View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16830_high_1 (Length: 760)

Name: NF16830_high_1
Description: NF16830
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16830_high_1
NF16830_high_1
[»] chr6 (26 HSPs)
chr6 (18-369)||(14529303-14529654)
chr6 (18-173)||(14533848-14534003)
chr6 (451-624)||(14529049-14529222)
chr6 (654-752)||(14533009-14533107)
chr6 (654-752)||(14528283-14528381)
chr6 (18-131)||(14523695-14523808)
chr6 (176-244)||(14533405-14533473)
chr6 (451-549)||(21381453-21381551)
chr6 (454-552)||(12158974-12159072)
chr6 (454-548)||(12650088-12650181)
chr6 (451-531)||(7793261-7793341)
chr6 (452-528)||(17186750-17186826)
chr6 (246-306)||(14523572-14523632)
chr6 (576-624)||(21955533-21955581)
chr6 (18-97)||(14516461-14516540)
chr6 (455-531)||(13246660-13246736)
chr6 (451-523)||(30792966-30793038)
chr6 (477-552)||(21955607-21955681)
chr6 (477-531)||(15584301-15584355)
chr6 (576-614)||(17186875-17186913)
chr6 (580-617)||(7793174-7793211)
chr6 (575-624)||(13192942-13192991)
chr6 (468-552)||(26289201-26289284)
chr6 (576-624)||(30792866-30792914)
chr6 (579-614)||(12650210-12650245)
chr6 (451-509)||(20805803-20805861)
[»] chr3 (36 HSPs)
chr3 (451-624)||(30846952-30847124)
chr3 (451-624)||(18430900-18431073)
chr3 (467-624)||(30738688-30738843)
chr3 (18-125)||(23347302-23347409)
chr3 (18-133)||(37329320-37329435)
chr3 (18-133)||(37340585-37340700)
chr3 (475-624)||(46552695-46552844)
chr3 (451-552)||(21224011-21224111)
chr3 (453-552)||(39993142-39993240)
chr3 (451-567)||(19680693-19680806)
chr3 (451-612)||(36735019-36735178)
chr3 (451-617)||(47257489-47257652)
chr3 (451-610)||(30433927-30434085)
chr3 (451-523)||(35924917-35924989)
chr3 (476-552)||(41118400-41118476)
chr3 (477-552)||(12113345-12113419)
chr3 (487-624)||(1362950-1363087)
chr3 (451-624)||(26504952-26505122)
chr3 (576-624)||(21224139-21224187)
chr3 (476-552)||(38751452-38751527)
chr3 (451-612)||(17578761-17578915)
chr3 (454-552)||(24475610-24475708)
chr3 (486-552)||(29251335-29251400)
chr3 (464-530)||(32814129-32814195)
chr3 (451-624)||(45406412-45406587)
chr3 (576-617)||(21696781-21696822)
chr3 (576-617)||(24475547-24475588)
chr3 (576-624)||(7719758-7719806)
chr3 (584-624)||(12113437-12113477)
chr3 (464-523)||(775669-775728)
chr3 (578-624)||(35924812-35924858)
chr3 (578-624)||(47117662-47117708)
chr3 (487-524)||(31681834-31681871)
chr3 (459-524)||(31901104-31901169)
chr3 (487-524)||(31916824-31916861)
chr3 (487-524)||(31950502-31950539)
[»] chr8 (27 HSPs)
chr8 (478-622)||(44400451-44400594)
chr8 (451-624)||(21511558-21511730)
chr8 (451-624)||(11660569-11660741)
chr8 (451-624)||(11669738-11669910)
chr8 (464-552)||(31801251-31801338)
chr8 (451-552)||(33561965-33562065)
chr8 (451-528)||(2179206-2179283)
chr8 (451-552)||(26624022-26624123)
chr8 (451-523)||(12177851-12177923)
chr8 (451-523)||(12422279-12422351)
chr8 (452-552)||(17934262-17934362)
chr8 (451-614)||(41636414-41636577)
chr8 (455-624)||(32821616-32821781)
chr8 (451-508)||(25328686-25328743)
chr8 (451-552)||(45364219-45364318)
chr8 (453-624)||(32178313-32178479)
chr8 (487-624)||(41844889-41845025)
chr8 (451-614)||(775291-775451)
chr8 (451-614)||(780945-781105)
chr8 (451-552)||(5967341-5967440)
chr8 (578-624)||(17934387-17934433)
chr8 (453-523)||(25735949-25736019)
chr8 (576-617)||(31801201-31801242)
chr8 (487-552)||(33937117-33937181)
chr8 (478-530)||(13415910-13415962)
chr8 (464-529)||(788696-788761)
chr8 (455-528)||(5335642-5335715)
[»] chr7 (26 HSPs)
chr7 (468-617)||(13953710-13953857)
chr7 (451-624)||(37597280-37597450)
chr7 (451-610)||(13954315-13954473)
chr7 (454-552)||(28606124-28606221)
chr7 (451-624)||(28606648-28606818)
chr7 (451-522)||(45234599-45234670)
chr7 (451-552)||(12407990-12408089)
chr7 (451-531)||(12392125-12392205)
chr7 (451-624)||(17221964-17222136)
chr7 (476-552)||(28919035-28919111)
chr7 (464-552)||(37668581-37668669)
chr7 (459-522)||(9157789-9157852)
chr7 (476-617)||(25318015-25318155)
chr7 (478-613)||(43094624-43094756)
chr7 (577-624)||(36802919-36802966)
chr7 (464-514)||(8319947-8319997)
chr7 (577-624)||(9157676-9157723)
chr7 (577-624)||(45234499-45234546)
chr7 (502-548)||(2355197-2355243)
chr7 (576-622)||(21698787-21698833)
chr7 (454-500)||(42834702-42834748)
chr7 (576-617)||(28918970-28919011)
chr7 (577-617)||(8320037-8320077)
chr7 (577-623)||(28336939-28336985)
chr7 (477-522)||(5277737-5277782)
chr7 (577-610)||(48268811-48268844)
[»] chr2 (23 HSPs)
chr2 (451-624)||(39952126-39952295)
chr2 (451-624)||(41670079-41670252)
chr2 (454-624)||(41399068-41399239)
chr2 (451-531)||(32493538-32493618)
chr2 (455-530)||(3436405-3436480)
chr2 (454-552)||(6201388-6201485)
chr2 (454-531)||(14660677-14660754)
chr2 (455-552)||(42461024-42461120)
chr2 (451-531)||(7634756-7634835)
chr2 (476-624)||(21646995-21647137)
chr2 (578-624)||(33891762-33891808)
chr2 (451-552)||(16751304-16751405)
chr2 (488-613)||(5997897-5998021)
chr2 (487-531)||(9621044-9621088)
chr2 (451-523)||(27330569-27330641)
chr2 (577-624)||(21202485-21202532)
chr2 (578-624)||(21200170-21200216)
chr2 (578-624)||(32493663-32493709)
chr2 (584-624)||(7634665-7634705)
chr2 (576-624)||(27330471-27330519)
chr2 (578-624)||(3436512-3436558)
chr2 (584-618)||(16751251-16751285)
chr2 (486-531)||(28176365-28176410)
[»] chr5 (24 HSPs)
chr5 (451-614)||(394290-394451)
chr5 (451-624)||(5841318-5841493)
chr5 (452-624)||(7861300-7861469)
chr5 (454-624)||(42522125-42522293)
chr5 (451-548)||(10378801-10378898)
chr5 (451-552)||(15834845-15834945)
chr5 (454-624)||(865606-865772)
chr5 (476-624)||(36080597-36080743)
chr5 (451-624)||(36977411-36977583)
chr5 (454-624)||(9771758-9771925)
chr5 (454-531)||(13146158-13146235)
chr5 (577-617)||(2068424-2068464)
chr5 (459-523)||(32270430-32270494)
chr5 (577-624)||(6812692-6812739)
chr5 (451-624)||(35286012-35286185)
chr5 (453-531)||(25825070-25825148)
chr5 (578-624)||(32270343-32270389)
chr5 (451-531)||(12220208-12220286)
chr5 (464-529)||(43583509-43583574)
chr5 (576-624)||(15936946-15936994)
chr5 (576-624)||(25824979-25825027)
chr5 (578-624)||(10192714-10192760)
chr5 (578-624)||(26244398-26244444)
chr5 (576-609)||(10378745-10378778)
[»] chr4 (19 HSPs)
chr4 (451-624)||(50679823-50679994)
chr4 (453-531)||(32156536-32156614)
chr4 (455-552)||(9686541-9686638)
chr4 (451-529)||(25142258-25142336)
chr4 (451-624)||(42746648-42746818)
chr4 (451-531)||(24970043-24970123)
chr4 (477-548)||(51717705-51717776)
chr4 (464-526)||(24234878-24234940)
chr4 (451-552)||(35321535-35321634)
chr4 (452-530)||(19300205-19300283)
chr4 (576-622)||(49491935-49491981)
chr4 (576-624)||(16304418-16304466)
chr4 (467-531)||(49491827-49491891)
chr4 (577-624)||(49402455-49402502)
chr4 (576-617)||(16476387-16476428)
chr4 (451-523)||(180479-180551)
chr4 (577-624)||(25142186-25142233)
chr4 (505-552)||(37874586-37874633)
chr4 (579-624)||(51717632-51717677)
[»] chr1 (22 HSPs)
chr1 (451-565)||(12880296-12880410)
chr1 (451-552)||(12628710-12628811)
chr1 (451-617)||(25891884-25892054)
chr1 (464-531)||(46284126-46284193)
chr1 (454-552)||(29152797-29152894)
chr1 (451-544)||(6492375-6492467)
chr1 (451-531)||(15802063-15802143)
chr1 (451-531)||(51161801-51161881)
chr1 (451-548)||(10891454-10891552)
chr1 (451-552)||(36700069-36700170)
chr1 (451-552)||(36716173-36716274)
chr1 (451-523)||(41811999-41812071)
chr1 (476-531)||(33015289-33015344)
chr1 (477-531)||(52042705-52042759)
chr1 (451-552)||(13573217-13573317)
chr1 (576-624)||(6492501-6492549)
chr1 (451-515)||(11830742-11830806)
chr1 (576-624)||(23027016-23027064)
chr1 (576-624)||(41812121-41812169)
chr1 (576-624)||(43413461-43413509)
chr1 (577-620)||(34898875-34898918)
chr1 (576-614)||(10891399-10891437)
[»] scaffold0027 (1 HSPs)
scaffold0027 (451-624)||(116659-116831)
[»] scaffold0022 (1 HSPs)
scaffold0022 (37-122)||(162396-162481)
[»] scaffold1505 (1 HSPs)
scaffold1505 (451-523)||(865-937)
[»] scaffold0024 (1 HSPs)
scaffold0024 (475-552)||(42204-42280)
[»] scaffold0006 (1 HSPs)
scaffold0006 (476-562)||(160948-161033)
[»] scaffold0001 (1 HSPs)
scaffold0001 (451-500)||(183771-183820)


Alignment Details
Target: chr6 (Bit Score: 312; Significance: 1e-175; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 312; E-Value: 1e-175
Query Start/End: Original strand, 18 - 369
Target Start/End: Complemental strand, 14529654 - 14529303
Alignment:
Q  18 aattcaagatagcgagtgataagagggatttgtttaaagaatttgcagatcatcaagtgcgactgcacaagaagcttgcatttctggagggaagtgtatc 117  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14529654 aattcaagatagcgagtgataagagggatttatttacagaatttgcagatcatcaagtgcgactgcacaagaagcttgcatttctggagggaagtgtatc 14529555  T
Q  118 tgaaatctgaaactagttctttcaatgagtttgtttaatagttatagactggtaaaactaaagaagtagattctaatttacctttgataagaatccatgt 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14529554 tgaaatctgaaactagttctttcaatgagtttgtttaatagttatagactggtaaaactaaagaagtagattctaatttacctttgataagaatccatgt 14529455  T
Q  218 attctctttcaatcataactattg--tttaatcttaagcatgcgttgaaactgaaagcagaccaatgtaatgagttttttataaacatgttgttggtgta 315  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||   |||||||||||||||||||| |||||||||||||||||||    
T  14529454 attctctttcaatcataactattgtttttaatcttaagcatgcgttgaaactgaaag--taccaatgtaatgagttttttgtaaacatgttgttggtgta 14529357  T
Q  316 agacacctattactaatctgattttggataacttgactggtcggctttagagcc 369  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  14529356 agacacctatgactaatctgattttggataacttgactggtcggctttagagcc 14529303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 148; E-Value: 1e-77
Query Start/End: Original strand, 18 - 173
Target Start/End: Complemental strand, 14534003 - 14533848
Alignment:
Q  18 aattcaagatagcgagtgataagagggatttgtttaaagaatttgcagatcatcaagtgcgactgcacaagaagcttgcatttctggagggaagtgtatc 117  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14534003 aattcaagatagcgagtgataagagggatttgtttacagaatttgcagatcatcaagtgcgactgcacaagaagcttgcatttctggagggaagtgtatc 14533904  T
Q  118 tgaaatctgaaactagttctttcaatgagtttgtttaatagttatagactggtaaa 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  14533903 tgaaatctgaaactagttctttcaatgagtttgtttaatagttatagactagtaaa 14533848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 451 - 624
Target Start/End: Complemental strand, 14529222 - 14529049
Alignment:
Q  451 aaggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaat 550  Q
    |||||||| || |||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  14529222 aaggaaagtttttaatgaaaattttgtttgaaaagtttatcttaaaatgttattctaagtatttcatcattttattataattttctttggatactaaaat 14529123  T
Q  551 ttcgaacaaaattctctnnnnnnntgctatttcaaatagcttttcataaaattcatttttgaaagatttcattt 624  Q
    |||||| ||||||||||        ||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  14529122 ttcgaaaaaaattctctaaaaaaaagctatttcaaacagcttttcataaaaatcatttttgaaagatttcattt 14529049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 654 - 752
Target Start/End: Complemental strand, 14533107 - 14533009
Alignment:
Q  654 tctagaggcgtcatttcttcataagcttgcttgtgtgtctccggttgtggccatgtcgaaacggaacaacacttattattatcgtgcactacctttgct 752  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14533107 tctagaggcgtcatttcttcataagcttgcttgtgtgtctccggttgtggccatgtcgaaacggaacaacacttattattatcgtgcactacctttgct 14533009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 654 - 752
Target Start/End: Complemental strand, 14528381 - 14528283
Alignment:
Q  654 tctagaggcgtcatttcttcataagcttgcttgtgtgtctccggttgtggccatgtcgaaacggaacaacacttattattatcgtgcactacctttgct 752  Q
    |||||||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  14528381 tctagaggcgtcatttcttcattagattgcttgtgtgtctctggttgtggccatgtcgaaacggaacaacacttattattatcatgcactacctttgct 14528283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 18 - 131
Target Start/End: Complemental strand, 14523808 - 14523695
Alignment:
Q  18 aattcaagatagcgagtgataagagggatttgtttaaagaatttgcagatcatcaagtgcgactgcacaagaagcttgcatttctggagggaagtgtatc 117  Q
    ||||||||||||| ||||||||||||||||  || | ||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  14523808 aattcaagatagcaagtgataagagggattacttcacagaatttgcggatcatcaagtgcgactgcagaagaagcttgcatttctggaggaaagtgtatc 14523709  T
Q  118 tgaaatctgaaact 131  Q
    ||||||||||||||    
T  14523708 tgaaatctgaaact 14523695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 176 - 244
Target Start/End: Complemental strand, 14533473 - 14533405
Alignment:
Q  176 taaagaagtagattctaatttacctttgataagaatccatgtattctctttcaatcataactattgttt 244  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  14533473 taaagaagtagattctaatttacctttgataagaatccatgtattcactttcaatcataaccattgttt 14533405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 451 - 549
Target Start/End: Original strand, 21381453 - 21381551
Alignment:
Q  451 aaggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaa 549  Q
    |||||||||||| ||| |||| | ||||| |||| ||||||||||||||| ||||||||||||| |||||||  ||||||| || ||||||||||||||    
T  21381453 aaggaaagcttcaaataaaaaatctgtttaaatagtttatcttaaaatgtcattctaagtattttatcatttggttataattttttttggatactaaaa 21381551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 454 - 552
