View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16831_low_2 (Length: 670)

Name: NF16831_low_2
Description: NF16831
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16831_low_2
NF16831_low_2
[»] chr3 (82 HSPs)
chr3 (205-661)||(6937524-6937976)
chr3 (74-210)||(6938506-6938642)
chr3 (247-350)||(2988523-2988626)
chr3 (247-353)||(51381861-51381967)
chr3 (247-353)||(54261552-54261658)
chr3 (262-354)||(2458158-2458250)
chr3 (247-353)||(20512406-20512512)
chr3 (262-353)||(33193940-33194031)
chr3 (247-353)||(54933115-54933221)
chr3 (262-353)||(41287405-41287496)
chr3 (262-353)||(45213631-45213722)
chr3 (262-353)||(47895253-47895344)
chr3 (262-353)||(51398160-51398251)
chr3 (295-353)||(44648322-44648380)
chr3 (262-355)||(53200588-53200681)
chr3 (247-355)||(25722369-25722477)
chr3 (262-358)||(35557657-35557753)
chr3 (262-354)||(41850531-41850623)
chr3 (247-350)||(43687796-43687899)
chr3 (19-97)||(6789276-6789354)
chr3 (295-353)||(31290886-31290944)
chr3 (247-353)||(32303815-32303921)
chr3 (19-104)||(6558723-6558808)
chr3 (54-138)||(6797044-6797128)
chr3 (262-353)||(23525225-23525316)
chr3 (262-355)||(3152714-3152807)
chr3 (49-138)||(6785573-6785662)
chr3 (262-343)||(36729691-36729772)
chr3 (247-348)||(43169471-43169572)
chr3 (262-347)||(44676371-44676456)
chr3 (86-138)||(6411003-6411055)
chr3 (317-353)||(25722623-25722659)
chr3 (262-354)||(30431270-30431361)
chr3 (317-353)||(42886704-42886740)
chr3 (256-343)||(36541637-36541724)
chr3 (262-353)||(38363941-38364032)
chr3 (255-346)||(44645484-44645575)
chr3 (295-354)||(45095713-45095772)
chr3 (262-353)||(47138115-47138206)
chr3 (295-353)||(40049057-40049115)
chr3 (299-353)||(52222762-52222816)
chr3 (161-211)||(6797236-6797288)
chr3 (320-353)||(6938223-6938256)
chr3 (320-353)||(30706667-30706700)
chr3 (321-353)||(2988776-2988808)
chr3 (157-210)||(6558854-6558909)
chr3 (19-55)||(6938648-6938684)
chr3 (317-353)||(20512658-20512694)
chr3 (320-352)||(36541446-36541478)
chr3 (317-353)||(42791282-42791318)
chr3 (296-348)||(42857008-42857060)
chr3 (317-353)||(43736783-43736819)
chr3 (317-353)||(54261370-54261406)
chr3 (295-354)||(25061876-25061935)
chr3 (322-353)||(41872195-41872226)
chr3 (317-352)||(42571689-42571724)
chr3 (295-338)||(42940161-42940204)
chr3 (263-353)||(51482086-51482177)
chr3 (295-353)||(647504-647562)
chr3 (295-353)||(4392078-4392136)
chr3 (295-353)||(16240750-16240808)
chr3 (263-353)||(33024210-33024299)
chr3 (295-353)||(38277935-38277993)
chr3 (291-353)||(42571449-42571511)
chr3 (295-353)||(42791479-42791537)
chr3 (319-353)||(44648565-44648599)
chr3 (300-353)||(19373773-19373826)
chr3 (320-353)||(32492341-32492374)
chr3 (320-353)||(43169289-43169322)
chr3 (296-345)||(43580663-43580712)
chr3 (296-353)||(44854497-44854554)
chr3 (321-353)||(647757-647789)
chr3 (317-353)||(2662639-2662675)
chr3 (317-353)||(19115342-19115378)
chr3 (317-353)||(25061660-25061696)
chr3 (321-353)||(27483349-27483381)
chr3 (317-353)||(30431075-30431111)
chr3 (317-353)||(38016330-38016366)
chr3 (319-347)||(41287037-41287065)
chr3 (317-353)||(41287658-41287694)
chr3 (317-353)||(43580430-43580466)
chr3 (319-355)||(50038333-50038369)
[»] chr8 (34 HSPs)
chr8 (205-353)||(11168776-11168924)
chr8 (247-355)||(34168122-34168230)
chr8 (262-353)||(39463407-39463498)
chr8 (247-353)||(8471393-8471499)
chr8 (262-353)||(4760471-4760562)
chr8 (255-353)||(34461494-34461592)
chr8 (262-348)||(9880418-9880504)
chr8 (295-353)||(38328967-38329025)
chr8 (300-356)||(4530054-4530110)
chr8 (247-338)||(18673026-18673117)
chr8 (247-346)||(27416637-27416736)
chr8 (262-353)||(43448866-43448957)
chr8 (301-353)||(9022584-9022636)
chr8 (295-355)||(36915547-36915607)
chr8 (295-346)||(32326644-32326695)
chr8 (262-356)||(17921107-17921201)
chr8 (319-353)||(35052425-35052459)
chr8 (264-341)||(4989630-4989707)
chr8 (317-353)||(8471235-8471271)
chr8 (317-353)||(15160609-15160645)
chr8 (262-342)||(31899171-31899251)
chr8 (317-353)||(34168369-34168405)
chr8 (317-353)||(39463213-39463249)
chr8 (317-353)||(39698828-39698864)
chr8 (262-346)||(40228724-40228808)
chr8 (326-357)||(9419982-9420013)
chr8 (262-353)||(43084539-43084630)
chr8 (296-335)||(45187226-45187265)
chr8 (291-353)||(396137-396199)
chr8 (319-353)||(37559698-37559732)
chr8 (291-353)||(39765783-39765845)
chr8 (262-343)||(39698588-39698669)
chr8 (317-353)||(18673261-18673297)
chr8 (317-353)||(22601090-22601126)
[»] chr5 (58 HSPs)
chr5 (205-353)||(15567006-15567154)
chr5 (262-356)||(42103972-42104066)
chr5 (295-360)||(166554-166619)
chr5 (262-353)||(26660904-26660995)
chr5 (262-353)||(26932497-26932588)
chr5 (262-357)||(39566333-39566428)
chr5 (247-346)||(42329463-42329562)
chr5 (262-355)||(21375560-21375653)
chr5 (262-353)||(2729698-2729789)
chr5 (247-346)||(27652238-27652337)
chr5 (262-353)||(42661852-42661943)
chr5 (262-336)||(42978002-42978076)
chr5 (262-355)||(29807224-29807317)
chr5 (262-353)||(34972562-34972653)
chr5 (255-353)||(29653424-29653522)
chr5 (247-353)||(33822413-33822519)
chr5 (295-353)||(36660608-36660666)
chr5 (296-353)||(7145032-7145089)
chr5 (533-589)||(4931882-4931938)
chr5 (263-346)||(14620412-14620496)
chr5 (249-353)||(36296044-36296148)
chr5 (247-338)||(793531-793622)
chr5 (247-350)||(4833551-4833654)
chr5 (262-353)||(8336319-8336410)
chr5 (262-353)||(27600544-27600635)
chr5 (262-353)||(34445941-34446030)
chr5 (295-353)||(4967403-4967461)
chr5 (295-353)||(14979963-14980021)
chr5 (295-353)||(34919918-34919976)
chr5 (262-344)||(39730096-39730178)
chr5 (300-353)||(36783543-36783596)
chr5 (319-355)||(166813-166849)
chr5 (291-359)||(10344849-10344917)
chr5 (317-353)||(10345096-10345132)
chr5 (295-351)||(21319242-21319298)
chr5 (295-355)||(21375479-21375539)
chr5 (262-353)||(14006042-14006133)
chr5 (296-351)||(24436454-24436509)
chr5 (295-353)||(4371533-4371591)
chr5 (319-353)||(4751697-4751731)
chr5 (295-353)||(31889902-31889960)
chr5 (319-353)||(32158527-32158561)
chr5 (291-356)||(4631098-4631163)
chr5 (320-353)||(4742433-4742466)
chr5 (300-353)||(12167522-12167575)
chr5 (262-342)||(3305932-3306012)
chr5 (317-353)||(42104227-42104263)
chr5 (295-346)||(38982073-38982124)
chr5 (319-353)||(15566452-15566486)
chr5 (295-353)||(43257773-43257830)
chr5 (541-597)||(1366844-1366900)
chr5 (321-353)||(2729953-2729985)
chr5 (295-343)||(4751452-4751500)
chr5 (293-353)||(11977768-11977828)
chr5 (317-353)||(21375813-21375849)
chr5 (317-353)||(29044700-29044736)
chr5 (317-353)||(36660382-36660418)
chr5 (546-594)||(36869563-36869611)
[»] chr7 (64 HSPs)
chr7 (205-353)||(36915462-36915610)
chr7 (247-353)||(19906549-19906655)
chr7 (262-353)||(1742141-1742232)
chr7 (247-353)||(32345746-32345852)
chr7 (263-353)||(45933499-45933589)
chr7 (247-353)||(6521954-6522060)
chr7 (247-350)||(39117403-39117506)
chr7 (247-353)||(26963616-26963722)
chr7 (262-353)||(7795153-7795244)
chr7 (262-353)||(29530845-29530936)
chr7 (262-353)||(37815874-37815965)
chr7 (289-353)||(42121719-42121783)
chr7 (247-354)||(19276527-19276633)
chr7 (262-353)||(27935917-27936008)
chr7 (262-353)||(48684873-48684964)
chr7 (295-353)||(22298184-22298242)
chr7 (295-353)||(40299021-40299079)
chr7 (265-346)||(16564720-16564801)
chr7 (265-346)||(16600861-16600942)
chr7 (262-355)||(35777969-35778062)
chr7 (261-353)||(27947411-27947503)
chr7 (262-338)||(42879859-42879935)
chr7 (262-353)||(23935571-23935662)
chr7 (262-353)||(44453283-44453374)
chr7 (317-355)||(18292286-18292324)
chr7 (317-359)||(19906362-19906404)
chr7 (255-353)||(36446981-36447079)
chr7 (262-354)||(23155371-23155463)
chr7 (262-353)||(10599513-10599604)
chr7 (247-353)||(10684741-10684847)
chr7 (319-353)||(36912062-36912096)
chr7 (299-353)||(40207299-40207353)
chr7 (295-353)||(42259461-42259519)
chr7 (320-353)||(6747180-6747213)
chr7 (318-354)||(1741945-1741981)
chr7 (303-355)||(30833005-30833057)
chr7 (317-353)||(40207540-40207576)
chr7 (317-353)||(40298802-40298838)
chr7 (321-353)||(42044146-42044178)
chr7 (317-348)||(2296997-2297028)
chr7 (262-353)||(13405037-13405128)
chr7 (317-356)||(32345999-32346038)
chr7 (295-346)||(33056203-33056254)
chr7 (291-353)||(715784-715846)
chr7 (291-353)||(6747394-6747456)
chr7 (317-355)||(12977847-12977885)
chr7 (291-353)||(18292503-18292565)
chr7 (317-355)||(22597183-22597221)
chr7 (319-353)||(27947665-27947699)
chr7 (319-353)||(40799945-40799979)
chr7 (320-354)||(44057764-44057798)
chr7 (296-353)||(5723170-5723227)
chr7 (295-352)||(17869420-17869477)
chr7 (320-353)||(19288513-19288546)
chr7 (319-360)||(25440819-25440859)
chr7 (295-352)||(36836255-36836312)
chr7 (300-353)||(42043897-42043950)
chr7 (291-351)||(12983067-12983127)
chr7 (317-353)||(18733408-18733444)
chr7 (317-353)||(26963434-26963470)
chr7 (320-348)||(36836019-36836047)
chr7 (317-353)||(40339413-40339449)
chr7 (293-353)||(40339639-40339699)
chr7 (317-353)||(43813507-43813543)
[»] chr1 (67 HSPs)
chr1 (262-359)||(49468615-49468712)
chr1 (247-353)||(2459140-2459246)
chr1 (247-353)||(22665071-22665177)
chr1 (247-355)||(11134370-11134478)
chr1 (247-354)||(28200133-28200240)
chr1 (262-353)||(32806848-32806939)
chr1 (255-348)||(254828-254921)
chr1 (262-355)||(9915594-9915687)
chr1 (262-353)||(5463725-5463816)
chr1 (249-356)||(50591227-50591334)
chr1 (249-347)||(26252256-26252354)
chr1 (262-348)||(48009160-48009246)
chr1 (247-353)||(49894916-49895022)
chr1 (249-350)||(42650164-42650265)
chr1 (296-353)||(48259775-48259832)
chr1 (255-355)||(5854134-5854234)
chr1 (262-353)||(10842930-10843021)
chr1 (262-353)||(49426329-49426420)
chr1 (247-341)||(672206-672300)
chr1 (295-353)||(28751320-28751378)
chr1 (295-353)||(24040936-24040994)
chr1 (262-356)||(31491677-31491771)
chr1 (262-356)||(46046123-46046217)
chr1 (295-353)||(48319917-48319975)
chr1 (295-353)||(50349769-50349827)
chr1 (296-353)||(84430-84487)
chr1 (255-344)||(44582699-44582788)
chr1 (302-350)||(43755216-43755264)
chr1 (262-353)||(15573763-15573854)
chr1 (296-343)||(17805766-17805813)
chr1 (262-353)||(44108751-44108842)
chr1 (262-353)||(48025164-48025255)
chr1 (295-353)||(4471319-4471377)
chr1 (295-353)||(12851914-12851972)
chr1 (262-352)||(15823184-15823274)
chr1 (295-345)||(17919741-17919791)
chr1 (247-340)||(9333214-9333307)
chr1 (247-340)||(9356987-9357080)
chr1 (300-353)||(13408246-13408299)
chr1 (317-353)||(2458962-2458998)
chr1 (295-347)||(6377204-6377256)
chr1 (317-353)||(7375243-7375279)
chr1 (317-353)||(27720913-27720949)
chr1 (261-349)||(38530753-38530841)
chr1 (318-353)||(32807100-32807135)
chr1 (262-353)||(35847846-35847937)
chr1 (262-353)||(43358124-43358215)
chr1 (531-577)||(5128267-5128313)
chr1 (295-353)||(15646985-15647043)
chr1 (319-353)||(17919985-17920019)
chr1 (262-344)||(25151960-25152042)
chr1 (296-346)||(30006313-30006363)
chr1 (319-353)||(34032243-34032277)
chr1 (530-596)||(39135063-39135129)
chr1 (319-353)||(43929638-43929672)
chr1 (319-353)||(44024499-44024533)
chr1 (319-353)||(44258672-44258706)
chr1 (295-353)||(45377071-45377129)
chr1 (317-355)||(50350020-50350058)
chr1 (320-353)||(50158230-50158263)
chr1 (317-353)||(17806537-17806573)
chr1 (317-353)||(25487043-25487079)
chr1 (317-353)||(31491931-31491967)
chr1 (297-353)||(33087512-33087568)
chr1 (317-349)||(38132329-38132361)
chr1 (262-338)||(40717287-40717363)
chr1 (317-353)||(50249264-50249300)
[»] chr4 (66 HSPs)
chr4 (262-358)||(52957701-52957797)
chr4 (247-353)||(47321278-47321384)
chr4 (262-354)||(37654560-37654652)
chr4 (247-353)||(28116378-28116484)
chr4 (247-353)||(34124428-34124534)
chr4 (247-346)||(45889696-45889795)
chr4 (263-353)||(39984968-39985058)
chr4 (262-343)||(27653824-27653905)
chr4 (262-353)||(2493252-2493343)
chr4 (262-353)||(2728314-2728405)
chr4 (262-353)||(18430139-18430230)
chr4 (247-346)||(19282330-19282429)
chr4 (255-350)||(54233957-54234052)
chr4 (247-353)||(6462147-6462253)
chr4 (247-353)||(55126630-55126736)
chr4 (262-346)||(29519448-29519532)
chr4 (262-353)||(19878798-19878889)
chr4 (247-346)||(24259744-24259843)
chr4 (262-353)||(40345263-40345354)
chr4 (255-353)||(17499630-17499728)
chr4 (262-352)||(49080394-49080484)
chr4 (262-355)||(1819712-1819805)
chr4 (262-355)||(52847968-52848061)
chr4 (296-353)||(56556194-56556251)
chr4 (262-346)||(40010795-40010879)
chr4 (263-355)||(50623235-50623327)
chr4 (295-354)||(30492899-30492958)
chr4 (278-353)||(34316386-34316461)
chr4 (262-353)||(53814413-53814504)
chr4 (262-353)||(56373491-56373582)
chr4 (531-589)||(17353605-17353663)
chr4 (295-353)||(29840234-29840292)
chr4 (261-338)||(49089612-49089689)
chr4 (317-353)||(31941758-31941794)
chr4 (262-354)||(41920224-41920316)
chr4 (247-355)||(51434168-51434276)
chr4 (245-344)||(4408099-4408198)
chr4 (546-597)||(24404213-24404264)
chr4 (262-349)||(24941030-24941117)
chr4 (262-353)||(38991679-38991770)
chr4 (262-353)||(42605722-42605813)
chr4 (262-353)||(45043504-45043595)
chr4 (319-353)||(4505291-4505325)
chr4 (262-355)||(20448189-20448280)
chr4 (289-346)||(32140798-32140855)
chr4 (320-353)||(50072458-50072491)
chr4 (295-346)||(21045312-21045361)
chr4 (317-353)||(47817690-47817726)
chr4 (291-358)||(4505504-4505571)
chr4 (262-350)||(29370753-29370837)
chr4 (319-354)||(37624510-37624545)
chr4 (263-353)||(54042098-54042189)
chr4 (300-347)||(56422920-56422967)
chr4 (291-353)||(7905923-7905985)
chr4 (295-353)||(22212520-22212578)
chr4 (319-353)||(49089415-49089449)
chr4 (317-346)||(28116203-28116232)
chr4 (317-353)||(29840026-29840062)
chr4 (295-355)||(31817112-31817172)
chr4 (317-353)||(31817339-31817375)
chr4 (321-353)||(32141132-32141164)
chr4 (255-351)||(34534008-34534104)
chr4 (321-353)||(44855449-44855481)
chr4 (317-353)||(52253799-52253835)
chr4 (317-353)||(52915709-52915745)
chr4 (319-347)||(56555873-56555901)
[»] chr2 (58 HSPs)
chr2 (242-354)||(38809828-38809940)
chr2 (262-353)||(4133172-4133263)
chr2 (247-353)||(14698124-14698230)
chr2 (247-353)||(25332706-25332812)
chr2 (247-353)||(43388569-43388675)
chr2 (262-353)||(441143-441234)
chr2 (262-353)||(25383397-25383488)
chr2 (262-353)||(29396592-29396683)
chr2 (262-355)||(29808963-29809056)
chr2 (249-353)||(4566033-4566137)
chr2 (263-355)||(16807427-16807519)
chr2 (263-355)||(16846708-16846800)
chr2 (247-338)||(39866597-39866689)
chr2 (262-353)||(42743178-42743267)
chr2 (530-597)||(30175518-30175585)
chr2 (296-346)||(7743584-7743634)
chr2 (531-597)||(21190926-21190992)
chr2 (262-355)||(30855255-30855348)
chr2 (529-659)||(36949224-36949352)
chr2 (262-346)||(42753897-42753981)
chr2 (262-353)||(12342243-12342334)
chr2 (295-346)||(34225932-34225983)
chr2 (249-347)||(775802-775900)
chr2 (543-597)||(45156347-45156401)
chr2 (262-353)||(8774202-8774293)
chr2 (262-353)||(8789342-8789433)
chr2 (262-353)||(18717226-18717317)
chr2 (317-355)||(17695987-17696025)
chr2 (262-348)||(32227928-32228014)
chr2 (317-355)||(34225726-34225764)
chr2 (295-353)||(40987194-40987252)
chr2 (263-344)||(10580777-10580858)
chr2 (262-339)||(38926756-38926833)
chr2 (321-353)||(1298946-1298978)
chr2 (317-353)||(4132978-4133014)
chr2 (317-353)||(4536528-4536564)
chr2 (549-597)||(25192772-25192820)
chr2 (295-358)||(4766124-4766187)
chr2 (278-353)||(36106315-36106390)
chr2 (291-353)||(681679-681741)
chr2 (319-353)||(14378387-14378421)
chr2 (319-353)||(18374929-18374963)
chr2 (319-353)||(27964538-27964572)
chr2 (319-353)||(37724201-37724235)
chr2 (295-353)||(40410625-40410683)
chr2 (291-353)||(42970067-42970129)
chr2 (321-355)||(45148121-45148155)
chr2 (319-352)||(776048-776081)
chr2 (320-353)||(1298692-1298725)
chr2 (296-353)||(14378160-14378217)
chr2 (320-353)||(29396846-29396879)
chr2 (321-354)||(34546497-34546530)
chr2 (301-353)||(44228654-44228707)
chr2 (317-353)||(441395-441431)
chr2 (293-353)||(17695748-17695808)
chr2 (317-353)||(38809567-38809603)
chr2 (317-353)||(43388819-43388855)
chr2 (291-347)||(43427217-43427273)
[»] scaffold0110 (1 HSPs)
scaffold0110 (262-353)||(24652-24743)
[»] scaffold0003 (1 HSPs)
scaffold0003 (247-342)||(321862-321957)
[»] scaffold0015 (1 HSPs)
scaffold0015 (262-353)||(20993-21084)
[»] chr6 (22 HSPs)
chr6 (262-353)||(1135075-1135166)
chr6 (262-353)||(10520302-10520393)
chr6 (247-353)||(17345050-17345152)
chr6 (247-346)||(25932765-25932864)
chr6 (297-353)||(31275553-31275609)
chr6 (247-338)||(6992537-6992628)
chr6 (278-353)||(29713318-29713393)
chr6 (317-355)||(19674934-19674972)
chr6 (262-344)||(19675128-19675210)
chr6 (317-353)||(17246768-17246804)
chr6 (247-335)||(26189645-26189733)
chr6 (543-594)||(20611516-20611567)
chr6 (263-353)||(24163625-24163716)
chr6 (295-353)||(234208-234266)
chr6 (321-355)||(26189460-26189494)
chr6 (319-353)||(29399900-29399934)
chr6 (300-354)||(32258900-32258954)
chr6 (291-353)||(32429455-32429517)
chr6 (262-351)||(23259239-23259328)
chr6 (317-353)||(1924826-1924862)
chr6 (321-353)||(9940602-9940634)
chr6 (317-353)||(29927162-29927198)
[»] scaffold0565 (1 HSPs)
scaffold0565 (295-353)||(9572-9630)
[»] scaffold0072 (1 HSPs)
scaffold0072 (295-353)||(11994-12052)
[»] scaffold0078 (1 HSPs)
scaffold0078 (265-354)||(1359-1448)
[»] scaffold0048 (1 HSPs)
scaffold0048 (262-339)||(62783-62860)
[»] scaffold0758 (1 HSPs)
scaffold0758 (266-353)||(6239-6326)
[»] scaffold0580 (4 HSPs)
scaffold0580 (295-353)||(1756-1814)
scaffold0580 (295-353)||(9495-9553)
scaffold0580 (317-353)||(1595-1631)
scaffold0580 (317-353)||(9334-9370)
[»] scaffold0047 (2 HSPs)
scaffold0047 (247-353)||(70365-70471)
scaffold0047 (317-353)||(70617-70653)
[»] scaffold0332 (1 HSPs)
scaffold0332 (319-353)||(3975-4009)


