View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16832_high_10 (Length: 444)

Name: NF16832_high_10
Description: NF16832
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16832_high_10
NF16832_high_10
[»] chr2 (52 HSPs)
chr2 (23-429)||(30798484-30798893)
chr2 (219-430)||(33366485-33366706)
chr2 (219-430)||(32497790-32498011)
chr2 (219-430)||(35114660-35114881)
chr2 (254-430)||(16104194-16104370)
chr2 (219-430)||(18685711-18685932)
chr2 (219-430)||(34338685-34338906)
chr2 (219-430)||(44284512-44284725)
chr2 (254-430)||(42706278-42706455)
chr2 (254-430)||(5278828-5279004)
chr2 (254-430)||(9732924-9733100)
chr2 (219-430)||(33889133-33889339)
chr2 (254-430)||(2645080-2645256)
chr2 (254-430)||(19513683-19513859)
chr2 (219-430)||(17540589-17540811)
chr2 (219-430)||(2085947-2086168)
chr2 (256-430)||(26418845-26419019)
chr2 (254-430)||(7258816-7258993)
chr2 (219-430)||(4641391-4641612)
chr2 (219-430)||(37308531-37308751)
chr2 (300-430)||(7761567-7761697)
chr2 (219-430)||(37003862-37004084)
chr2 (219-430)||(30326326-30326546)
chr2 (219-430)||(9717116-9717320)
chr2 (254-394)||(39461234-39461374)
chr2 (254-430)||(42365497-42365673)
chr2 (256-430)||(28824551-28824724)
chr2 (254-430)||(40692225-40692393)
chr2 (303-430)||(12672468-12672595)
chr2 (264-430)||(3913454-3913619)
chr2 (219-430)||(12939294-12939506)
chr2 (222-430)||(32766498-32766706)
chr2 (264-430)||(11114803-11114968)
chr2 (256-430)||(13829361-13829534)
chr2 (253-379)||(18793306-18793432)
chr2 (283-430)||(8112247-8112396)
chr2 (264-427)||(16177880-16178040)
chr2 (254-430)||(40832463-40832640)
chr2 (264-429)||(6896099-6896263)
chr2 (304-430)||(10399864-10399990)
chr2 (219-420)||(27462806-27463014)
chr2 (254-419)||(38993076-38993237)
chr2 (352-430)||(26981703-26981781)
chr2 (358-430)||(1247171-1247243)
chr2 (264-409)||(20907520-20907664)
chr2 (305-394)||(30712828-30712916)
chr2 (258-336)||(26981777-26981856)
chr2 (351-430)||(41366104-41366183)
chr2 (271-422)||(45463112-45463261)
chr2 (363-430)||(38623298-38623365)
chr2 (258-388)||(35473036-35473165)
chr2 (313-430)||(41934560-41934677)
[»] chr4 (77 HSPs)
chr4 (219-430)||(33552829-33553035)
chr4 (219-430)||(20802518-20802739)
chr4 (219-430)||(2725120-2725325)
chr4 (219-430)||(23521758-23521979)
chr4 (219-430)||(43640977-43641198)
chr4 (219-430)||(24002216-24002438)
chr4 (219-430)||(49152087-49152307)
chr4 (219-430)||(21579904-21580125)
chr4 (219-430)||(56154499-56154720)
chr4 (254-430)||(29785524-29785700)
chr4 (249-430)||(54542908-54543088)
chr4 (254-430)||(33177019-33177195)
chr4 (254-430)||(55593808-55593984)
chr4 (261-430)||(55065320-55065488)
chr4 (254-430)||(20518009-20518185)
chr4 (219-430)||(36885824-36886031)
chr4 (254-430)||(37865676-37865852)
chr4 (219-430)||(12600764-12600985)
chr4 (219-428)||(52319204-52319420)
chr4 (221-430)||(36497112-36497316)
chr4 (254-430)||(6776501-6776677)
chr4 (254-430)||(9512327-9512503)
chr4 (219-430)||(20694254-20694470)
chr4 (263-430)||(24210250-24210418)
chr4 (254-430)||(36743675-36743851)
chr4 (273-430)||(38812462-38812619)
chr4 (219-394)||(29616063-29616233)
chr4 (256-430)||(21202665-21202838)
chr4 (268-430)||(38486244-38486406)
chr4 (273-430)||(50727900-50728057)
chr4 (273-430)||(50735914-50736071)
chr4 (264-430)||(32181197-32181362)
chr4 (219-428)||(47361402-47361602)
chr4 (256-430)||(1231236-1231410)
chr4 (261-430)||(34929845-34930014)
chr4 (256-430)||(44649151-44649322)
chr4 (275-429)||(4325735-4325889)
chr4 (269-430)||(46680497-46680658)
chr4 (276-429)||(47642479-47642631)
chr4 (264-429)||(50186462-50186626)
chr4 (258-430)||(44324329-44324500)
chr4 (276-430)||(50178479-50178633)
chr4 (254-388)||(14296520-14296654)
chr4 (254-388)||(14314768-14314902)
chr4 (256-430)||(52949647-52949819)
chr4 (219-430)||(23327810-23328018)
chr4 (254-430)||(9807080-9807254)
chr4 (264-429)||(7554945-7555109)
chr4 (289-430)||(42869931-42870070)
chr4 (276-430)||(37695528-37695681)
chr4 (269-430)||(37931859-37932019)
chr4 (305-430)||(41711821-41711946)
chr4 (256-419)||(22318382-22318544)
chr4 (259-430)||(29592824-29592994)
chr4 (256-430)||(3649562-3649735)
chr4 (351-430)||(2629938-2630017)
chr4 (264-430)||(53200630-53200796)
chr4 (276-429)||(16320467-16320617)
chr4 (265-419)||(39078596-39078749)
chr4 (219-334)||(53343560-53343670)
chr4 (304-430)||(2786937-2787063)
chr4 (304-430)||(11056015-11056141)
chr4 (344-421)||(28115265-28115342)
chr4 (264-419)||(7001788-7001940)
chr4 (304-391)||(42772731-42772818)
chr4 (344-430)||(50729529-50729615)
chr4 (311-430)||(43739441-43739560)
chr4 (364-430)||(25978598-25978664)
chr4 (351-415)||(45577694-45577758)
chr4 (264-430)||(26083272-26083438)
chr4 (375-430)||(42772832-42772887)
chr4 (351-408)||(3579144-3579201)
chr4 (315-428)||(13110311-13110425)
chr4 (304-409)||(30942761-30942866)
chr4 (351-416)||(38520519-38520584)
chr4 (304-377)||(56487292-56487365)
chr4 (312-428)||(52755501-52755617)
[»] chr1 (59 HSPs)
chr1 (219-430)||(16386738-16386959)
chr1 (219-430)||(844793-845014)
chr1 (219-430)||(30105749-30105955)