Target Start/End: Original strand, 12158974 - 12159072
Alignment:
Q  454 gaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaattt 552  Q
    |||| |||| |||||||| || |||||||||| |||||||||||||| ||| ||| || ||||||||||| ||||| | || |||||||||||||||||    
T  12158974 gaaaacttcaaatgaaaaattcgtttgaataacttatcttaaaatgtcattttaaatagttcatcattttgttatattcttttttggatactaaaattt 12159072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 454 - 548
Target Start/End: Original strand, 12650088 - 12650181
Alignment:
Q  454 gaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaa 548  Q
    ||||||||| |||||||| |  |||| |||| ||||||||||||||| ||| |||||||||||||||||| ||||||| || |||||||||||||    
T  12650088 gaaagcttcaaatgaaaaatacgtttaaatagtttatcttaaaatgtcattttaagtatttcatcattttgttataat-ttttttggatactaaa 12650181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 451 - 531
Target Start/End: Complemental strand, 7793341 - 7793261
Alignment:
Q  451 aaggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataat 531  Q
    |||||||| ||| |||||||| |  ||||||||| ||||||||||||||| | |||||||||||||||||||| |||||||    
T  7793341 aaggaaagtttcgaatgaaaaatccgtttgaatagtttatcttaaaatgtaagtctaagtatttcatcattttgttataat 7793261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 452 - 528
Target Start/End: Original strand, 17186750 - 17186826
Alignment:
Q  452 aggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattat 528  Q
    ||||||||||| |||||||| | ||||||||||  |||||||||||||| || ||||||||||||||||||| ||||    
T  17186750 aggaaagcttcaaatgaaaaatctgtttgaatagcttatcttaaaatgtcatgctaagtatttcatcattttgttat 17186826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 246 - 306
Target Start/End: Complemental strand, 14523632 - 14523572
Alignment:
Q  246 atcttaagcatgcgttgaaactgaaagcagaccaatgtaatgagttttttataaacatgtt 306  Q
    |||||||||||||||||||||||||||||   ||| |||||||||||||| ||||||||||    
T  14523632 atcttaagcatgcgttgaaactgaaagcattacaaggtaatgagttttttgtaaacatgtt 14523572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 576 - 624
Target Start/End: Complemental strand, 21955581 - 21955533
Alignment:
Q  576 gctatttcaaatagcttttcataaaattcatttttgaaagatttcattt 624  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  21955581 gctatttcaaatagcttttcataaaaatcatttttgaaagatgtcattt 21955533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 97
Target Start/End: Complemental strand, 14516540 - 14516461
Alignment:
Q  18 aattcaagatagcgagtgataagagggatttgtttaaagaatttgcagatcatcaagtgcgactgcacaagaagcttgca 97  Q
    ||||||||||||| |||| |||||| |||||||||| | ||||||| ||||| |||| |||  |||||||||||||||||    
T  14516540 aattcaagatagctagtgctaagagagatttgtttataaaatttgctgatcaacaagagcggttgcacaagaagcttgca 14516461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 455 - 531
Target Start/End: Original strand, 13246660 - 13246736
Alignment:
Q  455 aaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataat 531  Q
    |||| ||| |||||||| |||||||||| ||  ||||||||||||| ||| ||||||||||||| |||| |||||||    
T  13246660 aaagtttcaaatgaaaaatttgtttgaacaacatatcttaaaatgtcattttaagtatttcatctttttgttataat 13246736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 451 - 523
Target Start/End: Complemental strand, 30793038 - 30792966
Alignment:
Q  451 aaggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcatttt 523  Q
    |||||||| ||| |||||||| |  |||||||||| |||| ||||||||| |||||||||||||||| |||||    
T  30793038 aaggaaagtttcaaatgaaaaatccgtttgaataacttattttaaaatgtcattctaagtatttcattatttt 30792966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 477 - 552
Target Start/End: Complemental strand, 21955681 - 21955607
Alignment:
Q  477 tttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaattt 552  Q
    |||||||| ||||||||||||| | |||||||||||||||||||||  ||||||| || ||| |||| ||||||||    
T  21955681 tttgaatagtttatcttaaaatatcattctaagtatttcatcatttggttataat-tttttttgataataaaattt 21955607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 477 - 531
Target Start/End: Original strand, 15584301 - 15584355
Alignment:
Q  477 tttgaataatttatcttaaaatgttattctaagtatttcatcattttattataat 531  Q
    ||||||||  |||||||||||||| ||||||||||||||| |||||| |||||||    
T  15584301 tttgaatagcttatcttaaaatgtcattctaagtatttcagcattttgttataat 15584355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 576 - 614
Target Start/End: Original strand, 17186875 - 17186913
Alignment:
Q  576 gctatttcaaatagcttttcataaaattcatttttgaaa 614  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  17186875 gctatttcaaatagcttttcataaaaatcatttttgaaa 17186913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 580 - 617
Target Start/End: Complemental strand, 7793211 - 7793174
Alignment:
Q  580 tttcaaatagcttttcataaaattcatttttgaaagat 617  Q
    |||||||||||||||||||||| |||||||||||||||    
T  7793211 tttcaaatagcttttcataaaaatcatttttgaaagat 7793174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 575 - 624
Target Start/End: Original strand, 13192942 - 13192991
Alignment:
Q  575 tgctatttcaaatagcttttcataaaattcatttttgaaagatttcattt 624  Q
    |||||||| || || |||||||||||| ||||||||||||||||||||||    
T  13192942 tgctattttaattaacttttcataaaaatcatttttgaaagatttcattt 13192991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 468 - 552
Target Start/End: Complemental strand, 26289284 - 26289201
Alignment:
Q  468 aaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaattt 552  Q
    |||| ||||||||||||| |||||||||||||| ||| ||| |||||  ||||||| ||||||| || | |||||| ||||||||    
T  26289284 aaaaatttgtttgaataacttatcttaaaatgtcattttaaatattttttcattttgttataat-ttttatggataataaaattt 26289201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 576 - 624
Target Start/End: Complemental strand, 30792914 - 30792866
Alignment:
Q  576 gctatttcaaatagcttttcataaaattcatttttgaaagatttcattt 624  Q
    ||||||| |||||||||||||||||| |||||||||||| || ||||||    
T  30792914 gctattttaaatagcttttcataaaaatcatttttgaaaaatgtcattt 30792866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 579 - 614
Target Start/End: Original strand, 12650210 - 12650245
Alignment:
Q  579 atttcaaatagcttttcataaaattcatttttgaaa 614  Q
    ||||||||||||||||||||||| ||||||||||||    
T  12650210 atttcaaatagcttttcataaaaatcatttttgaaa 12650245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 451 - 509
Target Start/End: Original strand, 20805803 - 20805861
Alignment:
Q  451 aaggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaag 509  Q
    |||||||||||| |||||||| ||||||||| ||  |||||||||||||| ||| ||||    
T  20805803 aaggaaagcttcaaatgaaaaatttgtttgagtagcttatcttaaaatgtcattttaag 20805861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 73; Significance: 6e-33; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 451 - 624
Target Start/End: Complemental strand, 30847124 - 30846952
Alignment:
Q  451 aaggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaat 550  Q
    |||||||| ||| |||||||| ||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||| || |||  || |||||||    
T  30847124 aaggaaagtttcaaatgaaaaatttgtttgaataacttatcttaaaatgtcattctaagtatttcatcattttgttataattttttttttatgctaaaat 30847025  T
Q  551 ttcgaacaaaattctctnnnnnnntgctatttcaaatagcttttcataaaattcatttttgaaagatttcattt 624  Q
    || ||| |||| |||||        |||||||||||||| ||||||||||| ||||||||||| ||| ||||||    
T  30847024 tttgaa-aaaaatctcttaaaaaaagctatttcaaatagtttttcataaaaatcatttttgaacgatgtcattt 30846952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 451 - 624
Target Start/End: Complemental strand, 18431073 - 18430900
Alignment:
Q  451 aaggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattt-tattataatattctttggatactaaaa 549  Q
    |||||||||||| || ||||| |||||||||| || |||||||||||||||||||||||||||||||||||| | |||||||  | ||| ||||||||||    
T  18431073 aaggaaagcttcaaaagaaaaatttgtttgaaaaacttatcttaaaatgttattctaagtatttcatcatttgttttataattattttttgatactaaaa 18430974  T
Q  550 tttcgaacaaaattctctnnnnnnntgctatttcaaatagcttttcataaaattcatttttgaaagatttcattt 624  Q
    ||| ||| |||  ||| |         |||| |||||||| ||||||||||  ||||||||||||||||||||||    
T  18430973 ttttgaaaaaatctct-taagaaaaaactatctcaaatagtttttcataaagatcatttttgaaagatttcattt 18430900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 467 - 624
Target Start/End: Complemental strand, 30738843 - 30738688
Alignment:
Q  467 gaaaattttgtttgaataatttatcttaaaa-tgttattctaagtatttcatcattttattataatattctttggatactaaaatttcgaacaaaattct 565  Q
    ||||| ||||||||||||| ||||||||||| ||| |||||||||||||||||||||| ||||||| || |||  |||||||||||| ||  ||||||||    
T  30738843 gaaaaatttgtttgaataacttatcttaaaaatgtcattctaagtatttcatcattttgttataatttttttt--atactaaaattttga--aaaattct 30738748  T
Q  566 -ctnnnnnnntgctatttcaaatagcttttcataaaattcatttttgaaagatttcattt 624  Q
              ||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  30738747 aaaaaaaaaatgctatttcaaatagcttttcataaaaatcatttttgaaagatgtcattt 30738688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 18 - 125
Target Start/End: Original strand, 23347302 - 23347409
Alignment:
Q  18 aattcaagatagcgagtgataagagggatttgtttaaagaatttgcagatcatcaagtgcgactgcacaagaagcttgcatttctggagggaagtgtatc 117  Q
    |||| |||||||| |||| ||||||||||||||||| ||||||| | |||||||||||||| |||||||| |  ||||||||| ||||||| ||| ||||    
T  23347302 aatttaagatagccagtgctaagagggatttgtttacagaattttctgatcatcaagtgcggctgcacaacattcttgcatttttggaggggagtatatc 23347401  T
Q  118 tgaaatct 125  Q
    ||||||||    
T  23347402 tgaaatct 23347409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 18 - 133
Target Start/End: Original strand, 37329320 - 37329435
Alignment:
Q  18 aattcaagatagcgagtgataagagggatttgtttaaagaatttgcagatcatcaagtgcgactgcacaagaagcttgcatttctggagggaagtgtatc 117  Q
    ||||||||| ||| |||| || ||||||||||| |   |||||||| ||||| |||| ||| |||||||||||||||||||||||||| ||||||||       
T  37329320 aattcaagacagccagtgctatgagggatttgtattcggaatttgctgatcaccaagagcggctgcacaagaagcttgcatttctggaaggaagtgttaa 37329419  T
Q  118 tgaaatctgaaactag 133  Q
    ||||||||||||||||    
T  37329420 tgaaatctgaaactag 37329435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 18 - 133
Target Start/End: Original strand, 37340585 - 37340700
Alignment:
Q  18 aattcaagatagcgagtgataagagggatttgtttaaagaatttgcagatcatcaagtgcgactgcacaagaagcttgcatttctggagggaagtgtatc 117  Q
    |||||||||  || |||| ||||||||||||||||   |||||||| ||||| |||||||| |||||||||||||||||||||||||| | |||| |       
T  37340585 aattcaagactgccagtgctaagagggatttgttttcggaatttgctgatcaccaagtgcggctgcacaagaagcttgcatttctggaagcaagtattca 37340684  T
Q  118 tgaaatctgaaactag 133  Q
    ||||||||||||||||    
T  37340685 tgaaatctgaaactag 37340700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 475 - 624
Target Start/End: Complemental strand, 46552844 - 46552695
Alignment:
Q  475 tgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatat-tctttggatactaaaatttcgaacaaaattctctnnnnnn 573  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||  ||| || |  | ||||||||||||||||| ||| |||  |||||          
T  46552844 tgtttgaatagtttatcttaaaatgtcattctaagtatttcatcatttggttaaaaaaaatttttggatactaaaattttgaaaaaa--tctctaaaaaa 46552747  T
Q  574 nt-gctatttcaaatagcttttcataaaattcatttttgaaagatttcattt 624  Q
       |||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  46552746 aaagctatttcaaatagcttttcataaaaatcatttttgaaagatgtcattt 46552695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 451 - 552
Target Start/End: Original strand, 21224011 - 21224111
Alignment:
Q  451 aaggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaat 550  Q
    ||||||| |||| |||||||||| |||||||||| ||||||||||||| | ||||||||||||||||||| | |||||||| || |||  ||||||||||    
T  21224011 aaggaaaacttcaaatgaaaattctgtttgaatagtttatcttaaaatatcattctaagtatttcatcatctgattataat-ttttttttatactaaaat 21224109  T
Q  551 tt 552  Q
    ||    
T  21224110 tt 21224111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 453 - 552
Target Start/End: Original strand, 39993142 - 39993240
Alignment:
Q  453 ggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaattt 552  Q
    |||||||||| |||||||| || |||| ||||  |||||||||||||| |||||||||||||||||||||| || |||| || |||||||||| ||||||    
T  39993142 ggaaagcttcaaatgaaaaattggttttaatagcttatcttaaaatgtcattctaagtatttcatcattttgttttaat-ttttttggatactgaaattt 39993240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 451 - 567
Target Start/End: Original strand, 19680693 - 19680806
Alignment:
Q  451 aaggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaat 550  Q
    ||||||| |||| |||||||| |||||||||||| ||||||||||||||| ||| ||| |||||| ||||||| ||||||| || ||   ||||||||||    
T  19680693 aaggaaaacttcaaatgaaaaatttgtttgaatagtttatcttaaaatgtcattttaaatatttcgtcattttgttataattttttt---atactaaaat 19680789  T
Q  551 ttcgaacaaaattctct 567  Q
    || ||| |||| |||||    
T  19680790 tttgaaaaaaaatctct 19680806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 451 - 612
Target Start/End: Complemental strand, 36735178 - 36735019
Alignment:
Q  451 aaggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaat 550  Q
    ||||||| |||| ||| |||| |  |||||||||  |||||||||||||||||||||  |||||||||||||| |||||| ||| ||||||||| |||||    
T  36735178 aaggaaaacttcaaataaaaaatcagtttgaatagcttatcttaaaatgttattctagatatttcatcattttgttataa-attttttggataccaaaat 36735080  T