Alignment Details
Target: chr3 (Bit Score: 321; Significance: 0; HSPs: 82)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 321; E-Value: 0
Query Start/End: Original strand, 205 - 661
Target Start/End: Complemental strand, 6937976 - 6937524
Alignment:
Q  205 attcaatattggaacatgtgcctttctaattgattaaaaaatagtaaggctatttcagtaaaattgctatgatatttgactaaatgattgcattccttaa 304  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6937976 attcaatattggaacatgtgcctttttaattgattaaaaaatagtaaggctatttcagtaaaattgctatgatatttgactaaatgattgcattccttaa 6937877  T
Q  305 tctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagtagttaactgactatttgaatatttaccgcacaataatcagtttattaactga 404  Q
    ||  |||||||||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  6937876 tc--tgtgaaaatggctaaagcgacattcattttgaaacggagggagtagttaactgaccttttgaatatttaccgcacaataatcagtttattaactga 6937779  T
Q  405 aataannnnnnnnnnnnaccaacgcaaaattaattgatataattaatnnnnnnnttgttcaatacaaagcggataaatctcaaaagaccgatgacttgac 504  Q
    |||||            ||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||  |||| |||    
T  6937778 aataa--ttttttttttaccaacgcaaaattaattgatataattaataaaaaaattgttcaatacaaagcggataaatctcaaaagaccggcgactagac 6937681  T
Q  505 caagaacagaccgcccttgctaaagtcaggcccgacctttggggggtgcaaatagctcaatggagctgggccttcccaatgtatgggtctcatnnnnnnn 604  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           
T  6937680 caagaacagaccgcccttgctaaagtcaggcccgacctttggggggtgcaaatagctcaatggagctgggccttcccaatgtatgggtctcataaaaaaa 6937581  T
Q  605 nnttatagcccagttaataagtaataaatatagagatttacttttcccagcctatgc 661  Q
      ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  6937580 aattatagcccagttaacaagtaataaatatagagatttacttttcccaacctatgc 6937524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 74 - 210
Target Start/End: Complemental strand, 6938642 - 6938506
Alignment:
Q  74 ataagttcatatattaaacattgtaatttgactattctgatcacaatttcatttcataaatatattagatttcatgctggcaatctcttttggtaatata 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6938642 ataagttcatatattaaacattgtaatttgactattctgatcacaatttcatttcataaatatattagatttcatgctggcaatctcttttggtaatata 6938543  T
Q  174 aattgcatcacatcatcttccctatttttagattcaa 210  Q
    |||||||||||||||||||||||||||||||||||||    
T  6938542 aattgcatcacatcatcttccctatttttagattcaa 6938506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 247 - 350
Target Start/End: Complemental strand, 2988626 - 2988523
Alignment:
Q  247 agtaaggctatttcagtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacgga 346  Q
    ||||||| ||||| |||||||||||||||| |||||||||  | ||| ||||||||||||  |||| || ||||||||||||||||||||||||||||||    
T  2988626 agtaaggttattttagtaaaattgctatgacatttgactactttattccattccttaatccatgtgcaattggctaaagcgacactcattttgaaacgga 2988527  T
Q  347 ggga 350  Q
    ||||    
T  2988526 ggga 2988523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 247 - 353
Target Start/End: Original strand, 51381861 - 51381967
Alignment:
Q  247 agtaaggctatttcagtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacgga 346  Q
    ||||||| ||||| ||||||| ||||||||||||||||||  | ||| |||||||||||||||||| || || ||||||||||||||||||||||||| |    
T  51381861 agtaaggttattttagtaaaactgctatgatatttgactattttatttcattccttaatctgtgtgcaattgactaaagcgacactcattttgaaacgaa 51381960  T
Q  347 gggagta 353  Q
     ||||||    
T  51381961 tggagta 51381967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 247 - 353
Target Start/End: Original strand, 54261552 - 54261658
Alignment:
Q  247 agtaaggctatttcagtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacgga 346  Q
    ||||||| ||||| |||||||||| ||||| |||||||||  | |||  ||| ||||||||||||| || ||||||||||||||||||||||||||||||    
T  54261552 agtaaggttattttagtaaaattgttatgacatttgactactttattcaatttcttaatctgtgtgtaattggctaaagcgacactcattttgaaacgga 54261651  T
Q  347 gggagta 353  Q
    |||||||    
T  54261652 gggagta 54261658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 262 - 354
Target Start/End: Original strand, 2458158 - 2458250
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagtag 354  Q
    ||||||||||||||| |||| ||||  | ||||||||||||||| |||||| || ||||||||| ||||||||||||||||||||||||||||    
T  2458158 gtaaaattgctatgacattttactactttattgcattccttaatatgtgtgcaattggctaaagtgacactcattttgaaacggagggagtag 2458250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 247 - 353
Target Start/End: Complemental strand, 20512512 - 20512406
Alignment:
Q  247 agtaaggctatttcagtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacgga 346  Q
    ||||||| ||||| |||||||||||||||| |||||||||  | |||  ||| ||||||||||||| || || ||||||||||||||||||| |||||||    
T  20512512 agtaaggttattttagtaaaattgctatgacatttgactattttattcaatttcttaatctgtgtgcaattgactaaagcgacactcattttaaaacgga 20512413  T
Q  347 gggagta 353  Q
    |||||||    
T  20512412 gggagta 20512406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 262 - 353
Target Start/End: Complemental strand, 33194031 - 33193940
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||| ||||| |||||||||  | ||| |||||||||||||||||| || || |||||||||||||||||||||||| |||||||||    
T  33194031 gtaaaattgttatgacatttgactactttatttcattccttaatctgtgtgcaattgactaaagcgacactcattttgaaactgagggagta 33193940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 247 - 353
Target Start/End: Complemental strand, 54933221 - 54933115
Alignment:
Q  247 agtaaggctatttcagtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacgga 346  Q
    ||||||| ||||| |||||||||| ||||| |||||||||  | ||| ||||||||||| | |||| || |||||||||||||||||||||| |||||||    
T  54933221 agtaaggttattttagtaaaattgttatgacatttgactactttatttcattccttaatatatgtgcaattggctaaagcgacactcattttaaaacgga 54933122  T
Q  347 gggagta 353  Q
     ||||||    
T  54933121 tggagta 54933115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 262 - 353
Target Start/End: Complemental strand, 41287496 - 41287405
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||||||||| ||||||| |  | ||  || |||||||| |||||| || |||||||||||||||||||||||||||||||||||||    
T  41287496 gtaaaattgctatgacatttgaccactttatctcaatccttaatatgtgtgtaattggctaaagcgacactcattttgaaacggagggagta 41287405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 262 - 353
Target Start/End: Complemental strand, 45213722 - 45213631
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||||||||| |||||||||  | ||| ||||||||||| |||||| || |||||||||||||||||||||| |||  |||||||||    
T  45213722 gtaaaattgctatgacatttgactactttatttcattccttaatatgtgtgcaattggctaaagcgacactcattttaaaatagagggagta 45213631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 262 - 353
Target Start/End: Complemental strand, 47895344 - 47895253
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||||||||| || ||||||  | ||| ||||||||||| |||||| || |||||||||||||||||||||| ||||||||| ||||    
T  47895344 gtaaaattgctatgacatatgactactttatttcattccttaatatgtgtgcaattggctaaagcgacactcattttaaaacggaggaagta 47895253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 262 - 353
Target Start/End: Original strand, 51398160 - 51398251
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||| ||| | |||||| ||  | ||| |||| ||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  51398160 gtaaaattgttataacatttgattactttatttcatttcttaatctgtgtgcaattggctaaagcgacactcattttgaaacggagggagta 51398251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 295 - 353
Target Start/End: Complemental strand, 44648380 - 44648322
Alignment:
Q  295 cattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||    
T  44648380 cattccttaatctgtgtgcaattggctaaaacgacactcattttgaaacggagggagta 44648322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 262 - 355
Target Start/End: Complemental strand, 53200681 - 53200588
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagtagt 355  Q
    ||||||||||||||| |||||||||  | ||| ||||| ||||||| |||| || || |||||| | |||||||||||||||||||||||||||    
T  53200681 gtaaaattgctatgacatttgactactttatttcattctttaatctttgtgtaattgactaaagtggcactcattttgaaacggagggagtagt 53200588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 247 - 355
Target Start/End: Complemental strand, 25722477 - 25722369
Alignment:
Q  247 agtaaggctatttcagtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacgga 346  Q
    ||||||| ||||| |||||||||| ||||| |||||||||  | ||| |||| ||||||||||||| || |||||||| ||| ||| |||||||||| ||    
T  25722477 agtaaggttattttagtaaaattgttatgacatttgactactttattccatttcttaatctgtgtgcaattggctaaatcgatacttattttgaaacaga 25722378  T
Q  347 gggagtagt 355  Q
    | |||||||    
T  25722377 gagagtagt 25722369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 262 - 358
Target Start/End: Complemental strand, 35557753 - 35557657
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagtagttaa 358  Q
    ||||||||||||||| |||||| ||  | |||  |||| |||||||||||| ||||||||||| ||||| | |||||||||||||||||||| ||||    
T  35557753 gtaaaattgctatgacatttgattactttatttaattcattaatctgtgtgcaaatggctaaaacgacatttattttgaaacggagggagtatttaa 35557657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 262 - 354
Target Start/End: Original strand, 41850531 - 41850623
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagtag 354  Q
    ||||||||| ||||| |||||||||  | ||| ||||||||||| |||||| || | ||||||||| |||||||||||||||||| |||||||    
T  41850531 gtaaaattgttatgacatttgactactttatttcattccttaatatgtgtgcaattagctaaagcgccactcattttgaaacggatggagtag 41850623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 247 - 350
Target Start/End: Complemental strand, 43687899 - 43687796
Alignment:
Q  247 agtaaggctatttcagtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacgga 346  Q
    ||||||| ||||| |||||||||| ||||| |||||||||  | ||| ||||| |||||| ||||| || || ||||| ||||||| |||||||||||||    
T  43687899 agtaaggttattttagtaaaattgttatgacatttgactactttattccattcattaatccgtgtgcaattgactaaaacgacacttattttgaaacgga 43687800  T
Q  347 ggga 350  Q
    ||||    
T  43687799 ggga 43687796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 6789276 - 6789354
Alignment:
Q  19 ctgatcaaaaagccacaacagttcattggcgtatgttagctccaaagagtgtaggataagttcatatattaaacattgt 97  Q
    ||||||||||||||||||||||||||| | | |||||| ||| || |||| ||||||||| ||||||||||| ||||||    
T  6789276 ctgatcaaaaagccacaacagttcattagtgaatgttaactctaatgagtataggataagctcatatattaatcattgt 6789354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 295 - 353
Target Start/End: Complemental strand, 31290944 - 31290886
Alignment:
Q  295 cattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||||||||||||| || |||||||| ||||||||||||| ||||||||||||||    
T  31290944 cattccttaatctgtgtgtaattggctaaaacgacactcattttaaaacggagggagta 31290886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 247 - 353
Target Start/End: Complemental strand, 32303921 - 32303815
Alignment:
Q  247 agtaaggctatttcagtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacgga 346  Q
    ||||||| ||||| |||||||||||||||| |||||||||  | ||| |||||||||||||||||   | | | |||| |||||||||||||||| ||||    
T  32303921 agtaaggttattttagtaaaattgctatgacatttgactactttatttcattccttaatctgtgtacgattagttaaaacgacactcattttgaagcgga 32303822  T
Q  347 gggagta 353  Q
     ||||||    
T  32303821 tggagta 32303815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 6558723 - 6558808
Alignment:
Q  19 ctgatcaaaaagccacaacagttcattggcgtatgttagctccaaagagtgtaggataagttcatatattaaacattgtaatttga 104  Q
    ||||||||||||||||||  ||||||| | |||||||| |||||  | |||||||||||| ||||||||||| || ||||||||||    
T  6558723 ctgatcaaaaagccacaatggttcattagtgtatgttaactccagtgggtgtaggataagctcatatattaatcactgtaatttga 6558808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 54 - 138
Target Start/End: Original strand, 6797044 - 6797128
Alignment:
Q  54 ttagctccaaagagtgtaggataagttcatatattaaacattgtaatttgactattctgatcacaatttcatttcataaatatat 138  Q
    |||||| |||||| ||||||||||  |||||||||||  |||||||||||||||||| ||||| ||||| |||| || |||||||    
T  6797044 ttagctgcaaagactgtaggataaactcatatattaataattgtaatttgactattcagatcagaattttattttatgaatatat 6797128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 262 - 353
Target Start/End: Complemental strand, 23525316 - 23525225
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||| ||||| |||||||||  | ||| | ||||||||| |||||| || |||||||| |||||||||| |||||||||||| ||||    
T  23525316 gtaaaattgttatgacatttgactactttattcccttccttaatatgtgtgcaattggctaaaacgacactcatattgaaacggaggaagta 23525225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 262 - 355
Target Start/End: Complemental strand, 3152807 - 3152714
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagtagt 355  Q
    ||||||||| ||||| || ||||||  | ||| ||||||||||| |||||| || ||| |||| ||||||||||||| |||| |||||||||||    
T  3152807 gtaaaattgttatgacatctgactactttatttcattccttaatatgtgtgcaattggttaaaacgacactcattttaaaacagagggagtagt 3152714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 49 - 138
Target Start/End: Original strand, 6785573 - 6785662
Alignment:
Q  49 gtatgttagctccaaagagtgtaggataagttcatatattaaacattgtaatttgactattctgatcacaatttcatttcataaatatat 138  Q
    |||||||| ||||||||||||||||||||| ||||||||||| |||||  || | | ||||| || ||  |||||||||||| |||||||    
T  6785573 gtatgttaactccaaagagtgtaggataagctcatatattaatcattgcgatcttattattcagagcagcatttcatttcatgaatatat 6785662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 262 - 343
Target Start/End: Complemental strand, 36729772 - 36729691
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaac 343  Q
    ||||||||| |||||||||||||||  | ||| |||| |||||| |||||| || |||||||| |||| |||||||||||||    
T  36729772 gtaaaattgttatgatatttgactactttattccattacttaatatgtgtgcaattggctaaaacgacgctcattttgaaac 36729691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 247 - 348
Target Start/End: Original strand, 43169471 - 43169572
Alignment:
Q  247 agtaaggctatttcagtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacgga 346  Q
    ||||||| ||||| ||||||| ||| |||| |||||||||  | ||| ||||||||||||| |||| || || ||||| ||||||| ||||||||| |||    
T  43169471 agtaaggttattttagtaaaactgcaatgacatttgactactttatttcattccttaatctttgtgtaattgactaaaacgacactaattttgaaatgga 43169570  T
Q  347 gg 348  Q
    ||    
T  43169571 gg 43169572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 262 - 347
Target Start/End: Original strand, 44676371 - 44676456
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggag 347  Q
    ||||||||||||||| |||| ||||  | |||  |||||||||| |||||| || |||||||| | ||||||||||||||||||||    
T  44676371 gtaaaattgctatgacatttaactactttattctattccttaatatgtgtgtaattggctaaaacaacactcattttgaaacggag 44676456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 138
Target Start/End: Original strand, 6411003 - 6411055
Alignment:
Q  86 attaaacattgtaatttgactattctgatcacaatttcatttcataaatatat 138  Q
    ||||| ||||||||||||||||||| ||||| ||||||||||||| |||||||    
T  6411003 attaatcattgtaatttgactattcagatcagaatttcatttcatgaatatat 6411055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 317 - 353
Target Start/End: Original strand, 25722623 - 25722659
Alignment:
Q  317 tggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||||||||||||||||||||||||||||||||    
T  25722623 tggctaaagcgacactcattttgaaacggagggagta 25722659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 262 - 354
Target Start/End: Original strand, 30431270 - 30431361
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagtag 354  Q
    ||||||||| ||||| |||||||||  | ||| ||||||||||||| |||| || || |||||  |||||||||||| |||||||||||||||    
T  30431270 gtaaaattgttatgacatttgactactttatttcattccttaatctatgtgcaactg-ctaaaatgacactcattttaaaacggagggagtag 30431361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 317 - 353
Target Start/End: Complemental strand, 42886740 - 42886704
Alignment:
Q  317 tggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||||||||||||||||||||||||||||||||    
T  42886740 tggctaaagcgacactcattttgaaacggagggagta 42886704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 256 - 343
Target Start/End: Original strand, 36541637 - 36541724
Alignment:
Q  256 atttcagtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaac 343  Q
    |||| |||||||||||||| | |||||||||  | ||| ||||||||||| | |||| || ||| |||||||||||||||||| ||||    
T  36541637 attttagtaaaattgctataacatttgactattttatttcattccttaatatatgtgtaattggttaaagcgacactcattttaaaac 36541724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 262 - 353
Target Start/End: Original strand, 38363941 - 38364032
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||||||||| ||||||||   | ||| ||||  ||||||||| || || |||||||| ||||||||||||| |||||||| |||||    
T  38363941 gtaaaattgctatgacatttgactgctttattccattggttaatctgtatgcaattggctaaaacgacactcattttaaaacggagagagta 38364032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 255 - 346
Target Start/End: Original strand, 44645484 - 44645575
Alignment:
Q  255 tatttcagtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacgga 346  Q
    ||||| || |||||||||||||||||||||||  | ||| ||||| ||||| |||||| || | |||||| ||||| | |||||||||||||    
T  44645484 tattttagcaaaattgctatgatatttgactactttatttcattctttaatatgtgtgtaattagctaaaacgacatttattttgaaacgga 44645575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 295 - 354
Target Start/End: Original strand, 45095713 - 45095772
Alignment:
Q  295 cattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagtag 354  Q
    ||||||||||| || ||| || | |||||||||||| |||||||||||||||||||||||    
T  45095713 cattccttaatatgcgtgcaattagctaaagcgacaatcattttgaaacggagggagtag 45095772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 262 - 353
Target Start/End: Original strand, 47138115 - 47138206
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||||||||| |||||||||  | |||  |||  ||||| |||||| || || |||||| |||||||||||||||||||| ||||||    
T  47138115 gtaaaattgctatgacatttgactactttattcaattatttaatatgtgtgcaattgactaaagtgacactcattttgaaacggatggagta 47138206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 353
Target Start/End: Original strand, 40049057 - 40049115
Alignment:
Q  295 cattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||||||  ||||| |||| |||||||||||||| ||||| ||||||||||||||    
T  40049057 cattccttaattcgtgtgcaaatagctaaagcgacactaattttaaaacggagggagta 40049115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 299 - 353
Target Start/End: Complemental strand, 52222816 - 52222762
Alignment:
Q  299 ccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||| ||||| || |||||||| ||||||| ||||||||||||||||||||    
T  52222816 ccttaatccgtgtgcaattggctaaaacgacactaattttgaaacggagggagta 52222762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 211
Target Start/End: Original strand, 6797236 - 6797288
Alignment:
Q  161 ttttggtaatataaattgcatcacatca--tcttccctatttttagattcaat 211  Q
    ||||||||||||||||||||||||||||  | ||||||||||||| |||||||    
T  6797236 ttttggtaatataaattgcatcacatcaacttttccctatttttaaattcaat 6797288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 320 - 353
Target Start/End: Original strand, 6938223 - 6938256
Alignment:
Q  320 ctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||||||||||||||||||||||||||||    
T  6938223 ctaaagcgacactcattttgaaacggagggagta 6938256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 320 - 353
Target Start/End: Original strand, 30706667 - 30706700
Alignment:
Q  320 ctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||||||||||||||||||||||||||||    
T  30706667 ctaaagcgacactcattttgaaacggagggagta 30706700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 321 - 353
Target Start/End: Original strand, 2988776 - 2988808
Alignment:
Q  321 taaagcgacactcattttgaaacggagggagta 353  Q
    |||||||||||||||||||||||||||||||||    
T  2988776 taaagcgacactcattttgaaacggagggagta 2988808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 157 - 210
Target Start/End: Original strand, 6558854 - 6558909
Alignment:
Q  157 tctcttttggtaatataaattgcatcacatca--tcttccctatttttagattcaa 210  Q
    |||||||||||||||||||||||| |||||||  ||||||||| ||||| ||||||    
T  6558854 tctcttttggtaatataaattgcaacacatcatctcttccctagttttaaattcaa 6558909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 6938684 - 6938648
Alignment:
Q  19 ctgatcaaaaagccacaacagttcattggcgtatgtt 55  Q
    ||||||||||||||||||||||||||||||||| |||    
T  6938684 ctgatcaaaaagccacaacagttcattggcgtaagtt 6938648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 317 - 353
Target Start/End: Original strand, 20512658 - 20512694
Alignment:
Q  317 tggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||| ||||||||||||||||||||||||||||    
T  20512658 tggctaaaacgacactcattttgaaacggagggagta 20512694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 320 - 352
Target Start/End: Complemental strand, 36541478 - 36541446
Alignment:
Q  320 ctaaagcgacactcattttgaaacggagggagt 352  Q
    |||||||||||||||||||||||||||||||||    
T  36541478 ctaaagcgacactcattttgaaacggagggagt 36541446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 317 - 353
Target Start/End: Complemental strand, 42791318 - 42791282
Alignment:
Q  317 tggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||| |||||||||||||||||||||||||||    
T  42791318 tggctaaagtgacactcattttgaaacggagggagta 42791282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 296 - 348
Target Start/End: Complemental strand, 42857060 - 42857008
Alignment:
Q  296 attccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagg 348  Q
    ||||||||||||||||| || || ||||| ||||||||||||| |||||||||    
T  42857060 attccttaatctgtgtgtaattgcctaaaacgacactcattttaaaacggagg 42857008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 317 - 353
Target Start/End: Complemental strand, 43736819 - 43736783
Alignment:
Q  317 tggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||||||||||||||||||||||||| ||||||    
T  43736819 tggctaaagcgacactcattttgaaacggatggagta 43736783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 317 - 353
Target Start/End: Complemental strand, 54261406 - 54261370
Alignment:
Q  317 tggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||| ||||||||||||||||||||||||||||    
T  54261406 tggctaaaacgacactcattttgaaacggagggagta 54261370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 295 - 354
Target Start/End: Original strand, 25061876 - 25061935
Alignment:
Q  295 cattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagtag 354  Q
    ||||||||||| |||||| ||  ||||||| ||||||||||||| ||||||| |||||||    
T  25061876 cattccttaatatgtgtgcaatcggctaaaacgacactcatttttaaacggatggagtag 25061935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 322 - 353
Target Start/End: Original strand, 41872195 - 41872226
Alignment:
Q  322 aaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||||||||||||||||||||||||||    
T  41872195 aaagcgacactcattttgaaacggagggagta 41872226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 317 - 352
Target Start/End: Original strand, 42571689 - 42571724
Alignment:
Q  317 tggctaaagcgacactcattttgaaacggagggagt 352  Q
    ||||||||||||||||||||||||||||||| ||||    
T  42571689 tggctaaagcgacactcattttgaaacggagcgagt 42571724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 295 - 338
Target Start/End: Original strand, 42940161 - 42940204
Alignment:
Q  295 cattccttaatctgtgtgaaaatggctaaagcgacactcatttt 338  Q
    ||||||||| |||||||| || ||||||||||||||||||||||    
T  42940161 cattccttagtctgtgtgtaattggctaaagcgacactcatttt 42940204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 263 - 353
Target Start/End: Original strand, 51482086 - 51482177
Alignment:
Q  263 taaaattgcta-tgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||||| | |||||||||||  | ||| |||||||||||||||||| || ||  |||| ||||||||||||| |||| || ||||||    
T  51482086 taaaattgctactaatatttgactactttatttcattccttaatctgtgtgtaattgtttaaaacgacactcattttaaaacagaaggagta 51482177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 295 - 353
Target Start/End: Complemental strand, 647562 - 647504
Alignment:
Q  295 cattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||| ||||||||||||| || ||| |||| ||||||| |||||||||| |||||||||    
T  647562 catttcttaatctgtgtgcaattgggtaaaacgacacttattttgaaaccgagggagta 647504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 295 - 353
Target Start/End: Original strand, 4392078 - 4392136
Alignment:
Q  295 cattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||| |||||| ||| || || |||| ||| ||||||||||||||||||||||||||||    
T  4392078 catttcttaatttgtatgcaattggccaaaacgacactcattttgaaacggagggagta 4392136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 295 - 353
Target Start/End: Original strand, 16240750 - 16240808
Alignment:
Q  295 cattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||| |||| |||||| ||  ||||||| ||||||||||||||||||||| ||||||    
T  16240750 cattccctaatttgtgtgcaataggctaaaacgacactcattttgaaacggatggagta 16240808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 263 - 353
Target Start/End: Complemental strand, 33024299 - 33024210
Alignment:
Q  263 taaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||||| |||||| |||||  | |||  |||||||||| |||||| || |||||||| | | | ||||||||||||||||||||||    
T  33024299 taaaattgctacgatattcgactactttattcaattccttaatttgtgtgcaattggctaaaac-atattcattttgaaacggagggagta 33024210  T