chr1 (219-430)||(26118284-26118490)
chr1 (254-430)||(45490944-45491120)
chr1 (253-430)||(6711115-6711292)
chr1 (254-430)||(42510454-42510630)
chr1 (219-430)||(51264379-51264600)
chr1 (220-430)||(35387380-35387600)
chr1 (254-430)||(12890167-12890343)
chr1 (219-430)||(7183802-7184023)
chr1 (254-430)||(1351504-1351679)
chr1 (219-430)||(16451011-16451232)
chr1 (219-430)||(28340372-28340593)
chr1 (219-430)||(41972796-41973016)
chr1 (219-428)||(44738113-44738331)
chr1 (219-430)||(32270242-32270458)
chr1 (254-430)||(17887876-17888053)
chr1 (254-430)||(24339707-24339882)
chr1 (254-427)||(50540273-50540446)
chr1 (254-430)||(32289413-32289589)
chr1 (219-430)||(16437262-16437467)
chr1 (264-430)||(41967918-41968084)
chr1 (229-382)||(20495008-20495156)
chr1 (276-420)||(38663084-38663227)
chr1 (264-419)||(1601112-1601267)
chr1 (278-429)||(16476225-16476375)
chr1 (219-430)||(51703233-51703452)
chr1 (254-430)||(3414922-3415099)
chr1 (254-430)||(17327718-17327894)
chr1 (219-430)||(39281779-39281999)
chr1 (258-430)||(25539789-25539960)
chr1 (264-430)||(13994144-13994309)
chr1 (276-430)||(31004084-31004237)
chr1 (256-430)||(38087065-38087238)
chr1 (256-430)||(42512839-42513012)
chr1 (254-430)||(46154829-46155012)
chr1 (256-430)||(50304583-50304756)
chr1 (304-429)||(49303424-49303548)
chr1 (289-429)||(42705308-42705448)
chr1 (258-430)||(45658755-45658926)
chr1 (256-430)||(6029370-6029543)
chr1 (269-429)||(25343279-25343438)
chr1 (219-411)||(34663826-34664013)
chr1 (264-430)||(11772701-11772866)
chr1 (305-430)||(50382472-50382597)
chr1 (314-430)||(5109718-5109833)
chr1 (254-430)||(26764864-26765034)
chr1 (312-430)||(16704713-16704831)
chr1 (256-408)||(15539981-15540132)
chr1 (257-430)||(10384300-10384472)
chr1 (351-410)||(46815818-46815877)
chr1 (264-419)||(6144066-6144220)
chr1 (375-430)||(23799606-23799661)
chr1 (314-419)||(570375-570482)
chr1 (264-328)||(21071664-21071727)
chr1 (351-430)||(26733581-26733660)
chr1 (353-430)||(504460-504537)
chr1 (351-415)||(21763187-21763251)
[»] chr8 (54 HSPs)
chr8 (219-430)||(14005053-14005259)
chr8 (254-430)||(29672332-29672508)
chr8 (219-429)||(45446330-45446550)
chr8 (219-430)||(4052372-4052576)
chr8 (219-430)||(29563235-29563456)
chr8 (219-430)||(32303594-32303815)
chr8 (219-430)||(37664292-37664498)
chr8 (219-430)||(3251665-3251886)
chr8 (254-430)||(5968873-5969049)
chr8 (219-430)||(30543031-30543237)
chr8 (219-430)||(6386451-6386672)
chr8 (219-430)||(8673064-8673285)
chr8 (219-430)||(31513592-31513813)
chr8 (219-430)||(32020010-32020231)
chr8 (219-430)||(41709652-41709873)
chr8 (254-430)||(34101428-34101604)
chr8 (215-430)||(12753334-12753558)
chr8 (219-430)||(34063003-34063224)
chr8 (219-430)||(31731939-31732160)
chr8 (254-430)||(7394823-7394999)
chr8 (254-430)||(27103879-27104055)
chr8 (254-430)||(13406944-13407120)
chr8 (221-430)||(7591456-7591664)
chr8 (221-430)||(10466952-10467160)
chr8 (219-430)||(41548504-41548714)
chr8 (264-430)||(17805620-17805787)
chr8 (254-429)||(25478168-25478338)
chr8 (271-429)||(39642821-39642978)
chr8 (258-430)||(37618401-37618572)
chr8 (256-430)||(15001389-15001562)
chr8 (254-430)||(45113976-45114151)
chr8 (256-430)||(22999180-22999354)
chr8 (264-430)||(30501076-30501241)
chr8 (258-430)||(40388965-40389136)
chr8 (264-430)||(29611064-29611229)
chr8 (330-430)||(21272680-21272780)
chr8 (264-419)||(35225593-35225747)
chr8 (343-430)||(37861868-37861955)
chr8 (314-421)||(27109559-27109666)
chr8 (219-318)||(37861771-37861865)
chr8 (316-409)||(6460243-6460337)
chr8 (305-410)||(10320306-10320411)
chr8 (256-376)||(37474642-37474761)
chr8 (264-418)||(10656707-10656860)
chr8 (218-297)||(21272587-21272676)
chr8 (314-430)||(17520583-17520690)
chr8 (351-417)||(10932753-10932819)
chr8 (305-419)||(16485829-16485943)
chr8 (305-394)||(16595194-16595283)
chr8 (300-361)||(32918851-32918912)
chr8 (313-413)||(11926856-11926956)
chr8 (313-393)||(11944854-11944934)
chr8 (351-418)||(3800964-3801031)
chr8 (219-257)||(35225538-35225576)
[»] chr5 (42 HSPs)
chr5 (219-430)||(7523046-7523268)
chr5 (219-430)||(2351555-2351776)
chr5 (219-430)||(4818140-4818361)
chr5 (219-430)||(35701152-35701373)
chr5 (223-430)||(29241272-29241474)
chr5 (219-430)||(21739161-21739377)
chr5 (254-430)||(31770591-31770767)
chr5 (254-430)||(32528635-32528811)
chr5 (219-430)||(24181624-24181830)
chr5 (219-430)||(11963216-11963437)
chr5 (219-428)||(7208232-7208436)
chr5 (220-429)||(41459480-41459684)
chr5 (219-430)||(31880076-31880282)
chr5 (222-430)||(34794765-34794983)
chr5 (256-426)||(40182386-40182556)
chr5 (256-430)||(24036155-24036326)
chr5 (254-430)||(6284298-6284475)
chr5 (257-430)||(40489260-40489433)
chr5 (253-430)||(41790462-41790639)
chr5 (254-430)||(39918427-39918603)
chr5 (254-430)||(28090520-28090696)
chr5 (219-430)||(23091304-23091510)
chr5 (256-430)||(39788114-39788289)
chr5 (266-430)||(5571644-5571806)
chr5 (254-430)||(8136759-8136933)
chr5 (264-430)||(22493419-22493584)
chr5 (276-430)||(31644389-31644542)
chr5 (276-430)||(3735300-3735453)