Q  551 ttcgaacaaaattctct-nnnnnnntgctatttcaaatagcttttcataaaattcatttttga 612  Q
    || ||  |||| |||||         |||||||||||||||||||||||||| ||||||||||    
T  36735079 tttga--aaaaatctctaaaaaataagctatttcaaatagcttttcataaaaatcatttttga 36735019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 451 - 617
Target Start/End: Complemental strand, 47257652 - 47257489
Alignment:
Q  451 aaggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaat 550  Q
    |||||||| ||| |||||||| || |||||| || ||||||||||||| | |||||||||||||||||||||| |||| || || ||   || |||||||    
T  47257652 aaggaaagtttcaaatgaaaaatt-gtttgattagtttatcttaaaatataattctaagtatttcatcattttgttatcatttttttattatcctaaaat 47257554  T
Q  551 ttcgaacaaaattctctnnnnnnntgctatttcaaatagcttttcataaaattcatttttgaaagat 617  Q
    || ||| |||| |||||        |||||||||||||| ||||||||||| |||||||||||||||    
T  47257553 tttgaa-aaaaatctctaaaacaa-gctatttcaaatagtttttcataaaaatcatttttgaaagat 47257489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 451 - 610
Target Start/End: Original strand, 30433927 - 30434085
Alignment:
Q  451 aaggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaat 550  Q
    |||||||||||| ||| |||| ||  ||||||||  |||||||||||||| ||| ||  |||||||||||||| ||||||| || |||||||||||||||    
T  30433927 aaggaaagcttcaaataaaaaattgatttgaatagcttatcttaaaatgtcattttagatatttcatcattttgttataat-ttttttggatactaaaat 30434025  T
Q  551 ttcgaacaaaattctctnnnnnnntgctatttcaaatagcttttcataaaattcattttt 610  Q
    ||  || |||  |||          |||||||||||||||||||||||||| ||||||||    
T  30434026 ttttaaaaaatctctaaaaaaaaaagctatttcaaatagcttttcataaaaatcattttt 30434085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 451 - 523
Target Start/End: Complemental strand, 35924989 - 35924917
Alignment:
Q  451 aaggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcatttt 523  Q
    |||||||||||| ||| |||| | ||||| ||||| |||||||||||| | ||||||||||||||||||||||    
T  35924989 aaggaaagcttcaaataaaaaatctgtttaaataacttatcttaaaatatcattctaagtatttcatcatttt 35924917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 476 - 552
Target Start/End: Original strand, 41118400 - 41118476
Alignment:
Q  476 gtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaattt 552  Q
    ||||||| || |||||||||||||| |||||||||||||||||||||| ||||||   | ||||||| |||||||||    
T  41118400 gtttgaagaacttatcttaaaatgtaattctaagtatttcatcattttgttataaatgtttttggatgctaaaattt 41118476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 477 - 552
Target Start/End: Original strand, 12113345 - 12113419
Alignment:
Q  477 tttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaattt 552  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||  ||||||| || |||  ||||||||||||    
T  12113345 tttgaatagtttatcttaaaatgtcattctaagtatttcatcatttggttataat-tttttttaatactaaaattt 12113419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 487 - 624
Target Start/End: Original strand, 1362950 - 1363087
Alignment:
Q  487 ttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaatttcg-aacaaaattctctnnnnnnntgctatttcaa 585  Q
    |||||||| |||||  || ||||||||||||||||||  |||||| || |||||||||||||||||   || |||| |||||        ||||||||||    
T  1362950 ttatcttagaatgtctttttaagtatttcatcattttgatataatttt-tttggatactaaaatttattaaaaaaaatctctaaaagaaagctatttcaa 1363048  T
Q  586 atagcttttcataaaattcatttttgaaagatttcattt 624  Q
    |||| ||||||| ||| ||||||||||||||| ||||||    
T  1363049 atagattttcattaaaatcatttttgaaagatgtcattt 1363087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 451 - 624
Target Start/End: Complemental strand, 26505122 - 26504952
Alignment:
Q  451 aaggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaat 550  Q
    |||||||||| | ||| |||| || |||||||||  |||||| ||||||  |||||||||||||||| | ||| ||| || |   || ||||||||||||    
T  26505122 aaggaaagctccaaataaaaaattcgtttgaatatattatctcaaaatgacattctaagtatttcattactttgttaaaaaaaaatt-ggatactaaaat 26505024  T
Q  551 ttcgaacaaaattctctnnnnnnntgctatttcaaatagcttttcataaaattcatttttgaaagatttcattt 624  Q
    || ||| |||  |||||        |||||||||||||||||||||||||| || |||||||||||| ||||||    
T  26505023 tttgaaaaaa--tctctaaaaagaagctatttcaaatagcttttcataaaaatcttttttgaaagatgtcattt 26504952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 576 - 624
Target Start/End: Original strand, 21224139 - 21224187
Alignment:
Q  576 gctatttcaaatagcttttcataaaattcatttttgaaagatttcattt 624  Q
    |||||||||||||| ||||||||||| ||||||||||||||| ||||||    
T  21224139 gctatttcaaatagattttcataaaaatcatttttgaaagatatcattt 21224187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 476 - 552
Target Start/End: Complemental strand, 38751527 - 38751452
Alignment:
Q  476 gtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaattt 552  Q
    |||||||||  |||||||||||||| ||||||  |||||||||||||| ||||||| || ||||||| |||||||||    
T  38751527 gtttgaatagcttatcttaaaatgtgattctagatatttcatcattttgttataat-ttttttggattctaaaattt 38751452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 451 - 612
Target Start/End: Complemental strand, 17578915 - 17578761
Alignment:
Q  451 aaggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaat 550  Q
    |||||||||||  |||||||| || |||||||||  |||||||||||||| ||     ||||||||||||||| ||||||| || |||||| ||||||||    
T  17578915 aaggaaagcttaaaatgaaaaattcgtttgaatagcttatcttaaaatgtcat-----gtatttcatcattttgttataatttt-tttggacactaaaat 17578822  T
Q  551 ttcgaacaaaattctctnnnnnnnt-gctatttcaaatagcttttcataaaattcatttttga 612  Q
    || ||| |||  |||||         | |||||||||||||||||||||||| ||||||||||    
T  17578821 tttgaaaaaa--tctctaaaaaaaaagttatttcaaatagcttttcataaaaatcatttttga 17578761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 454 - 552
Target Start/End: Complemental strand, 24475708 - 24475610
Alignment:
Q  454 gaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaattt 552  Q
    ||||||| | |||||||| || |||||||||  ||||||||||| || ||||||| |||||||||||||| ||  ||| || |||||||  ||||||||    
T  24475708 gaaagctacaaatgaaaaattcgtttgaatagcttatcttaaaacgtcattctaaatatttcatcattttgttgaaattttttttggatgataaaattt 24475610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 486 - 552
Target Start/End: Complemental strand, 29251400 - 29251335
Alignment:
Q  486 tttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaattt 552  Q
    ||||||||||||| | ||| |||||||||||||||| | ||||||| || |||||||||||||||||    
T  29251400 tttatcttaaaatataattataagtatttcatcattgtgttataat-ttttttggatactaaaattt 29251335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 464 - 530
Target Start/End: Complemental strand, 32814195 - 32814129
Alignment:
Q  464 aatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataa 530  Q
    |||||||| || |||||||||  || ||||||||| ||||||||| ||||||||||||||| |||||    
T  32814195 aatgaaaaattggtttgaatagcttctcttaaaatattattctaaatatttcatcattttactataa 32814129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 451 - 624
Target Start/End: Complemental strand, 45406587 - 45406412
Alignment:
Q  451 aaggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattcttt-ggatactaaaa 549  Q
    |||||||| ||  ||| |||| || |||||||||  |||||||||||| | ||| ||||||||| |||||||| ||||||| || ||| |||||||||||    
T  45406587 aaggaaagttttaaataaaaaattagtttgaatagcttatcttaaaatatcattgtaagtattttatcattttgttataattttgtttcggatactaaaa 45406488  T
Q  550 tttcgaacaaaattctctnnnnnnntgctatttcaaatag-cttttcataaaattcatttttgaaagatttcattt 624  Q
     || | | |||| |||||        ||||||||||||||  ||||||||||| | |||||| |||||| ||||||    
T  45406487 ctttggaaaaaagtctctaaaaaaaagctatttcaaatagttttttcataaaaattattttttaaagatgtcattt 45406412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 576 - 617
Target Start/End: Complemental strand, 21696822 - 21696781
Alignment:
Q  576 gctatttcaaatagcttttcataaaattcatttttgaaagat 617  Q
    |||||||||||||||||||||| ||| |||||||||||||||    
T  21696822 gctatttcaaatagcttttcatgaaaatcatttttgaaagat 21696781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 576 - 617
Target Start/End: Complemental strand, 24475588 - 24475547
Alignment:
Q  576 gctatttcaaatagcttttcataaaattcatttttgaaagat 617  Q
    |||||||||||||||||||||||||| | |||||||||||||    
T  24475588 gctatttcaaatagcttttcataaaaataatttttgaaagat 24475547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 576 - 624
Target Start/End: Complemental strand, 7719806 - 7719758
Alignment:
Q  576 gctatttcaaatagcttttcataaaattcatttttgaaagatttcattt 624  Q
    ||||||||||||| |||||||||||| |||||||||||| || ||||||    
T  7719806 gctatttcaaatatcttttcataaaaatcatttttgaaaaatgtcattt 7719758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 584 - 624
Target Start/End: Original strand, 12113437 - 12113477
Alignment:
Q  584 aaatagcttttcataaaattcatttttgaaagatttcattt 624  Q
    |||||||||||||||||| ||||||||||||||| ||||||    
T  12113437 aaatagcttttcataaaaatcatttttgaaagatgtcattt 12113477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 464 - 523
Target Start/End: Original strand, 775669 - 775728
Alignment:
Q  464 aatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcatttt 523  Q
    |||||||| || |||||||||  || ||||||||| ||||||||| ||||||||||||||    
T  775669 aatgaaaaattggtttgaatagcttctcttaaaatattattctaaatatttcatcatttt 775728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 578 - 624
Target Start/End: Complemental strand, 35924858 - 35924812
Alignment:
Q  578 tatttcaaatagcttttcataaaattcatttttgaaagatttcattt 624  Q
    ||||||||||| |||||||||||| |||||||||||| || ||||||    
T  35924858 tatttcaaataacttttcataaaaatcatttttgaaaaatgtcattt 35924812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 578 - 624
Target Start/End: Original strand, 47117662 - 47117708
Alignment:
Q  578 tatttcaaatagcttttcataaaattcatttttgaaagatttcattt 624  Q
    |||||||||||| ||||||||||| |||||||| |||||| ||||||    
T  47117662 tatttcaaatagtttttcataaaaatcattttttaaagatgtcattt 47117708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 487 - 524
Target Start/End: Complemental strand, 31681871 - 31681834
Alignment:
Q  487 ttatcttaaaatgttattctaagtatttcatcatttta 524  Q
    |||||||||||||| ||||||||||||||| |||||||    
T  31681871 ttatcttaaaatgtcattctaagtatttcaacatttta 31681834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 459 - 524
Target Start/End: Original strand, 31901104 - 31901169
Alignment:
Q  459 cttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcatttta 524  Q
    |||| |||||||| |  |||||||||   ||||||||||||| ||||||||||||||| |||||||    
T  31901104 cttcaaatgaaaaatccgtttgaatatcatatcttaaaatgtcattctaagtatttcaacatttta 31901169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 487 - 524
Target Start/End: Original strand, 31916824 - 31916861
Alignment:
Q  487 ttatcttaaaatgttattctaagtatttcatcatttta 524  Q
    |||||||||||||| ||||||||||||||| |||||||    
T  31916824 ttatcttaaaatgtcattctaagtatttcaacatttta 31916861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 487 - 524
Target Start/End: Original strand, 31950502 - 31950539
Alignment:
Q  487 ttatcttaaaatgttattctaagtatttcatcatttta 524  Q
    |||||||||||||| ||||||||||||||| |||||||    
T  31950502 ttatcttaaaatgtcattctaagtatttcaacatttta 31950539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 2e-32; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 478 - 622
Target Start/End: Original strand, 44400451 - 44400594
Alignment:
Q  478 ttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaatttcgaacaaaattctctnnnnnnntgc 577  Q
    ||||||| ||||||||||||| | |||||||||||||||||||||| |||||||||| ||||||||||||| ||| ||| |||| |||||        ||    
T  44400451 ttgaatagtttatcttaaaatataattctaagtatttcatcattttgttataatattttttggatactaaatttttgaa-aaaaatctctaaaaaaaggc 44400549  T
Q  578 tatttcaaatagcttttcataaaattcatttttgaaagatttcat 622  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||    
T  44400550 tatttcaaatagcttttcataaaaatcatttttgaaagatgtcat 44400594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 451 - 624
Target Start/End: Complemental strand, 21511730 - 21511558
Alignment:
Q  451 aaggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaat 550  Q
    |||||||||||| |||||||| || |||||||||  |||||||||||||| |||||||||||||||||||||| |||||  ||| ||| |||||||||||    
T  21511730 aaggaaagcttcaaatgaaaagttcgtttgaatagattatcttaaaatgtcattctaagtatttcatcattttgttata--atttttttgatactaaaat 21511633  T
Q  551 ttcgaacaaaat-tctctnnnnnnntgctatttcaaatagcttttcataaaattcatttttgaaagatttcattt 624  Q
    ||  || ||||| ||| |        |||| ||||||| | ||||||||||| ||||||||||||||| ||||||    
T  21511632 tttcaaaaaaatctctataaaaaaaagctaattcaaattgattttcataaaaatcatttttgaaagatgtcattt 21511558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 451 - 624
Target Start/End: Original strand, 11660569 - 11660741
Alignment:
Q  451 aaggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaat 550  Q
    |||||||||||  ||| |||| ||| ||||||||  |||| ||||||||| ||| ||||||||||| | |||| ||||||| || |||  ||||||||||    
T  11660569 aaggaaagcttgaaataaaaaatttatttgaatagcttattttaaaatgtcattataagtatttcacctttttgttataattttttttaaatactaaaat 11660668  T
Q  551 ttcgaacaaaattctctnnnnnnntgctatttcaaatagcttttcataaaattcatttttgaaagatttcattt 624  Q
    || ||| ||||| ||||        | |||||||||||||||||||||||| ||||||||||||||| ||||||    