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Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 295 - 353
Target Start/End: Original strand, 38277935 - 38277993
Alignment:
Q  295 cattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||||| || ||| || |||||||| ||||||||||||| ||| ||||||||||    
T  38277935 cattccttaatttgagtgcaattggctaaaacgacactcattttaaaatggagggagta 38277993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 291 - 353
Target Start/End: Complemental strand, 42571511 - 42571449
Alignment:
Q  291 attgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||| |||||| |||||| |||   ||||| || |||||||||||||||||||||||||    
T  42571511 attgcatttcttaatatgtgtgtaaagacctaaaacggcactcattttgaaacggagggagta 42571449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 295 - 353
Target Start/End: Original strand, 42791479 - 42791537
Alignment:
Q  295 cattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||||| || ||| || ||||||||  |||||||||||||||||||| ||||||    
T  42791479 cattccttaatatgcgtgcaattggctaaaatgacactcattttgaaacggatggagta 42791537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 319 - 353
Target Start/End: Original strand, 44648565 - 44648599
Alignment:
Q  319 gctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||| ||||||||||||||||||||||||||||    
T  44648565 gctaaaacgacactcattttgaaacggagggagta 44648599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 353
Target Start/End: Original strand, 19373773 - 19373826
Alignment:
Q  300 cttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||||||| || |||||||| ||||| ||||||||| ||||| ||||||    
T  19373773 cttaatctgtgtgcaattggctaaaacgacattcattttgagacggaaggagta 19373826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 353
Target Start/End: Original strand, 32492341 - 32492374
Alignment:
Q  320 ctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||| ||||||||||||||||||||||||||||    
T  32492341 ctaaaacgacactcattttgaaacggagggagta 32492374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 353
Target Start/End: Complemental strand, 43169322 - 43169289
Alignment:
Q  320 ctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||||||||||||| ||||||||||||||    
T  43169322 ctaaagcgacactcattttaaaacggagggagta 43169289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 345
Target Start/End: Original strand, 43580663 - 43580712
Alignment:
Q  296 attccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacgg 345  Q
    ||||||||||||||||| || ||||||||||| | |||||||| ||||||    
T  43580663 attccttaatctgtgtgcaattggctaaagcgtcgctcattttaaaacgg 43580712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 353
Target Start/End: Original strand, 44854497 - 44854554
Alignment:
Q  296 attccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||| ||||||| |||| || |||||||| ||||| ||||||||||||||| ||||||    
T  44854497 attcattaatctatgtgcaattggctaaaacgacaatcattttgaaacggatggagta 44854554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 321 - 353
Target Start/End: Original strand, 647757 - 647789
Alignment:
Q  321 taaagcgacactcattttgaaacggagggagta 353  Q
    ||||| |||||||||||||||||||||||||||    
T  647757 taaagtgacactcattttgaaacggagggagta 647789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 317 - 353
Target Start/End: Original strand, 2662639 - 2662675
Alignment:
Q  317 tggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||||||||||||||||| |||||||| |||||    
T  2662639 tggctaaagcgacactcattttaaaacggagcgagta 2662675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 317 - 353
Target Start/End: Complemental strand, 19115378 - 19115342
Alignment:
Q  317 tggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||||||| |||||||| ||||||||||||||    
T  19115378 tggctaaagcgacgctcattttaaaacggagggagta 19115342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 317 - 353
Target Start/End: Complemental strand, 25061696 - 25061660
Alignment:
Q  317 tggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||| |||||||||||||||||||| ||||||    
T  25061696 tggctaaagtgacactcattttgaaacggaaggagta 25061660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 321 - 353
Target Start/End: Original strand, 27483349 - 27483381
Alignment:
Q  321 taaagcgacactcattttgaaacggagggagta 353  Q
    |||||||||||||||||||||||||| ||||||    
T  27483349 taaagcgacactcattttgaaacggaaggagta 27483381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 317 - 353
Target Start/End: Complemental strand, 30431111 - 30431075
Alignment:
Q  317 tggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||| |||||||||||||||||| |||||||||    
T  30431111 tggctaaaacgacactcattttgaaacagagggagta 30431075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 317 - 353
Target Start/End: Complemental strand, 38016366 - 38016330
Alignment:
Q  317 tggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||| ||||||||||||||||||||| ||||||    
T  38016366 tggctaaaacgacactcattttgaaacggatggagta 38016330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 319 - 347
Target Start/End: Complemental strand, 41287065 - 41287037
Alignment:
Q  319 gctaaagcgacactcattttgaaacggag 347  Q
    |||||||||||||||||||||||||||||    
T  41287065 gctaaagcgacactcattttgaaacggag 41287037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 317 - 353
Target Start/End: Original strand, 41287658 - 41287694
Alignment:
Q  317 tggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||| ||||||| ||||||||||||||||||||    
T  41287658 tggctaaaacgacacttattttgaaacggagggagta 41287694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 317 - 353
Target Start/End: Complemental strand, 43580466 - 43580430
Alignment:
Q  317 tggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||||||| |||||||||||||||||| ||||    
T  43580466 tggctaaagcgacgctcattttgaaacggaggaagta 43580430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 319 - 355
Target Start/End: Original strand, 50038333 - 50038369
Alignment:
Q  319 gctaaagcgacactcattttgaaacggagggagtagt 355  Q
    |||||||||||||||||||| |||||||| |||||||    
T  50038333 gctaaagcgacactcattttaaaacggagagagtagt 50038369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 145; Significance: 6e-76; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 145; E-Value: 6e-76
Query Start/End: Original strand, 205 - 353
Target Start/End: Original strand, 11168776 - 11168924
Alignment:
Q  205 attcaatattggaacatgtgcctttctaattgattaaaaaatagtaaggctatttcagtaaaattgctatgatatttgactaaatgattgcattccttaa 304  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11168776 attcaatattggaacctgtgcctttctaattgattaaaaaatagtaaggctatttcagtaaaattgctatgatatttgactaaatgattgcattccttaa 11168875  T
Q  305 tctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  11168876 tctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 11168924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 247 - 355
Target Start/End: Complemental strand, 34168230 - 34168122
Alignment:
Q  247 agtaaggctatttcagtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacgga 346  Q
    ||||||| ||||| |||||||||||||||| |||||||||  | |||  ||||||||||| ||||| || ||||||||||||||||||||||||||||||    
T  34168230 agtaaggttattttagtaaaattgctatgacatttgactactttattcaattccttaatccgtgtgtaattggctaaagcgacactcattttgaaacgga 34168131  T
Q  347 gggagtagt 355  Q
    |||||||||    
T  34168130 gggagtagt 34168122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 262 - 353
Target Start/End: Original strand, 39463407 - 39463498
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||||||| || |||||||||  | ||| ||||||||||| |||||| || |||||||||||||||||||||||||||||||||||||    
T  39463407 gtaaaattgctacgacatttgactactttattccattccttaatatgtgtgcaattggctaaagcgacactcattttgaaacggagggagta 39463498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 247 - 353
Target Start/End: Original strand, 8471393 - 8471499
Alignment:
Q  247 agtaaggctatttcagtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacgga 346  Q
    ||||||| ||||| |||||||||| ||||| |||||||||  | ||| |||| |||||||| |||| || |||||||||||||||||||||||||||| |    
T  8471393 agtaaggttattttagtaaaattggtatgacatttgactactttatttcatttcttaatctatgtgcaattggctaaagcgacactcattttgaaacgaa 8471492  T
Q  347 gggagta 353  Q
    |||||||    
T  8471493 gggagta 8471499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 262 - 353
Target Start/End: Complemental strand, 4760562 - 4760471
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||||||||| |||||||||  | ||| ||||||||||||| |||| || |||||||||||||||||||||| ||||||| ||||||    
T  4760562 gtaaaattgctatgacatttgactactttatttcattccttaatctatgtgcaattggctaaagcgacactcattttaaaacggatggagta 4760471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 255 - 353
Target Start/End: Complemental strand, 34461592 - 34461494
Alignment:
Q  255 tatttcagtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||| |||||||||| ||||| |||||||||  | ||| |||||||||||||||||  || |||||||||||||||||||||||||||| | ||||||    
T  34461592 tattttagtaaaattgttatgacatttgactattttatttcattccttaatctgtgtacaattggctaaagcgacactcattttgaaacgtaaggagta 34461494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 262 - 348
Target Start/End: Complemental strand, 9880504 - 9880418
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagg 348  Q
    ||||||||||||||| ||||||| |  | ||| |||| ||||||||||||| || ||| ||||||||||||||||||||||||||||    
T  9880504 gtaaaattgctatgacatttgaccactttattccatttcttaatctgtgtgcaattggttaaagcgacactcattttgaaacggagg 9880418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 295 - 353
Target Start/End: Complemental strand, 38329025 - 38328967
Alignment:
Q  295 cattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||||||||||||| || || ||||||||| ||||||||||||||||||||||||    
T  38329025 cattccttaatctgtgtgcaattgactaaagcgaaactcattttgaaacggagggagta 38328967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 300 - 356
Target Start/End: Original strand, 4530054 - 4530110
Alignment:
Q  300 cttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagtagtt 356  Q
    ||||||||||||| || |||||||| ||||||||||||||||||||| |||||||||    
T  4530054 cttaatctgtgtgcaattggctaaaacgacactcattttgaaacggatggagtagtt 4530110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 247 - 338
Target Start/End: Complemental strand, 18673117 - 18673026
Alignment:
Q  247 agtaaggctatttcagtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcatttt 338  Q
    ||||||| ||||| |||||||||| ||||| |||||||||  | ||| |||| |||||| |||||| || |||||| |||||||||||||||    
T  18673117 agtaaggttattttagtaaaattgttatgacatttgactactttatttcatttcttaatttgtgtgtaattggctagagcgacactcatttt 18673026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 247 - 346
Target Start/End: Original strand, 27416637 - 27416736
Alignment:
Q  247 agtaaggctatttcagtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacgga 346  Q
    ||||||| ||||| |||||||||||||||| |||||||||  | |||  ||||||||||||| ||| || || || |||||||||||||||  |||||||    
T  27416637 agtaaggttattttagtaaaattgctatgacatttgactactttattatattccttaatctgcgtgcaattgactgaagcgacactcatttaaaaacgga 27416736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 262 - 353
Target Start/End: Original strand, 43448866 - 43448957
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||| ||||| |||||||||  | ||| ||||| ||||| |||||| || || |||||||||||| |||||||||||||| ||||||    
T  43448866 gtaaaattgatatgacatttgactactttatttcattcattaatatgtgtgtaattgactaaagcgacacccattttgaaacggatggagta 43448957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 301 - 353
Target Start/End: Original strand, 9022584 - 9022636
Alignment:
Q  301 ttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||||||| || |||||||| ||||||||||||| ||||||||||||||    
T  9022584 ttaatctgtgtgcaattggctaaaacgacactcattttaaaacggagggagta 9022636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 295 - 355
Target Start/End: Original strand, 36915547 - 36915607
Alignment:
Q  295 cattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagtagt 355  Q
    ||||||||||||||| || || ||| |||| ||||||||||||| ||||||||||||||||    
T  36915547 cattccttaatctgtatgcaattggttaaaacgacactcattttaaaacggagggagtagt 36915607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 295 - 346
Target Start/End: Complemental strand, 32326695 - 32326644
Alignment:
Q  295 cattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacgga 346  Q
    |||||||||||||||||| || || ||||||||||||||||||| |||||||    
T  32326695 cattccttaatctgtgtgcaattgactaaagcgacactcattttaaaacgga 32326644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 262 - 356
Target Start/End: Original strand, 17921107 - 17921201
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagtagtt 356  Q
    ||||||||||||||| |||||||||  | |||  |||||||||| |||||| || ||||| |||| ||| | |||||||||||||| | ||||||    
T  17921107 gtaaaattgctatgacatttgactattttattcaattccttaatatgtgtgcaattggcttaagcaacattaattttgaaacggagcgggtagtt 17921201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 353
Target Start/End: Complemental strand, 35052459 - 35052425
Alignment:
Q  319 gctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||||||||||||||||||||||||||||||    
T  35052459 gctaaagcgacactcattttgaaacggagggagta 35052425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 264 - 341
Target Start/End: Original strand, 4989630 - 4989707
Alignment:
Q  264 aaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaa 341  Q
    |||||||||||||||||||||||  | ||| ||||| ||||| ||| || || ||| |||||||| ||||||||||||    
T  4989630 aaaattgctatgatatttgactactttattccattctttaatatgtatgcaattggttaaagcgaaactcattttgaa 4989707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 317 - 353
Target Start/End: Complemental strand, 8471271 - 8471235
Alignment:
Q  317 tggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||||| |||||||||||||||||||||||||    
T  8471271 tggctaaagcggcactcattttgaaacggagggagta 8471235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 317 - 353
Target Start/End: Original strand, 15160609 - 15160645
Alignment:
Q  317 tggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||||||||||||||||||||||||| |||||    
T  15160609 tggctaaagcgacactcattttgaaacggagtgagta 15160645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 262 - 342
Target Start/End: Complemental strand, 31899251 - 31899171
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaa 342  Q
    ||||||||| ||||| ||| ||| |  | ||| ||||||||||| | |||| || ||||||||||||||||||||||||||    
T  31899251 gtaaaattgttatgacattcgacaactttatttcattccttaatatatgtgcaattggctaaagcgacactcattttgaaa 31899171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 317 - 353
Target Start/End: Original strand, 34168369 - 34168405
Alignment:
Q  317 tggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||| ||||||||||||||||||||||||||||    
T  34168369 tggctaaaacgacactcattttgaaacggagggagta 34168405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 317 - 353
Target Start/End: Complemental strand, 39463249 - 39463213
Alignment:
Q  317 tggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||| ||||||||||||||||||||||||||||    
T  39463249 tggctaaaacgacactcattttgaaacggagggagta 39463213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 317 - 353
Target Start/End: Original strand, 39698828 - 39698864
Alignment:
Q  317 tggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||| ||||||||||||||||||||||||||||    
T  39698828 tggctaaaacgacactcattttgaaacggagggagta 39698864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 262 - 346
Target Start/End: Original strand, 40228724 - 40228808
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacgga 346  Q
    ||||||||| ||||| |||||||||  | ||| ||||||||||| | |||| || || |||||  ||||||||||||||||||||    
T  40228724 gtaaaattgttatgacatttgactactttatttcattccttaatatatgtgcaattgactaaaatgacactcattttgaaacgga 40228808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 326 - 357
Target Start/End: Complemental strand, 9420013 - 9419982
Alignment:
Q  326 cgacactcattttgaaacggagggagtagtta 357  Q
    ||||||||||||||||||||||||||||||||    
T  9420013 cgacactcattttgaaacggagggagtagtta 9419982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 262 - 353
Target Start/End: Complemental strand, 43084630 - 43084539
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||| |||||| |||||||||  | ||| ||||||||||| |||||| || || |||||| |||||| ||||| ||| |||| |||||    
T  43084630 gtaaaattactatgacatttgactactttatttcattccttaatatgtgtgcaattgactaaagtgacacttattttaaaatggagagagta 43084539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 296 - 335
Target Start/End: Complemental strand, 45187265 - 45187226
Alignment:
Q  296 attccttaatctgtgtgaaaatggctaaagcgacactcat 335  Q
    ||||||||||||||||| || |||||||||||||||||||    
T  45187265 attccttaatctgtgtgcaattggctaaagcgacactcat 45187226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 291 - 353
Target Start/End: Complemental strand, 396199 - 396137
Alignment:
Q  291 attgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||| |||||| |||||| |||   ||||| ||||||||||||||||||||| ||||||    
T  396199 attgcatttcttaatatgtgtgtaaagacctaaaacgacactcattttgaaacggatggagta 396137  T

