||| ||||||||    
T  32227520 taaacaataaatgaacacaattttcaatacataatttctattagtagaattcttaacatatgccctaagggcacatgttaacatttccc 32227432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 153
Target Start/End: Complemental strand, 41766463 - 41766314
Alignment:
Q  5 tcatgttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaatttattgnnnnnnnt-aatattaaatatgttgagca 103  Q
    |||||||||||||| |||| | |||||||||||||||||||| |||||  |||| |||||| ||||  |||       | ||||||||| || |||||||    
T  41766463 tcatgttaacttgtgccctcatgacacatgttaaacattaatttcatttaattaatggtaaaaattagttgaaaaaaattaatattaaacattttgagca 41766364  T
Q  104 ataaattaatataattttcaatacatgatttctattagtagaatttttaa 153  Q
    ||||| ||| | |||||||||||||| |||| ||||||||||||||||||    
T  41766363 ataaaataacacaattttcaatacataatttatattagtagaatttttaa 41766314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 40534402 - 40534211
Alignment:
Q  1 agggtcatgttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaatttattgnnnnnnntaatattaaatatgttga 100  Q
    ||||| |||||||||||| | |||||| |||||||||||||||||| |||| |||||| | ||||||||||| ||       || ||||||| |  ||||    
T  40534402 agggttatgttaacttgtgctcttagggcacatgttaaacattaatttcataccattaatagtaagaatttaatggaaaaattagtattaaacaacttga 40534303  T
Q  101 gcaataaattaatataattttcaatacatgatttctattagtagaatttttaacatataccttaagagcacaagttagcatttcccatattt 192  Q
    | |||||||||| | |||||||||||||  ||| | |||||| ||||| ||||| | |||| |||  | |||||||| |||||||| |||||    
T  40534302 gtaataaattaacacaattttcaatacacaattacgattagtggaattcttaacttgtaccctaaatgtacaagttaacatttcccttattt 40534211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 185
Target Start/End: Complemental strand, 14776451 - 14776270
Alignment:
Q  5 tcatgttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaattt-attgnnnnnnntaatattaaatatgttgagca 103  Q
    ||||||||||||||  |||||||||||||||||||||||||| ||||| ||||| |||||||||||| ||         |||||||||| |  ||||| |    
T  14776451 tcatgttaacttgtgtccttaggacacatgttaaacattaatttcatttcattaatggtaagaatttgatgaaaaaaattaatattaaacaatttgagta 14776352  T
Q  104 ataaattaatataattttcaatacatgatttctattagtagaatttttaacatataccttaagagcacaagttagcatttcc 185  Q
    ||||||||| | |||||||||||||| ||| ||| || || |||| ||||||| | |  |||  |||||||||| |||||||    
T  14776351 ataaattaacacaattttcaatacataattactaatattaaaattcttaacatgtgctctaatggcacaagttaacatttcc 14776270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 184
Target Start/End: Complemental strand, 32656344 - 32656243
Alignment:
Q  83 taatattaaatatgttgagcaataaattaatataattttcaatacatgatttctattagtagaatttttaacatataccttaagagcacaagttagcatt 182  Q
    ||||||||||||| || | ||||||||||| | || ||||||||||||||||||||||||  |||| ||||||| | || |||| |||||||||| ||||    
T  32656344 taatattaaatattttaatcaataaattaacacaagtttcaatacatgatttctattagtgaaattcttaacatgtgccctaagggcacaagttaacatt 32656245  T
Q  183 tc 184  Q
    ||    
T  32656244 tc 32656243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 75
Target Start/End: Complemental strand, 10500488 - 10500417
Alignment:
Q  4 gtcatgttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaatttattg 75  Q
    ||||||||||||||| || ||| | |||||||||| ||||||||| ||||||||| ||||||||||||||||    
T  10500488 gtcatgttaacttgtgccgttaaggcacatgttaagcattaatgtaattccattaatggtaagaatttattg 10500417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 97 - 183
Target Start/End: Original strand, 33830309 - 33830395
Alignment:
Q  97 ttgagcaataaattaatataattttcaatacatgatttctattagtagaatttttaacatataccttaagagcacaagttagcattt 183  Q
    |||||||||||||||| | ||||| |||||||| ||||||||||||| |||| |||||||||||  |||| ||| |||||| |||||    
T  33830309 ttgagcaataaattaacacaatttccaatacataatttctattagtaaaattcttaacatatactataagggcataagttaacattt 33830395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 41465382 - 41465452
Alignment:
Q  5 tcatgttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaatttattg 75  Q
    ||||||||||||||  ||||||| || ||||||| |||||||||||| |||| | ||||||||||||||||    
T  41465382 tcatgttaacttgtgtccttagggcagatgttaatcattaatgtcataccatcaatggtaagaatttattg 41465452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 156
Target Start/End: Complemental strand, 9374128 - 9374055
Alignment:
Q  83 taatattaaatatgttgagcaataaattaatataattttcaatacatgatttctattagtagaatttttaacat 156  Q
    |||||||||| || |||||||||||||||| | ||||| |||||||| |||||| ||| |  ||||||||||||    
T  9374128 taatattaaacattttgagcaataaattaaaacaatttccaatacataatttctgttaatgaaatttttaacat 9374055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 160
Target Start/End: Original strand, 30326107 - 30326184
Alignment:
Q  83 taatattaaatatgttgagcaataaattaatataattttcaatacatgatttctattagtagaatttttaacatatac 160  Q
    |||||||||| || ||||| |||||||||| | |||||||||||||| |||||| ||| |  |||| |||||||||||    
T  30326107 taatattaaacattttgagtaataaattaacacaattttcaatacataatttctcttaatgaaattcttaacatatac 30326184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 187
Target Start/End: Complemental strand, 43305523 - 43305458
Alignment:
Q  122 caatacatgatttctattagtagaatttttaacatataccttaagagcacaagttagcatttccca 187  Q
    |||||||| |||||||||||||||||| ||||||| | || ||||  ||||||||| |||||||||    
T  43305523 caatacataatttctattagtagaattattaacatgtgccctaaggacacaagttatcatttccca 43305458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 192
Target Start/End: Original strand, 35327744 - 35327935
Alignment:
Q  2 gggtcatgttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaatttattg--nnnnnnntaatattaaatatgttg 99  Q
    ||||||||||||| ||| |||| |||  ||||||||||||||||| ||||| ||||| |  |||||||||| ||         || ||||||| |  |||    
T  35327744 gggtcatgttaacatgtgccctcagggtacatgttaaacattaatttcatttcattaatattaagaatttaatggaaaaaaattagtattaaacaacttg 35327843  T
Q  100 agcaataaattaatataattttcaatacatgatttctattagtagaatttttaacatataccttaagagcacaagttagcatttcccatattt 192  Q
    || |||||||||| | | |||||||||||  ||| |||||||| ||||| || |||| |  |||||| |||||||||| |||||||| |||||    
T  35327844 agtaataaattaacacagttttcaatacacaattactattagtggaattctt-acatgtgtcttaagggcacaagttaacatttcccttattt 35327935  T