T  11660669 tttgaaaaaaat-ctctaaaaacaagttatttcaaatagcttttcataaaaatcatttttgaaagatgtcattt 11660741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 451 - 624
Target Start/End: Original strand, 11669738 - 11669910
Alignment:
Q  451 aaggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaat 550  Q
    |||||||||||  ||| |||| ||| ||||||||  |||| ||||||||| ||| ||||||||||| | |||| ||||||| || |||  ||||||||||    
T  11669738 aaggaaagcttgaaataaaaaatttatttgaatagcttattttaaaatgtcattataagtatttcacctttttgttataattttttttaaatactaaaat 11669837  T
Q  551 ttcgaacaaaattctctnnnnnnntgctatttcaaatagcttttcataaaattcatttttgaaagatttcattt 624  Q
    || ||| ||||| ||||        | |||||||||||||||||||||||| ||||||||||||||| ||||||    
T  11669838 tttgaaaaaaat-ctctaaaaacaagttatttcaaatagcttttcataaaaatcatttttgaaagatgtcattt 11669910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 464 - 552
Target Start/End: Complemental strand, 31801338 - 31801251
Alignment:
Q  464 aatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaattt 552  Q
    |||||||| |||||||||||| ||||||||||||||| ||| | |||||||||||||||| ||||||| || |||||||||||||||||    
T  31801338 aatgaaaaatttgtttgaatagtttatcttaaaatgtaatttttagtatttcatcattttgttataat-ttgtttggatactaaaattt 31801251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 451 - 552
Target Start/End: Complemental strand, 33562065 - 33561965
Alignment:
Q  451 aaggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaat 550  Q
    |||||||| ||| |||||||| || |||||||||  |||||||||||||| ||| ||||||||| |||||||| ||||||| || |||||||||||||||    
T  33562065 aaggaaagtttcaaatgaaaaattcgtttgaatatcttatcttaaaatgtcattataagtattttatcattttgttataat-ttttttggatactaaaat 33561967  T
Q  551 tt 552  Q
    ||    
T  33561966 tt 33561965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 451 - 528
Target Start/End: Original strand, 2179206 - 2179283
Alignment:
Q  451 aaggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattat 528  Q
    |||||||||||| ||| |||| | ||||||||||| |||||||||||||| ||||||| |||||||||||||| ||||    
T  2179206 aaggaaagcttcaaataaaaaatgtgtttgaataacttatcttaaaatgtcattctaaatatttcatcattttgttat 2179283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 451 - 552
Target Start/End: Complemental strand, 26624123 - 26624022
Alignment:
Q  451 aaggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaat 550  Q
    ||||||| |||| |||||||  ||||||||||||  |||||||| ||||||||| |||||| ||||| ||||| ||||||| || |||||||| ||||||    
T  26624123 aaggaaaacttcaaatgaaagatttgtttgaatatattatcttacaatgttattttaagtacttcattattttgttataattttttttggataataaaat 26624024  T
Q  551 tt 552  Q
    ||    
T  26624023 tt 26624022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 451 - 523
Target Start/End: Original strand, 12177851 - 12177923
Alignment:
Q  451 aaggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcatttt 523  Q
    |||||||| ||| |||||||| || |||||||||| |||||||||||||| ||| ||||||||||||||||||    
T  12177851 aaggaaagtttcaaatgaaaaattcgtttgaataacttatcttaaaatgtcattttaagtatttcatcatttt 12177923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 451 - 523
Target Start/End: Original strand, 12422279 - 12422351
Alignment:
Q  451 aaggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcatttt 523  Q
    |||||||| ||| |||||||| || |||||||||| |||||||||||||| ||| ||||||||||||||||||    
T  12422279 aaggaaagtttcaaatgaaaaattcgtttgaataacttatcttaaaatgtcattttaagtatttcatcatttt 12422351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 452 - 552
Target Start/End: Original strand, 17934262 - 17934362
Alignment:
Q  452 aggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaatt 551  Q
    ||||||||||  |||||||| | | |||||||| |||||| |||||||| |||||| |||| |||||||||  ||||||| || ||||||||||||||||    
T  17934262 aggaaagcttaaaatgaaaaatctatttgaatagtttatcctaaaatgtcattctaggtatgtcatcatttggttataattttttttggatactaaaatt 17934361  T
Q  552 t 552  Q
    |    
T  17934362 t 17934362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 451 - 614
Target Start/End: Original strand, 41636414 - 41636577
Alignment:
Q  451 aaggaaagcttctaatgaaaattt-tgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaa 549  Q
    ||||||| |||| ||||||||  | |||||||||| ||||||||||||||| |||| ||||||||||||||||  || |||| || |||  |||||||||    
T  41636414 aaggaaaacttcaaatgaaaaaatctgtttgaatagtttatcttaaaatgtcattcaaagtatttcatcatttggttgtaat-ttttttttatactaaaa 41636512  T
Q  550 tttcgaacaaaattctctnnnnnnntgctatttcaaatagcttttcataaaattcatttttgaaa 614  Q
    ||| ||| |||  |||          |||||||||||||||||||||||||| ||||||||||||    
T  41636513 ttttgaaaaaatctctaaaaaaaaaagctatttcaaatagcttttcataaaaatcatttttgaaa 41636577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 455 - 624
Target Start/End: Original strand, 32821616 - 32821781
Alignment:
Q  455 aaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaatttcg 554  Q
    |||||||| |||||||| |  ||||||||| ||||| ||||||||| |||||||||||||||||||||  ||||||| || |||  |||||||||||| |    
T  32821616 aaagcttcaaatgaaaaatccgtttgaatagtttattttaaaatgtcattctaagtatttcatcatttggttataat-ttttttttatactaaaattttg 32821714  T
Q  555 aacaaaattctctnnnnnnntgctatttcaaatagcttttcataaaattcatttttgaaagatttcattt 624  Q
    || |||  |||            |||||||||||||||||||||||| |||||||| |||||| ||||||    
T  32821715 aaaaaacctctaaaaaaaaa---tatttcaaatagcttttcataaaaatcatttttaaaagatgtcattt 32821781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 451 - 508
Target Start/End: Original strand, 25328686 - 25328743
Alignment:
Q  451 aaggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaa 508  Q
    |||||||||||| |||||||| ||||||||||||| |||||||||||||| |||||||    
T  25328686 aaggaaagcttcaaatgaaaaatttgtttgaataacttatcttaaaatgtaattctaa 25328743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 451 - 552
Target Start/End: Original strand, 45364219 - 45364318
Alignment:
Q  451 aaggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaat 550  Q
    |||||||||||  |||||||| || ||||||||| |||| |||||||||| ||| |||||||||||||||||| ||||||| || |||  ||||||||||    
T  45364219 aaggaaagctta-aatgaaaaattcgtttgaatagtttaacttaaaatgtcattttaagtatttcatcattttgttataat-ttttttttatactaaaat 45364316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 453 - 624
Target Start/End: Original strand, 32178313 - 32178479
Alignment:
Q  453 ggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaattt 552  Q
    |||||||||| |||||||| || ||||||||   |||||||||| ||| ||| ||| |||||||||||||| |||| ||  |||||  ||| ||||||||    
T  32178313 ggaaagcttcaaatgaaaagttagtttgaattgcttatcttaaattgtcattttaaatatttcatcattttgttatgat--tctttt-atattaaaattt 32178409  T
Q  553 cgaacaaaattctctnnnnnnntgctatttcaaatagcttttcataaaattcatttttgaaagatttcattt 624  Q
     ||| |||  |||||        ||||||||||||| |||||||||||| ||||||||||||||| ||||||    
T  32178410 tgaaaaaa--tctctaaaaaatagctatttcaaataacttttcataaaaatcatttttgaaagatgtcattt 32178479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 487 - 624
Target Start/End: Original strand, 41844889 - 41845025
Alignment:
Q  487 ttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaatttcgaacaaaattctctnnnnnnntgctatttcaaa 586  Q
    |||||||||||||| ||||||  |||||||||||||| ||||||| || ||||||||||||||||| ||| |||  |||          |||||||||||    
T  41844889 ttatcttaaaatgtgattctagatatttcatcattttgttataat-ttttttggatactaaaattttgaaaaaatctctaaaaaaaaaagctatttcaaa 41844987  T
Q  587 tagcttttcataaaattcatttttgaaagatttcattt 624  Q
    |||||||||||||||   |||||||||| || ||||||    
T  41844988 tagcttttcataaaaaatatttttgaaatatatcattt 41845025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 451 - 614
Target Start/End: Complemental strand, 775451 - 775291
Alignment:
Q  451 aaggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaat 550  Q
    |||||||  ||| |||||||| || |||||||||| ||||||||||| ||   |||||||||||||||||||| |||| || || |||  ||||||||||    
T  775451 aaggaaatattcaaatgaaaaattcgtttgaataacttatcttaaaacgtctctctaagtatttcatcattttgttat-attttttttttatactaaaat 775353  T
Q  551 ttcgaacaaaattctctnnnnnnntgctatttcaaatagcttttcataaaattcatttttgaaa 614  Q
    || ||  || | |||||        |||||||||||||||||||||||||| ||| ||||||||    
T  775352 tttga--aataatctctaaaaaaaagctatttcaaatagcttttcataaaaatcagttttgaaa 775291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 451 - 614
Target Start/End: Complemental strand, 781105 - 780945
Alignment:
Q  451 aaggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaat 550  Q
    |||||||  ||| |||||||| || |||||||||| ||||||||||| ||   |||||||||||||||||||| |||| || || |||  ||||||||||    
T  781105 aaggaaatattcaaatgaaaaattcgtttgaataacttatcttaaaacgtctctctaagtatttcatcattttgttat-attttttttttatactaaaat 781007  T
Q  551 ttcgaacaaaattctctnnnnnnntgctatttcaaatagcttttcataaaattcatttttgaaa 614  Q
    || ||  || | |||||        |||||||||||||||||||||||||| ||| ||||||||    
T  781006 tttga--aataatctctaaaaaaaagctatttcaaatagcttttcataaaaatcagttttgaaa 780945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 451 - 552
Target Start/End: Original strand, 5967341 - 5967440
Alignment:
Q  451 aaggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaat 550  Q
    ||||||| |||| |||| ||| || | ||||||| ||||||||||||||| ||||||| |||||||||||||  ||||||| || |||  ||||||||||    
T  5967341 aaggaaaacttcaaatggaaaattcgattgaatagtttatcttaaaatgtcattctaaatatttcatcatttggttataatttttttt--atactaaaat 5967438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 578 - 624
Target Start/End: Original strand, 17934387 - 17934433
Alignment:
Q  578 tatttcaaatagcttttcataaaattcatttttgaaagatttcattt 624  Q
    |||||||||||||||||||||||| ||| ||||||||||| ||||||    
T  17934387 tatttcaaatagcttttcataaaaatcagttttgaaagatgtcattt 17934433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 453 - 523
Target Start/End: Original strand, 25735949 - 25736019
Alignment:
Q  453 ggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcatttt 523  Q
    |||||||||| |||||||| ||| ||| ||||| |||||||||||||| |||||||  |||| ||||||||    
T  25735949 ggaaagcttcaaatgaaaaatttctttcaataacttatcttaaaatgtaattctaaaaattttatcatttt 25736019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 576 - 617
Target Start/End: Complemental strand, 31801242 - 31801201
Alignment:
Q  576 gctatttcaaatagcttttcataaaattcatttttgaaagat 617  Q
    ||||||| |||||||||||||||||| |||||||||||||||    
T  31801242 gctattttaaatagcttttcataaaaatcatttttgaaagat 31801201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 487 - 552
Target Start/End: Original strand, 33937117 - 33937181
Alignment:
Q  487 ttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaattt 552  Q
    |||||||||||||| ||||||  ||||| |||||||| ||||||| || |||||||||||||||||    
T  33937117 ttatcttaaaatgtaattctagatattttatcattttgttataat-ttttttggatactaaaattt 33937181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 478 - 530
Target Start/End: Original strand, 13415910 - 13415962
Alignment:
Q  478 ttgaataatttatcttaaaatgttattctaagtatttcatcattttattataa 530  Q
    |||||||| |||||||||||||||||||||| ||||| ||||| || ||||||    
T  13415910 ttgaataacttatcttaaaatgttattctaaatatttaatcatattcttataa 13415962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 464 - 529
Target Start/End: Complemental strand, 788761 - 788696
Alignment:
Q  464 aatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattata 529  Q
    |||||||| ||||||||||||| |||||||| || ||   ||||| |||||||||||||| |||||    
T  788761 aatgaaaaatttgtttgaataacttatcttacaacgtctctctaaatatttcatcattttgttata 788696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 455 - 528
Target Start/End: Original strand, 5335642 - 5335715
Alignment:
Q  455 aaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattat 528  Q
    |||||||  |||||||| || |||||||||| ||| | | |||||  |||||||||||||||||||||| ||||    
T  5335642 aaagctttaaatgaaaaattcgtttgaataacttacccttaaatgcaattctaagtatttcatcattttgttat 5335715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 70; Significance: 4e-31; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 468 - 617
Target Start/End: Original strand, 13953710 - 13953857
Alignment:
Q  468 aaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaatttcgaacaaaattctct 567  Q
    |||| |||||||||||| ||||| ||||||||| |||||||||||||||||||||| |||||||  | ||||||||||||||||| ||  |||| |||||    
T  13953710 aaaaatttgtttgaatagtttatattaaaatgtaattctaagtatttcatcattttgttataattatttttggatactaaaattttga--aaaaatctct 13953807  T
Q  568 nnnnnnntgctatttcaaatagcttttcataaaattcatttttgaaagat 617  Q
            |||||||||||||||||||||||||| |||||||||||||||    
T  13953808 aaaaaaaagctatttcaaatagcttttcataaaaatcatttttgaaagat 13953857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 451 - 624
Target Start/End: Original strand, 37597280 - 37597450
Alignment:
Q  451 aaggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaat 550  Q
    |||||||||||| |||||||| || |||||||||  ||| |||||||||| |||||||||||||||||||||  ||||||| || |||||||||||||||    
T  37597280 aaggaaagcttcaaatgaaaaattcgtttgaatagcttaacttaaaatgtcattctaagtatttcatcatttggttataattttttttggatactaaaat 37597379  T
Q  551 ttcgaacaaaattctctnnnnnnntgctatttcaaatagcttttcataaaattcatttttgaaagatttcattt 624  Q