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Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 319 - 353
Target Start/End: Original strand, 37559698 - 37559732
Alignment:
Q  319 gctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||||||||||||||||||||||| ||||||    
T  37559698 gctaaagcgacactcattttgaaacggatggagta 37559732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 291 - 353
Target Start/End: Complemental strand, 39765845 - 39765783
Alignment:
Q  291 attgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||| ||| |||||| |||||| |||   ||||| ||||||||||||||||||||||||||||    
T  39765845 attgtatttcttaatatgtgtgtaaacacctaaaacgacactcattttgaaacggagggagta 39765783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 262 - 343
Target Start/End: Complemental strand, 39698669 - 39698588
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaac 343  Q
    ||||||||||||| | |||||||||  | ||| ||| ||||||| |||||| || || |||||| |||||||||||| ||||    
T  39698669 gtaaaattgctataacatttgactactttatttcataccttaatatgtgtgcaattgcctaaagagacactcattttaaaac 39698588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 317 - 353
Target Start/End: Original strand, 18673261 - 18673297
Alignment:
Q  317 tggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||| ||||||||||||||||||||| ||||||    
T  18673261 tggctaaaacgacactcattttgaaacggatggagta 18673297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 317 - 353
Target Start/End: Complemental strand, 22601126 - 22601090
Alignment:
Q  317 tggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||| ||||||||| |||||||||||||||||    
T  22601126 tggctaaagtgacactcatcttgaaacggagggagta 22601090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 145; Significance: 6e-76; HSPs: 58)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 145; E-Value: 6e-76
Query Start/End: Original strand, 205 - 353
Target Start/End: Original strand, 15567006 - 15567154
Alignment:
Q  205 attcaatattggaacatgtgcctttctaattgattaaaaaatagtaaggctatttcagtaaaattgctatgatatttgactaaatgattgcattccttaa 304  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15567006 attcaatattggaacatgtgcctttctaattgattaaaaaatagtaaggctatttcagtaaaattgctatgatatttgactaaatgattgcattccttaa 15567105  T
Q  305 tctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  15567106 tctgtgtgaaaatggctaaagcgacactcattttgaaatggagggagta 15567154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 262 - 356
Target Start/End: Complemental strand, 42104066 - 42103972
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagtagtt 356  Q
    ||||||||||||||| |||||||||  | ||| ||||||||||| |||||| || ||||||||||||||||||||||||||||||||||||||||    
T  42104066 gtaaaattgctatgacatttgactactttattccattccttaatatgtgtgcaattggctaaagcgacactcattttgaaacggagggagtagtt 42103972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 295 - 360
Target Start/End: Complemental strand, 166619 - 166554
Alignment:
Q  295 cattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagtagttaact 360  Q
    |||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||||||||||    
T  166619 cattccttaatctgtgtgcaattggctaacgcgacactcattttgaaacggagggagtagttaact 166554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 262 - 353
Target Start/End: Original strand, 26660904 - 26660995
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||||||||| ||||||| |  | ||| ||||||||||| |||||| || |||||||||||||||||||||| ||||||||||||||    
T  26660904 gtaaaattgctatgacatttgacaactttatttcattccttaatatgtgtgcaattggctaaagcgacactcattttaaaacggagggagta 26660995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 262 - 353
Target Start/End: Original strand, 26932497 - 26932588
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||||||||| ||||||| |  | ||| ||||||||||| |||||| || |||||||||||||||||||||| ||||||||||||||    
T  26932497 gtaaaattgctatgacatttgacaactttatttcattccttaatatgtgtgcaattggctaaagcgacactcattttaaaacggagggagta 26932588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 262 - 357
Target Start/End: Original strand, 39566333 - 39566428
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagtagtta 357  Q
    ||||||||| ||||| |||||||||  | ||| ||||||||||| |||||| || ||| |||||||||||||||||||||| ||||||||||||||    
T  39566333 gtaaaattgttatgacatttgactactttatttcattccttaatatgtgtgtaattggttaaagcgacactcattttgaaatggagggagtagtta 39566428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 247 - 346
Target Start/End: Complemental strand, 42329562 - 42329463
Alignment:
Q  247 agtaaggctatttcagtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacgga 346  Q
    ||||||| ||||| |||||||||||||||| |||||||||  | ||| ||||||||||| |||||| || ||| |||||||| |||||||||||||||||    
T  42329562 agtaaggttattttagtaaaattgctatgacatttgactactttatttcattccttaatttgtgtgcaattggttaaagcgatactcattttgaaacgga 42329463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 262 - 355
Target Start/End: Complemental strand, 21375653 - 21375560
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagtagt 355  Q
    |||||||||||||||||||||||||  | ||| ||||| ||||||| |||| || ||||||||| ||||||||||||||||||||  |||||||    
T  21375653 gtaaaattgctatgatatttgactattttattccattctttaatctttgtgcaattggctaaagtgacactcattttgaaacggaatgagtagt 21375560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 262 - 353
Target Start/End: Complemental strand, 2729789 - 2729698
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||||||||||  ||||||||  | ||| ||||||||||||||| || || |||||||||||||| ||||||||||||||| ||||||    
T  2729789 gtaaaattgctatgacgtttgactactttatttcattccttaatctgtatgcaattggctaaagcgacaatcattttgaaacggatggagta 2729698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 247 - 346
Target Start/End: Complemental strand, 27652337 - 27652238
Alignment:
Q  247 agtaaggctatttcagtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacgga 346  Q
    ||||||| ||||| |||||||||| ||||| |||||||||  | ||| |||| ||||||||||||| || || ||||||||||||||||||| |||||||    
T  27652337 agtaaggttattttagtaaaattgttatgacatttgactattttattccatttcttaatctgtgtgtaattgcctaaagcgacactcattttaaaacgga 27652238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 262 - 353
Target Start/End: Complemental strand, 42661943 - 42661852
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||| ||||| |||||||||  | ||| ||||||||||| |||||| || |||||||||||||||||||||||||||| | ||||||    
T  42661943 gtaaaattgttatgacatttgactattttatttcattccttaatatgtgtgcaattggctaaagcgacactcattttgaaacgaatggagta 42661852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 262 - 336
Target Start/End: Complemental strand, 42978076 - 42978002
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcatt 336  Q
    ||||||||||||||| |||||||||  | ||| ||||||||||||||||||||| |||||||| |||||||||||    
T  42978076 gtaaaattgctatgacatttgactactttatttcattccttaatctgtgtgaaattggctaaaacgacactcatt 42978002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 262 - 355
Target Start/End: Complemental strand, 29807317 - 29807224
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagtagt 355  Q
    |||||||| |||| | |||||||||| | ||| ||||||||||| || |||  | |||||||||||||||| ||||||||||||||||||||||    
T  29807317 gtaaaatttctattacatttgactaatttattccattccttaatatgcgtgctattggctaaagcgacacttattttgaaacggagggagtagt 29807224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 262 - 353
Target Start/End: Complemental strand, 34972653 - 34972562
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||| || || |||||||||  | ||| ||||  |||||||||||| || |||||||||||||||||||||| ||||||||||||||    
T  34972653 gtaaaattgatacgacatttgactactttattccatttattaatctgtgtgcaattggctaaagcgacactcattttaaaacggagggagta 34972562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 255 - 353
Target Start/End: Complemental strand, 29653522 - 29653424
Alignment:
Q  255 tatttcagtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||| |||||||||||||||| |||||||||  | ||| ||||| |||||| || || || |||||||| ||||||||||||| ||| ||||||||||    
T  29653522 tattttagtaaaattgctatgacatttgactattttatttcattctttaatccgtatgcaattggctaaaacgacactcattttaaaatggagggagta 29653424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 247 - 353
Target Start/End: Complemental strand, 33822519 - 33822413
Alignment:
Q  247 agtaaggctatttcagtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacgga 346  Q
    ||||||| ||||| |||||||||||||| | |||||||||  | ||| ||||  |||||||||||| || ||| |||| ||| | |||||||||||||||    
T  33822519 agtaaggttattttagtaaaattgctataacatttgactattttatttcattaattaatctgtgtgcaattggttaaaacgatattcattttgaaacgga 33822420  T
Q  347 gggagta 353  Q
    |||||||    
T  33822419 gggagta 33822413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 295 - 353
Target Start/End: Original strand, 36660608 - 36660666
Alignment:
Q  295 cattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||||||||||||| || | ||||||||||||||||||||||||| |||||||||    
T  36660608 cattccttaatctgtgtgcaattagctaaagcgacactcattttgaaacagagggagta 36660666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 296 - 353
Target Start/End: Original strand, 7145032 - 7145089
Alignment:
Q  296 attccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||||| |||||| || |||||||||| ||||||||||||||||||||||||||    
T  7145032 attccttaatttgtgtgcaattggctaaagcaacactcattttgaaacggagggagta 7145089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 533 - 589
Target Start/End: Complemental strand, 4931938 - 4931882
Alignment:
Q  533 ggcccgacctttggggggtgcaaatagctcaatggagctgggccttcccaatgtatg 589  Q
    |||||||||||| |||||||||||||||||||||||||||| ||| ||||| |||||    
T  4931938 ggcccgacctttagggggtgcaaatagctcaatggagctggacctccccaaggtatg 4931882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 263 - 346
Target Start/End: Complemental strand, 14620496 - 14620412
Alignment:
Q  263 taaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcat-tttgaaacgga 346  Q
    |||||||||||||| |||||||||  | |||  |||||||||| |||||| || ||||||||||||||||||| |||||||||||    
T  14620496 taaaattgctatgacatttgactactttattctattccttaatatgtgtgcaattggctaaagcgacactcatatttgaaacgga 14620412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 249 - 353
Target Start/End: Complemental strand, 36296148 - 36296044
Alignment:
Q  249 taaggctatttcagtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagg 348  Q
    ||||| ||||| |||||||||||||| | |||||| ||  | ||| ||||| ||||||  |||| || |||||||||||||||||||||| ||||||||     
T  36296148 taaggttattttagtaaaattgctattacatttgattattttatttcattctttaatccatgtgcaattggctaaagcgacactcattttaaaacggagt 36296049  T
Q  349 gagta 353  Q
    |||||    
T  36296048 gagta 36296044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 247 - 338
Target Start/End: Complemental strand, 793622 - 793531
Alignment:
Q  247 agtaaggctatttcagtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcatttt 338  Q
    ||||||| ||||| |||||||||||||||| ||| |||||  | ||| ||||||||||| |||||| || |||||||| || ||||||||||    
T  793622 agtaaggttattttagtaaaattgctatgacattggactactttattccattccttaatttgtgtgcaattggctaaaacggcactcatttt 793531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 247 - 350
Target Start/End: Complemental strand, 4833654 - 4833551
Alignment:
Q  247 agtaaggctatttcagtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacgga 346  Q
    ||||||| ||||| |||||||||| ||||| |||| ||||  | ||| ||||||||||  | |||| || |||||||||||||||||||||| ||| |||    
T  4833654 agtaaggttattttagtaaaattgttatgacatttaactactttatttcattccttaacatatgtgcaattggctaaagcgacactcattttaaaatgga 4833555  T
Q  347 ggga 350  Q
    ||||    
T  4833554 ggga 4833551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 262 - 353
Target Start/End: Complemental strand, 8336410 - 8336319
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||| ||||| |||||||||  | ||| ||||||||||| | |||| || |||||||| ||||||||||||| ||| ||||||||||    
T  8336410 gtaaaattgttatgacatttgactactttattccattccttaatatttgtgtaattggctaaaacgacactcattttaaaatggagggagta 8336319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 262 - 353
Target Start/End: Original strand, 27600544 - 27600635
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||| | ||||||||||||||  | ||| ||||||||||| |||||  || ||||||||| |||||||||||| ||| ||||||||||    
T  27600544 gtaaaattacaatgatatttgactactttatttcattccttaatatgtgttcaattggctaaagtgacactcattttaaaatggagggagta 27600635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 262 - 353
Target Start/End: Complemental strand, 34446030 - 34445941
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||| ||||||||||||||||  | ||| ||||||||||| | |||| || ||| |||||||||||||||||| ||||||||||||||    
T  34446030 gtaaaatt-ctatgatatttgactactttatttcattccttaatatatgtgcaattggttaaagcgacactcatttt-aaacggagggagta 34445941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 295 - 353
Target Start/End: Complemental strand, 4967461 - 4967403
Alignment:
Q  295 cattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||| |||||||||||||  || | ||||||||||||||||||||||||||||||||||    
T  4967461 catttcttaatctgtgtgtcaaagcctaaagcgacactcattttgaaacggagggagta 4967403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 295 - 353
Target Start/End: Complemental strand, 14980021 - 14979963
Alignment:
Q  295 cattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||| |||||||||||||  || | ||||||||||||||||||||||||||||||||||    
T  14980021 catttcttaatctgtgtgccaaagcctaaagcgacactcattttgaaacggagggagta 14979963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 295 - 353
Target Start/End: Original strand, 34919918 - 34919976
Alignment:
Q  295 cattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||||||||||||| || |||||||||||| ||||||||||||| | ||||||||    
T  34919918 cattccttaatctgtgtgtaattggctaaagcgatactcattttgaaaggaagggagta 34919976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 262 - 344
Target Start/End: Original strand, 39730096 - 39730178
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacg 344  Q
    ||||||||||||||| |||||||||  | ||| ||||||||||| |||||| || || ||||| ||||||||||||| |||||    
T  39730096 gtaaaattgctatgacatttgactactttattccattccttaatatgtgtgcaattgcctaaaacgacactcattttaaaacg 39730178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 300 - 353
Target Start/End: Original strand, 36783543 - 36783596
Alignment:
Q  300 cttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||||||| || |||||||||||| ||||||||||||||||||| ||||    
T  36783543 cttaatctgtgtgcaattggctaaagcgatactcattttgaaacggaggaagta 36783596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 319 - 355
Target Start/End: Original strand, 166813 - 166849
Alignment:
Q  319 gctaaagcgacactcattttgaaacggagggagtagt 355  Q
    |||||||||||||||||||||||||||||||||||||    
T  166813 gctaaagcgacactcattttgaaacggagggagtagt 166849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 291 - 359
Target Start/End: Complemental strand, 10344917 - 10344849
Alignment:
Q  291 attgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagtagttaac 359  Q
    |||||||| |||||| |||||| |||   ||||| |||||||||||||||||||||||||||| |||||    
T  10344917 attgcatttcttaatatgtgtgtaaagacctaaaacgacactcattttgaaacggagggagtatttaac 10344849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 317 - 353
Target Start/End: Original strand, 10345096 - 10345132
Alignment:
Q  317 tggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||||||||||||||||||||||||||||||||    
T  10345096 tggctaaagcgacactcattttgaaacggagggagta 10345132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 295 - 351
Target Start/End: Complemental strand, 21319298 - 21319242
Alignment:
Q  295 cattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggag 351  Q
    ||||||||||||| |||| ||||||||||||||||||| ||||| | ||||||||||    
T  21319298 cattccttaatctatgtgcaaatggctaaagcgacacttattttaagacggagggag 21319242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 295 - 355
Target Start/End: Complemental strand, 21375539 - 21375479
Alignment:
Q  295 cattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagtagt 355  Q
    ||||| |||||||||||| || ||||||||| | |||| ||||||||||||||||||||||    
T  21375539 cattcattaatctgtgtgcaattggctaaagtggcacttattttgaaacggagggagtagt 21375479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 262 - 353
Target Start/End: Original strand, 14006042 - 14006133
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||| ||||||| |||||||||  | ||| ||||||||||| | | || || |||||||||| |||||||||||||||  |||||||||    
T  14006042 gtaaaatagctatgacatttgactactttatttcattccttaatatatatgcaattggctaaagcaacactcattttgaaatagagggagta 14006133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 296 - 351
Target Start/End: Complemental strand, 24436509 - 24436454
Alignment:
Q  296 attccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggag 351  Q
    |||||||||||| |||| || |||||||| ||||||||||||| ||||||||||||    
T  24436509 attccttaatctatgtgcaattggctaaaacgacactcattttaaaacggagggag 24436454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 353
Target Start/End: Original strand, 4371533 - 4371591
Alignment:
Q  295 cattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||||| |||||| || | | |||| ||||||||||||||||||||||||||||    
T  4371533 cattccttaatttgtgtgcaattagttaaaacgacactcattttgaaacggagggagta 4371591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 353
Target Start/End: Original strand, 4751697 - 4751731
Alignment:
Q  319 gctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||||||||||||||||||||||||||||||    
T  4751697 gctaaagcgacactcattttgaaacggagggagta 4751731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 353
Target Start/End: Original strand, 31889902 - 31889960
Alignment:
Q  295 cattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||| |||||||||||||  || | ||||||| ||||||||||||||||||||||||||    
T  31889902 catttcttaatctgtgtgtcaaagcctaaagctacactcattttgaaacggagggagta 31889960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 353
Target Start/End: Complemental strand, 32158561 - 32158527
Alignment:
Q  319 gctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||||||||||||||||||||||||||||||    
T  32158561 gctaaagcgacactcattttgaaacggagggagta 32158527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 291 - 356
Target Start/End: Original strand, 4631098 - 4631163
Alignment:
Q  291 attgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagtagtt 356  Q
    |||| ||| |||||| |||||| |||   ||||| |||||||||||||||||||||||||||||||    
T  4631098 attgtatttcttaatatgtgtgtaaacacctaaaacgacactcattttgaaacggagggagtagtt 4631163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 320 - 353
Target Start/End: Original strand, 4742433 - 4742466
Alignment:
Q  320 ctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||||||||||||||||||||||||||||    
T  4742433 ctaaagcgacactcattttgaaacggagggagta 4742466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 300 - 353
Target Start/End: Complemental strand, 12167575 - 12167522
Alignment:
Q  300 cttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||| |||||| || | ||||||||||||||||||||||||||||| |||||    
T  12167575 cttaatttgtgtgcaattagctaaagcgacactcattttgaaacggagagagta 12167522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 262 - 342
Target Start/End: Complemental strand, 3306012 - 3305932
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaa 342  Q
    ||||||||||||||| |||||||||  | ||| ||||||||||| |  ||| || ||| |||| |||||||||||||||||    
T  3306012 gtaaaattgctatgacatttgactactttatttcattccttaatatacgtgcaattggttaaaacgacactcattttgaaa 3305932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 317 - 353
Target Start/End: Original strand, 42104227 - 42104263
Alignment:
Q  317 tggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||| ||||||||||||||||||||||||||||    
T  42104227 tggctaaaacgacactcattttgaaacggagggagta 42104263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 295 - 346
Target Start/End: Complemental strand, 38982124 - 38982073
Alignment:
Q  295 cattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacgga 346  Q
    ||||||||||| |||||| || |||||||| ||||| |||||||||||||||    
T  38982124 cattccttaatttgtgtgcaattggctaaaacgacattcattttgaaacgga 38982073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 319 - 353
Target Start/End: Complemental strand, 15566486 - 15566452
Alignment:
Q  319 gctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||||||||||||||| ||||||||||||||    
T  15566486 gctaaagcgacactcattttaaaacggagggagta 15566452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 295 - 353
Target Start/End: Complemental strand, 43257830 - 43257773
Alignment:
Q  295 cattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||| |||||||||||| || |||||||| | ||||||||||| ||||||||||||||    
T  43257830 cattctttaatctgtgtgcaattggctaaaac-acactcattttaaaacggagggagta 43257773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 541 - 597
Target Start/End: Complemental strand, 1366900 - 1366844
Alignment:
Q  541 ctttggggggtgcaaatagctcaatggagctgggccttcccaatgtatgggtctcat 597  Q
    |||||||| | ||||| ||||||||||||||||||||  ||||  ||||||||||||    
T  1366900 ctttggggtgagcaaagagctcaatggagctgggcctctccaagatatgggtctcat 1366844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 321 - 353
Target Start/End: Original strand, 2729953 - 2729985
Alignment:
Q  321 taaagcgacactcattttgaaacggagggagta 353  Q
    |||| ||||||||||||||||||||||||||||    
T  2729953 taaaacgacactcattttgaaacggagggagta 2729985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 295 - 343
Target Start/End: Complemental strand, 4751500 - 4751452
Alignment:
Q  295 cattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaac 343  Q
    ||||||||||| |||||| || |||||||| ||||||||||||| ||||    
T  4751500 cattccttaatatgtgtgcaattggctaaaacgacactcattttaaaac 4751452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 293 - 353
Target Start/End: Original strand, 11977768 - 11977828
Alignment:
Q  293 tgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||| |||||| |||||| |||  ||| || ||||||||||||||||||||| ||||||    
T  11977768 tgcatttcttaatatgtgtgtaaaaagcttaaacgacactcattttgaaacggatggagta 11977828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 317 - 353
Target Start/End: Original strand, 21375813 - 21375849
Alignment:
Q  317 tggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||| ||||||||||||||||||||| ||||||    
T  21375813 tggctaaaacgacactcattttgaaacggaaggagta 21375849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 317 - 353
Target Start/End: Complemental strand, 29044736 - 29044700
Alignment:
Q  317 tggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||||||||| ||||||||||||||| ||||||    
T  29044736 tggctaaagcgacagtcattttgaaacggatggagta 29044700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 317 - 353
Target Start/End: Complemental strand, 36660418 - 36660382
Alignment:
Q  317 tggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||| |||||||||||||||||| ||||||||    
T  36660418 tggctaaagtgacactcattttgaaacgaagggagta 36660382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 546 - 594
Target Start/End: Complemental strand, 36869611 - 36869563
Alignment:
Q  546 gggggtgcaaatagctcaatggagctgggccttcccaatgtatgggtct 594  Q
    ||||||||||| |||||||||||| |||| |||||||| ||||| ||||    
T  36869611 gggggtgcaaagagctcaatggagttgggacttcccaaggtatgagtct 36869563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 133; Significance: 8e-69; HSPs: 64)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 205 - 353
Target Start/End: Original strand, 36915462 - 36915610
Alignment:
Q  205 attcaatattggaacatgtgcctttctaattgattaaaaaatagtaaggctatttcagtaaaattgctatgatatttgactaaatgattgcattccttaa 304  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36915462 attcaatattggaacatgtgcctttctaattgattaaaaaatagtaaggctatttcagtaaaattgctatgatatttgactaaatgattgcattccttaa 36915561  T
Q  305 tctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||| |||||||||||||||| ||||||||||||| |||||||| |||||    
T  36915562 tctatgtgaaaatggctaaaacgacactcattttaaaacggagagagta 36915610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 247 - 353
Target Start/End: Original strand, 19906549 - 19906655
Alignment:
Q  247 agtaaggctatttcagtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacgga 346  Q
    ||||||| ||||| |||||||||||||||| |||||||||  | ||| ||||||||||||  |||| || ||||||||||||||||||||||||||||||    
T  19906549 agtaaggttattttagtaaaattgctatgacatttgactattttattccattccttaatccatgtgcaattggctaaagcgacactcattttgaaacgga 19906648  T
Q  347 gggagta 353  Q
    |||||||    
T  19906649 gggagta 19906655  T

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Target: chr7; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 262 - 353
Target Start/End: Original strand, 1742141 - 1742232
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||||||||| |||||||||  | ||| ||||||||||| |||||| || |||||||||||||||||||||||||||||||||||||    
T  1742141 gtaaaattgctatgacatttgactactttattccattccttaatatgtgtgcaattggctaaagcgacactcattttgaaacggagggagta 1742232  T