chr5 (221-430)||(7770279-7770497)
chr5 (276-430)||(8560982-8561134)
chr5 (258-431)||(5673068-5673236)
chr5 (279-430)||(553341-553493)
chr5 (263-430)||(700601-700768)
chr5 (264-430)||(4689698-4689863)
chr5 (256-430)||(18470428-18470601)
chr5 (305-430)||(7725809-7725934)
chr5 (314-430)||(22432309-22432425)
chr5 (314-430)||(32092982-32093097)
chr5 (323-419)||(27839084-27839180)
chr5 (219-254)||(20119646-20119681)
chr5 (256-371)||(37148633-37148747)
chr5 (373-418)||(26180306-26180351)
[»] chr3 (53 HSPs)
chr3 (219-430)||(20609636-20609842)
chr3 (254-430)||(28675711-28675887)
chr3 (219-430)||(34026558-34026764)
chr3 (219-430)||(44116830-44117036)
chr3 (254-430)||(21221348-21221524)
chr3 (219-430)||(42636391-42636597)
chr3 (219-430)||(2134946-2135167)
chr3 (254-427)||(1344698-1344871)
chr3 (254-430)||(12349159-12349335)
chr3 (219-430)||(47958420-47958641)
chr3 (254-419)||(4851455-4851620)
chr3 (219-430)||(26282375-26282596)
chr3 (219-430)||(29584751-29584972)
chr3 (254-430)||(40094424-40094600)
chr3 (254-430)||(51259768-51259944)
chr3 (258-430)||(53557783-53557955)
chr3 (254-430)||(39052826-39053003)
chr3 (254-430)||(25860409-25860585)
chr3 (256-430)||(31883010-31883183)
chr3 (254-430)||(3864663-3864838)
chr3 (254-430)||(25927315-25927491)
chr3 (219-418)||(5442167-5442376)
chr3 (264-430)||(33364766-33364931)
chr3 (274-430)||(20254986-20255141)
chr3 (254-430)||(24571202-24571378)
chr3 (254-394)||(53046670-53046805)
chr3 (275-430)||(38213296-38213451)
chr3 (219-409)||(3695301-3695481)
chr3 (256-430)||(50386444-50386617)
chr3 (304-430)||(54622784-54622910)
chr3 (258-430)||(51925196-51925367)
chr3 (264-430)||(3964220-3964385)
chr3 (314-430)||(29646047-29646163)
chr3 (219-430)||(21373816-21374027)
chr3 (301-430)||(49748899-49749028)
chr3 (305-430)||(51296553-51296678)
chr3 (269-394)||(41694925-41695049)
chr3 (268-419)||(3867648-3867798)
chr3 (219-350)||(43175445-43175586)
chr3 (276-379)||(10747161-10747264)
chr3 (314-430)||(50678779-50678895)
chr3 (344-430)||(19906773-19906859)
chr3 (276-419)||(22484742-22484884)
chr3 (344-430)||(24721496-24721582)
chr3 (305-388)||(32621841-32621924)
chr3 (311-415)||(44267720-44267824)
chr3 (315-394)||(45690925-45691004)
chr3 (351-430)||(8648545-8648624)
chr3 (351-402)||(39215485-39215536)
chr3 (305-371)||(8253646-8253712)
chr3 (300-430)||(25954418-25954547)
chr3 (300-392)||(25395581-25395673)
chr3 (351-415)||(34351371-34351435)
[»] chr6 (42 HSPs)
chr6 (220-430)||(24242540-24242760)
chr6 (221-429)||(17867712-17867930)
chr6 (221-429)||(17877495-17877713)
chr6 (219-430)||(24203238-24203458)
chr6 (254-430)||(2614816-2614992)
chr6 (219-430)||(3259553-3259779)
chr6 (219-430)||(11613824-11614030)
chr6 (254-430)||(3932840-3933016)
chr6 (221-430)||(34176722-34176926)
chr6 (254-430)||(32409885-32410061)
chr6 (256-430)||(166956-167130)
chr6 (219-430)||(15276970-15277191)
chr6 (254-430)||(32132413-32132589)
chr6 (254-430)||(15277313-15277489)
chr6 (219-430)||(11212132-11212353)
chr6 (254-430)||(10324144-10324320)
chr6 (219-430)||(17443138-17443358)
chr6 (220-430)||(18057396-18057615)
chr6 (278-430)||(10485102-10485253)
chr6 (306-430)||(11279100-11279224)
chr6 (268-430)||(10959935-10960096)
chr6 (254-430)||(14925489-14925664)
chr6 (311-430)||(11382041-11382158)
chr6 (300-430)||(3290638-3290766)
chr6 (276-430)||(31870133-31870286)
chr6 (300-419)||(34684027-34684147)
chr6 (219-348)||(29814740-29814879)
chr6 (314-430)||(11675407-11675523)
chr6 (219-348)||(28502334-28502474)
chr6 (314-430)||(3379690-3379806)
chr6 (249-429)||(4494149-4494312)
chr6 (314-421)||(8177923-8178030)
chr6 (315-430)||(9902691-9902806)
chr6 (283-421)||(14808043-14808179)
chr6 (305-419)||(18597202-18597316)
chr6 (304-429)||(23636193-23636318)
chr6 (264-419)||(29054289-29054441)
chr6 (264-394)||(35004197-35004326)
chr6 (219-297)||(32805353-32805441)
chr6 (305-393)||(16542345-16542433)
chr6 (305-401)||(27824712-27824808)
chr6 (219-251)||(34684207-34684239)
[»] chr7 (60 HSPs)
chr7 (219-430)||(40753049-40753255)
chr7 (221-428)||(18386406-18386623)
chr7 (219-430)||(46633576-46633797)
chr7 (219-430)||(3922698-3922919)
chr7 (254-430)||(47953114-47953290)
chr7 (219-430)||(11321880-11322101)
chr7 (219-430)||(26994220-26994441)
chr7 (219-430)||(32873764-32873985)
chr7 (219-430)||(36769564-36769785)
chr7 (219-430)||(10932552-10932773)
chr7 (218-430)||(41211195-41211418)
chr7 (254-430)||(43158681-43158857)
chr7 (219-430)||(18470563-18470784)
chr7 (256-430)||(29661249-29661423)
chr7 (254-430)||(21784795-21784971)
chr7 (254-430)||(30849241-30849417)
chr7 (254-430)||(26371804-26371980)
chr7 (254-430)||(1870058-1870235)
chr7 (254-394)||(47947684-47947824)
chr7 (219-430)||(47316693-47316899)
chr7 (254-430)||(3892021-3892197)
chr7 (276-430)||(44748641-44748795)
chr7 (254-430)||(43189237-43189414)
chr7 (254-430)||(30599003-30599179)
chr7 (266-430)||(11250558-11250717)
chr7 (269-429)||(34117392-34117551)
chr7 (258-429)||(26652795-26652965)
chr7 (276-430)||(34295399-34295552)
chr7 (256-430)||(43368128-43368301)