    || ||  |||| ||||         |||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  37597380 tttga--aaaaatctc-aaaaaaaagctatttcaaatagcttttcataaaaatcatttttgaaagatgtcattt 37597450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 451 - 610
Target Start/End: Original strand, 13954315 - 13954473
Alignment:
Q  451 aaggaaagcttctaatgaaaattt-tgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaa 549  Q
    |||||||| ||| ||||||||  | |||||||||| ||||||||||||||| |||||||||||||||||||||| |||||||  | |||||| |||||||    
T  13954315 aaggaaagtttcgaatgaaaaaatctgtttgaatagtttatcttaaaatgtaattctaagtatttcatcattttgttataattatttttggaaactaaaa 13954414  T
Q  550 tttcgaacaaaattctctnnnnnnntgctatttcaaatagcttttcataaaattcattttt 610  Q
    ||| ||  |||| ||||         |||||||||||||||||||||||||| ||||||||    
T  13954415 ttttga--aaaaatctcaaaaaaaaagctatttcaaatagcttttcataaaaatcattttt 13954473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 454 - 552
Target Start/End: Original strand, 28606124 - 28606221
Alignment:
Q  454 gaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaattt 552  Q
    ||||||||| |||||||| |||||||||||| ||||||||||||||| |||||||||||||||||||||  ||||||| || |||  ||||||||||||    
T  28606124 gaaagcttcaaatgaaaaatttgtttgaatagtttatcttaaaatgtgattctaagtatttcatcatttggttataat-ttttttttatactaaaattt 28606221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 451 - 624
Target Start/End: Complemental strand, 28606818 - 28606648
Alignment:
Q  451 aaggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaat 550  Q
    |||||||||||| |||||||| |   ||| |||| ||||||||||||||| ||||||||||||| |||||||| ||||||| || |||||||||| ||||    
T  28606818 aaggaaagcttcaaatgaaaaatccatttcaatagtttatcttaaaatgtcattctaagtattttatcattttgttataattttttttggatact-aaat 28606720  T
Q  551 ttcgaacaaaattctctnnnnnnntgctatttcaaatagcttttcataaaattcatttttgaaagatttcattt 624  Q
    || ||  |||| |||||          |||||||||||||||||||||||| |||||||||||| || ||||||    
T  28606719 tttga--aaaaatctctaaaaaaaaattatttcaaatagcttttcataaaaatcatttttgaaaaatgtcattt 28606648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 451 - 522
Target Start/End: Complemental strand, 45234670 - 45234599
Alignment:
Q  451 aaggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattt 522  Q
    |||||||||||| |||||||| ||||||| |||| ||||||||||||||| |||||||||||||||||||||    
T  45234670 aaggaaagcttcgaatgaaaaatttgtttcaatagtttatcttaaaatgtcattctaagtatttcatcattt 45234599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 451 - 552
Target Start/End: Original strand, 12407990 - 12408089
Alignment:
Q  451 aaggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaat 550  Q
    |||||||||||| |||||||| | | |||||||| ||||||||||||||| |||||||||||||||||||||  ||||||| || |||  ||||||||||    
T  12407990 aaggaaagcttcaaatgaaaaatctatttgaatagtttatcttaaaatgtcattctaagtatttcatcatttcgttataatttttttt--atactaaaat 12408087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 451 - 531
Target Start/End: Original strand, 12392125 - 12392205
Alignment:
Q  451 aaggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataat 531  Q
    |||||||||||| |||||||| | | |||||||| ||||||||||||||| |||||||||||||||||||||  |||||||    
T  12392125 aaggaaagcttcaaatgaaaaatctatttgaatagtttatcttaaaatgtcattctaagtatttcatcatttcgttataat 12392205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 451 - 624
Target Start/End: Complemental strand, 17222136 - 17221964
Alignment:
Q  451 aaggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaat 550  Q
    |||||||| ||| |||||||| |  |||||||||  ||||||| |||||| ||| || |||||||||||| || |||||| |   |||||||||||||||    
T  17222136 aaggaaagtttcaaatgaaaaatcagtttgaatagcttatcttcaaatgtcattttatgtatttcatcatcttgttataaaaaattttggatactaaaat 17222037  T
Q  551 ttcgaacaaaattctctnnnnnnntgctatttcaaatagcttttcataaaattcatttttgaaagatttcattt 624  Q
    || ||| |||| |||||        ||||||||||||||| |||||||||| | ||||||||||||| ||||||    
T  17222036 tttgaaaaaaaatctctaaaaaaaagctatttcaaatagc-tttcataaaaattatttttgaaagatatcattt 17221964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 476 - 552
Target Start/End: Complemental strand, 28919111 - 28919035
Alignment:
Q  476 gtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaattt 552  Q
    |||||||||| |||||||||||||| ||||||| |||||||||||||| ||||||| || |||||||| ||||||||    
T  28919111 gtttgaataacttatcttaaaatgtcattctaaatatttcatcattttgttataattttttttggataataaaattt 28919035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 464 - 552
Target Start/End: Complemental strand, 37668669 - 37668581
Alignment:
Q  464 aatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaattt 552  Q
    ||||||||||| ||||||||| ||||||| ||||||| ||||||| ||||| |||||||| || |||| ||||||||||  ||||||||    
T  37668669 aatgaaaatttcgtttgaatagtttatctaaaaatgtcattctaaatattttatcattttgttgtaattttctttggatgataaaattt 37668581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 459 - 522
Target Start/End: Complemental strand, 9157852 - 9157789
Alignment:
Q  459 cttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattt 522  Q
    |||| ||| |||| ||||||||||||||||||||||||| || |||||||||||||||||||||    
T  9157852 cttcaaataaaaaatttgtttgaataatttatcttaaaaggtcattctaagtatttcatcattt 9157789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 476 - 617
Target Start/End: Original strand, 25318015 - 25318155
Alignment:
Q  476 gtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaatttcgaacaaaattctctnnnnnnnt 575  Q
    ||||||||| ||||||||||||||| ||| |||||||| ||||||||| ||||||| || ||| ||||||||||||| |   |||| |||||            
T  25318015 gtttgaatagtttatcttaaaatgtaattttaagtattccatcattttgttataat-tttttttgatactaaaattttg---aaaaatctctaaaaaaaa 25318110  T
Q  576 gctatttc---aaatagcttttcataaaattcatttttgaaagat 617  Q
    ||||||||   |||||||||||||||||| |||||||||||||||    
T  25318111 gctatttcataaaatagcttttcataaaaatcatttttgaaagat 25318155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 478 - 613
Target Start/End: Complemental strand, 43094756 - 43094624
Alignment:
Q  478 ttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaatttcgaacaaaattctctnnnnnnntgc 577  Q
    ||||||| ||||||||||||||| ||||| |||||||||||||||| ||||||| || |||||||| ||||||||   | |||| |||||         |    
T  43094756 ttgaatagtttatcttaaaatgtcattcttagtatttcatcattttgttataat-ttttttggatattaaaattt--taaaaaaatctctaaaaataaac 43094660  T
Q  578 tatttcaaatagcttttcataaaattcatttttgaa 613  Q
    ||||||||||||||||| |||||| |||||||||||    
T  43094659 tatttcaaatagctttttataaaaatcatttttgaa 43094624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 577 - 624
Target Start/End: Original strand, 36802919 - 36802966
Alignment:
Q  577 ctatttcaaatagcttttcataaaattcatttttgaaagatttcattt 624  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  36802919 ctatttcaaatagcttttcataaaaatcatttttgaaagatatcattt 36802966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 464 - 514
Target Start/End: Original strand, 8319947 - 8319997
Alignment:
Q  464 aatgaaaattttgtttgaataatttatcttaaaatgttattctaagtattt 514  Q
    |||||||| ||||||||||||| |||||||||||||| |||||||||||||    
T  8319947 aatgaaaaatttgtttgaataacttatcttaaaatgtcattctaagtattt 8319997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 577 - 624
Target Start/End: Complemental strand, 9157723 - 9157676
Alignment:
Q  577 ctatttcaaatagcttttcataaaattcatttttgaaagatttcattt 624  Q
    ||||||||||||| ||||||||||| ||||||||||||||| ||||||    
T  9157723 ctatttcaaatagtttttcataaaaatcatttttgaaagatgtcattt 9157676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 577 - 624
Target Start/End: Complemental strand, 45234546 - 45234499
Alignment:
Q  577 ctatttcaaatagcttttcataaaattcatttttgaaagatttcattt 624  Q
    ||||||||||||||||||||||||| |||| |||||||||| ||||||    
T  45234546 ctatttcaaatagcttttcataaaaatcatatttgaaagatgtcattt 45234499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 502 - 548
Target Start/End: Complemental strand, 2355243 - 2355197
Alignment:
Q  502 attctaagtatttcatcattttattataatattctttggatactaaa 548  Q
    ||||||||||||||||||||||| ||||||||| |||| ||||||||    
T  2355243 attctaagtatttcatcattttactataatattttttgaatactaaa 2355197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 576 - 622
Target Start/End: Original strand, 21698787 - 21698833
Alignment:
Q  576 gctatttcaaatagcttttcataaaattcatttttgaaagatttcat 622  Q
    ||||||||||||||||||||||| || ||||||||||||||| ||||    
T  21698787 gctatttcaaatagcttttcatagaaatcatttttgaaagatgtcat 21698833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 454 - 500
Target Start/End: Complemental strand, 42834748 - 42834702
Alignment:
Q  454 gaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgt 500  Q
    ||||||||| |||||||| || |||||||||||||||||||||||||    
T  42834748 gaaagcttcaaatgaaaaattcgtttgaataatttatcttaaaatgt 42834702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 576 - 617
Target Start/End: Complemental strand, 28919011 - 28918970
Alignment:
Q  576 gctatttcaaatagcttttcataaaattcatttttgaaagat 617  Q
    |||||||||||||||||||||| ||| |||||||||||||||    
T  28919011 gctatttcaaatagcttttcattaaaatcatttttgaaagat 28918970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 577 - 617
Target Start/End: Original strand, 8320037 - 8320077
Alignment:
Q  577 ctatttcaaatagcttttcataaaattcatttttgaaagat 617  Q
    ||||||||||||| ||||||||||| |||||||||||||||    
T  8320037 ctatttcaaatagtttttcataaaaatcatttttgaaagat 8320077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 577 - 623
Target Start/End: Original strand, 28336939 - 28336985
Alignment:
Q  577 ctatttcaaatagcttttcataaaattcatttttgaaagatttcatt 623  Q
    ||||||||||||||||||||||||| | |||||| |||||| |||||    
T  28336939 ctatttcaaatagcttttcataaaaattatttttcaaagatgtcatt 28336985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 477 - 522
Target Start/End: Original strand, 5277737 - 5277782
Alignment:
Q  477 tttgaataatttatcttaaaatgttattctaagtatttcatcattt 522  Q
    ||||||||  |||||||||||||| ||||||| |||||||||||||    
T  5277737 tttgaatagcttatcttaaaatgtcattctaactatttcatcattt 5277782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 577 - 610
Target Start/End: Original strand, 48268811 - 48268844
Alignment:
Q  577 ctatttcaaatagcttttcataaaattcattttt 610  Q
    ||||||||||||||||||||||||| ||||||||    
T  48268811 ctatttcaaatagcttttcataaaaatcattttt 48268844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 4e-31; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 451 - 624
Target Start/End: Original strand, 39952126 - 39952295
Alignment:
Q  451 aaggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaat 550  Q
    |||||||||||| ||| |||| ||| |||||||||||||||||||||||| |||||||||||||||||||||| ||||||| || |||  ||| ||||||    
T  39952126 aaggaaagcttcaaataaaaaatttatttgaataatttatcttaaaatgtcattctaagtatttcatcattttgttataatttttttt--atattaaaat 39952223  T
Q  551 ttcgaacaaaattctctnnnnnnntgctatttcaaatagcttttcataaaattcatttttgaaagatttcattt 624  Q
    || ||| |||| |||||        |||||||||||||| ||||||||||| ||||||||||||||| ||||||    
T  39952224 tttgaa-aaaaatctctaaaaaaa-gctatttcaaatagtttttcataaaaatcatttttgaaagatctcattt 39952295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 451 - 624
Target Start/End: Original strand, 41670079 - 41670252
Alignment:
Q  451 aaggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaat 550  Q
    |||||||  ||| |||||||||||||||||||||  |||| ||||||||| |||||||||||||||||||||| ||||||| || |||||||||||||||    
T  41670079 aaggaaattttcaaatgaaaattttgtttgaatagcttatattaaaatgtcattctaagtatttcatcattttgttataattttttttggatactaaaat 41670178  T
Q  551 ttcgaacaaaattctctnnnnnnntgctatttcaaatagcttttcataaaattcatttttgaaagatttcattt 624  Q
    || ||| |||  |||           ||||||||||||||||||||||||| |||||||||||| || ||||||    
T  41670179 tttgaaaaaatctctaaaaaaaaaaactatttcaaatagcttttcataaaaatcatttttgaaatatgtcattt 41670252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 454 - 624
Target Start/End: Complemental strand, 41399239 - 41399068
Alignment:
Q  454 gaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaatttc 553  Q
    ||||||||| |||||||| | |||||||||| ||||||||||||| | |||||| |||||||| |||||  ||||||| || |||  ||||||||||||     
T  41399239 gaaagcttcaaatgaaaaatctgtttgaatagtttatcttaaaatatcattctaggtatttcaccatttggttataattttttttttatactaaaatttt 41399140  T
Q  554 gaacaaaattctctnnnnnnntgcta-tttcaaatagcttttcataaaattcatttttgaaagatttcattt 624  Q
    ||| ||| ||||          |||| |||||||||||||||||||||| ||||||||||||||| ||||||    
T  41399139 gaaaaaatttctaaaaaaaaaagctattttcaaatagcttttcataaaagtcatttttgaaagatgtcattt 41399068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 451 - 531
Target Start/End: Original strand, 32493538 - 32493618
Alignment:
Q  451 aaggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataat 531  Q
    |||||||||||| || ||||| |||||||||||| ||||||||||||||| |||||||||||||||||||||  |||||||    
T  32493538 aaggaaagcttcaaaagaaaaatttgtttgaatagtttatcttaaaatgtcattctaagtatttcatcatttggttataat 32493618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 455 - 530
Target Start/End: Original strand, 3436405 - 3436480
Alignment:
Q  455 aaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataa 530  Q
    |||||||| |||||||| ||  |||||||| ||||||||||||||| |||||||||||||||||||||| ||||||    