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Target: chr7; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 247 - 353
Target Start/End: Complemental strand, 32345852 - 32345746
Alignment:
Q  247 agtaaggctatttcagtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacgga 346  Q
    ||||||| ||||| |||||||||| ||||| |||||||||  | |||  ||| ||||||||||||| || ||||||||||||||||||||||||||||||    
T  32345852 agtaaggttattttagtaaaattgttatgacatttgactactttattcaatttcttaatctgtgtgcaattggctaaagcgacactcattttgaaacgga 32345753  T
Q  347 gggagta 353  Q
    |||||||    
T  32345752 gggagta 32345746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 263 - 353
Target Start/End: Complemental strand, 45933589 - 45933499
Alignment:
Q  263 taaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||||||||||||||||||  | |||  ||||||||||||||||| || |||||||||||||||||||||| ||||||||||||||    
T  45933589 taaaattgctatgatatttgactattttattcaattccttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggagggagta 45933499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 247 - 353
Target Start/End: Original strand, 6521954 - 6522060
Alignment:
Q  247 agtaaggctatttcagtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacgga 346  Q
    ||||||| ||||| |||| ||||| ||||| |||||||||  | ||| ||||||||||| |||||| || |||||||||||||||||||||| |||||||    
T  6521954 agtaaggttattttagtataattgttatgacatttgactactttatttcattccttaatttgtgtgcaattggctaaagcgacactcattttaaaacgga 6522053  T
Q  347 gggagta 353  Q
    |||||||    
T  6522054 gggagta 6522060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 247 - 350
Target Start/End: Complemental strand, 39117506 - 39117403
Alignment:
Q  247 agtaaggctatttcagtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacgga 346  Q
    ||||||| ||||| |||||||||| ||||| |||||||||  | ||| ||||| |||||||||||| || ||| |||||||||||||||||| |||||||    
T  39117506 agtaaggttattttagtaaaattgttatgacatttgactactttattccattctttaatctgtgtgcaagtggataaagcgacactcattttaaaacgga 39117407  T
Q  347 ggga 350  Q
    ||||    
T  39117406 ggga 39117403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 247 - 353
Target Start/End: Original strand, 26963616 - 26963722
Alignment:
Q  247 agtaaggctatttcagtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacgga 346  Q
    ||||||| ||||| |||||||||| ||||| |||||||||  | ||| |||| |||||| |||||| |||||| |||||| |||||||||||||||||||    
T  26963616 agtaaggttattttagtaaaattgttatgacatttgactattttattccatttcttaatttgtgtgtaaatggttaaagcaacactcattttgaaacgga 26963715  T
Q  347 gggagta 353  Q
     ||||||    
T  26963716 tggagta 26963722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 262 - 353
Target Start/End: Complemental strand, 7795244 - 7795153
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||||||||| |||| ||||  | ||| ||||||||||| |||||  || |||||||||||||||||||||||||||||| ||||||    
T  7795244 gtaaaattgctatgacattttactactttatttcattccttaatttgtgtacaattggctaaagcgacactcattttgaaacggatggagta 7795153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 262 - 353
Target Start/End: Complemental strand, 29530936 - 29530845
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||||||||| |||||||||  | |||  ||||||||||||||||| || |||||||| ||||||||||||| ||||| ||||||||    
T  29530936 gtaaaattgctatgacatttgactactttattttattccttaatctgtgtgcaattggctaaatcgacactcattttaaaacgaagggagta 29530845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 262 - 353
Target Start/End: Original strand, 37815874 - 37815965
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||||||||| |||||||||  | ||| ||||| ||||| |||||| || |||||||| ||||||||||||| ||||||||||||||    
T  37815874 gtaaaattgctatgacatttgactattttattccattctttaatatgtgtgcaattggctaaaacgacactcattttaaaacggagggagta 37815965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 289 - 353
Target Start/End: Original strand, 42121719 - 42121783
Alignment:
Q  289 tgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||| |||||||||||||||||| || |||||||||||||||||||||||||| ||||| ||||    
T  42121719 tgatttcattccttaatctgtgtgcaattggctaaagcgacactcattttgaaatggaggaagta 42121783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 247 - 354
Target Start/End: Complemental strand, 19276633 - 19276527
Alignment:
Q  247 agtaaggctatttcagtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacgga 346  Q
    ||||||| ||||| |||||| ||||||| | |||||||||  | | | |||||||||||||||||| || |||||||||||||||| ||||||||| |||    
T  19276633 agtaaggttatttaagtaaa-ttgctataacatttgactactttacttcattccttaatctgtgtgcaattggctaaagcgacactgattttgaaatgga 19276535  T
Q  347 gggagtag 354  Q
    | ||||||    
T  19276534 gagagtag 19276527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 262 - 353
Target Start/End: Original strand, 27935917 - 27936008
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||| |||||  ||||||||  | |||  ||||||||||||||||| |  |||||||||||||||||||||||||||||| ||||||    
T  27935917 gtaaaattgttatgacttttgactactttattcaattccttaatctgtgtgcagttggctaaagcgacactcattttgaaacggatggagta 27936008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 262 - 353
Target Start/End: Original strand, 48684873 - 48684964
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||| ||||| |||||||||  | ||| |||||||||||||||||| || ||  |||||||||||||||||| |||| |||||||||    
T  48684873 gtaaaattgttatgacatttgactactttatttcattccttaatctgtgtgcaattgattaaagcgacactcattttaaaactgagggagta 48684964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 295 - 353
Target Start/End: Original strand, 22298184 - 22298242
Alignment:
Q  295 cattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||||||||||||| || |||||||| |||||||||||||||||| |||||||||    
T  22298184 cattccttaatctgtgtgcaattggctaaaacgacactcattttgaaacagagggagta 22298242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 295 - 353
Target Start/End: Original strand, 40299021 - 40299079
Alignment:
Q  295 cattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||||| |||||| || |||||||| ||||||||||||||||||||||||||||    
T  40299021 cattccttaatttgtgtgcaattggctaaaacgacactcattttgaaacggagggagta 40299079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 265 - 346
Target Start/End: Complemental strand, 16564801 - 16564720
Alignment:
Q  265 aaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacgga 346  Q
    |||||||||||| |||||||||  | ||| ||||||||||||||| || || ||| |||||||||||||||||| |||||||    
T  16564801 aaattgctatgacatttgactactttatttcattccttaatctgtatgcaattggttaaagcgacactcattttaaaacgga 16564720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 265 - 346
Target Start/End: Original strand, 16600861 - 16600942
Alignment:
Q  265 aaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacgga 346  Q
    |||||||||||| |||||||||  | ||| ||||||||||||||| || || ||| |||||||||||||||||| |||||||    
T  16600861 aaattgctatgacatttgactactttatttcattccttaatctgtatgcaattggttaaagcgacactcattttaaaacgga 16600942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 262 - 355
Target Start/End: Original strand, 35777969 - 35778062
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagtagt 355  Q
    ||||||||| ||||| |||||||||  | ||| ||||||||||| |||||| || | |||||||||| ||||||||| |||||||| |||||||    
T  35777969 gtaaaattgttatgacatttgactactttatttcattccttaatatgtgtgcaattagctaaagcgatactcattttaaaacggagagagtagt 35778062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 261 - 353
Target Start/End: Complemental strand, 27947503 - 27947411
Alignment:
Q  261 agtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||||||||||| |||||||||  | |||  |||| ||||| |||||| || ||| ||||| |||||||||||||||||||| ||||||    
T  27947503 agtaaaattgctatgacatttgactactttattcaattcattaatatgtgtgcaattggttaaagtgacactcattttgaaacggatggagta 27947411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 262 - 338
Target Start/End: Complemental strand, 42879935 - 42879859
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcatttt 338  Q
    ||||||||||||||| ||||| |||  | ||| ||||||||| |||||||| || ||||||||||||||||||||||    
T  42879935 gtaaaattgctatgacatttgcctactttattccattccttactctgtgtgcaattggctaaagcgacactcatttt 42879859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 262 - 353
Target Start/End: Original strand, 23935571 - 23935662
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||||||||| |||||||||  | ||| ||||| ||||| || ||  || ||| |||||||||||||||||| ||||||||||||||    
T  23935571 gtaaaattgctatgacatttgactactttattccattctttaatgtgggtacaattgggtaaagcgacactcattttaaaacggagggagta 23935662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 262 - 353
Target Start/End: Original strand, 44453283 - 44453374
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||| ||||| |||||||||  | ||| ||||| ||||||||| || || |||||||| ||||||||||||| ||||||| ||||||    
T  44453283 gtaaaattgttatgacatttgactactttattccattctttaatctgtatgcaattggctaaaacgacactcattttaaaacggaaggagta 44453374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 18292324 - 18292286
Alignment:
Q  317 tggctaaagcgacactcattttgaaacggagggagtagt 355  Q
    |||||||||||||||||||||||||||||||||||||||    
T  18292324 tggctaaagcgacactcattttgaaacggagggagtagt 18292286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 317 - 359
Target Start/End: Complemental strand, 19906404 - 19906362
Alignment:
Q  317 tggctaaagcgacactcattttgaaacggagggagtagttaac 359  Q
    |||||||||| ||||||||||||||||||||||||||||||||    
T  19906404 tggctaaagcaacactcattttgaaacggagggagtagttaac 19906362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 255 - 353
Target Start/End: Complemental strand, 36447079 - 36446981
Alignment:
Q  255 tatttcagtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||| |||||||||||||||| |||||||||  | ||| ||||| ||||| |||||| || || ||||||| ||||||||||| |||| || ||||||    
T  36447079 tattttagtaaaattgctatgacatttgactactttattccattcattaatttgtgtgcaattgtctaaagcaacactcattttaaaacagatggagta 36446981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 262 - 354
Target Start/End: Complemental strand, 23155463 - 23155371
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagtag 354  Q
    ||||||||||||||| |||| ||||  | |||  |||| ||||||||| || || |||||||||||| ||||||||| ||||||| |||||||    
T  23155463 gtaaaattgctatgacatttaactactttattcaattctttaatctgtatgcaattggctaaagcgatactcattttaaaacggatggagtag 23155371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 262 - 353
Target Start/End: Original strand, 10599513 - 10599604
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||||||||| |||||||||  | ||| ||||||||||| | |||| || ||  |||| ||||||||||||| |||||||| |||||    
T  10599513 gtaaaattgctatgacatttgactactttattccattccttaatatatgtgcaattgattaaaacgacactcattttaaaacggagagagta 10599604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 247 - 353
Target Start/End: Complemental strand, 10684847 - 10684741
Alignment:
Q  247 agtaaggctatttcagtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacgga 346  Q
    ||||||| ||||| |||||||||| |||||||||| ||||  | |||  |||||||||| | |||| || ||  |||| ||||||| |||||||||||||    
T  10684847 agtaaggttattttagtaaaattgttatgatatttaactattttattttattccttaatatatgtgtaattgattaaaacgacacttattttgaaacgga 10684748  T
Q  347 gggagta 353  Q
     ||||||    
T  10684747 tggagta 10684741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 353
Target Start/End: Complemental strand, 36912096 - 36912062
Alignment:
Q  319 gctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||||||||||||||||||||||||||||||    
T  36912096 gctaaagcgacactcattttgaaacggagggagta 36912062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 299 - 353
Target Start/End: Complemental strand, 40207353 - 40207299
Alignment:
Q  299 ccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||| |||||| || |||||||||| ||||||||||||||||||| ||||||    
T  40207353 ccttaatatgtgtgcaattggctaaagcaacactcattttgaaacggatggagta 40207299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 353
Target Start/End: Complemental strand, 42259519 - 42259461
Alignment:
Q  295 cattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||| |||||| ||||| || |||||| ||||||||||||||||||||||| ||||||    
T  42259519 cattctttaatccgtgtgcaattggctagagcgacactcattttgaaacggaaggagta 42259461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 320 - 353
Target Start/End: Complemental strand, 6747213 - 6747180
Alignment:
Q  320 ctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||||||||||||||||||||||||||||    
T  6747213 ctaaagcgacactcattttgaaacggagggagta 6747180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 318 - 354
Target Start/End: Complemental strand, 1741981 - 1741945
Alignment:
Q  318 ggctaaagcgacactcattttgaaacggagggagtag 354  Q
    ||||||| |||||||||||||||||||||||||||||    
T  1741981 ggctaaaacgacactcattttgaaacggagggagtag 1741945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 303 - 355
Target Start/End: Complemental strand, 30833057 - 30833005
Alignment:
Q  303 aatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagtagt 355  Q
    |||||||  |||| || ||||||||||||||||||||||||||| ||||||||    
T  30833057 aatctgttcgaaattgactaaagcgacactcattttgaaacggaaggagtagt 30833005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 317 - 353
Target Start/End: Original strand, 40207540 - 40207576
Alignment:
Q  317 tggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||| |||||||||||||||||||||||||||    
T  40207540 tggctaaagtgacactcattttgaaacggagggagta 40207576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 317 - 353
Target Start/End: Complemental strand, 40298838 - 40298802
Alignment:
Q  317 tggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||| |||||||||||||||||||||||||||    
T  40298838 tggctaaagtgacactcattttgaaacggagggagta 40298802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 321 - 353
Target Start/End: Original strand, 42044146 - 42044178
Alignment:
Q  321 taaagcgacactcattttgaaacggagggagta 353  Q
    |||||||||||||||||||||||||||||||||    
T  42044146 taaagcgacactcattttgaaacggagggagta 42044178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 317 - 348
Target Start/End: Complemental strand, 2297028 - 2296997
Alignment:
Q  317 tggctaaagcgacactcattttgaaacggagg 348  Q
    ||||||||||||||||||||||||||||||||    
T  2297028 tggctaaagcgacactcattttgaaacggagg 2296997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 262 - 353
Target Start/End: Complemental strand, 13405128 - 13405037
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||||||| || |||||||||  | ||| |||| |||||| |||||| || ||| |||| ||||||||||||| |||| || ||||||    
T  13405128 gtaaaattgctacgacatttgactactttatttcatttcttaatatgtgtgcaattggttaaaacgacactcattttaaaacagaaggagta 13405037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 317 - 356
Target Start/End: Original strand, 32345999 - 32346038
Alignment:
Q  317 tggctaaagcgacactcattttgaaacggagggagtagtt 356  Q
    |||||||| ||||||||||||||||||||| |||||||||    
T  32345999 tggctaaaacgacactcattttgaaacggatggagtagtt 32346038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 295 - 346
Target Start/End: Complemental strand, 33056254 - 33056203
Alignment:
Q  295 cattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacgga 346  Q
    ||||||||||||| |||| || || ||||| |||||||||||||||||||||    
T  33056254 cattccttaatctatgtgcaattgactaaaacgacactcattttgaaacgga 33056203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 291 - 353
Target Start/End: Complemental strand, 715846 - 715784
Alignment:
Q  291 attgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||| |||||| | |||| |||  |||||| ||||||||||||||||||||| ||||||    
T  715846 attgcatttcttaatatatgtgtaaagagctaaaacgacactcattttgaaacggatggagta 715784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 291 - 353
Target Start/End: Original strand, 6747394 - 6747456
Alignment:
Q  291 attgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||| |||||| |||||| |||   ||||| |||||||||||||||||||||| |||||    
T  6747394 attgcatttcttaatatgtgtgtaaacacctaaaacgacactcattttgaaacggagagagta 6747456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 12977847 - 12977885
Alignment:
Q  317 tggctaaagcgacactcattttgaaacggagggagtagt 355  Q
    |||||||||||||||||||||| ||| ||||||||||||    
T  12977847 tggctaaagcgacactcattttaaaaaggagggagtagt 12977885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 291 - 353
Target Start/End: Original strand, 18292503 - 18292565
Alignment:
Q  291 attgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||| |||||| |||||| |||   ||||| ||||||||||||||||||| ||||||||    
T  18292503 attgcatttcttaatatgtgtgtaaacacctaaaacgacactcattttgaaacgaagggagta 18292565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 22597221 - 22597183
Alignment:
Q  317 tggctaaagcgacactcattttgaaacggagggagtagt 355  Q
    ||||||||| ||||||||||||||||||||| |||||||    
T  22597221 tggctaaagtgacactcattttgaaacggagagagtagt 22597183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 319 - 353
Target Start/End: Original strand, 27947665 - 27947699
Alignment:
Q  319 gctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||| ||||||||||||||||||||||||||||    
T  27947665 gctaaaacgacactcattttgaaacggagggagta 27947699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 319 - 353
Target Start/End: Complemental strand, 40799979 - 40799945
Alignment:
Q  319 gctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||| |||||||||||||||||||||||||||    
T  40799979 gctaaagtgacactcattttgaaacggagggagta 40799945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 320 - 354
Target Start/End: Original strand, 44057764 - 44057798
Alignment:
Q  320 ctaaagcgacactcattttgaaacggagggagtag 354  Q
    ||||| |||||||||||||||||||||||||||||    
T  44057764 ctaaaacgacactcattttgaaacggagggagtag 44057798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 353
Target Start/End: Original strand, 5723170 - 5723227
Alignment:
Q  296 attccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||||| |||||| || || ||||| ||||||||||||| ||||||| ||||||    
T  5723170 attccttaatttgtgtgcaattgactaaaacgacactcattttaaaacggatggagta 5723227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 352
Target Start/End: Original strand, 17869420 - 17869477
Alignment:
Q  295 cattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagt 352  Q
    |||||||||||||||||| || || ||||| | ||| |||||||||||| ||||||||    
T  17869420 cattccttaatctgtgtgcaattgactaaaacaacattcattttgaaacagagggagt 17869477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 353
Target Start/End: Original strand, 19288513 - 19288546
Alignment:
Q  320 ctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||| |||||||||||||||||||||||||||    
T  19288513 ctaaagtgacactcattttgaaacggagggagta 19288546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 360
Target Start/End: Complemental strand, 25440859 - 25440819
Alignment:
Q  319 gctaaagcgacactcattttgaaacggagggagtagttaact 360  Q
    ||||||||||||||||||||||||||| ||||| ||||||||    
T  25440859 gctaaagcgacactcattttgaaacgg-gggagaagttaact 25440819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 352
Target Start/End: Original strand, 36836255 - 36836312
Alignment:
Q  295 cattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagt 352  Q
    |||||||||||| ||||  || |||||||| ||||||| |||||||||||||| ||||    
T  36836255 cattccttaatccgtgtacaattggctaaaacgacactgattttgaaacggagagagt 36836312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 353
Target Start/End: Complemental strand, 42043950 - 42043897
Alignment:
Q  300 cttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||| ||||| || ||||||||  ||| |||||||||||||||||||||||    
T  42043950 cttaatccgtgtgcaattggctaaaatgacgctcattttgaaacggagggagta 42043897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 291 - 351
Target Start/End: Complemental strand, 12983127 - 12983067
Alignment:
Q  291 attgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggag 351  Q
    |||||||| |||||| |||||| |||   ||||| ||||||||||||||||||| ||||||    
T  12983127 attgcatttcttaatatgtgtgtaaacacctaaaacgacactcattttgaaacgaagggag 12983067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 317 - 353
Target Start/End: Complemental strand, 18733444 - 18733408
Alignment:
Q  317 tggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||||||||||||||||| ||||||| ||||||    
T  18733444 tggctaaagcgacactcattttaaaacggatggagta 18733408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 317 - 353
Target Start/End: Complemental strand, 26963470 - 26963434
Alignment:
Q  317 tggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||||| |||||||||||||||||| |||||||    
T  26963470 tggctaaagcaacactcattttgaaacggggggagta 26963434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 320 - 348
Target Start/End: Complemental strand, 36836047 - 36836019
Alignment:
Q  320 ctaaagcgacactcattttgaaacggagg 348  Q
    |||||||||||||||||||||||||||||    
T  36836047 ctaaagcgacactcattttgaaacggagg 36836019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 317 - 353
Target Start/End: Complemental strand, 40339449 - 40339413
Alignment:
Q  317 tggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||| ||||||||||||| ||||||||||||||    
T  40339449 tggctaaaacgacactcattttaaaacggagggagta 40339413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 293 - 353
Target Start/End: Original strand, 40339639 - 40339699
Alignment:
Q  293 tgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||| ||||||||||||| || |||||||| ||||||  ||||| ||||||| ||||||    
T  40339639 tgcatttcttaatctgtgtgcaattggctaaaacgacacatattttaaaacggatggagta 40339699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 317 - 353
Target Start/End: Original strand, 43813507 - 43813543
Alignment:
Q  317 tggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||||||||||||||||| ||||||||| ||||    
T  43813507 tggctaaagcgacactcattttaaaacggaggtagta 43813543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 2e-26; HSPs: 67)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 262 - 359
Target Start/End: Complemental strand, 49468712 - 49468615
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagtagttaac 359  Q
    ||||||||||||||| |||||||||  | ||| |||||||||||||||||| || |||||||||||||||||||||||||| |||||||||| |||||    
T  49468712 gtaaaattgctatgacatttgactattttatttcattccttaatctgtgtgcaattggctaaagcgacactcattttgaaatggagggagtatttaac 49468615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 247 - 353
Target Start/End: Original strand, 2459140 - 2459246
Alignment:
Q  247 agtaaggctatttcagtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacgga 346  Q
    ||||||| ||||| |||||||||| ||||| |||||||||  | |||  ||| ||||||||||||| || ||||||||||||||||||||||||||||||    
T  2459140 agtaaggttattttagtaaaattgttatgacatttgactacttcatttaatttcttaatctgtgtgcaattggctaaagcgacactcattttgaaacgga 2459239  T
Q  347 gggagta 353  Q
    |||||||    
T  2459240 gggagta 2459246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 247 - 353
Target Start/End: Original strand, 22665071 - 22665177
Alignment:
Q  247 agtaaggctatttcagtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacgga 346  Q
    ||||||| || || ||||||||||||||||||||||||||  | ||| ||||| |||||||||||| || || ||||||||||||||||||| ||||||     
T  22665071 agtaaggttagtttagtaaaattgctatgatatttgactactttattccattcgttaatctgtgtgcaattgactaaagcgacactcattttaaaacggt 22665170  T
Q  347 gggagta 353  Q
    |||||||    
T  22665171 gggagta 22665177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 247 - 355
Target Start/End: Complemental strand, 11134478 - 11134370
Alignment:
Q  247 agtaaggctatttcagtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacgga 346  Q
    ||||||||||||| ||||||| ||  |||| |||||||||  | ||| ||||||||||| |||||| || |||||||| ||||||||||||||||| |||    
T  11134478 agtaaggctattttagtaaaactgtcatgacatttgactactttattccattccttaatatgtgtgcaattggctaaaacgacactcattttgaaatgga 11134379  T
Q  347 gggagtagt 355  Q
    |||||||||    
T  11134378 gggagtagt 11134370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 247 - 354
Target Start/End: Complemental strand, 28200240 - 28200133
Alignment:
Q  247 agtaaggctatttcagtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacgga 346  Q
    ||||||| ||||| |||||||||||||||| ||||||| |  | |||  ||| ||||||||||||| || |||||||||||||||||||||| |||||||    
T  28200240 agtaaggttattttagtaaaattgctatgacatttgacaactttattcaatttcttaatctgtgtgcaattggctaaagcgacactcattttaaaacgga 28200141  T
Q  347 gggagtag 354  Q
     |||||||    
T  28200140 aggagtag 28200133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 262 - 353
Target Start/End: Complemental strand, 32806939 - 32806848
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||||||||| |||||||||  | ||| ||||||||||| |||||| || |||||||||||||| |||||||||||||||| |||||    
T  32806939 gtaaaattgctatgacatttgactactttattccattccttaatatgtgtgcaactggctaaagcgacaatcattttgaaacggagagagta 32806848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 255 - 348
Target Start/End: Complemental strand, 254921 - 254828
Alignment:
Q  255 tatttcagtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagg 348  Q
    ||||| |||||||||||||||| |||||||||  | | | |||| ||||||||||||| || || |||||||||||||||||||||||||||||    
T  254921 tattttagtaaaattgctatgacatttgactactttagttcatttcttaatctgtgtgtaattgactaaagcgacactcattttgaaacggagg 254828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 262 - 355
Target Start/End: Original strand, 9915594 - 9915687
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagtagt 355  Q
    ||||||||||||||| |||||||||  | ||| ||||||||||| ||||||  | | |||||| ||||||||||||||||||||||||||||||    
T  9915594 gtaaaattgctatgacatttgactactttattacattccttaatatgtgtgttattagctaaaacgacactcattttgaaacggagggagtagt 9915687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 262 - 353
Target Start/End: Original strand, 5463725 - 5463816
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||| ||||| | |||||||  | ||||||||||||||| | |||| || |||||||||||||||||||||||||||||| ||||||    
T  5463725 gtaaaattgttatgacaattgactactttattgcattccttaatatatgtgcaattggctaaagcgacactcattttgaaacggatggagta 5463816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 249 - 356
Target Start/End: Complemental strand, 50591334 - 50591227
Alignment:
Q  249 taaggctatttcagtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagg 348  Q
    ||||| ||||| |||||||||| ||||| |||| ||||  | ||| |||||||||||||||||  || |||||||||||||||||||||| ||||| | |    
T  50591334 taaggttattttagtaaaattgttatgacattttactactttattccattccttaatctgtgtacaattggctaaagcgacactcattttaaaacgaatg 50591235  T
Q  349 gagtagtt 356  Q
    ||||||||    
T  50591234 gagtagtt 50591227  T