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Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 156
Target Start/End: Complemental strand, 45075736 - 45075680
Alignment:
Q  100 agcaataaattaatataattttcaatacatgatttctattagtagaatttttaacat 156  Q
    ||||||||||||| | |||||||||||||| |||| |||||||  ||||||||||||    
T  45075736 agcaataaattaacacaattttcaatacataatttatattagtgaaatttttaacat 45075680  T

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Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 27414046 - 27414117
Alignment:
Q  4 gtcatgttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaatttattg 75  Q
    ||||||||||||||| |||||||| |||||||||| ||||||  || | |||||| ||||||| ||| ||||    
T  27414046 gtcatgttaacttgtgcccttagggcacatgttaagcattaaattcttgccattaatggtaagtattaattg 27414117  T

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Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 156
Target Start/End: Complemental strand, 12497371 - 12497298
Alignment:
Q  83 taatattaaatatgttgagcaataaattaatataattttcaatacatgatttctattagtagaatttttaacat 156  Q
    |||||||||| || || ||||||||||||| | ||||| | | ||||||||||||||||  ||||| |||||||    
T  12497371 taatattaaacattttaagcaataaattaacacaatttccgacacatgatttctattagcggaattcttaacat 12497298  T

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Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 11941671 - 11941627
Alignment:
Q  1 agggtcatgttaacttgtacccttaggacacatgttaaacattaa 45  Q
    ||||||||||||| |||| || |||||||||||||||| ||||||    
T  11941671 agggtcatgttaaattgtgcctttaggacacatgttaagcattaa 11941627  T

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Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 58
Target Start/End: Original strand, 33830213 - 33830268
Alignment:
Q  3 ggtcatgttaacttgtacccttag-gacacatgttaaacattaatgtcattccatta 58  Q
    |||||||||||||||| || |||| ||| |||||||| |||||||||||||||||||    
T  33830213 ggtcatgttaacttgtgcctttagagac-catgttaagcattaatgtcattccatta 33830268  T

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Target: scaffold0154 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 83 - 186
Target Start/End: Original strand, 36407 - 36510
Alignment:
Q  83 taatattaaatatgttgagcaataaattaatataattttcaatacatgatttctattagtagaatttttaacatataccttaagagcacaagttagcatt 182  Q
    ||||||||||||| ||||| |||||||||| | ||||| |||||||| |||||||||||| ||||| ||||||| | | ||||| |||||||||| ||||    
T  36407 taatattaaatattttgagaaataaattaacacaatttccaatacataatttctattagtggaattcttaacatgtgctttaagggcacaagttaacatt 36506  T
Q  183 tccc 186  Q
    ||||    
T  36507 tccc 36510  T

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Target: scaffold0524 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0524
Description:

Target: scaffold0524; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 1398 - 1552
Alignment:
Q  1 agggtcatgttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaatttattg--nnnnnnntaatattaaatatgtt 98  Q
    |||||| |||||||||||||||||||  || ||| ||| ||||||||||||| ||||| | ||||||||||||||         |||||| ||| || ||    
T  1398 agggtcctgttaacttgtacccttagagcatatgataagcattaatgtcatttcattaatagtaagaatttattgaaaacaaattaatatcaaacatttt 1497  T
Q  99 gagcaataaattaatataattttcaatacatgatttctattagtagaatttttaa 153  Q
    |||||||||||||| | ||||| | |||||| |||||||||| | ||||| ||||    
T  1498 gagcaataaattaacacaatttccgatacataatttctattaatggaattcttaa 1552  T

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Target: scaffold0129 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 37708 - 37553
Alignment:
Q  1 agggtcatgttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaatttattg--nnnnnnntaatattaaatatgtt 98  Q
    |||||||||||||||||| ||||||  ||| ||||||||||||||| ||||| ||||| ||| || |||||| ||         |||||||||| || ||    
T  37708 agggtcatgttaacttgtgccctta--acaaatgttaaacattaatttcatttcattaatggaaataatttaatgaaaaaaaattaatattaaacatttt 37611  T
Q  99 gagcaataaattaatataattttcaatacatgatttctattagtagaatttttaacat 156  Q
     ||||||||||||| | |||||  ||||||||| ||||||||||  |||| |||||||    
T  37610 aagcaataaattaacacaatttctaatacatgacttctattagtgaaattcttaacat 37553  T

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Target: scaffold1157 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold1157
Description:

Target: scaffold1157; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 83 - 187
Target Start/End: Original strand, 1940 - 2044
Alignment:
Q  83 taatattaaatatgttgagcaataaattaatataattttcaatacatgatttctattagtagaatttttaacatataccttaagagcacaagttagcatt 182  Q
    |||||||| || | || ||||||||||||| | ||||||| | |||| |||||||||||| ||||  ||||||| | || |||| |||||||||| ||||    
T  1940 taatattagattttttaagcaataaattaacacaattttcgagacataatttctattagtggaatcattaacatgtgccctaagggcacaagttaacatt 2039  T
Q  183 tccca 187  Q
    |||||    
T  2040 tccca 2044  T

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Target: scaffold0061 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 9072 - 9139
Alignment:
Q  5 tcatgttaacttgtacccttaggacacatgttaaacattaatgtcattccattattggtaagaattta 72  Q
    |||||||||||||| ||||||||||||||||||| ||||||| | |||||| || ||| || ||||||    
T  9072 tcatgttaacttgttcccttaggacacatgttaagcattaattttattccactaatggcaataattta 9139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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