T  3436405 aaagcttcaaatgaaaaattcatttgaatagtttatcttaaaatgtcattctaagtatttcatcattttgttataa 3436480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 454 - 552
Target Start/End: Complemental strand, 6201485 - 6201388
Alignment:
Q  454 gaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaattt 552  Q
    ||||||||| |||||||| |  ||||||||| ||||||||||||| | ||| ||||||||||||||||| |||||||| || ||| |||||||||||||    
T  6201485 gaaagcttcaaatgaaaaatccgtttgaatagtttatcttaaaatatcattataagtatttcatcatttgattataat-tttttttgatactaaaattt 6201388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 454 - 531
Target Start/End: Complemental strand, 14660754 - 14660677
Alignment:
Q  454 gaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataat 531  Q
    ||||||||| |||||||| |  ||||||||| ||||||||||||||| ||||||||||||| |||||||  |||||||    
T  14660754 gaaagcttcaaatgaaaaatcggtttgaatagtttatcttaaaatgtcattctaagtattttatcatttggttataat 14660677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 455 - 552
Target Start/End: Complemental strand, 42461120 - 42461024
Alignment:
Q  455 aaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaattt 552  Q
    |||||||| ||| |||| |  |||||||||  |||||||||||| | ||||||  |||||||||||||| |||||||||| |||||||||||||||||    
T  42461120 aaagcttcaaataaaaaatcggtttgaatagcttatcttaaaatatcattctagatatttcatcattttgttataatatt-tttggatactaaaattt 42461024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 451 - 531
Target Start/End: Complemental strand, 7634835 - 7634756
Alignment:
Q  451 aaggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataat 531  Q
    |||||||||||  |||||||| || |||||||||  ||| |||||||||| |||||||||||||||||||||| |||||||    
T  7634835 aaggaaagctta-aatgaaaaattcgtttgaatagcttaacttaaaatgtcattctaagtatttcatcattttgttataat 7634756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 476 - 624
Target Start/End: Complemental strand, 21647137 - 21646995
Alignment:
Q  476 gtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaatttcgaacaaaattctctnnnnnnnt 575  Q
    |||||||||| |||||||||||||| ||||||  |||||||||||||| ||||||| || ||   |||||||||||| ||| |||  ||| |            
T  21647137 gtttgaataacttatcttaaaatgtcattctagatatttcatcattttgttataattttttt---atactaaaattttgaaaaaa--tctttaagaaaaa 21647043  T
Q  576 gctatttcaaatagcttttcataaaattcatttttgaaagatttcattt 624  Q
     ||||||||||||||||||||||||| |||||||||||| || ||||||    
T  21647042 -ctatttcaaatagcttttcataaaaatcatttttgaaatatatcattt 21646995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 578 - 624
Target Start/End: Original strand, 33891762 - 33891808
Alignment:
Q  578 tatttcaaatagcttttcataaaattcatttttgaaagatttcattt 624  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||    
T  33891762 tatttcaaatagcttttcataaaaatcatttttgaaagatgtcattt 33891808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 451 - 552
Target Start/End: Complemental strand, 16751405 - 16751304
Alignment:
Q  451 aaggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaat 550  Q
    ||||||| |||| |||||||| || |||||||||| ||| |||||||||  ||| ||| |||||||||||||  ||||||| |  |||| ||||||||||    
T  16751405 aaggaaatcttcaaatgaaaaattcgtttgaataacttaacttaaaatgccattataattatttcatcatttggttataatttcttttgtatactaaaat 16751306  T
Q  551 tt 552  Q
    ||    
T  16751305 tt 16751304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 488 - 613
Target Start/End: Original strand, 5997897 - 5998021
Alignment:
Q  488 tatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaatttcgaacaaaattctctnnnnnnntgctatttcaaat 587  Q
    ||||||||||||| |||||||||||||||||||||| ||| || |   ||||||||||||| ||| ||| |||  |||          ||||||||||||    
T  5997897 tatcttaaaatgtcattctaagtatttcatcattttgttaaaaaaaaatttggatactaaatttt-gaaaaaatctctaaaaaaaaaagctatttcaaat 5997995  T
Q  588 agcttttcataaaattcatttttgaa 613  Q
    |||||||||||||| |||||||||||    
T  5997996 agcttttcataaaaatcatttttgaa 5998021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 487 - 531
Target Start/End: Complemental strand, 9621088 - 9621044
Alignment:
Q  487 ttatcttaaaatgttattctaagtatttcatcattttattataat 531  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||    
T  9621088 ttatcttaaaatgtcattctaaatatttcatcattttattataat 9621044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 451 - 523
Target Start/End: Complemental strand, 27330641 - 27330569
Alignment:
Q  451 aaggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcatttt 523  Q
    |||||||| ||| ||| |||| ||||||||||||  |||| ||||||||| ||||||||||||| ||||||||    
T  27330641 aaggaaagtttcaaattaaaaatttgtttgaatagcttattttaaaatgtcattctaagtattttatcatttt 27330569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 577 - 624
Target Start/End: Complemental strand, 21202532 - 21202485
Alignment:
Q  577 ctatttcaaatagcttttcataaaattcatttttgaaagatttcattt 624  Q
    ||||||||||||||||||||||||| | ||||||||||||| ||||||    
T  21202532 ctatttcaaatagcttttcataaaaataatttttgaaagatgtcattt 21202485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 578 - 624
Target Start/End: Original strand, 21200170 - 21200216
Alignment:
Q  578 tatttcaaatagcttttcataaaattcatttttgaaagatttcattt 624  Q
    |||||||||||||||||||||||| | ||||||||||||| ||||||    
T  21200170 tatttcaaatagcttttcataaaaataatttttgaaagatgtcattt 21200216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 578 - 624
Target Start/End: Original strand, 32493663 - 32493709
Alignment:
Q  578 tatttcaaatagcttttcataaaattcatttttgaaagatttcattt 624  Q
    |||||||||||||||||||||||| |||||||| |||||| ||||||    
T  32493663 tatttcaaatagcttttcataaaaatcatttttaaaagatgtcattt 32493709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 584 - 624
Target Start/End: Complemental strand, 7634705 - 7634665
Alignment:
Q  584 aaatagcttttcataaaattcatttttgaaagatttcattt 624  Q
    |||||||||||||||||| ||||||||||||||| ||||||    
T  7634705 aaatagcttttcataaaaatcatttttgaaagatgtcattt 7634665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 576 - 624
Target Start/End: Complemental strand, 27330519 - 27330471
Alignment:
Q  576 gctatttcaaatagcttttcataaaattcatttttgaaagatttcattt 624  Q
    |||||||||||||||||| ||||||| |||||||| |||||| ||||||    
T  27330519 gctatttcaaatagctttccataaaaatcatttttaaaagatgtcattt 27330471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 578 - 624
Target Start/End: Original strand, 3436512 - 3436558
Alignment:
Q  578 tatttcaaatagcttttcataaaattcatttttgaaagatttcattt 624  Q
    |||| ||||||| ||||||||||| ||||||||||||||| ||||||    
T  3436512 tattccaaatagtttttcataaaaatcatttttgaaagatgtcattt 3436558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 584 - 618
Target Start/End: Complemental strand, 16751285 - 16751251
Alignment:
Q  584 aaatagcttttcataaaattcatttttgaaagatt 618  Q
    |||||||||||||||||| ||||||||||||||||    
T  16751285 aaatagcttttcataaaaatcatttttgaaagatt 16751251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 486 - 531
Target Start/End: Complemental strand, 28176410 - 28176365
Alignment:
Q  486 tttatcttaaaatgttattctaagtatttcatcattttattataat 531  Q
    |||||||||||| || ||||||||||||| ||||||| ||||||||    
T  28176410 tttatcttaaaaagtcattctaagtattttatcatttgattataat 28176365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 4e-28; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 451 - 614
Target Start/End: Complemental strand, 394451 - 394290
Alignment:
Q  451 aaggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaat 550  Q
    |||||||||||| |||||||| | ||||||||||  |||||||||||||| |||||||||||||||||||||| ||||||| || |||||||||| ||||    
T  394451 aaggaaagcttcaaatgaaaaatctgtttgaatagcttatcttaaaatgtcattctaagtatttcatcattttgttataattttttttggatact-aaat 394353  T
Q  551 ttcgaacaaaattctct-nnnnnnntgctatttcaaatagcttttcataaaattcatttttgaaa 614  Q
    || ||  |||| |||||         |||||||||||||||||||||||||| ||||||||||||    
T  394352 tttga--aaaaatctctaaaaaaaaagctatttcaaatagcttttcataaaaatcatttttgaaa 394290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 451 - 624
Target Start/End: Original strand, 5841318 - 5841493
Alignment:
Q  451 aaggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaat 550  Q
    |||||||||||| |||||||| | |||||||||| ||||||||| ||| | |||||||||||||||||||||  ||||||  |  |||||||||||||||    
T  5841318 aaggaaagcttcaaatgaaaaatatgtttgaatagtttatcttagaatatcattctaagtatttcatcatttggttataaattattttggatactaaaat 5841417  T
Q  551 ttcgaacaaaattctct---nnnnnnntgctatttcaaatagcttttcataaaattcatttttgaaagatttcattt 624  Q
    || ||| |||| |||||           |||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  5841418 tttgaa-aaaaatctctaaaaaaaaaaagctatttcaaatagcttttcataaaaatcatttttgaaagatgtcattt 5841493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 452 - 624
Target Start/End: Complemental strand, 7861469 - 7861300
Alignment:
Q  452 aggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaatt 551  Q
    ||||||| ||| |||||||| ||  |||||||| ||||||||||||||| |||||||||||||||||| ||| ||||||| || ||| |||||| |||||    
T  7861469 aggaaagtttcaaatgaaaaattcatttgaatagtttatcttaaaatgtcattctaagtatttcatcagtttgttataattttttttagatact-aaatt 7861371  T
Q  552 tcgaacaaaattctctnnnnnnntgctatttcaaatagcttttcataaaattcatttttgaaagatttcattt 624  Q
    | ||  |||| |||||         ||||||||||||||||||||||||| |||||||||||| || ||||||    
T  7861370 ttga--aaaaatctctaaaaaaaaactatttcaaatagcttttcataaaaatcatttttgaaaaatatcattt 7861300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 454 - 624
Target Start/End: Original strand, 42522125 - 42522293
Alignment:
Q  454 gaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaatttc 553  Q
    |||||| || |||||||| || |||||||||  |||||||||||||| |||||||||||||||||||||||||||||| || || | |||| |||||||     
T  42522125 gaaagcatcaaatgaaaaattcgtttgaatagcttatcttaaaatgtcattctaagtatttcatcattttattataatttttttggaatac-aaaatttt 42522223  T
Q  554 gaacaaaattctctnnnnnnnt-gctatttcaaatagcttttcataaaattcatttttgaaagatttcattt 624  Q
    ||  |||| |||||       |  ||||||||||||||||||||||||| |||||||||||| || ||||||    
T  42522224 ga--aaaaatctctaaaaaaataactatttcaaatagcttttcataaaaatcatttttgaaaaatgtcattt 42522293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 451 - 548
Target Start/End: Complemental strand, 10378898 - 10378801
Alignment:
Q  451 aaggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaa 548  Q
    |||||||||||| || ||||| | |||||||||| ||||||||||||||| ||||||||||||||||| |||| ||||||  || |||||||||||||    
T  10378898 aaggaaagcttcaaacgaaaaatctgtttgaatagtttatcttaaaatgtcattctaagtatttcatcgttttgttataaatttttttggatactaaa 10378801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 451 - 552
Target Start/End: Complemental strand, 15834945 - 15834845
Alignment:
Q  451 aaggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaat 550  Q
    |||||||||||| ||| |||| || ||||||||| ||||||||||||||| ||||||  ||||| |||||||| ||||||| || |||||||||||||||    
T  15834945 aaggaaagcttcaaataaaaaattggtttgaatagtttatcttaaaatgtcattctagatattttatcattttgttataat-ttttttggatactaaaat 15834847  T
Q  551 tt 552  Q
    ||    
T  15834846 tt 15834845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 454 - 624
Target Start/End: Original strand, 865606 - 865772
Alignment:
Q  454 gaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaatttc 553  Q
    ||||| ||| |||||||| | | || ||||||||||||||||||||| ||||||||||||| |||||||  ||||||| || |||   |||||||||||     
T  865606 gaaagtttcaaatgaaaaatctcttggaataatttatcttaaaatgtcattctaagtattttatcatttggttataatttttttt---tactaaaatttt 865702  T
Q  554 gaacaaaattctctnnnnnnntgctatttcaaatagcttttcataaaattcatttttgaaagatttcattt 624  Q
    ||| |||  |||||         ||||||||||||| ||||||||||| | ||||||||||||| ||||||    
T  865703 gaa-aaatatctctaaaaaaaaactatttcaaatagtttttcataaaaattatttttgaaagatgtcattt 865772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 476 - 624
Target Start/End: Original strand, 36080597 - 36080743
Alignment:
Q  476 gtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaatttcgaacaaaattctctnnnnnnnt 575  Q
    |||||||||  |||||||||||| |  ||||||||||||||||||||| ||||||| || |||| |||||||||||| ||| ||||||  ||            
T  36080597 gtttgaatagcttatcttaaaatatcgttctaagtatttcatcattttgttataattttttttgaatactaaaattttgaa-aaaatt-gctagaaaaaa 36080694  T
Q  576 gctatttcaaatagcttttcataaaattcatttttgaaagatttcattt 624  Q
    |  ||||||||||||||||||||||| |||||||| |||||| ||||||    
T  36080695 gtcatttcaaatagcttttcataaaaatcattttttaaagatgtcattt 36080743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 451 - 624
Target Start/End: Original strand, 36977411 - 36977583
Alignment:
Q  451 aaggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaat 550  Q
    ||||||| |||| |||||||| | |||||||||| ||||| ||||||||| ||| |||||||||||||||||   |||||| || |||  ||||||||||    
T  36977411 aaggaaaacttcaaatgaaaaatatgtttgaatagtttattttaaaatgtcattttaagtatttcatcatttggctataatttttttt--atactaaaat 36977508  T
Q  551 ttcgaacaaaat-tctctnnnnnnntgctatttcaaatagcttttcataaaattcatttttgaaagatttcattt 624  Q
    || ||| ||||| ||           |||||||||||||| ||||| ||||| ||||||||||||||| ||||||    
T  36977509 tttgaaaaaaatctcaaaacaaaaaagctatttcaaatagtttttcttaaaaatcatttttgaaagatgtcattt 36977583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 454 - 624