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Target: chr1; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 249 - 347
Target Start/End: Original strand, 26252256 - 26252354
Alignment:
Q  249 taaggctatttcagtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggag 347  Q
    ||||| ||||| ||||||||||| |||| |||||||||  | ||  |||||||||||||||||| || ||| |||||| ||||||||||||||||||||    
T  26252256 taaggttattttagtaaaattgcaatgacatttgactacttaatcccattccttaatctgtgtgcaattggttaaagcaacactcattttgaaacggag 26252354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 262 - 348
Target Start/End: Original strand, 48009160 - 48009246
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagg 348  Q
    |||||||| ||||||||||||||||  | ||| ||||||||||| |||||| || || ||||| |||||||||||||||||||||||    
T  48009160 gtaaaattactatgatatttgactattttatttcattccttaatatgtgtgcaattgactaaaacgacactcattttgaaacggagg 48009246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 247 - 353
Target Start/End: Original strand, 49894916 - 49895022
Alignment:
Q  247 agtaaggctatttcagtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacgga 346  Q
    ||||||| ||||| |||||||||| ||||| |||||||||  | ||| |||||||||||||||||| || |||| ||| ||||||||||||| ||| |||    
T  49894916 agtaaggttattttagtaaaattgttatgacatttgactattttattccattccttaatctgtgtgcaattggccaaaacgacactcattttaaaatgga 49895015  T
Q  347 gggagta 353  Q
     ||||||    
T  49895016 tggagta 49895022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 249 - 350
Target Start/End: Complemental strand, 42650265 - 42650164
Alignment:
Q  249 taaggctatttcagtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagg 348  Q
    ||||| ||||| |||||||||||||||| |||||| ||  | ||| || || |||||||||||| || |||||||||||||| ||||||||||| |||||    
T  42650265 taaggttattttagtaaaattgctatgacatttgattactttatttcagtctttaatctgtgtgcaattggctaaagcgacattcattttgaaagggagg 42650166  T
Q  349 ga 350  Q
    ||    
T  42650165 ga 42650164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 296 - 353
Target Start/End: Complemental strand, 48259832 - 48259775
Alignment:
Q  296 attccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||    
T  48259832 attccttaatctgtgtgcaattggctaaaacgacactcattttgaaacggagggagta 48259775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 255 - 355
Target Start/End: Complemental strand, 5854234 - 5854134
Alignment:
Q  255 tatttcagtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagtag 354  Q
    ||||| |||||||||| ||||| |||| ||||  | |||  ||||||||||||||||| || ||||||||| |||||||||||||||||||| ||| |||    
T  5854234 tattttagtaaaattgttatgacatttaactactttattctattccttaatctgtgtgcaattggctaaagtgacactcattttgaaacggacggattag 5854135  T
Q  355 t 355  Q
    |    
T  5854134 t 5854134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 262 - 353
Target Start/End: Original strand, 10842930 - 10843021
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||||||||| |||||||||  | ||| ||||||||||| | |||| || || ||||| ||||||||||||||||||||| ||||||    
T  10842930 gtaaaattgctatgacatttgactactttatttcattccttaatatttgtgcaattgactaaaacgacactcattttgaaacggatggagta 10843021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 262 - 353
Target Start/End: Complemental strand, 49426420 - 49426329
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||| ||| | |||||||||  | ||| ||||||||||| |||||| || || ||||||||||||||||||||||||||| ||||||    
T  49426420 gtaaaattgatatcacatttgactacttcattccattccttaatatgtgtgcaattgcctaaagcgacactcattttgaaacggatggagta 49426329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 247 - 341
Target Start/End: Complemental strand, 672300 - 672206
Alignment:
Q  247 agtaaggctatttcagtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaa 341  Q
    ||||||| ||||| |||||||||| |||||||||||||||  | ||| |||||  ||||||||||| || ||| |||| ||||||||||||||||    
T  672300 agtaaggttattttagtaaaattgatatgatatttgactactttattccattctataatctgtgtgcaattggttaaaacgacactcattttgaa 672206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 295 - 353
Target Start/End: Complemental strand, 28751378 - 28751320
Alignment:
Q  295 cattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||||||||||||| || |||||||| |||||||||||||||||| |||||||||    
T  28751378 cattccttaatctgtgtgcaattggctaaaacgacactcattttgaaacagagggagta 28751320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 295 - 353
Target Start/End: Complemental strand, 24040994 - 24040936
Alignment:
Q  295 cattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||||||  ||||||| |||||||||||||||||||||| ||||| ||||||||    
T  24040994 cattccttaatccatgtgaaattggctaaagcgacactcattttaaaacgtagggagta 24040936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 262 - 356
Target Start/End: Complemental strand, 31491771 - 31491677
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagtagtt 356  Q
    ||||||||||||||| |||||||||  | ||| ||||||| ||| ||| || || | |||||| ||||||||||||| |||||||| ||||||||    
T  31491771 gtaaaattgctatgacatttgactactttattccattcctgaatatgtttgcaatttgctaaaacgacactcattttaaaacggagagagtagtt 31491677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 262 - 356
Target Start/End: Original strand, 46046123 - 46046217
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagtagtt 356  Q
    |||||||||||| ||  ||||||||  | |||| |||||||||| | |||| || |||||||| ||||| ||||| |||||||||||||||||||    
T  46046123 gtaaaattgctacgacgtttgactactttattgtattccttaatatatgtgcaattggctaaaacgacattcattctgaaacggagggagtagtt 46046217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 295 - 353
Target Start/End: Complemental strand, 48319975 - 48319917
Alignment:
Q  295 cattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||| |||||| |||||| || |||||||||||||||||||||||||||||||| ||||    
T  48319975 catttcttaatatgtgtgcaattggctaaagcgacactcattttgaaacggaggtagta 48319917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 295 - 353
Target Start/End: Complemental strand, 50349827 - 50349769
Alignment:
Q  295 cattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||||| |||||  || |||||||||| ||||||||||||||||||||||||||    
T  50349827 cattccttaatttgtgttcaattggctaaagcaacactcattttgaaacggagggagta 50349769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 296 - 353
Target Start/End: Complemental strand, 84487 - 84430
Alignment:
Q  296 attccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||||||||||| || || |||||||||||||||||||||||| || ||||||    
T  84487 attccttaatctgtgtgcaattgactaaagcgacactcattttgaaacagatggagta 84430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 255 - 344
Target Start/End: Complemental strand, 44582788 - 44582699
Alignment:
Q  255 tatttcagtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacg 344  Q
    ||||| |||||||||| ||||| |||||||||  | ||| ||||| |||||||||||| || |  ||||||||||||||||||| |||||    
T  44582788 tattttagtaaaattgttatgacatttgactactttatttcattcattaatctgtgtgcaattcactaaagcgacactcattttaaaacg 44582699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 302 - 350
Target Start/End: Original strand, 43755216 - 43755264
Alignment:
Q  302 taatctgtgtgaaaatggctaaagcgacactcattttgaaacggaggga 350  Q
    ||||||||||| || |||||||||||||||||||||| |||||||||||    
T  43755216 taatctgtgtgcaattggctaaagcgacactcattttaaaacggaggga 43755264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 262 - 353
Target Start/End: Original strand, 15573763 - 15573854
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||||||| | |||||||||  | ||| ||||| ||||| |||||| || |||||||| ||||| ||||||||||||| ||| ||||    
T  15573763 gtaaaattgctataacatttgactactttattccattctttaatttgtgtgcaattggctaaaacgacattcattttgaaacgaaggaagta 15573854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 296 - 343
Target Start/End: Complemental strand, 17805813 - 17805766
Alignment:
Q  296 attccttaatctgtgtgaaaatggctaaagcgacactcattttgaaac 343  Q
    ||||||||||||| ||| || |||||||||||||||||||||||||||    
T  17805813 attccttaatctgcgtgcaattggctaaagcgacactcattttgaaac 17805766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 262 - 353
Target Start/End: Original strand, 44108751 - 44108842
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||| ||||| |||| ||||  |  || ||||||||||| |||||| || ||||||||| | |||||||||||||||||| ||||||    
T  44108751 gtaaaattgttatgacatttaactactttgtttcattccttaatatgtgtgcaattggctaaagtgtcactcattttgaaacggatggagta 44108842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 262 - 353
Target Start/End: Complemental strand, 48025255 - 48025164
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||||||  |||||||||||  | ||| |||||| |||| |||||| || ||| |||||||||||  ||||| ||||||||||||||    
T  48025255 gtaaaattgctacaatatttgactactttattccattccataatgtgtgtgcaattggttaaagcgacacctattttaaaacggagggagta 48025164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 353
Target Start/End: Complemental strand, 4471377 - 4471319
Alignment:
Q  295 cattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||| |||||||||| || || || ||||||||||||||||||||||||||||| ||||    
T  4471377 catttcttaatctgtatgcaattgactaaagcgacactcattttgaaacggaggaagta 4471319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 353
Target Start/End: Original strand, 12851914 - 12851972
Alignment:
Q  295 cattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||||||| |||| || |||||||||||||||| ||||| ||||||| ||||||    
T  12851914 cattccttaatctttgtgtaattggctaaagcgacacttattttaaaacggatggagta 12851972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 262 - 352
Target Start/End: Original strand, 15823184 - 15823274
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagt 352  Q
    ||||||||||||||| |||| ||||  | ||| |||| |||||| |||||| || |||||||| ||| ||||||||| ||||| |||||||    
T  15823184 gtaaaattgctatgacatttaactattttattccatttcttaatatgtgtgcaattggctaaaacgatactcattttaaaacgaagggagt 15823274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 345
Target Start/End: Complemental strand, 17919791 - 17919741
Alignment:
Q  295 cattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacgg 345  Q
    ||||| ||||||||| || || |||||||||||||||||||||||||||||    
T  17919791 cattcattaatctgtatgtaattggctaaagcgacactcattttgaaacgg 17919741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 247 - 340
Target Start/End: Original strand, 9333214 - 9333307
Alignment:
Q  247 agtaaggctatttcagtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttga 340  Q
    ||||||| | ||| |||||||||||||||| |||||||||  | ||| ||||||||||||||| |  || ||| |||| ||| |||||||||||    
T  9333214 agtaaggttgttttagtaaaattgctatgacatttgactactttatttcattccttaatctgtatataattggttaaatcgatactcattttga 9333307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 247 - 340
Target Start/End: Original strand, 9356987 - 9357080
Alignment:
Q  247 agtaaggctatttcagtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttga 340  Q
    ||||||| | ||| |||||||||||||||| |||||||||  | ||| ||||||||||||||| |  || ||| |||| ||| |||||||||||    
T  9356987 agtaaggttgttttagtaaaattgctatgacatttgactactttatttcattccttaatctgtatataattggttaaatcgatactcattttga 9357080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 300 - 353
Target Start/End: Complemental strand, 13408299 - 13408246
Alignment:
Q  300 cttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||| |||||| || |||||||| ||||||||||||| ||||||||||||||    
T  13408299 cttaatttgtgtgcaattggctaaaacgacactcattttaaaacggagggagta 13408246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 317 - 353
Target Start/End: Complemental strand, 2458998 - 2458962
Alignment:
Q  317 tggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||| ||||||||||||||||||||||||||||    
T  2458998 tggctaaaacgacactcattttgaaacggagggagta 2458962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 295 - 347
Target Start/End: Complemental strand, 6377256 - 6377204
Alignment:
Q  295 cattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggag 347  Q
    ||||||||||| | |||| || |||||||||||||||||||||| ||||||||    
T  6377256 cattccttaatttatgtgcaattggctaaagcgacactcattttaaaacggag 6377204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 317 - 353
Target Start/End: Complemental strand, 7375279 - 7375243
Alignment:
Q  317 tggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||| ||||||||||||||||||||||||||||    
T  7375279 tggctaaaacgacactcattttgaaacggagggagta 7375243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 317 - 353
Target Start/End: Complemental strand, 27720949 - 27720913
Alignment:
Q  317 tggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||||||||||||||||||||||||| ||||||    
T  27720949 tggctaaagcgacactcattttgaaacggatggagta 27720913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 261 - 349
Target Start/End: Complemental strand, 38530841 - 38530753
Alignment:
Q  261 agtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggaggg 349  Q
    ||||||||||||  || |||||||||  | ||| |||| |||||||||| |  || |||||||||||||||||||||| ||| ||||||    
T  38530841 agtaaaattgctgcgacatttgactactttatttcatttcttaatctgtatataattggctaaagcgacactcattttaaaatggaggg 38530753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 318 - 353
Target Start/End: Original strand, 32807100 - 32807135
Alignment:
Q  318 ggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||| ||||||||||||||||||||||||||||    
T  32807100 ggctaaaacgacactcattttgaaacggagggagta 32807135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 262 - 353
Target Start/End: Complemental strand, 35847937 - 35847846
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||| ||||| |||||||||  | |||  |||||||||| |||||| || ||  |||||||||||||||||  ||||||| ||||||    
T  35847937 gtaaaattgttatgacatttgactactttattcaattccttaatatgtgtgcaattgagtaaagcgacactcatttcaaaacggatggagta 35847846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 262 - 353
Target Start/End: Complemental strand, 43358215 - 43358124
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||||||||| |||||||||  | ||| ||||||||||| | |||  || || ||||| ||||| ||||||| ||||| ||||||||    
T  43358215 gtaaaattgctatgacatttgactattttatttcattccttaatatatgtacaattgactaaaacgacattcattttaaaacgaagggagta 43358124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 531 - 577
Target Start/End: Complemental strand, 5128313 - 5128267
Alignment:
Q  531 caggcccgacctttggggggtgcaaatagctcaatggagctgggcct 577  Q
    |||||||| || |||||||||| ||| ||||||||||||||||||||    
T  5128313 caggcccggcccttggggggtgtaaacagctcaatggagctgggcct 5128267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 295 - 353
Target Start/End: Complemental strand, 15647043 - 15646985
Alignment:
Q  295 cattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||||| |||||| || || ||||| ||||||||||||| |||| |||||||||    
T  15647043 cattccttaatttgtgtgcaattgactaaaacgacactcattttaaaacagagggagta 15646985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 319 - 353
Target Start/End: Original strand, 17919985 - 17920019
Alignment:
Q  319 gctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||||||||||||||| ||||||||||||||    
T  17919985 gctaaagcgacactcattttaaaacggagggagta 17920019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 262 - 344
Target Start/End: Original strand, 25151960 - 25152042
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacg 344  Q
    |||||||| |||||| |||||||||  | |||  |||| |||||||||||| || ||| ||||| |||||| |||||||||||    
T  25151960 gtaaaattactatgacatttgactactttattctattctttaatctgtgtgcaattggttaaagtgacacttattttgaaacg 25152042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 296 - 346
Target Start/End: Original strand, 30006313 - 30006363
Alignment:
Q  296 attccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacgga 346  Q
    |||| |||||||||||| || || ||||||||||| |||||||||||||||    
T  30006313 attcattaatctgtgtgcaattgactaaagcgacattcattttgaaacgga 30006363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 319 - 353
Target Start/End: Original strand, 34032243 - 34032277
Alignment:
Q  319 gctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||||||||||||||||| |||||||||||    
T  34032243 gctaaagcgacactcattttgaagcggagggagta 34032277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 530 - 596
Target Start/End: Complemental strand, 39135129 - 39135063
Alignment:
Q  530 tcaggcccgacctttggggggtgcaaatagctcaatggagctgggccttcccaatgtatgggtctca 596  Q
    ||||| |||| | |||||| ||||||| ||||||||||| |||||||| ||||| ||||||| ||||    
T  39135129 tcagggccgaaccttggggtgtgcaaagagctcaatggaactgggcctccccaaggtatgggcctca 39135063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 319 - 353
Target Start/End: Complemental strand, 43929672 - 43929638
Alignment:
Q  319 gctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||| |||||||||||||||||||||||||||    
T  43929672 gctaaagtgacactcattttgaaacggagggagta 43929638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 319 - 353
Target Start/End: Complemental strand, 44024533 - 44024499
Alignment:
Q  319 gctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||||||||||||||| ||||||||||||||    
T  44024533 gctaaagcgacactcattttaaaacggagggagta 44024499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 319 - 353
Target Start/End: Original strand, 44258672 - 44258706
Alignment:
Q  319 gctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||||||||||||||||||||| ||||||||    
T  44258672 gctaaagcgacactcattttgaaacgaagggagta 44258706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 295 - 353
Target Start/End: Complemental strand, 45377129 - 45377071
Alignment:
Q  295 cattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||| |||||| |||||| || ||| |||| ||||| ||||||||||||||||||||||    
T  45377129 catttcttaatttgtgtgtaattggttaaaacgacaatcattttgaaacggagggagta 45377071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 50350020 - 50350058
Alignment:
Q  317 tggctaaagcgacactcattttgaaacggagggagtagt 355  Q
    ||||||||| || ||||||||||||||||||||||||||    
T  50350020 tggctaaagtgatactcattttgaaacggagggagtagt 50350058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 353
Target Start/End: Complemental strand, 50158263 - 50158230
Alignment:
Q  320 ctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||| |||||||||||||||||||||||||||    
T  50158263 ctaaagtgacactcattttgaaacggagggagta 50158230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 317 - 353
Target Start/End: Original strand, 17806537 - 17806573
Alignment:
Q  317 tggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||| ||||||||||||||||||||| |||||    
T  17806537 tggctaaagtgacactcattttgaaacggagtgagta 17806573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 317 - 353
Target Start/End: Complemental strand, 25487079 - 25487043
Alignment:
Q  317 tggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||||||| || ||||||||||||||||||||    
T  25487079 tggctaaagcgacgctaattttgaaacggagggagta 25487043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 317 - 353
Target Start/End: Original strand, 31491931 - 31491967
Alignment:
Q  317 tggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||| ||||||| ||||||||||||||||||||    
T  31491931 tggctaaaacgacactgattttgaaacggagggagta 31491967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 297 - 353
Target Start/End: Original strand, 33087512 - 33087568
Alignment:
Q  297 ttccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||||||||||| ||  | |||| |||||||||||||| ||||||||| ||||    
T  33087512 ttccttaatctgtgtgcaatcgactaacgcgacactcattttaaaacggaggaagta 33087568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 317 - 349
Target Start/End: Original strand, 38132329 - 38132361
Alignment:
Q  317 tggctaaagcgacactcattttgaaacggaggg 349  Q
    |||||||||||||||||||||||||| ||||||    
T  38132329 tggctaaagcgacactcattttgaaatggaggg 38132361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 262 - 338
Target Start/End: Complemental strand, 40717363 - 40717287
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcatttt 338  Q
    |||||||||||||||||||||||||  | ||| |||||| |||| |||||| || ||  |||| ||||||| |||||    
T  40717363 gtaaaattgctatgatatttgactactttattccattccgtaatatgtgtgcaattgattaaaacgacacttatttt 40717287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 317 - 353
Target Start/End: Complemental strand, 50249300 - 50249264
Alignment:
Q  317 tggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||||||||||||||||| |||| |||||||||    
T  50249300 tggctaaagcgacactcattttaaaacagagggagta 50249264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 8e-26; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 262 - 358
Target Start/End: Complemental strand, 52957797 - 52957701
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagtagttaa 358  Q
    ||||||||||||||| |||||||||  | ||| |||||||||||||||||| || ||||||||||||||||||||||||||||||| ||||| ||||    
T  52957797 gtaaaattgctatgacatttgactactttattccattccttaatctgtgtgcaattggctaaagcgacactcattttgaaacggagtgagtacttaa 52957701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 247 - 353
Target Start/End: Original strand, 47321278 - 47321384
Alignment:
Q  247 agtaaggctatttcagtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacgga 346  Q
    ||||||| ||||| |||||||||||||||| |||||||||  | |||  ||||||||||||||||| || |||||||| ||||||||||||| |||||||    
T  47321278 agtaaggttattttagtaaaattgctatgacatttgactattttattcaattccttaatctgtgtgcaattggctaaaacgacactcattttaaaacgga 47321377  T
Q  347 gggagta 353  Q
    |||||||    
T  47321378 gggagta 47321384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 262 - 354
Target Start/End: Original strand, 37654560 - 37654652
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagtag 354  Q
    ||||||||||||||| |||||||||  | ||| ||||||||||| |||||| || |||||||| |||||||||||||||||||||||||||||    
T  37654560 gtaaaattgctatgacatttgactactttatttcattccttaatatgtgtgcaattggctaaaacgacactcattttgaaacggagggagtag 37654652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 247 - 353
Target Start/End: Original strand, 28116378 - 28116484
Alignment:
Q  247 agtaaggctatttcagtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacgga 346  Q
    ||||||| ||||| |||||||||||||||| |||||||||  | ||| |||||||||||| ||||| || ||| ||||| ||||||||||||||||||||    
T  28116378 agtaaggttattttagtaaaattgctatgacatttgactactttattccattccttaatccgtgtgcaattggttaaagtgacactcattttgaaacgga 28116477  T
Q  347 gggagta 353  Q
     ||||||    
T  28116478 tggagta 28116484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 247 - 353
Target Start/End: Original strand, 34124428 - 34124534
Alignment:
Q  247 agtaaggctatttcagtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacgga 346  Q
    ||||||| ||||| |||||||||| ||||| |||||||||  | |||  ||| ||||||||||||| || ||||||||||||||||||||||||||||||    
T  34124428 agtaaggttattttagtaaaattgttatgacatttgactactttattcaatttcttaatctgtgtgcaattggctaaagcgacactcattttgaaacgga 34124527  T
Q  347 gggagta 353  Q
    || ||||    
T  34124528 ggaagta 34124534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 247 - 346
Target Start/End: Original strand, 45889696 - 45889795
Alignment:
Q  247 agtaaggctatttcagtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacgga 346  Q
    ||||||| ||||| |||||||||||||| | |||||||||  | ||| ||||||||||| |||||| || |||||||| |||||||||||||||||||||    
T  45889696 agtaaggttattttagtaaaattgctataacatttgactactttatttcattccttaatatgtgtgcaattggctaaaacgacactcattttgaaacgga 45889795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 263 - 353
Target Start/End: Original strand, 39984968 - 39985058
Alignment:
Q  263 taaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||||||||| |||||||||  | |||  |||||||||| ||| || || |||||||||||||||||||||||||||||||||||||    
T  39984968 taaaattgctatgacatttgactattttattcaattccttaatatgtatgcaattggctaaagcgacactcattttgaaacggagggagta 39985058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 262 - 343
Target Start/End: Original strand, 27653824 - 27653905
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaac 343  Q
    ||||||||||||||| |||||||||  | ||| ||||||||||| |||||| || |||||||||||||||||||||||||||    
T  27653824 gtaaaattgctatgacatttgactactttattccattccttaatttgtgtgcaattggctaaagcgacactcattttgaaac 27653905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 262 - 353
Target Start/End: Original strand, 2493252 - 2493343
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||||||||| |||||||||  | ||| ||||||||||| |||||| || |||| ||| ||||||||||||||||||||| ||||||    
T  2493252 gtaaaattgctatgacatttgactactttatttcattccttaatatgtgtgcaattggcaaaaacgacactcattttgaaacggatggagta 2493343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 262 - 353
Target Start/End: Complemental strand, 2728405 - 2728314
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||| ||||| |||||||||  | |||  |||||||||| |||||| || |||||||||||||||||||||||||||||| ||||||    
T  2728405 gtaaaattgttatgacatttgactactttattcaattccttaatatgtgtgcaattggctaaagcgacactcattttgaaacggatggagta 2728314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 262 - 353
Target Start/End: Original strand, 18430139 - 18430230
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||| ||||| |||||||||  | ||| ||||||||||| |||||| || |||||||||| ||||||||||||||||||||| ||||    
T  18430139 gtaaaattgttatgacatttgactactttatttcattccttaatatgtgtgcaattggctaaagcaacactcattttgaaacggaggaagta 18430230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 247 - 346
Target Start/End: Complemental strand, 19282429 - 19282330
Alignment:
Q  247 agtaaggctatttcagtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacgga 346  Q
    ||||||| ||||| |||||||||| ||||| |||||||||  | ||| |||||||||||| ||||| || ||||||||||||| |||||||| |||||||    
T  19282429 agtaaggttattttagtaaaattgttatgacatttgactactttattccattccttaatccgtgtgcaattggctaaagcgacgctcattttaaaacgga 19282330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 255 - 350
Target Start/End: Original strand, 54233957 - 54234052
Alignment:
Q  255 tatttcagtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggaggga 350  Q
    ||||| |||||||||| |||||||||||| ||  | ||| |||| |||||| ||| || || ||||||||||||||||||||||||||||||||||    
T  54233957 tattttagtaaaattgatatgatatttgagtactttattccatttcttaatttgtatgcaattggctaaagcgacactcattttgaaacggaggga 54234052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 247 - 353
Target Start/End: Original strand, 6462147 - 6462253
Alignment:
Q  247 agtaaggctatttcagtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacgga 346  Q
    ||||||| ||||| ||| |||||||||||| |||||||||  | ||| | || ||||||||||||| || |||||||| |||| ||||||||||||||||    
T  6462147 agtaaggttattttagtcaaattgctatgaaatttgactactttattacttttcttaatctgtgtgcaattggctaaaacgaccctcattttgaaacgga 6462246  T
Q  347 gggagta 353  Q
     ||||||    
T  6462247 tggagta 6462253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 247 - 353
Target Start/End: Original strand, 55126630 - 55126736
Alignment:
Q  247 agtaaggctatttcagtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacgga 346  Q
    ||||||| ||||| |||||||||||||||| |||||||||  | ||| ||||||||||||  |||| || |||||||| ||||| ||||||| |||||||    
T  55126630 agtaaggttattttagtaaaattgctatgacatttgactactttatttcattccttaatcaatgtgcaattggctaaaacgacattcattttaaaacgga 55126729  T
Q  347 gggagta 353  Q
     ||||||    
T  55126730 tggagta 55126736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 262 - 346
Target Start/End: Complemental strand, 29519532 - 29519448
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacgga 346  Q
    ||||||||| |||||||||||||||  | ||| ||||||||||| |||||| || |||||||| ||||||||||||| |||||||    
T  29519532 gtaaaattgttatgatatttgactattttatttcattccttaatatgtgtgtaattggctaaaacgacactcattttaaaacgga 29519448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 262 - 353
Target Start/End: Original strand, 19878798 - 19878889
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||||||| || |||||| ||  | ||| ||||||||||||| || | || |||||||||||||| ||||||||||||||||||||||    
T  19878798 gtaaaattgctacgacatttgattactttattccattccttaatctctgcgcaattggctaaagcgacattcattttgaaacggagggagta 19878889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 247 - 346
Target Start/End: Original strand, 24259744 - 24259843
Alignment:
Q  247 agtaaggctatttcagtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacgga 346  Q
    ||||||| ||||| |||||||||| ||||| |||||||||  | ||| ||||||||||| | |||| || ||| |||||||||||||||||| |||||||    
T  24259744 agtaaggttattttagtaaaattgttatgacatttgactactttatttcattccttaatatatgtgcaattggataaagcgacactcattttaaaacgga 24259843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 262 - 353
Target Start/End: Complemental strand, 40345354 - 40345263
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||| ||||| |||||||||  | ||| ||||| ||||| |||||| || |||||||||||||| ||||||| ||||||||||||||    
T  40345354 gtaaaattgatatgacatttgactactttatttcattcattaatttgtgtgcaattggctaaagcgacattcattttaaaacggagggagta 40345263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 255 - 353
Target Start/End: Complemental strand, 17499728 - 17499630
Alignment:
Q  255 tatttcagtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||| |||||||||| ||||| |||||||||  | ||| ||||| |||||||||||| || || ||||| ||||||||||||| |||||||| |||||    
T  17499728 tattttagtaaaattgttatgacatttgactattttatttcattcattaatctgtgtgcaattgactaaaacgacactcattttaaaacggagagagta 17499630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 262 - 352
Target Start/End: Complemental strand, 49080484 - 49080394
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagt 352  Q
    |||||||| |||||| |||||||||  | |||  |||||||||| |||||| || ||| |||||||||||| |||||||||||||||||||    
T  49080484 gtaaaattactatgacatttgactactttattttattccttaatatgtgtgcaattggataaagcgacacttattttgaaacggagggagt 49080394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 262 - 355
Target Start/End: Original strand, 1819712 - 1819805
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagtagt 355  Q
    ||||||||||||||| |||||||||  | ||| ||||| |||||||||||  || || ||||||||||| ||||||| ||||||||| ||||||    
T  1819712 gtaaaattgctatgacatttgactactttatttcattctttaatctgtgttcaattgactaaagcgacattcattttaaaacggaggaagtagt 1819805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 262 - 355
Target Start/End: Complemental strand, 52848061 - 52847968
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagtagt 355  Q
    ||||||||||||||| |||||||||  | |||  ||| |||||||||| || || |||||||| | ||||||||||| ||||||||||||||||    
T  52848061 gtaaaattgctatgacatttgactactttattcaatttcttaatctgtatgcaattggctaaaacaacactcattttaaaacggagggagtagt 52847968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 296 - 353
Target Start/End: Complemental strand, 56556251 - 56556194
Alignment:
Q  296 attccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||||||||||| || ||| |||||||||||||||||| ||||||||||||||    
T  56556251 attccttaatctgtgtgcaattggttaaagcgacactcattttaaaacggagggagta 56556194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 262 - 346
Target Start/End: Complemental strand, 40010879 - 40010795
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacgga 346  Q
    ||||||||||||||| |||||||||  | ||| ||||||||||| |||||| ||  | ||||| |||||||||||||||||||||    
T  40010879 gtaaaattgctatgacatttgactactttattccattccttaatatgtgtgtaatggactaaaacgacactcattttgaaacgga 40010795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 263 - 355
Target Start/End: Original strand, 50623235 - 50623327
Alignment:
Q  263 taaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagtagt 355  Q
    |||||||| ||||| |||||||||    ||| ||||||||||| |||||| || || ||||| ||||||||||||| ||||||||||||||||    
T  50623235 taaaattgatatgacatttgactactctatttcattccttaatatgtgtgtaattgactaaaacgacactcattttaaaacggagggagtagt 50623327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 295 - 354
Target Start/End: Original strand, 30492899 - 30492958
Alignment:
Q  295 cattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagtag 354  Q
    ||||||||||| |||||| || |||||||| | |||||||||||||||||||||||||||    
T  30492899 cattccttaatttgtgtgcaattggctaaaaccacactcattttgaaacggagggagtag 30492958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 278 - 353
Target Start/End: Original strand, 34316386 - 34316461
Alignment:
Q  278 atttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||||  | ||| |||||||||||||||||| || ||| ||||| ||||||||||||||||||||| |||||    
T  34316386 atttgactattttatttcattccttaatctgtgtgcaattggttaaagtgacactcattttgaaacggagtgagta 34316461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 262 - 353
Target Start/End: Complemental strand, 53814504 - 53814413
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||||||||| |||||||||  | ||| ||||||||||| ||||||  | ||| |||| ||||||||||||| ||||||| ||||||    
T  53814504 gtaaaattgctatgacatttgactactttatttcattccttaatatgtgtgcgattggttaaaacgacactcattttaaaacggatggagta 53814413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 262 - 353
Target Start/End: Complemental strand, 56373582 - 56373491
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||||||| || |||||||||  | ||| ||||||||||| ||| |  || ||||||||| |||||||||||||||||||| ||||||    
T  56373582 gtaaaattgctacgacatttgactactttattccattccttaatatgtcttcaattggctaaagtgacactcattttgaaacggatggagta 56373491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 531 - 589
Target Start/End: Original strand, 17353605 - 17353663
Alignment:
Q  531 caggcccgacctttggggggtgcaaatagctcaatggagctgggccttcccaatgtatg 589  Q
    ||||||| ||| |||||||||||||| ||||||||||||||| |||| |||||||||||    
T  17353605 caggcccaacccttggggggtgcaaacagctcaatggagctgagcctccccaatgtatg 17353663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 295 - 353
Target Start/End: Original strand, 29840234 - 29840292
Alignment:
Q  295 cattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||||| |||||| || ||| |||| ||||||||||||||||||||||||||||    
T  29840234 cattccttaatttgtgtgcaattgggtaaaacgacactcattttgaaacggagggagta 29840292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 261 - 338
Target Start/End: Original strand, 49089612 - 49089689
Alignment:
Q  261 agtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcatttt 338  Q
    |||||||||| ||||||||||||||| || ||| ||||||||||| |||||| || ||  |||| |||||||||||||    
T  49089612 agtaaaattgttatgatatttgactacattatttcattccttaatatgtgtgcaattgattaaaacgacactcatttt 49089689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 317 - 353
Target Start/End: Original strand, 31941758 - 31941794
Alignment:
Q  317 tggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||||||||||||||||||||||||||||||||    
T  31941758 tggctaaagcgacactcattttgaaacggagggagta 31941794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 262 - 354
Target Start/End: Complemental strand, 41920316 - 41920224
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagtag 354  Q
    ||||||||||||| | ||| |||||  ||||| ||||| ||||| |||||| || | ||||||  |||||| |||||||||||||||||||||    
T  41920316 gtaaaattgctattacattcgactacttgattccattctttaatatgtgtgcaattagctaaaatgacacttattttgaaacggagggagtag 41920224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 247 - 355
Target Start/End: Complemental strand, 51434276 - 51434168
Alignment:
Q  247 agtaaggctatttcagtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacgga 346  Q
    ||||||| ||||| | |||||||| ||||| |||||||||  | ||| ||||||||||| | | || || ||| |||||||||| ||||||| |||||||    
T  51434276 agtaaggttattttaataaaattgttatgaaatttgactactttattccattccttaatatatatgcaattggttaaagcgacattcattttaaaacgga 51434177  T
Q  347 gggagtagt 355  Q
    || ||||||    
T  51434176 ggaagtagt 51434168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 245 - 344
Target Start/End: Complemental strand, 4408198 - 4408099
Alignment:
Q  245 atagtaaggctatttcagtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacg 344  Q
    ||||||||| ||||| |||||||||| ||||| | |||||||  | ||| ||||||||||| | |||| || | | |||||||||| |||||||||||||    
T  4408198 atagtaaggttattttagtaaaattgttatgacacttgactactttatttcattccttaatttatgtgcaattagttaaagcgacattcattttgaaacg 4408099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 546 - 597
Target Start/End: Original strand, 24404213 - 24404264
Alignment:
Q  546 gggggtgcaaatagctcaatggagctgggccttcccaatgtatgggtctcat 597  Q
    ||||||||||| |||||||||||||||||||| ||||| ||||||| |||||    
T  24404213 gggggtgcaaacagctcaatggagctgggcctccccaaggtatgggcctcat 24404264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 262 - 349
Target Start/End: Original strand, 24941030 - 24941117
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggaggg 349  Q
    ||||||||| ||||| |||||||||  | ||| ||||| ||||  |||||| || ||| |||| ||||||||||||||||||||||||    
T  24941030 gtaaaattgttatgacatttgactactttattccattctttaacatgtgtgcaattggttaaaacgacactcattttgaaacggaggg 24941117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 262 - 353
Target Start/End: Complemental strand, 38991770 - 38991679
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||| ||||| |||| ||||  | ||| |||| ||||||||||||| || || ||||| ||||||||||||| ||||||||| ||||    
T  38991770 gtaaaattgttatgacatttaactactttattacatttcttaatctgtgtgcaattgactaaaacgacactcattttaaaacggaggaagta 38991679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 262 - 353
Target Start/End: Original strand, 42605722 - 42605813
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||||||||| |||||||||  | |||  |||| |||||||||||| || || ||||| |||| |||||||| |||||||| |||||    
T  42605722 gtaaaattgctatgacatttgactattttattttattctttaatctgtgtgcaattgactaaaacgacgctcattttaaaacggagtgagta 42605813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 262 - 353
Target Start/End: Complemental strand, 45043595 - 45043504
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||||||||| |||||||||  | ||| ||||||||||  |||||| || || ||||| ||||||| |||||||||| ||| |||||    
T  45043595 gtaaaattgctatgacatttgactactttattacattccttaaaatgtgtgcaattgactaaaacgacacttattttgaaacagagagagta 45043504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 353
Target Start/End: Complemental strand, 4505325 - 4505291
Alignment:
Q  319 gctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||||||||||||||||||||||||||||||    
T  4505325 gctaaagcgacactcattttgaaacggagggagta 4505291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 262 - 355
Target Start/End: Original strand, 20448189 - 20448280
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagtagt 355  Q
    ||||||||||||||| |||| ||||  | |||  |||||||||| |||||| || ||||||||||||||  ||||||||||| ||| |||||||    
T  20448189 gtaaaattgctatgacatttaactactttattcaattccttaatatgtgtgcaattggctaaagcgaca--cattttgaaacagagagagtagt 20448280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 32140855 - 32140798
Alignment:
Q  289 tgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacgga 346  Q
    ||||| ||||||||||| |||||| || || ||||| |||||||||||||||||||||    
T  32140855 tgatttcattccttaatttgtgtgcaattgactaaaacgacactcattttgaaacgga 32140798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 320 - 353
Target Start/End: Original strand, 50072458 - 50072491
Alignment:
Q  320 ctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||||||||||||||||||||||||||||    
T  50072458 ctaaagcgacactcattttgaaacggagggagta 50072491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 295 - 346
Target Start/End: Original strand, 21045312 - 21045361
Alignment:
Q  295 cattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacgga 346  Q
    ||||||||||||||||| |||  | |||||||||||||||||||||||||||    
T  21045312 cattccttaatctgtgtcaaa--gcctaaagcgacactcattttgaaacgga 21045361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 317 - 353
Target Start/End: Complemental strand, 47817726 - 47817690
Alignment:
Q  317 tggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||| ||||||||||||||||||||||||||||    
T  47817726 tggctaaaacgacactcattttgaaacggagggagta 47817690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 291 - 358
Target Start/End: Original strand, 4505504 - 4505571
Alignment:
Q  291 attgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagtagttaa 358  Q
    |||||||| |||||| ||| || |||   ||||| || ||||||||||||||||||||||||||||||    
T  4505504 attgcatttcttaatatgtttgtaaacacctaaaacggcactcattttgaaacggagggagtagttaa 4505571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 262 - 350
Target Start/End: Original strand, 29370753 - 29370837
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggaggga 350  Q
    ||||||||||||||| |||||||||  | ||| ||||||||||| |||||| || || ||||    |||||||| ||||||||||||||    
T  29370753 gtaaaattgctatgacatttgactactttatttcattccttaatatgtgtgcaattgactaa----acactcatcttgaaacggaggga 29370837  T