chr7 (219-428)||(46408775-46408987)
chr7 (264-430)||(21133305-21133472)
chr7 (258-421)||(43213929-43214091)
chr7 (256-430)||(329397-329570)
chr7 (219-333)||(47442731-47442840)
chr7 (254-430)||(23349286-23349461)
chr7 (276-430)||(1363584-1363736)
chr7 (300-430)||(38301313-38301442)
chr7 (314-430)||(20127273-20127389)
chr7 (219-372)||(16962991-16963150)
chr7 (276-409)||(9913472-9913604)
chr7 (276-409)||(9927160-9927292)
chr7 (305-419)||(41665581-41665695)
chr7 (257-430)||(48894645-48894817)
chr7 (264-415)||(15035263-15035413)
chr7 (254-329)||(12982227-12982302)
chr7 (264-419)||(22724537-22724691)
chr7 (253-430)||(11822155-11822323)
chr7 (311-430)||(37966955-37967074)
chr7 (304-430)||(17237050-17237176)
chr7 (264-430)||(48445456-48445621)
chr7 (264-405)||(22724052-22724192)
chr7 (314-426)||(22631722-22631834)
chr7 (258-429)||(46448640-46448810)
chr7 (304-419)||(46627144-46627259)
chr7 (351-419)||(34519529-34519597)
chr7 (351-430)||(48699419-48699498)
chr7 (366-430)||(16963174-16963238)
chr7 (351-419)||(26910416-26910484)
chr7 (358-410)||(35645475-35645527)
chr7 (329-413)||(42332058-42332142)
[»] scaffold0004 (1 HSPs)
scaffold0004 (219-430)||(372964-373170)
[»] scaffold0169 (2 HSPs)
scaffold0169 (219-430)||(12536-12757)
scaffold0169 (219-430)||(18054-18275)
[»] scaffold0098 (1 HSPs)
scaffold0098 (219-430)||(51314-51534)
[»] scaffold0014 (1 HSPs)
scaffold0014 (219-430)||(101824-102045)
[»] scaffold0360 (2 HSPs)
scaffold0360 (219-430)||(15381-15583)
scaffold0360 (305-394)||(13615-13704)
[»] scaffold0208 (1 HSPs)
scaffold0208 (219-430)||(2338-2559)
[»] scaffold0729 (1 HSPs)
scaffold0729 (254-430)||(4579-4755)
[»] scaffold0054 (1 HSPs)
scaffold0054 (219-430)||(23452-23671)
[»] scaffold0181 (1 HSPs)
scaffold0181 (258-428)||(19092-19262)
[»] scaffold0957 (1 HSPs)
scaffold0957 (254-430)||(2496-2671)
[»] scaffold0650 (1 HSPs)
scaffold0650 (258-430)||(1643-1814)
[»] scaffold0027 (1 HSPs)
scaffold0027 (253-430)||(15091-15268)
[»] scaffold0025 (1 HSPs)
scaffold0025 (264-429)||(5441-5605)
[»] scaffold0280 (1 HSPs)
scaffold0280 (283-430)||(13687-13833)
[»] scaffold0155 (1 HSPs)
scaffold0155 (300-415)||(33559-33674)
[»] scaffold0050 (1 HSPs)
scaffold0050 (305-430)||(42950-43074)
[»] scaffold0003 (1 HSPs)
scaffold0003 (219-251)||(338762-338794)


Alignment Details
Target: chr2 (Bit Score: 261; Significance: 1e-145; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 23 - 429
Target Start/End: Complemental strand, 30798893 - 30798484
Alignment:
Q  23 ttaaacttgtgcgaagatccttgttagactaacatgagatattccggattgaaataaaatgattgaagattataatttggtgaaatagacacagaagata 122  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  30798893 ttaaacttgtgcgaagatccttattagactaacatgagatattccggattgaaataaaatgattgaagattataattaggtgaaatagacacagaagata 30798794  T
Q  123 tagacatatccattgttattgtaaactatttatgttgttgaaaaaatacaaaaatatttttgatattattctttc-aaatggagactttcattttacgtg 221  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||      |||||| |||    
T  30798793 tagacatatccattgttattgtaaactatttatattgttgaaaaaatacaaaaatatttttgatattattcttccaaaatggag------attttatgtg 30798700  T
Q  222 tttggtttgcaaaacagcaagtattggacaga----------atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagt 311  Q
    ||||||||||||||||||||||| ||||||||          ||||||||||  |||| ||||||||||| |||| ||||||||||| |||  ||| |||    
T  30798699 tttggtttgcaaaacagcaagtactggacagaacagtataagatagaacagt--aacataagacagaacagcacatgacaaattttgtatggtatttagt 30798602  T
Q  312 aattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgagga 411  Q
    ||||||||||||||||| |||||||||||| ||||||| |||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||     
T  30798601 aattttttgttttatacgatttttgagggacaaaatgctattttggtattttagataacttgtacgtgggataaaaagttgtgatgtggtttggtgaggg 30798502  T
Q  412 acaaaaatatgagttttt 429  Q
    ||||||||||||||||||    
T  30798501 acaaaaatatgagttttt 30798484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 219 - 430
Target Start/End: Original strand, 33366485 - 33366706
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattg 308  Q
    |||||||||||||||||||||||||| |||||||||          ||||||||||||||||||| ||||||| |||||||||||||||  ||| |||||    
T  33366485 gtgtttggtttgcaaaacagcaagtactggacagaacaatacaagatagaacagtacaacacaagtcagaacagcacaggacaaattttttatggcattg 33366584  T
Q  309 agtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtga 408  Q
    | |||||||||||||||||| |||||||||||| ||||||  ||||||||||||||||||||| ||| |||||| ||||||||||| | |||||||||||    
T  33366585 aataattttttgttttatacgatttttgagggacaaaatgttattttggtattttagacaacttgtatgtgggagaaaaagttgtgttgtggtttggtga 33366684  T
Q  409 ggaacaaaaatatgagtttttg 430  Q
    ||||||||||||||||||||||    
T  33366685 ggaacaaaaatatgagtttttg 33366706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 219 - 430
Target Start/End: Original strand, 32497790 - 32498011
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattg 308  Q
    |||||||||||||||||||| ||||| |||||||||          ||||||||||||||| ||| ||||||| |||||||||||||||  ||| |||||    