Target Start/End: Complemental strand, 9771925 - 9771758
Alignment:
Q  454 gaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaatttc 553  Q
    ||||| ||| |||||||| |  ||||||||| ||||||||||||| ||||| ||||||||||||||||   ||||||| || |||  ||||||||||||     
T  9771925 gaaagtttcaaatgaaaaatccgtttgaatagtttatcttaaaatcttattataagtatttcatcattgggttataatttttttt--atactaaaatttt 9771828  T
Q  554 gaacaaaattctctnnnnnnntg-ctatttcaaatagcttttcataaaattcatttttgaaagatttcattt 624  Q
    ||| |||  |||||          ||||||||||||||||||||||||| |||| |||||||||| ||||||    
T  9771827 gaaaaaa--tctctaaaaaaaaaactatttcaaatagcttttcataaaaatcatctttgaaagatgtcattt 9771758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 454 - 531
Target Start/End: Original strand, 13146158 - 13146235
Alignment:
Q  454 gaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataat 531  Q
    ||||||||| ||| |||| |  ||||||||| ||||||||||||||| ||||||| |||||||||||||  |||||||    
T  13146158 gaaagcttcaaataaaaaatccgtttgaatagtttatcttaaaatgtcattctaaatatttcatcatttgcttataat 13146235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 577 - 617
Target Start/End: Original strand, 2068424 - 2068464
Alignment:
Q  577 ctatttcaaatagcttttcataaaattcatttttgaaagat 617  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  2068424 ctatttcaaatagcttttcataaaaatcatttttgaaagat 2068464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 459 - 523
Target Start/End: Complemental strand, 32270494 - 32270430
Alignment:
Q  459 cttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcatttt 523  Q
    |||| |||||||| ||||||||||||  |||||||||||||  ||| ||||||||||||||||||    
T  32270494 cttcaaatgaaaaatttgtttgaatatcttatcttaaaatgacattttaagtatttcatcatttt 32270430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 577 - 624
Target Start/End: Original strand, 6812692 - 6812739
Alignment:
Q  577 ctatttcaaatagcttttcataaaattcatttttgaaagatttcattt 624  Q
    ||||||||||||||||||||||||| |||||||||||| || ||||||    
T  6812692 ctatttcaaatagcttttcataaaaatcatttttgaaatatatcattt 6812739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 451 - 624
Target Start/End: Original strand, 35286012 - 35286185
Alignment:
Q  451 aaggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaat 550  Q
    ||||||| |||| |||||||| | |||||||||| ||| ||||||||| | ||||||| |||||||||| ||  ||||||| || |||  ||||||||||    
T  35286012 aaggaaaacttcaaatgaaaaatctgtttgaatagtttctcttaaaatatcattctaaatatttcatca-ttggttataat-ttttttttatactaaaat 35286109  T
Q  551 ttcgaacaaaattctct--nnnnnnntgctatttcaaatagcttttcataaaattcatttttgaaagatttcattt 624  Q
    ||  || |||| |||||          | |||||||||||||||||||||||| |||||||||||| || ||||||    
T  35286110 ttaaaaaaaaaatctctaaaagaaaaagttatttcaaatagcttttcataaaaatcatttttgaaatatgtcattt 35286185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 453 - 531
Target Start/End: Complemental strand, 25825148 - 25825070
Alignment:
Q  453 ggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataat 531  Q
    |||||||||| ||| |||| || |||||||||  |||||||||||||| |||||   |||||||||||||| |||||||    
T  25825148 ggaaagcttcaaataaaaaattggtttgaatagcttatcttaaaatgtgattctcgatatttcatcattttgttataat 25825070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 578 - 624
Target Start/End: Complemental strand, 32270389 - 32270343
Alignment:
Q  578 tatttcaaatagcttttcataaaattcatttttgaaagatttcattt 624  Q
    |||||||||||||||||||||||| | ||||||||||||| ||||||    
T  32270389 tatttcaaatagcttttcataaaaattatttttgaaagatgtcattt 32270343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 451 - 531
Target Start/End: Original strand, 12220208 - 12220286
Alignment:
Q  451 aaggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataat 531  Q
    ||||||| |||| |||||||| |  |||| |||| ||||||||||||| | |||||||||||||||||||||  |||||||    
T  12220208 aaggaaaacttcaaatgaaaaat--gtttaaatagtttatcttaaaatatcattctaagtatttcatcatttggttataat 12220286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 464 - 529
Target Start/End: Original strand, 43583509 - 43583574
Alignment:
Q  464 aatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattata 529  Q
    |||||||| || |||||||||| |||||| |||||||   |||||||||||||||||||| |||||    
T  43583509 aatgaaaaattcgtttgaataacttatctaaaaatgtctctctaagtatttcatcattttgttata 43583574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 576 - 624
Target Start/End: Complemental strand, 15936994 - 15936946
Alignment:
Q  576 gctatttcaaatagcttttcataaaattcatttttgaaagatttcattt 624  Q
    |||||||||||||||||| ||||||| |||||||||||| || ||||||    
T  15936994 gctatttcaaatagctttgcataaaaatcatttttgaaaaatgtcattt 15936946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 576 - 624
Target Start/End: Complemental strand, 25825027 - 25824979
Alignment:
Q  576 gctatttcaaatagcttttcataaaattcatttttgaaagatttcattt 624  Q
    |||||||||||||| ||||||||||| |||||||||||| || ||||||    
T  25825027 gctatttcaaatagtttttcataaaaatcatttttgaaatatatcattt 25824979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 578 - 624
Target Start/End: Original strand, 10192714 - 10192760
Alignment:
Q  578 tatttcaaatagcttttcataaaattcatttttgaaagatttcattt 624  Q
    ||||| |||||||||||||||||| | ||||||||||||| ||||||    
T  10192714 tatttaaaatagcttttcataaaaattatttttgaaagatgtcattt 10192760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 578 - 624
Target Start/End: Complemental strand, 26244444 - 26244398
Alignment:
Q  578 tatttcaaatagcttttcataaaattcatttttgaaagatttcattt 624  Q
    ||||||||||||||||| |||||| | ||||||||||||| ||||||    
T  26244444 tatttcaaatagctttttataaaaattatttttgaaagatgtcattt 26244398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 576 - 609
Target Start/End: Complemental strand, 10378778 - 10378745
Alignment:
Q  576 gctatttcaaatagcttttcataaaattcatttt 609  Q
    |||||||||||||||||||||||||| |||||||    
T  10378778 gctatttcaaatagcttttcataaaagtcatttt 10378745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 4e-28; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 451 - 624
Target Start/End: Original strand, 50679823 - 50679994
Alignment:
Q  451 aaggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaat 550  Q
    |||||||||||| |||||||| |||||||||||| ||||||||||||| | |||||||||||||||||||||  ||||||| || |||  ||||||||||    
T  50679823 aaggaaagcttcaaatgaaaaatttgtttgaatagtttatcttaaaatatcattctaagtatttcatcatttggttataat-ttttttttatactaaaat 50679921  T
Q  551 ttcgaacaaaattctctnnnnnnntgctatttcaaatagcttttcataaaattcatttttgaaagatttcattt 624  Q
    || ||| |||  ||| |        |||||||||||||||||||||||||| | ||||||||||||| ||||||    
T  50679922 tttgaaaaaatctct-taaaaaaaagctatttcaaatagcttttcataaaaattatttttgaaagatgtcattt 50679994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 453 - 531
Target Start/End: Complemental strand, 32156614 - 32156536
Alignment:
Q  453 ggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataat 531  Q
    |||||| ||| ||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  32156614 ggaaagtttcgaatgaaaattttgtttgtataatttatcttaaaatgtaattataagtatttcatcattttattataat 32156536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 455 - 552
Target Start/End: Complemental strand, 9686638 - 9686541
Alignment:
Q  455 aaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaattt 552  Q
    |||| ||| |||||||| | |||||||||| ||||||||||||||| ||||||||||||| |||||||| ||||||| || |||  ||||||||||||    
T  9686638 aaagtttcgaatgaaaaatatgtttgaatattttatcttaaaatgtaattctaagtattttatcattttgttataattttttttttatactaaaattt 9686541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 451 - 529
Target Start/End: Complemental strand, 25142336 - 25142258
Alignment:
Q  451 aaggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattata 529  Q
    ||||||| |||| |||||||| || |||||||||| |||| ||||||||| |||||||||||||||||||||| |||||    
T  25142336 aaggaaaacttcaaatgaaaaattcgtttgaataacttattttaaaatgtcattctaagtatttcatcattttgttata 25142258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 451 - 624
Target Start/End: Complemental strand, 42746818 - 42746648
Alignment:
Q  451 aaggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaat 550  Q
    |||||||| ||| | | ||||||| |||||||||| |||||||||||| | |||||||||||||||||||||| |  ||||||| |||  ||||||||||    
T  42746818 aaggaaagtttcaactaaaaatttcgtttgaataacttatcttaaaatataattctaagtatttcatcattttgt--taatatt-tttttatactaaaat 42746722  T
Q  551 ttcgaacaaaattctctnnnnnnntgctatttcaaatagcttttcataaaattcatttttgaaagatttcattt 624  Q
    || ||| |||   ||          |||||||||||||||||||||||||| ||||||||| ||||| ||||||    
T  42746721 tttgaaaaaatccctacaagaaaaagctatttcaaatagcttttcataaaaatcatttttggaagatgtcattt 42746648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 451 - 531
Target Start/End: Complemental strand, 24970123 - 24970043
Alignment:
Q  451 aaggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataat 531  Q
    |||||||| ||| |||||||| ||||||||||||  ||| |||||||||| |||||||||||||||||||||  |||||||    
T  24970123 aaggaaagtttcaaatgaaaaatttgtttgaatagcttaacttaaaatgtcattctaagtatttcatcatttggttataat 24970043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 477 - 548
Target Start/End: Complemental strand, 51717776 - 51717705
Alignment:
Q  477 tttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaa 548  Q
    ||||||||  |||||||||||||| |||||||||||||||||||||| ||||||| || |||||||| ||||    
T  51717776 tttgaatatcttatcttaaaatgtcattctaagtatttcatcattttgttataattttttttggatattaaa 51717705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 464 - 526
Target Start/End: Complemental strand, 24234940 - 24234878
Alignment:
Q  464 aatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttatt 526  Q
    |||||||| || |||||||||| |||||||||||||| ||| |||||||||||||||||||||    
T  24234940 aatgaaaaattcgtttgaataacttatcttaaaatgtcattttaagtatttcatcattttatt 24234878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 451 - 552
Target Start/End: Complemental strand, 35321634 - 35321535
Alignment:
Q  451 aaggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaat 550  Q
    |||||||| ||| |||||||| | |||||||||| ||||| ||||||||| ||||||| |||||||||||||  ||||||| || |||  ||||||||||    
T  35321634 aaggaaagtttcaaatgaaaaatctgtttgaatagtttatattaaaatgtcattctaaatatttcatcatttggttataatttttttt--atactaaaat 35321537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 452 - 530
Target Start/End: Complemental strand, 19300283 - 19300205
Alignment:
Q  452 aggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataa 530  Q
    |||||| |||| |||||||| |  ||||||||||||||||||||||| | ||||||||||||| || ||||| ||||||    
T  19300283 aggaaaacttcaaatgaaaaatcggtttgaataatttatcttaaaatctcattctaagtattttatgattttgttataa 19300205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 576 - 622
Target Start/End: Original strand, 49491935 - 49491981
Alignment:
Q  576 gctatttcaaatagcttttcataaaattcatttttgaaagatttcat 622  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||    
T  49491935 gctatttcaaatagcttttcataaaaatcatttttgaaagatgtcat 49491981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 576 - 624
Target Start/End: Complemental strand, 16304466 - 16304418
Alignment:
Q  576 gctatttcaaatagcttttcataaaattcatttttgaaagatttcattt 624  Q
    |||||||||||||| ||||||||||| ||||||||||||||| ||||||    
T  16304466 gctatttcaaatagtttttcataaaaatcatttttgaaagatgtcattt 16304418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 467 - 531
Target Start/End: Original strand, 49491827 - 49491891
Alignment:
Q  467 gaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataat 531  Q
    ||||||||||||||||||  ||||| |||||||| ||||||| ||| |||||||||| |||||||    
T  49491827 gaaaattttgtttgaatagcttatcgtaaaatgtcattctaaatatctcatcattttgttataat 49491891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 577 - 624
Target Start/End: Complemental strand, 49402502 - 49402455
Alignment:
Q  577 ctatttcaaatagcttttcataaaattcatttttgaaagatttcattt 624  Q
    |||||||||||||| |||||||||| ||||||||||||||| ||||||    
T  49402502 ctatttcaaatagcctttcataaaaatcatttttgaaagatgtcattt 49402455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 576 - 617
Target Start/End: Original strand, 16476387 - 16476428
Alignment:
Q  576 gctatttcaaatagcttttcataaaattcatttttgaaagat 617  Q
    ||||||||||||||||||||| |||| |||||||||||||||    
T  16476387 gctatttcaaatagcttttcaaaaaaatcatttttgaaagat 16476428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 451 - 523
Target Start/End: Original strand, 180479 - 180551
Alignment:
Q  451 aaggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcatttt 523  Q
    ||||||| |||| |||||||| || |||||| ||  |||||||||||| |  |||||||||||||||||||||    
T  180479 aaggaaaacttcaaatgaaaaattcgtttgagtaccttatcttaaaatatcgttctaagtatttcatcatttt 180551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 577 - 624
Target Start/End: Complemental strand, 25142233 - 25142186
Alignment:
Q  577 ctatttcaaatagcttttcataaaattcatttttgaaagatttcattt 624  Q
    |||||||||||| |||||||||||| |||||||| |||||| ||||||    
T  25142233 ctatttcaaataacttttcataaaaatcatttttaaaagatgtcattt 25142186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 505 - 552
Target Start/End: Original strand, 37874586 - 37874633
Alignment:
Q  505 ctaagtatttcatcattttattataatattctttggatactaaaattt 552  Q