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Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 319 - 354
Target Start/End: Complemental strand, 37624545 - 37624510
Alignment:
Q  319 gctaaagcgacactcattttgaaacggagggagtag 354  Q
    ||||||||| ||||||||||||||||||||||||||    
T  37624545 gctaaagcgtcactcattttgaaacggagggagtag 37624510  T

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Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 263 - 353
Target Start/End: Complemental strand, 54042189 - 54042098
Alignment:
Q  263 taaaattgctatgatatttgactaaatgattgcattccttaatc-tgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||||| || |||||||||  | ||| |||| ||||||  |||||| || |||||||| ||||||||||||| ||||||| ||||||    
T  54042189 taaaattgctacgacatttgactattttattccatttcttaattatgtgtgcaattggctaaaacgacactcattttaaaacggatggagta 54042098  T

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Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 300 - 347
Target Start/End: Complemental strand, 56422967 - 56422920
Alignment:
Q  300 cttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggag 347  Q
    |||||||||||||  || | ||||||||||||||||||||||||||||    
T  56422967 cttaatctgtgtgtcaaagcctaaagcgacactcattttgaaacggag 56422920  T

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Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 291 - 353
Target Start/End: Complemental strand, 7905985 - 7905923
Alignment:
Q  291 attgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||| |||||| |||||| |||   ||||| ||||||||||||| ||||||||||||||    
T  7905985 attgcatttcttaatatgtgtgtaaacacctaaaacgacactcattttaaaacggagggagta 7905923  T

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Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 295 - 353
Target Start/End: Original strand, 22212520 - 22212578
Alignment:
Q  295 cattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||||| |||||  || ||||||||||||||| |||||| ||||||| ||||||    
T  22212520 cattccttaatatgtgttcaattggctaaagcgacacccattttaaaacggatggagta 22212578  T

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Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 319 - 353
Target Start/End: Complemental strand, 49089449 - 49089415
Alignment:
Q  319 gctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||| ||||||||||||||||||||||||||||    
T  49089449 gctaaaacgacactcattttgaaacggagggagta 49089415  T

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Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 346
Target Start/End: Complemental strand, 28116232 - 28116203
Alignment:
Q  317 tggctaaagcgacactcattttgaaacgga 346  Q
    ||||||||||||||||||||||||||||||    
T  28116232 tggctaaagcgacactcattttgaaacgga 28116203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 317 - 353
Target Start/End: Complemental strand, 29840062 - 29840026
Alignment:
Q  317 tggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||| |||| ||||||||||||||||||||||    
T  29840062 tggctaaagtgacagtcattttgaaacggagggagta 29840026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 295 - 355
Target Start/End: Complemental strand, 31817172 - 31817112
Alignment:
Q  295 cattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagtagt 355  Q
    |||| |||||| ||||||  || | ||||||||||||| |||||||||| |||||||||||    
T  31817172 catttcttaatttgtgtgtcaaagcctaaagcgacactaattttgaaacagagggagtagt 31817112  T

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Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 317 - 353
Target Start/End: Original strand, 31817339 - 31817375
Alignment:
Q  317 tggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||| | |||||||||||||||||||||||||||    
T  31817339 tggctaatgtgacactcattttgaaacggagggagta 31817375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 321 - 353
Target Start/End: Original strand, 32141132 - 32141164
Alignment:
Q  321 taaagcgacactcattttgaaacggagggagta 353  Q
    |||| ||||||||||||||||||||||||||||    
T  32141132 taaaacgacactcattttgaaacggagggagta 32141164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 255 - 351
Target Start/End: Complemental strand, 34534104 - 34534008
Alignment:
Q  255 tatttcagtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggag 351  Q
    ||||| |||||||||||||||| |||||| ||  | |||  ||||||||||||| ||| || | ||||||  |||||| ||||||||| ||| ||||    
T  34534104 tattttagtaaaattgctatgacatttgattactttattcaattccttaatctgagtgcaattagctaaaatgacacttattttgaaagggaaggag 34534008  T

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Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 321 - 353
Target Start/End: Original strand, 44855449 - 44855481
Alignment:
Q  321 taaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||| |||||||||||||||||||||||    
T  44855449 taaagcgacgctcattttgaaacggagggagta 44855481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 317 - 353
Target Start/End: Complemental strand, 52253835 - 52253799
Alignment:
Q  317 tggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||| ||||| ||||||||||||||||||||||    
T  52253835 tggctaaaacgacattcattttgaaacggagggagta 52253799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 317 - 353
Target Start/End: Original strand, 52915709 - 52915745
Alignment:
Q  317 tggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  52915709 tggctaaagcgacactcattttgaatcggatggagta 52915745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 319 - 347
Target Start/End: Original strand, 56555873 - 56555901
Alignment:
Q  319 gctaaagcgacactcattttgaaacggag 347  Q
    |||||||||||||||||||||||||||||    
T  56555873 gctaaagcgacactcattttgaaacggag 56555901  T

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Target: chr2 (Bit Score: 61; Significance: 8e-26; HSPs: 58)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 242 - 354
Target Start/End: Original strand, 38809828 - 38809940
Alignment:
Q  242 aaaatagtaaggctatttcagtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaa 341  Q
    |||||||||||||||||| |||||||||||||||| ||||||| |  | ||| | |||||||||||||||| || |||||||| ||| ||||||||||||    
T  38809828 aaaatagtaaggctattttagtaaaattgctatgacatttgaccactttattcctttccttaatctgtgtgcaattggctaaaacgatactcattttgaa 38809927  T
Q  342 acggagggagtag 354  Q
    | |||||||||||    
T  38809928 atggagggagtag 38809940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 262 - 353
Target Start/End: Original strand, 4133172 - 4133263
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||||||||| |||||||||  | ||| ||||||||||| |||||| || |||||||||||||||||||||||||||||||||||||    
T  4133172 gtaaaattgctatgacatttgactactttattccattccttaatatgtgtgcaattggctaaagcgacactcattttgaaacggagggagta 4133263  T