T  32497790 gtgtttggtttgcaaaacagtaagtactggacagaacaatacaagatagaacagtacaacaaaaggcagaacagcacaggacaaattttttatggcattg 32497889  T
Q  309 agtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtga 408  Q
    |||||||||||||||||||| |||||||| ||| ||||||  ||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||    
T  32497890 agtaattttttgttttatacgatttttgaaggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgatgtggtttggtga 32497989  T
Q  409 ggaacaaaaatatgagtttttg 430  Q
    || |||||||||||||||||||    
T  32497990 ggtacaaaaatatgagtttttg 32498011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 219 - 430
Target Start/End: Original strand, 35114660 - 35114881
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattg 308  Q
    |||||||||||||||||||||||||| |||||||||          ||||||||||||||||||| ||||||  |||||||||||||||  ||| || ||    
T  35114660 gtgtttggtttgcaaaacagcaagtactggacagaacagtacaagatagaacagtacaacacaaggcagaacggcacaggacaaattttttatggcaatg 35114759  T
Q  309 agtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtga 408  Q
    |||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||| |||||||||| ||||| ||||| | |||||||||||    
T  35114760 agtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaaattgtgttgtggtttggtga 35114859  T
Q  409 ggaacaaaaatatgagtttttg 430  Q
    || |||||||||||||||||||    
T  35114860 gggacaaaaatatgagtttttg 35114881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 254 - 430
Target Start/End: Original strand, 16104194 - 16104370
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatt 353  Q
    |||||||||||||||||||| |||||||||||||| ||||||||  ||| ||||||||||||||||||||||||| |||||||||||| ||||||| |||    
T  16104194 atagaacagtacaacacaaggcagaacaacacagggcaaattttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgctatt 16104293  T
Q  354 ttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||||||||||||| | ||||||| || ||||||||||| | ||||||||||||| |||||||||||||||||||    
T  16104294 ttggtattttagacaatttgtacgtgagacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttg 16104370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 219 - 430
Target Start/End: Original strand, 18685711 - 18685932
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattg 308  Q
    |||||||||||||||||||||||||| |||||||||          ||||||||||||||||||||||||||| |||||||||||||||  ||| |||||    
T  18685711 gtgtttggtttgcaaaacagcaagtactggacagaacagtacaagatagaacagtacaacacaagacagaacagcacaggacaaattttttatggcattg 18685810  T
Q  309 agtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtga 408  Q
    |||||||||||||||||||  |||||||||||| ||||||  |||||  |||||||||||||| |||||||||| ||||||||||| | |||||||||||    
T  18685811 agtaattttttgttttataggatttttgagggacaaaatgttattttaatattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtga 18685910  T
Q  409 ggaacaaaaatatgagtttttg 430  Q
    |  |||||||||||||||||||    
T  18685911 gagacaaaaatatgagtttttg 18685932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 219 - 430
Target Start/End: Original strand, 34338685 - 34338906
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattg 308  Q
    ||||||||||||||||||| |||||| |||||||||          ||||||||||||||||||| ||||||| ||||||||||| |||  ||| |||||    
T  34338685 gtgtttggtttgcaaaacaacaagtactggacagaacagtacaagatagaacagtacaacacaaggcagaacagcacaggacaaaatttttatggcattg 34338784  T
Q  309 agtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtga 408  Q
    |||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||| || ||||||| ||||||||||| | |||||||||||    
T  34338785 agtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtgcgtgggacaaaaagttgtgctgtggtttggtga 34338884  T
Q  409 ggaacaaaaatatgagtttttg 430  Q
    ||  ||||||||||||||||||    
T  34338885 gggtcaaaaatatgagtttttg 34338906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 219 - 430
Target Start/End: Original strand, 44284512 - 44284725
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaatagaacag--tacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattt 316  Q
    |||||||||||||||||||||||||| ||||||||| || |||   || |||||||| ||||||| |||| ||||||||||  ||| |||||||||||||    
T  44284512 gtgtttggtttgcaaaacagcaagtactggacagaacagtacaagatagaacacaaggcagaacagcacatgacaaattttttatggcattgagtaattt 44284611  T
Q  317 tttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaa 416  Q
    |||||||||||| |||||||||||| ||||||| |||||| |||||||||||||| ||||||| || ||||||||||| | |||||| |||||| |||||    
T  44284612 tttgttttatacgatttttgagggacaaaatgctattttgttattttagacaacttgtacgtgagacaaaaagttgtgctgtggtttagtgagggacaaa 44284711  T
Q  417 aatatgagtttttg 430  Q
    ||||||||||||||    
T  44284712 aatatgagtttttg 44284725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 254 - 430
Target Start/End: Original strand, 42706278 - 42706455
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaatttt-ttgttttatacaatttttgagggagaaaatgcaat 352  Q
    |||||||| ||||||||||||||||||| |||||||||||||||  ||| |||||||||||||| ||||||||||| |||||||||||| ||||||| ||    