    ||||||||||||||||||  ||||||| || |||||||||||||||||    
T  37874586 ctaagtatttcatcatttagttataattttttttggatactaaaattt 37874633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 579 - 624
Target Start/End: Complemental strand, 51717677 - 51717632
Alignment:
Q  579 atttcaaatagcttttcataaaattcatttttgaaagatttcattt 624  Q
    |||||||||| |||||||||||| |||||||||||| || ||||||    
T  51717677 atttcaaataacttttcataaaaatcatttttgaaaaatgtcattt 51717632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 6e-27; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 451 - 565
Target Start/End: Original strand, 12880296 - 12880410
Alignment:
Q  451 aaggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaat 550  Q
    |||||||| ||| |||||||| |||||||||||||||||||||||||||  ||||||||||| |||||||||| ||||||| || |||||||| ||||||    
T  12880296 aaggaaagtttcaaatgaaaaatttgtttgaataatttatcttaaaatgcaattctaagtatctcatcattttgttataattttttttggatattaaaat 12880395  T
Q  551 ttcgaacaaaattct 565  Q
    || ||| ||| ||||    
T  12880396 tttgaaaaaatttct 12880410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 451 - 552
Target Start/End: Complemental strand, 12628811 - 12628710
Alignment:
Q  451 aaggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaat 550  Q
    |||||||| ||  |||||||| |||||||||||| ||||||||||||||| ||| |||||||||||||||||| ||||||| || |||||||||||| ||    
T  12628811 aaggaaagttttaaatgaaaaatttgtttgaatagtttatcttaaaatgtaattttaagtatttcatcattttgttataattttttttggatactaagat 12628712  T
Q  551 tt 552  Q
    ||    
T  12628711 tt 12628710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 451 - 617
Target Start/End: Original strand, 25891884 - 25892054
Alignment:
Q  451 aaggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatat-tctttggatactaaaa 549  Q
    |||||||| ||||||| |||| | |||||||||| ||||||||||||||| ||||||||||||| |||||||| |||||| |  | ||||||||||||||    
T  25891884 aaggaaagtttctaataaaaaatctgtttgaatagtttatcttaaaatgtaattctaagtatttaatcattttgttataaaaaatttttggatactaaaa 25891983  T
Q  550 tttcgaacaaaattctctnnnnnnnt---gctatttcaaatagcttttcataaaattcatttttgaaagat 617  Q
    ||| ||| ||| ||||             | |||||||||||||||||||||||| |||||||||||||||    
T  25891984 ttttgaaaaaatttctaaaaaaaaaaaagggtatttcaaatagcttttcataaaaatcatttttgaaagat 25892054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 464 - 531
Target Start/End: Original strand, 46284126 - 46284193
Alignment:
Q  464 aatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataat 531  Q
    |||||||| ||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  46284126 aatgaaaaatttgtttaaataatttattttaaaatgttattctaaatatttcatcattttattataat 46284193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 454 - 552
Target Start/End: Original strand, 29152797 - 29152894
Alignment:
Q  454 gaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaattt 552  Q
    ||||||||| ||||||||||| ||||||||| |||| |||||||||| |||   |||||||||||||||| ||||||| || |||||||||||||||||    
T  29152797 gaaagcttcaaatgaaaatttcgtttgaatagtttaacttaaaatgtcatttctagtatttcatcattttgttataat-ttttttggatactaaaattt 29152894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 451 - 544
Target Start/End: Original strand, 6492375 - 6492467
Alignment:
Q  451 aaggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatac 544  Q
    |||||||||||  |||||||| ||||||||||||| |||||||||||||| ||| || ||||||||||||||| ||||||| || |||||||||    
T  6492375 aaggaaagcttaaaatgaaaaatttgtttgaataaattatcttaaaatgtcattttatgtatttcatcattttgttataat-ttttttggatac 6492467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 451 - 531
Target Start/End: Complemental strand, 15802143 - 15802063
Alignment:
Q  451 aaggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataat 531  Q
    |||||||||||| || ||||| |  |||||||||  |||||||||||||| |||||||||||||||||||||| |||||||    
T  15802143 aaggaaagcttcaaacgaaaaatccgtttgaatagcttatcttaaaatgtcattctaagtatttcatcattttgttataat 15802063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 451 - 531
Target Start/End: Original strand, 51161801 - 51161881
Alignment:
Q  451 aaggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataat 531  Q
    |||||||| ||| |||||||| |  ||||||||| || |||||||||||| ||||||||||||||||||||| ||||||||    
T  51161801 aaggaaagtttcaaatgaaaaatcagtttgaatagttgatcttaaaatgtcattctaagtatttcatcatttgattataat 51161881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 451 - 548
Target Start/End: Complemental strand, 10891552 - 10891454
Alignment:
Q  451 aaggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataa-tattctttggatactaaa 548  Q
    |||||||||||| |||||||| |  ||| ||| | ||||||||||||||| |||||||||||||||||||||  |||||| | || |||||||||||||    
T  10891552 aaggaaagcttcaaatgaaaaatccgttagaaaagtttatcttaaaatgtcattctaagtatttcatcatttggttataatttttttttggatactaaa 10891454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 451 - 552
Target Start/End: Complemental strand, 36700170 - 36700069
Alignment:
Q  451 aaggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaat 550  Q
    |||||||  ||| |||||||| |  |||| |||| ||||||||||||||| |||||||||||||||||||||  |||||||  | ||| |||||||||||    
T  36700170 aaggaaaaattcaaatgaaaaatccgtttaaatagtttatcttaaaatgtcattctaagtatttcatcatttggttataattatttttagatactaaaat 36700071  T
Q  551 tt 552  Q
    ||    
T  36700070 tt 36700069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 451 - 552
Target Start/End: Complemental strand, 36716274 - 36716173
Alignment:
Q  451 aaggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaat 550  Q
    |||||||  ||| |||||||| |  |||| |||| ||||||||||||||| |||||||||||||||||||||  |||||||  | ||| |||||||||||    
T  36716274 aaggaaaaattcaaatgaaaaatccgtttaaatagtttatcttaaaatgtcattctaagtatttcatcatttggttataattatttttagatactaaaat 36716175  T
Q  551 tt 552  Q
    ||    
T  36716174 tt 36716173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 451 - 523
Target Start/End: Original strand, 41811999 - 41812071
Alignment:
Q  451 aaggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcatttt 523  Q
    |||||||| ||| |||||||| |   ||||||||| |||||||||||||| ||||||||||||||||||||||    
T  41811999 aaggaaagtttcaaatgaaaaatccatttgaataacttatcttaaaatgtcattctaagtatttcatcatttt 41812071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 476 - 531
Target Start/End: Complemental strand, 33015344 - 33015289
Alignment:
Q  476 gtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataat 531  Q
    ||||||| || |||||||||||||| |||||||||||||||||||||| |||||||    
T  33015344 gtttgaacaacttatcttaaaatgtcattctaagtatttcatcattttgttataat 33015289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 477 - 531
Target Start/End: Original strand, 52042705 - 52042759
Alignment:
Q  477 tttgaataatttatcttaaaatgttattctaagtatttcatcattttattataat 531  Q
    ||||||||| |||||||||||||| |||||||| ||||||||||||| |||||||    
T  52042705 tttgaataacttatcttaaaatgtcattctaagcatttcatcattttgttataat 52042759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 451 - 552
Target Start/End: Complemental strand, 13573317 - 13573217
Alignment:
Q  451 aaggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaat 550  Q
    ||||||| |||| |||||||| |  ||||||| | ||| ||||||||||| |||||||||||||||  |||| ||| |||| ||||||  ||||||||||    
T  13573317 aaggaaatcttcaaatgaaaaatccgtttgaaaagtttgtcttaaaatgtcattctaagtatttcaaaatttgattgtaat-ttctttttatactaaaat 13573219  T
Q  551 tt 552  Q
    ||    
T  13573218 tt 13573217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 576 - 624
Target Start/End: Original strand, 6492501 - 6492549
Alignment:
Q  576 gctatttcaaatagcttttcataaaattcatttttgaaagatttcattt 624  Q
    |||||||||| ||||||||||||||| |||||| |||||||| ||||||    
T  6492501 gctatttcaattagcttttcataaaaatcatttatgaaagatgtcattt 6492549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 451 - 515
Target Start/End: Original strand, 11830742 - 11830806
Alignment:
Q  451 aaggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttc 515  Q
    |||||||||||| ||| |||| ||| ||||||||| |||| ||||||||| ||||||| ||||||    
T  11830742 aaggaaagcttcaaataaaaaatttatttgaataacttattttaaaatgtcattctaattatttc 11830806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 576 - 624
Target Start/End: Original strand, 23027016 - 23027064
Alignment:
Q  576 gctatttcaaatagcttttcataaaattcatttttgaaagatttcattt 624  Q
    |||||||||||||||||||||||||| |||||||| ||| || ||||||    
T  23027016 gctatttcaaatagcttttcataaaaatcatttttaaaatatgtcattt 23027064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 576 - 624
Target Start/End: Original strand, 41812121 - 41812169
Alignment:
Q  576 gctatttcaaatagcttttcataaaattcatttttgaaagatttcattt 624  Q
    ||||||| ||||||||||| |||||| |||||||||||| |||||||||    
T  41812121 gctatttgaaatagcttttaataaaaatcatttttgaaaaatttcattt 41812169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 576 - 624
Target Start/End: Original strand, 43413461 - 43413509
Alignment:
Q  576 gctatttcaaatagcttttcataaaattcatttttgaaagatttcattt 624  Q
    |||||||||||||| || |||||||| ||||||||||||||| ||||||    
T  43413461 gctatttcaaatagtttatcataaaaatcatttttgaaagatgtcattt 43413509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 577 - 620
Target Start/End: Original strand, 34898875 - 34898918
Alignment:
Q  577 ctatttcaaatagcttttcataaaattcatttttgaaagatttc 620  Q
    ||||||||||||||||||||||||| | |||||| |||||||||    
T  34898875 ctatttcaaatagcttttcataaaaattatttttaaaagatttc 34898918  T

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Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 576 - 614
Target Start/End: Complemental strand, 10891437 - 10891399
Alignment:
Q  576 gctatttcaaatagcttttcataaaattcatttttgaaa 614  Q
    |||||||||||||| ||||||||||| ||||||||||||    
T  10891437 gctatttcaaatagtttttcataaaaatcatttttgaaa 10891399  T

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Target: scaffold0027 (Bit Score: 61; Significance: 9e-26; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 451 - 624
Target Start/End: Original strand, 116659 - 116831
Alignment:
Q  451 aaggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaat 550  Q
    |||||||||||| |||||||| |   |||||||| ||||||||||||| | ||  |||||||||||||||||| ||||||| || |||| ||||||||||    
T  116659 aaggaaagcttcaaatgaaaaatccttttgaatagtttatcttaaaatatcatcttaagtatttcatcattttgttataattttttttgaatactaaaat 116758  T
Q  551 ttcgaacaaaattctctnnnnnnntgctatttcaaatagcttttcataaaattcatttttgaaagatttcattt 624  Q
    || ||| ||||||||||        ||||||||||||||||||| |||||| |||||||| ||| || ||||||    
T  116759 tttgaa-aaaattctctaaaaaaaagctatttcaaatagctttttataaaaatcatttttaaaaaatgtcattt 116831  T

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Target: scaffold0022 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 37 - 122
Target Start/End: Complemental strand, 162481 - 162396
Alignment:
Q  37 taagagggatttgtttaaagaatttgcagatcatcaagtgcgactgcacaagaagcttgcatttctggagggaagtgtatctgaaa 122  Q
    |||||||||||||||||  |||||||  |||||||||||||| |||||||||| |||||||||| ||||||||||| |||||||||    
T  162481 taagagggatttgtttacggaatttgttgatcatcaagtgcggctgcacaagatgcttgcatttttggagggaagtatatctgaaa 162396  T

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Target: scaffold1505 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold1505
Description:

Target: scaffold1505; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 451 - 523
Target Start/End: Complemental strand, 937 - 865
Alignment:
Q  451 aaggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgttattctaagtatttcatcatttt 523  Q
    |||||||| ||| |||||||| ||||||||||||| |||||||||||||| |||||||  |||||||||||||    
T  937 aaggaaagtttcaaatgaaaaatttgtttgaataacttatcttaaaatgtaattctaaaaatttcatcatttt 865  T

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Target: scaffold0024 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 475 - 552
Target Start/End: Complemental strand, 42280 - 42204
Alignment:
Q  475 tgtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaattt 552  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||  |||||| ||| ||| |||||| ||||||    
T  42280 tgtttgaatagtttatcttaaaatgtcattctaagtatttcatcatttggttataa-atttttttgatactcaaattt 42204  T

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Target: scaffold0006 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 476 - 562
Target Start/End: Complemental strand, 161033 - 160948
Alignment:
Q  476 gtttgaataatttatcttaaaatgttattctaagtatttcatcattttattataatattctttggatactaaaatttcgaacaaaat 562  Q
    ||||||||| ||| ||||||||| | |||||||||||||||| |||| ||| |||| ||||||  |||||||||||| ||| |||||    
T  161033 gtttgaatagtttgtcttaaaatatcattctaagtatttcataatttgattgtaat-ttctttttatactaaaattttgaaaaaaat 160948  T

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Target: scaffold0001 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 451 - 500
Target Start/End: Original strand, 183771 - 183820
Alignment:
Q  451 aaggaaagcttctaatgaaaattttgtttgaataatttatcttaaaatgt 500  Q
    |||||||| ||| |||||||| |  |||||||||||||||||||||||||    
T  183771 aaggaaagtttcaaatgaaaaatccgtttgaataatttatcttaaaatgt 183820  T

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