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Target: chr2; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 247 - 353
Target Start/End: Original strand, 14698124 - 14698230
Alignment:
Q  247 agtaaggctatttcagtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacgga 346  Q
    ||||||| ||||| |||||||||||||||| |||||||||  | |||  ||| ||||||||||||| || |||||||||||||||||||||||||||| |    
T  14698124 agtaaggttattttagtaaaattgctatgacatttgactactttattcaatttcttaatctgtgtgcaattggctaaagcgacactcattttgaaacgaa 14698223  T
Q  347 gggagta 353  Q
    |||||||    
T  14698224 gggagta 14698230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 247 - 353
Target Start/End: Original strand, 25332706 - 25332812
Alignment:
Q  247 agtaaggctatttcagtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacgga 346  Q
    ||||||| ||||| |||||||||||||||| |||||||||  | |||  ||||||||||||||||| || | |||||||||||||||||||| |||||||    
T  25332706 agtaaggttattttagtaaaattgctatgacatttgactactttattcaattccttaatctgtgtgcaattagctaaagcgacactcattttaaaacgga 25332805  T
Q  347 gggagta 353  Q
    |||||||    
T  25332806 gggagta 25332812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 247 - 353
Target Start/End: Complemental strand, 43388675 - 43388569
Alignment:
Q  247 agtaaggctatttcagtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacgga 346  Q
    ||||||| ||||| |||||||||| ||||| |||||||||  | |||  ||| ||||||||||||| || ||||||||||||||||||||||||||||||    
T  43388675 agtaaggttattttagtaaaattgttatgacatttgactactttattcaatttcttaatctgtgtgcaattggctaaagcgacactcattttgaaacgga 43388576  T
Q  347 gggagta 353  Q
    |||||||    
T  43388575 gggagta 43388569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 262 - 353
Target Start/End: Complemental strand, 441234 - 441143
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||||||||| |||||||||  | ||| ||||||||||| |||||| || |||||||| ||||||||||||||||||||||||||||    
T  441234 gtaaaattgctatgacatttgactactttattccattccttaatttgtgtgcaattggctaaaacgacactcattttgaaacggagggagta 441143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 262 - 353
Target Start/End: Complemental strand, 25383488 - 25383397
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||||||||||||||||||||  | ||| ||||||||||| || ||| || |||||||||||||||||||||| ||||||| ||||||    
T  25383488 gtaaaattgctatgatatttgactactttattccattccttaatttgcgtgcaattggctaaagcgacactcattttaaaacggatggagta 25383397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 262 - 353
Target Start/End: Complemental strand, 29396683 - 29396592
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||||||| || |||||||||  | ||| |||||||||||||||||| || |||||||| |||||||||||||||||| |||||||||    
T  29396683 gtaaaattgctacgacatttgactactttatttcattccttaatctgtgtgcaattggctaaaacgacactcattttgaaacagagggagta 29396592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 262 - 355
Target Start/End: Original strand, 29808963 - 29809056
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagtagt 355  Q
    |||||||||||| || |||||||||  | ||| ||||||||||| |||||| || ||||||||||||||||||||||||||| || ||||||||    
T  29808963 gtaaaattgctacgacatttgactactttatttcattccttaatttgtgtgcaattggctaaagcgacactcattttgaaacagatggagtagt 29809056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 249 - 353
Target Start/End: Complemental strand, 4566137 - 4566033
Alignment:
Q  249 taaggctatttcagtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagg 348  Q
    ||||| ||||| |||||||||| |||||||||||||||  | ||| ||||  |||||||||||| || || ||||||||||||||||||| ||||||||     
T  4566137 taaggttattttagtaaaattgttatgatatttgactattttattacattttttaatctgtgtgtaattgactaaagcgacactcattttaaaacggaga 4566038  T
Q  349 gagta 353  Q
    |||||    
T  4566037 gagta 4566033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 263 - 355
Target Start/End: Complemental strand, 16807519 - 16807427
Alignment:
Q  263 taaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagtagt 355  Q
    |||||||| ||||| |||||||||  | ||| ||||| ||||| |||||| || |||||||||||||||||||||| ||||||||||||||||    
T  16807519 taaaattgttatgacatttgactactttattccattcattaatatgtgtgcaattggctaaagcgacactcattttaaaacggagggagtagt 16807427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 263 - 355
Target Start/End: Complemental strand, 16846800 - 16846708
Alignment:
Q  263 taaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagtagt 355  Q
    |||||||| ||||| |||||||||  | ||| ||||| ||||| |||||| || |||||||||||||||||||||| ||||||||||||||||    
T  16846800 taaaattgttatgacatttgactactttattccattcattaatatgtgtgcaattggctaaagcgacactcattttaaaacggagggagtagt 16846708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 247 - 338
Target Start/End: Complemental strand, 39866689 - 39866597
Alignment:
Q  247 agtaaggctatttcagtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtg-aaaatggctaaagcgacactcatttt 338  Q
    ||||||| ||||| |||||||||||||||| |||||||||  | ||| |||||||||||||||||| ||| ||| |||| |||||||||||||    
T  39866689 agtaaggttattttagtaaaattgctatgacatttgactactttattccattccttaatctgtgtgcaaattggttaaaacgacactcatttt 39866597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 262 - 353
Target Start/End: Original strand, 42743178 - 42743267
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||||||||| |||||||||  | ||| ||||||||||||  |||| || |||||||||||||||||||||| ||| ||||||||||    
T  42743178 gtaaaattgctatgacatttgactactttatttcattccttaatc--tgtgcaattggctaaagcgacactcattttaaaatggagggagta 42743267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 530 - 597
Target Start/End: Original strand, 30175518 - 30175585
Alignment:
Q  530 tcaggcccgacctttggggggtgcaaatagctcaatggagctgggccttcccaatgtatgggtctcat 597  Q
    ||||||||| || |||||||||||||| |||||||||||||||||||| ||||| ||||||| |||||    
T  30175518 tcaggcccggcccttggggggtgcaaacagctcaatggagctgggcctccccaaggtatgggcctcat 30175585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 296 - 346
Target Start/End: Original strand, 7743584 - 7743634
Alignment:
Q  296 attccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacgga 346  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  7743584 attctttaatctgtgtgaaattggctaaagcgacactcattttgaaacgga 7743634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 531 - 597
Target Start/End: Complemental strand, 21190992 - 21190926
Alignment:
Q  531 caggcccgacctttggggggtgcaaatagctcaatggagctgggccttcccaatgtatgggtctcat 597  Q
    |||||||| || |||||||||||||| |||||||||||||||||||| ||||| ||||||| |||||    
T  21190992 caggcccggcccttggggggtgcaaacagctcaatggagctgggcctccccaaggtatgggcctcat 21190926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 262 - 355
Target Start/End: Original strand, 30855255 - 30855348
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagtagt 355  Q
    ||||||||| || || |||||||||  | |||  |||||||||| || ||| || ||| |||||||||||||||||||||||||||||||||||    
T  30855255 gtaaaattgttaagacatttgactattttattcaattccttaatatgcgtgcaattggttaaagcgacactcattttgaaacggagggagtagt 30855348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 529 - 659
Target Start/End: Complemental strand, 36949352 - 36949224
Alignment:
Q  529 gtcaggcccgacct-ttggggggtgcaaatagctcaatggagctgggccttcccaatgtatgggtctcatnnnnnnnnnttatagcccagttaataagta 627  Q
    |||||||||||||  |||||||||||||| |||||||||||||||||||||||||| ||| ||| || |          |||||||||||| | ||||||    
T  36949352 gtcaggcccgaccccttggggggtgcaaacagctcaatggagctgggccttcccaaggtacgggcctaa---aaaaaaattatagcccagtaattaagta 36949256  T
Q  628 ataaatatagagatttacttttcccagcctat 659  Q
    ||||||| ||||  |||||||||||| |||||    
T  36949255 ataaataaagagtattacttttcccaccctat 36949224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 262 - 346
Target Start/End: Original strand, 42753897 - 42753981
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacgga 346  Q
    ||||||||||||||| ||||| |||  | ||| ||||| ||||| |||||| || |||||||||||||| |||||||||||||||    
T  42753897 gtaaaattgctatgacatttgtctactttatttcattctttaatatgtgtgtaattggctaaagcgacagtcattttgaaacgga 42753981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 262 - 353
Target Start/End: Original strand, 12342243 - 12342334
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||| ||||| |||||||||  | ||| |||||||||||   |||| || |||||||| ||||||||||||| ||||||||||||||    
T  12342243 gtaaaattgttatgacatttgactactttatttcattccttaataaatgtgcaattggctaaaacgacactcattttaaaacggagggagta 12342334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 295 - 346
Target Start/End: Original strand, 34225932 - 34225983
Alignment:
Q  295 cattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacgga 346  Q
    ||||||||||||| |||| || ||||||||||||||||||||||||||||||    
T  34225932 cattccttaatctatgtgcaattggctaaagcgacactcattttgaaacgga 34225983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 249 - 347
Target Start/End: Complemental strand, 775900 - 775802
Alignment:
Q  249 taaggctatttcagtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggag 347  Q
    ||||| ||||| |||||||||| ||||| |||||||||  | |||  |||||||||||||| || || |||||||||||||| ||||||| ||| ||||    
T  775900 taaggttattttagtaaaattgttatgacatttgactactttattctattccttaatctgtatgcaattggctaaagcgacattcattttaaaagggag 775802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 543 - 597
Target Start/End: Complemental strand, 45156401 - 45156347
Alignment:
Q  543 ttggggggtgcaaatagctcaatggagctgggccttcccaatgtatgggtctcat 597  Q
    |||||||||||||| |||||||||||||||||||| ||||| ||||||| |||||    
T  45156401 ttggggggtgcaaacagctcaatggagctgggcctccccaaggtatgggcctcat 45156347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 262 - 353
Target Start/End: Original strand, 8774202 - 8774293
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||| ||||| |||||||||  | ||| ||||||||||| |||||| || || ||||| | ||||||||||| ||||||| ||||||    
T  8774202 gtaaaattgttatgacatttgactattttattacattccttaatatgtgtgcaattgactaaaacaacactcattttaaaacggatggagta 8774293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 262 - 353
Target Start/End: Complemental strand, 8789433 - 8789342
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||| ||||| |||||||||  | ||| ||||||||||| |||||| || || ||||| | ||||||||||| ||||||| ||||||    
T  8789433 gtaaaattgttatgacatttgactattttatttcattccttaatatgtgtgcaattgtctaaaacaacactcatttttaaacggatggagta 8789342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 262 - 353
Target Start/End: Original strand, 18717226 - 18717317
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||| ||||  ||||||||| || ||| ||||| ||| |||||||| || | |||||| |||||||| ||||||||||||| |||||    
T  18717226 gtaaaattgttatggcatttgactacattatttcattcattagtctgtgtgcaattagctaaaacgacactctttttgaaacggagagagta 18717317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 17695987 - 17696025
Alignment:
Q  317 tggctaaagcgacactcattttgaaacggagggagtagt 355  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  17695987 tggctaaagcgacactcattttgaaacgaagggagtagt 17696025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 262 - 348
Target Start/End: Complemental strand, 32228014 - 32227928
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagg 348  Q
    ||||||||| ||||| |||||| ||  | ||| ||||||||||| |||||| || ||||||||||||  || |||||||||||||||    
T  32228014 gtaaaattgttatgacatttgaatactttatttcattccttaatttgtgtgcaattggctaaagcgatgcttattttgaaacggagg 32227928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 34225764 - 34225726
Alignment:
Q  317 tggctaaagcgacactcattttgaaacggagggagtagt 355  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  34225764 tggctaaagcgacactcattttgaaacgaagggagtagt 34225726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 353
Target Start/End: Complemental strand, 40987252 - 40987194
Alignment:
Q  295 cattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||||| |||||| ||   |||||||||||||||||||| ||||||||||||||    
T  40987252 cattccttaatatgtgtgcaatgagctaaagcgacactcattttaaaacggagggagta 40987194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 263 - 344
Target Start/End: Complemental strand, 10580858 - 10580777
Alignment:
Q  263 taaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacg 344  Q
    ||||||||| ||||||||||||||  | ||| |||||||| ||| ||||| || ||||| || ||| |||||||||||||||    
T  10580858 taaaattgcgatgatatttgactattttattccattccttgatccgtgtgcaattggcttaaacgatactcattttgaaacg 10580777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 262 - 339
Target Start/End: Original strand, 38926756 - 38926833
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttg 339  Q
    ||||||||| ||||| |||||||||  | ||| ||||| ||||| |||||| || || ||||||||||||||||||||    
T  38926756 gtaaaattgttatgacatttgactactttatttcattcattaatatgtgtgcaattgactaaagcgacactcattttg 38926833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 321 - 353
Target Start/End: Original strand, 1298946 - 1298978
Alignment:
Q  321 taaagcgacactcattttgaaacggagggagta 353  Q
    |||||||||||||||||||||||||||||||||    
T  1298946 taaagcgacactcattttgaaacggagggagta 1298978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 317 - 353
Target Start/End: Complemental strand, 4133014 - 4132978
Alignment:
Q  317 tggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||| ||||||||||||||||||||||||||||    
T  4133014 tggctaaaacgacactcattttgaaacggagggagta 4132978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 317 - 353
Target Start/End: Complemental strand, 4536564 - 4536528
Alignment:
Q  317 tggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||| |||||||||||||||||||||||||||    
T  4536564 tggctaaagtgacactcattttgaaacggagggagta 4536528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 549 - 597
Target Start/End: Original strand, 25192772 - 25192820
Alignment:
Q  549 ggtgcaaatagctcaatggagctgggccttcccaatgtatgggtctcat 597  Q
    ||||||||||||||||||||||| ||||| || || |||||||||||||    
T  25192772 ggtgcaaatagctcaatggagctaggcctccctaaggtatgggtctcat 25192820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 295 - 358
Target Start/End: Complemental strand, 4766187 - 4766124
Alignment:
Q  295 cattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagtagttaa 358  Q
    |||| ||||||||||||   || ||||||||||||| ||||||| ||||||| |||||||||||    
T  4766187 catttcttaatctgtgtaccaaaggctaaagcgacattcattttaaaacggaaggagtagttaa 4766124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 278 - 353
Target Start/End: Complemental strand, 36106390 - 36106315
Alignment:
Q  278 atttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||||  | ||| ||||||||||| ||| || || | |||||||||||||||||||| |||||||| |||||    
T  36106390 atttgactactttatttcattccttaatatgtatgcaatttgctaaagcgacactcattttaaaacggagtgagta 36106315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 291 - 353
Target Start/End: Complemental strand, 681741 - 681679
Alignment:
Q  291 attgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||| |||||| |||||| |||   || || ||||||||||||||||||||||||||||    
T  681741 attgcatttcttaatatgtgtgcaaaaaccttaaacgacactcattttgaaacggagggagta 681679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 319 - 353
Target Start/End: Original strand, 14378387 - 14378421
Alignment:
Q  319 gctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||||||||||||||||||||||| ||||||    
T  14378387 gctaaagcgacactcattttgaaacggaaggagta 14378421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 319 - 353
Target Start/End: Original strand, 18374929 - 18374963
Alignment:
Q  319 gctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||||| ||||||||||||||||||||||||    
T  18374929 gctaaagcgaaactcattttgaaacggagggagta 18374963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 319 - 353
Target Start/End: Original strand, 27964538 - 27964572
Alignment:
Q  319 gctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||| ||||||||||||||||||||||||||||    
T  27964538 gctaaaacgacactcattttgaaacggagggagta 27964572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 319 - 353
Target Start/End: Complemental strand, 37724235 - 37724201
Alignment:
Q  319 gctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||||||||||||||| ||||||||||||||    
T  37724235 gctaaagcgacactcattttaaaacggagggagta 37724201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 295 - 353
Target Start/End: Original strand, 40410625 - 40410683
Alignment:
Q  295 cattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||| |||||||||||||| || | ||||||||||||| ||||| |||||||| |||||    
T  40410625 catttcttaatctgtgtgacaacgcctaaagcgacacttattttaaaacggagagagta 40410683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 291 - 353
Target Start/End: Original strand, 42970067 - 42970129
Alignment:
Q  291 attgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||||||||| | |||| || |||||||| ||||||| ||||| ||||||| ||||||    
T  42970067 attgcattccttaatatatgtgcaattggctaaaacgacacttattttaaaacggaaggagta 42970129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 321 - 355
Target Start/End: Original strand, 45148121 - 45148155
Alignment:
Q  321 taaagcgacactcattttgaaacggagggagtagt 355  Q
    ||||| |||||||||||||||||||||||||||||    
T  45148121 taaagtgacactcattttgaaacggagggagtagt 45148155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 352
Target Start/End: Original strand, 776048 - 776081
Alignment:
Q  319 gctaaagcgacactcattttgaaacggagggagt 352  Q
    |||||||||||||||||||||||||||| |||||    
T  776048 gctaaagcgacactcattttgaaacggatggagt 776081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 353
Target Start/End: Complemental strand, 1298725 - 1298692
Alignment:
Q  320 ctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||||||||||||||||||||||| ||||    
T  1298725 ctaaagcgacactcattttgaaacggaggaagta 1298692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 353
Target Start/End: Complemental strand, 14378217 - 14378160
Alignment:
Q  296 attccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||| |||| ||||||| || | |||||||||||||||||||| |||||||| |||||    
T  14378217 attcattaaactgtgtgcaattagctaaagcgacactcattttaaaacggagagagta 14378160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 353
Target Start/End: Original strand, 29396846 - 29396879
Alignment:
Q  320 ctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||||||||||||||||| ||||||||||    
T  29396846 ctaaagcgacactcattttgaaatggagggagta 29396879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 354
Target Start/End: Original strand, 34546497 - 34546530
Alignment:
Q  321 taaagcgacactcattttgaaacggagggagtag 354  Q
    |||| |||||||||||||||||||||||||||||    
T  34546497 taaaacgacactcattttgaaacggagggagtag 34546530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 353
Target Start/End: Original strand, 44228654 - 44228707
Alignment:
Q  301 ttaatctgtgtgaaaat-ggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||| ||||| |||| ||||||||||||| ||||||| ||||||||||||||    
T  44228654 ttaatccgtgtgcaaattggctaaagcgacattcattttaaaacggagggagta 44228707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 317 - 353
Target Start/End: Original strand, 441395 - 441431
Alignment:
Q  317 tggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||| ||||||| ||||||||||||||||||||    
T  441395 tggctaaaacgacacttattttgaaacggagggagta 441431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 293 - 353
Target Start/End: Complemental strand, 17695808 - 17695748
Alignment:
Q  293 tgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||| |||||| |||||| |||   ||||| |||||||||||||||||||||| |||||    
T  17695808 tgcatttcttaatatgtgtgtaaacatctaaaacgacactcattttgaaacggagagagta 17695748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 317 - 353
Target Start/End: Complemental strand, 38809603 - 38809567
Alignment:
Q  317 tggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||| ||||||||||||||||| ||||||||||    
T  38809603 tggctaaaacgacactcattttgaaatggagggagta 38809567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 317 - 353
Target Start/End: Original strand, 43388819 - 43388855
Alignment:
Q  317 tggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||  |||||||||||||||||||||||||||    
T  43388819 tggctaaaatgacactcattttgaaacggagggagta 43388855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 43427273 - 43427217
Alignment:
Q  291 attgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggag 347  Q
    |||||||| |||||| |||||| |||   ||||| ||||||||||||||||||||||    
T  43427273 attgcatttcttaatatgtgtgtaaagacctaaaacgacactcattttgaaacggag 43427217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 262 - 353
Target Start/End: Complemental strand, 24743 - 24652
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||||||||| |||||||||  | ||| ||||||||||| |||||  ||||||||||||||||||||||||| ||||||| ||||||    
T  24743 gtaaaattgctatgacatttgactattttattccattccttaatatgtgtacaaatggctaaagcgacactcattttaaaacggatggagta 24652  T

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Target: scaffold0003 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 247 - 342
Target Start/End: Original strand, 321862 - 321957
Alignment:
Q  247 agtaaggctatttcagtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaa 342  Q
    ||||||| ||||| ||||||||| ||||||||||||||||  | ||| |||||||||| | ||||| || | ||||||||||||||||||||||||    
T  321862 agtaaggttattttagtaaaattactatgatatttgactactttattccattccttaacccgtgtgcaattagctaaagcgacactcattttgaaa 321957  T

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Target: scaffold0015 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 262 - 353
Target Start/End: Complemental strand, 21084 - 20993
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||||||||||  ||||||||  | |||  |||||||||||| |||| || |||||||||||||||| ||||| ||||||||||||||    
T  21084 gtaaaattgctatgacgtttgactattttattttattccttaatctatgtgcaattggctaaagcgacactaattttaaaacggagggagta 20993  T

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Target: chr6 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 262 - 353
Target Start/End: Original strand, 1135075 - 1135166
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||| ||||| |||||||||  | ||| ||||||||||| |||||| || |||||||||| ||||| |||||||||||||| |||||    
T  1135075 gtaaaattgatatgacatttgactactttattccattccttaatatgtgtgcaattggctaaagcaacacttattttgaaacggagagagta 1135166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 262 - 353
Target Start/End: Complemental strand, 10520393 - 10520302
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||||||||| |||||||||  | ||| ||||||||||| |||||  || ||| ||||||||||||||||||  |||||||||||||    
T  10520393 gtaaaattgctatgacatttgactactttatttcattccttaatatgtgtacaattggttaaagcgacactcattttacaacggagggagta 10520302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 247 - 353
Target Start/End: Complemental strand, 17345152 - 17345050
Alignment:
Q  247 agtaaggctatttcagtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacgga 346  Q
    ||||||| ||||| |||||||||||||||| ||| |||||  | ||| |||||||||    ||||| || |||||||||||||||||||||| ||| |||    
T  17345152 agtaaggttattttagtaaaattgctatgacattcgactactttattccattcctta----gtgtgcaattggctaaagcgacactcattttaaaatgga 17345057  T
Q  347 gggagta 353  Q
    |||||||    
T  17345056 gggagta 17345050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 247 - 346
Target Start/End: Original strand, 25932765 - 25932864
Alignment:
Q  247 agtaaggctatttcagtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacgga 346  Q
    ||||||| ||||| |||||||||||||||| |||| ||||  | ||| |||| ||||||| ||||| || |||||||| ||||||| ||||| |||||||    
T  25932765 agtaaggttattttagtaaaattgctatgacatttaactactttatttcatttcttaatcggtgtgtaattggctaaaacgacacttattttaaaacgga 25932864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 297 - 353
Target Start/End: Complemental strand, 31275609 - 31275553
Alignment:
Q  297 ttccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||||||||||| || |||||||| | ||||| ||||||||||||||||||||    
T  31275609 ttccttaatctgtgtgcaattggctaaaacaacacttattttgaaacggagggagta 31275553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 247 - 338
Target Start/End: Original strand, 6992537 - 6992628
Alignment:
Q  247 agtaaggctatttcagtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcatttt 338  Q
    ||||||| ||||| ||||||||| ||||||| ||||||||  | ||| |||| ||||||||||||| || || |||||||  ||||||||||    
T  6992537 agtaaggttattttagtaaaattactatgatgtttgactattttatttcatttcttaatctgtgtgcaattgactaaagcaccactcatttt 6992628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 278 - 353
Target Start/End: Complemental strand, 29713393 - 29713318
Alignment:
Q  278 atttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||||  ||||| |||||||||||  ||||| || || ||||||||||||||||||| ||||||| ||||||    
T  29713393 atttgactacttgattccattccttaatacgtgtgcaattgactaaagcgacactcattttaaaacggaaggagta 29713318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 19674972 - 19674934
Alignment:
Q  317 tggctaaagcgacactcattttgaaacggagggagtagt 355  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  19674972 tggctaaatcgacactcattttgaaacggagggagtagt 19674934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 262 - 344
Target Start/End: Original strand, 19675128 - 19675210
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacg 344  Q
    ||||||||||||||| |||||||||  | |||  |||||||||| |||||  || ||| |||||||||||||||||| |||||    
T  19675128 gtaaaattgctatgacatttgactactttattcaattccttaatatgtgttcaattggttaaagcgacactcattttaaaacg 19675210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 317 - 353
Target Start/End: Original strand, 17246768 - 17246804
Alignment:
Q  317 tggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||| ||||||||||||||||||||||||||||    
T  17246768 tggctaaaacgacactcattttgaaacggagggagta 17246804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 247 - 335
Target Start/End: Original strand, 26189645 - 26189733
Alignment:
Q  247 agtaaggctatttcagtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcat 335  Q
    ||||||| ||||| |||| ||||||||||| |||| ||||  | ||| ||||||||||  |||||| || || ||||||||||||||||    
T  26189645 agtaaggttattttagtataattgctatgacatttaactactttatttcattccttaacatgtgtgcaattgtctaaagcgacactcat 26189733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 543 - 594
Target Start/End: Original strand, 20611516 - 20611567
Alignment:
Q  543 ttggggggtgcaaatagctcaatggagctgggccttcccaatgtatgggtct 594  Q
    |||||| ||||||| |||||||||||||||||||| || || ||||||||||    
T  20611516 ttggggtgtgcaaagagctcaatggagctgggcctccctaaggtatgggtct 20611567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 263 - 353
Target Start/End: Complemental strand, 24163716 - 24163625
Alignment:
Q  263 taaaattgctatgatatttgactaaatgattgcattccttaa-tctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||||||||| |||||||||  | ||| |||| ||||| | |||||| || |||||||| ||||||||| ||| ||||||| ||||||    
T  24163716 taaaattgctatgacatttgactattttatttcatttcttaattatgtgtgcaattggctaaaacgacactcactttaaaacggatggagta 24163625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 295 - 353
Target Start/End: Original strand, 234208 - 234266
Alignment:
Q  295 cattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||| |||||| ||||| || ||| |||| ||||||||||||||||||| ||||||||    
T  234208 cattctttaatccgtgtgcaattggttaaaacgacactcattttgaaacgaagggagta 234266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 321 - 355
Target Start/End: Complemental strand, 26189494 - 26189460
Alignment:
Q  321 taaagcgacactcattttgaaacggagggagtagt 355  Q
    |||||||||||||||||||||||||| ||||||||    
T  26189494 taaagcgacactcattttgaaacggatggagtagt 26189460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 319 - 353
Target Start/End: Complemental strand, 29399934 - 29399900
Alignment:
Q  319 gctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||| ||||||||||||||||||||||||||||    
T  29399934 gctaaaacgacactcattttgaaacggagggagta 29399900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 300 - 354
Target Start/End: Original strand, 32258900 - 32258954
Alignment:
Q  300 cttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagtag 354  Q
    |||||||||||||  || | ||||||||||||||||||| |||||| ||||||||    
T  32258900 cttaatctgtgtgtcaaagcctaaagcgacactcattttaaaacggtgggagtag 32258954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 291 - 353
Target Start/End: Original strand, 32429455 - 32429517
Alignment:
Q  291 attgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||| |||||| |||||| |||   ||||| | ||||||||||||||||||||||||||    
T  32429455 attgcatttcttaatatgtgtgtaaacacctaaaacaacactcattttgaaacggagggagta 32429517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 262 - 351
Target Start/End: Complemental strand, 23259328 - 23259239
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggag 351  Q
    ||||||||| || || |||||||||  | ||| |||| ||||||||||||| || | |||||||||| | ||||||  ||||||||||||    
T  23259328 gtaaaattgttacgacatttgactactttatttcatttcttaatctgtgtgcaattagctaaagcgaaattcatttcaaaacggagggag 23259239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 317 - 353
Target Start/End: Original strand, 1924826 - 1924862
Alignment:
Q  317 tggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||| ||||||||||||||||| |||||||||    
T  1924826 tggctaaagtgacactcattttgaaacagagggagta 1924862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 321 - 353
Target Start/End: Complemental strand, 9940634 - 9940602
Alignment:
Q  321 taaagcgacactcattttgaaacggagggagta 353  Q
    |||||||||||||||||||||||||| ||||||    
T  9940634 taaagcgacactcattttgaaacggatggagta 9940602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 317 - 353
Target Start/End: Complemental strand, 29927198 - 29927162
Alignment:
Q  317 tggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||| ||||||||||||||||||||| ||||||    
T  29927198 tggctaaaacgacactcattttgaaacggaaggagta 29927162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 295 - 353
Target Start/End: Complemental strand, 9630 - 9572
Alignment:
Q  295 cattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||||| |||||| || |||||||| ||||||||||||||||||||||||||||    
T  9630 cattccttaatatgtgtgtaattggctaaaacgacactcattttgaaacggagggagta 9572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 295 - 353
Target Start/End: Complemental strand, 12052 - 11994
Alignment:
Q  295 cattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||||||| |||| || | |||||||||||||||||||||||||||||||||||    
T  12052 cattccttaatctctgtgcaattcgctaaagcgacactcattttgaaacggagggagta 11994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 265 - 354
Target Start/End: Complemental strand, 1448 - 1359
Alignment:
Q  265 aaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagtag 354  Q
    |||||||||||| |||||||||  | ||| |||||||||||||||||| || || |||||| |||||||||||| ||| |||| ||||||    
T  1448 aaattgctatgacatttgactactttatttcattccttaatctgtgtgcaattgactaaagtgacactcattttaaaaaggagagagtag 1359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 262 - 339
Target Start/End: Original strand, 62783 - 62860
Alignment:
Q  262 gtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttg 339  Q
    ||||||||| ||||| |||||||||  | ||| ||||||||||| |||||| || |||||||||||||||||||||||    
T  62783 gtaaaattgttatgacatttgactactttattccattccttaatatgtgtgcaattggctaaagcgacactcattttg 62860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0758 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0758
Description:

Target: scaffold0758; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 266 - 353
Target Start/End: Complemental strand, 6326 - 6239
Alignment:
Q  266 aattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||| ||||| |||||||||  | ||| |||||||||||| ||||| || | ||||||| |||||||||||||||||||| ||||||    
T  6326 aattgttatgacatttgactactttatttcattccttaatccgtgtgcaattagctaaagtgacactcattttgaaacggaaggagta 6239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0580 (Bit Score: 35; Significance: 0.0000000002; HSPs: 4)
Name: scaffold0580
Description:

Target: scaffold0580; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 353
Target Start/End: Original strand, 1756 - 1814
Alignment:
Q  295 cattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||| |||||||| ||||  || | ||||||||||||||||||||||||||||||||||    
T  1756 catttcttaatctatgtgccaacgtctaaagcgacactcattttgaaacggagggagta 1814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0580; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 353
Target Start/End: Original strand, 9495 - 9553
Alignment:
Q  295 cattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||| |||||||| ||||  || | ||||||||||||||||||||||||||||||||||    
T  9495 catttcttaatctatgtgccaacgtctaaagcgacactcattttgaaacggagggagta 9553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0580; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 317 - 353
Target Start/End: Complemental strand, 1631 - 1595
Alignment:
Q  317 tggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||| |||||||||||||||||||||||||||    
T  1631 tggctaaagtgacactcattttgaaacggagggagta 1595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0580; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 317 - 353
Target Start/End: Complemental strand, 9370 - 9334
Alignment:
Q  317 tggctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||| |||||||||||||||||||||||||||    
T  9370 tggctaaagtgacactcattttgaaacggagggagta 9334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 247 - 353
Target Start/End: Complemental strand, 70471 - 70365
Alignment:
Q  247 agtaaggctatttcagtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacgga 346  Q
    ||||||| ||||| ||||||||||  |||| |||||||||  | |||  ||| |||||||||| || || ||| || ||||||||||||||| |||||||    
T  70471 agtaaggttattttagtaaaattgtcatgacatttgactactttattcaatttcttaatctgtatgcaattggttatagcgacactcattttaaaacgga 70372  T
Q  347 gggagta 353  Q
     ||||||    
T  70371 aggagta 70365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 317 - 353
Target Start/End: Original strand, 70617 - 70653
Alignment:
Q  317 tggctaaagcgacactcattttgaaacggagggagta 353  Q
    |||||||| ||||||||||||||||||||||||||||    
T  70617 tggctaaaacgacactcattttgaaacggagggagta 70653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0332 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 319 - 353
Target Start/End: Original strand, 3975 - 4009
Alignment:
Q  319 gctaaagcgacactcattttgaaacggagggagta 353  Q
    ||||||||| |||||||||||||||||||||||||    
T  3975 gctaaagcggcactcattttgaaacggagggagta 4009  T

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