T  42706278 atagaacaatacaacacaagacagaacagcacaggacaaattttttatggcattgagtaatttttttgttttatacgatttttgagggacaaaatgctat 42706377  T
Q  353 tttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    ||||||||||||||||||| ||| |||||| ||||||||||| | ||||||||||||| |||||||||||||||||||    
T  42706378 tttggtattttagacaacttgtatgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttg 42706455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 254 - 430
Target Start/End: Complemental strand, 5279004 - 5278828
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatt 353  Q
    |||||||| ||||||||||| ||||||| |||||||||||||||  ||| ||||||||||||||||||||||||| |||||||| ||| ||||||| |||    
T  5279004 atagaacaatacaacacaaggcagaacagcacaggacaaattttttatggcattgagtaattttttgttttatacgatttttgaaggacaaaatgctatt 5278905  T
Q  354 ttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||||||||||||||| |||||||||| ||||| ||||| | ||||||||||||| |||||||||||||||||||    
T  5278904 ttggtattttagacaacttgtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttg 5278828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 254 - 430
Target Start/End: Complemental strand, 9733100 - 9732924
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatt 353  Q
    |||||||||||||||||||| ||||||  |||||||||||||||  ||| |||||| |||||||||||||||||| |||||||||||| ||||||| |||    
T  9733100 atagaacagtacaacacaaggcagaacggcacaggacaaattttttatggcattgaataattttttgttttatacgatttttgagggacaaaatgctatt 9733001  T
Q  354 ttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    ||| |||||||||||||| |||||||||| ||||||||||| | ||||||||||||| |||||||||||||||||||    
T  9733000 ttgatattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttg 9732924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 219 - 430
Target Start/End: Original strand, 33889133 - 33889339
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaatagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttt 318  Q
    |||||||||||||||||||| ||||| |||||||||     |||||||||||||| ||||||| ||||  |||||||||  |||  ||||||||||||||    
T  33889133 gtgtttggtttgcaaaacagtaagtactggacagaa-----cagtacaacacaaggcagaacagcacataacaaattttttatggtattgagtaattttt 33889227  T
Q  319 tgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaa 418  Q
    |||||||||  |||||||||||| ||||||  ||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||| | |||||    
T  33889228 tgttttatatgatttttgagggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggaaaaaaa 33889327  T
Q  419 tatgagtttttg 430  Q
    ||||||||||||    
T  33889328 tatgagtttttg 33889339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 254 - 430
Target Start/End: Complemental strand, 2645256 - 2645080
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatt 353  Q
    |||||||||||||||| ||| ||||||| ||| |||||||||||  ||| ||||||||||||||||||||||||| |||||||||| | ||||||| |||    
T  2645256 atagaacagtacaacataaggcagaacagcactggacaaattttttatggcattgagtaattttttgttttatacgatttttgaggaacaaaatgctatt 2645157  T
Q  354 ttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||||||||||||||| ||| |||||| ||||||||||| | ||||||||||||| |||||||||||||||||||    
T  2645156 ttggtattttagacaacttgtatgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttg 2645080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 254 - 430
Target Start/End: Complemental strand, 19513859 - 19513683
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatt 353  Q
    |||||||||||||| | ||||||||||| ||| |||||||||||  |||  |||||||||||||||||||||||  |||||||||||| ||||||| |||    
T  19513859 atagaacagtacaatagaagacagaacagcacgggacaaattttttatggtattgagtaattttttgttttatatgatttttgagggacaaaatgctatt 19513760  T
Q  354 ttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||||||||||||||| |||||||||| ||||||||||| | ||||||||||||| |||||||||||||||||||    
T  19513759 ttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttg 19513683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 219 - 430
Target Start/End: Original strand, 17540589 - 17540811
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattg 308  Q
    |||||||||||||||||||||||||| |||| ||||          ||||||||||||||||||| ||||||| |||| |||| |||||  ||| |||||    
T  17540589 gtgtttggtttgcaaaacagcaagtactggatagaacagtataagatagaacagtacaacacaaggcagaacagcacatgacatattttttatggcattg 17540688  T
Q  309 agtaattttttgttttatacaatttttgagggagaaaatgcaatttt-ggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtg 407  Q
    |||||||||||||||||||| |||||||||||| ||||| | ||||| |||||||||||||||| |||||||||| ||||||||||| | ||||||||||    
T  17540689 agtaattttttgttttatacgatttttgagggacaaaatactatttttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtg 17540788  T
Q  408 aggaacaaaaatatgagtttttg 430  Q
    ||| |||||||||||||||||||    
T  17540789 agggacaaaaatatgagtttttg 17540811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 219 - 430
Target Start/End: Original strand, 2085947 - 2086168
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattg 308  Q
    |||||||||||||||||||||||||| |||||||||          ||||||||||||||||||| |||||||||||| ||||||||||  ||| |||||    
T  2085947 gtgtttggtttgcaaaacagcaagtactggacagaacagtacaagatagaacagtacaacacaaggcagaacaacacatgacaaattttttatgccattg 2086046  T
Q  309 agtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtga 408  Q
    |||||||||||||||||||| |||||||||||| ||||||  |||||||||||| |||||||| |||||||  | ||||||||||  | ||||||||  |    
T  2086047 agtaattttttgttttatacgatttttgagggacaaaatgttattttggtatttcagacaacttgtacgtgaaacaaaaagttgtactgtggtttgggta 2086146  T
Q  409 ggaacaaaaatatgagtttttg 430  Q
    || |||||||||||||||||||    
T  2086147 gggacaaaaatatgagtttttg 2086168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 256 - 430
Target Start/End: Original strand, 26418845 - 26419019
Alignment:
Q  256 agaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatttt 355  Q
    ||||||| ||||| |||| |||||||||||| ||||||  ||  ||| || |||||||||||||||||||||||||||||| |||| ||||||  |||||    
T  26418845 agaacagcacaacgcaaggcagaacaacacatgacaaaaattttatggcaatgagtaattttttgttttatacaatttttgggggataaaatgttatttt 26418944  T
Q  356 ggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||||||||||||| |||||||||| ||||||||||| | |||||||||||||||||||||||||||||||||    
T  26418945 ggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgaggaacaaaaatatgagtttttg 26419019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 254 - 430
Target Start/End: Original strand, 7258816 - 7258993
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgaggga-gaaaatgcaat 352  Q
    |||||||||||||||||||| ||||| |  ||| ||||||||||  ||| ||||||||||||||||||||||||||||||||||||||  ||||||  ||    
T  7258816 atagaacagtacaacacaaggcagaatagtacatgacaaattttttatggcattgagtaattttttgttttatacaatttttgagggacaaaaatgttat 7258915  T
Q  353 tttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    ||||||||||||||||||| ||||||| || ||||||||||| | ||||||||||||| |||||||||||||||||||    
T  7258916 tttggtattttagacaacttgtacgtgagacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttg 7258993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 219 - 430
Target Start/End: Original strand, 4641391 - 4641612
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattg 308  Q
    ||||||| |||||||||||||||||| |||||||||          ||||||||||||||| ||| |||||||||||||||||||||||  ||  |||||    
T  4641391 gtgtttgctttgcaaaacagcaagtactggacagaacagtaaaatatagaacagtacaacataaggcagaacaacacaggacaaattttttataccattg 4641490  T
Q  309 agtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtga 408  Q
    |||||||||||||||||||| |||||||||| | ||||||| |||||||||||||| |||||| ||| ||| || ||||||||||| | |||||||||||    
T  4641491 agtaattttttgttttatacgatttttgaggaacaaaatgctattttggtattttaaacaacttgtatgtgagacaaaaagttgtgctgtggtttggtga 4641590  T
Q  409 ggaacaaaaatatgagtttttg 430  Q
    |  |||||||||||| ||||||    
T  4641591 gagacaaaaatatgaatttttg 4641612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 219 - 430
Target Start/End: Original strand, 37308531 - 37308751
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattg 308  Q
    ||||||||||||||||||| |||||| |||||||||          ||||||||||||||||||| |||||||||||| ||||||||||  ||| |||||    
T  37308531 gtgtttggtttgcaaaacaacaagtactggacagaacagtacaagatagaacagtacaacacaaggcagaacaacacatgacaaattttttatggcattg 37308630  T
Q  309 agtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtga 408  Q
    |||||||||||  ||| ||| |||||| ||||| ||||| | ||||||||||||||||||| | |||||||||| ||||||||||| | |||||||||||    
T  37308631 agtaatttttttgttt-tacgattttttagggacaaaatactattttggtattttagacaatttgtacgtgggacaaaaagttgtgttgtggtttggtga 37308729  T
Q  409 ggaacaaaaatatgagtttttg 430  Q
    || |||||||||||||||||||    
T  37308730 gggacaaaaatatgagtttttg 37308751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 300 - 430
Target Start/End: Complemental strand, 7761697 - 7761567
Alignment:
Q  300 atgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatg 399  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||| ||||||| || ||||||||||| | ||    
T  7761697 atgacattgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgagacaaaaagttgtgctgtg 7761598  T
Q  400 gtttggtgaggaacaaaaatatgagtttttg 430  Q
    ||||||||||| |||||||||||||||||||    
T  7761597 gtttggtgagggacaaaaatatgagtttttg 7761567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 219 - 430
Target Start/End: Complemental strand, 37004084 - 37003862
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacaca-ggacaaattttgcatgacatt 307  Q
    |||||||||||||||||||||||||| | |||||||          ||||||||||||| |||||  | |||| |||| |||||||||||  ||| ||||    
T  37004084 gtgtttggtttgcaaaacagcaagtactagacagaacagtataagatagaacagtacaatacaaggtaaaacagcacaaggacaaattttttatggcatt 37003985  T
Q  308 gagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtg 407  Q
    || ||||||||| |||||||| |||||||||||| ||||||  ||||||||||||||||||| | |||||||||| ||||||||||| | ||||||||||    
T  37003984 gaataattttttattttatacgatttttgagggacaaaatgttattttggtattttagacaatttgtacgtgggacaaaaagttgtgttgtggtttggtg 37003885  T
Q  408 aggaacaaaaatatgagtttttg 430  Q
    ||| |||||||||||||||||||    
T  37003884 agggacaaaaatatgagtttttg 37003862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 219 - 430
Target Start/End: Complemental strand, 30326546 - 30326326
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattg 308  Q
    ||||||||||||||||| |||||||| |||||||||          |||||| |||||||||||| ||||||| ||||||||||| |||  |||  ||||    
T  30326546 gtgtttggtttgcaaaagagcaagtactggacagaacagtacaagatagaaccgtacaacacaaggcagaacagcacaggacaaaatttttatggaattg 30326447  T
Q  309 agtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtga 408  Q
    |||||||||||||||||||| |||||||||||| ||||| | ||||||||||||||||||||| ||||||| || ||||||||||| | |||||||| ||    
T  30326446 agtaattttttgttttatacgatttttgagggacaaaatactattttggtattttagacaacttgtacgtgagacaaaaagttgtgctgtggtttggcga 30326347  T
Q  409 ggaacaaaaatatgagtttttg 430  Q
    |  || ||||||||||||||||    
T  30326346 gagac-aaaatatgagtttttg 30326326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 219 - 430
Target Start/End: Original strand, 9717116 - 9717320
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaatagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttt 318  Q
    |||||||||||||||||||||||||| |||||||||     |||||||| | |  |||| |||||||  || ||| |||  ||| ||||| |||||||||    
T  9717116 gtgtttggtttgcaaaacagcaagtactggacagaa-----cagtacaagatagaacagtacaacac--gataaaatttttatggcattgggtaattttt 9717208  T
Q  319 tgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaa 418  Q
    ||||| |||| |||||||||||| ||||| | ||||||||||||||||||||| |||||||||| ||||||||||| | ||||||||||||| |||||||    
T  9717209 tgtttgatacgatttttgagggacaaaatactattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaa 9717308  T
Q  419 tatgagtttttg 430  Q
     |||||||||||    
T  9717309 catgagtttttg 9717320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 254 - 394
Target Start/End: Original strand, 39461234 - 39461374
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatt 353  Q
    |||||||||||||||||||| ||||||| |||| ||||||||||  ||| |||||||||||||||| |||||||| |||||||||||| ||||||| |||    
T  39461234 atagaacagtacaacacaaggcagaacagcacatgacaaattttttatggcattgagtaattttttattttatacgatttttgagggacaaaatgctatt 39461333  T
Q  354 ttggtattttagacaactagtacgtgggataaaaagttgtg 394  Q
    ||||||||||||||| || ||||||| ||||||||||||||    
T  39461334 ttggtattttagacagcttgtacgtgagataaaaagttgtg 39461374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 254 - 430
Target Start/End: Original strand, 42365497 - 42365673
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatt 353  Q
    |||||||||||||||||||| |||||||||||| || |||||||  ||| ||||||||||||||||||||||||  ||||||  |||| ||||||  |||    
T  42365497 atagaacagtacaacacaaggcagaacaacacaagataaattttttatggcattgagtaattttttgttttatatgatttttaggggacaaaatgttatt 42365596  T
Q  354 ttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||||||||||||||| || ||||  ||||||||||||| | ||||||| ||| | |||||||||||||||||||    
T  42365597 ttggtattttagacaacttgtccgtgatataaaaagttgtgttgtggtttgatgaaggacaaaaatatgagtttttg 42365673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 256 - 430
Target Start/End: Complemental strand, 28824724 - 28824551
Alignment:
Q  256 agaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatttt 355  Q
    ||||||| |||||| |||||||||||| ||| ||||||||||  ||||||| || ||| |||||||||||||||||||||| ||    |||||| |||||    
T  28824724 agaacagcacaacataagacagaacaatacatgacaaattttt-atgacatggaataaatttttgttttatacaatttttggggtgcgaaatgctatttt 28824626  T
Q  356 ggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
     ||||||||||||||| | ||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  28824625 agtattttagacaacttgcacgtgagataaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttg 28824551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 254 - 430
Target Start/End: Original strand, 40692225 - 40692393
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatt 353  Q
    |||||||||||||||||||| || |||| |||||||||||||||  ||| |||||| |||||||||||||||||| |||||||||||| |||||||        
T  40692225 atagaacagtacaacacaaggcaaaacagcacaggacaaattttttatggcattgaataattttttgttttatacgatttttgagggacaaaatgc---- 40692320  T
Q  354 ttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
        |||||||||||||| |||||||||| ||||||||||  | ||||||||||||| ||||||||| |||||||||    
T  40692321 ----tattttagacaacttgtacgtgggacaaaaagttgttctgtggtttggtgagggacaaaaatacgagtttttg 40692393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 303 - 430
Target Start/End: Complemental strand, 12672595 - 12672468
Alignment:
Q  303 acattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtt 402  Q
    |||||||||||||||||||||||||| |||||||  ||| ||||||| ||||||||||||||||||||| |||| ||||||||||| ||||| | |||||    
T  12672595 acattgagtaattttttgttttatacgatttttggaggacaaaatgctattttggtattttagacaacttgtacttgggataaaaacttgtgttgtggtt 12672496  T
Q  403 tggtgaggaacaaaaatatgagtttttg 430  Q
    |||||||| ||||||||||||| |||||    
T  12672495 tggtgagggacaaaaatatgagattttg 12672468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 264 - 430
Target Start/End: Complemental strand, 3913619 - 3913454
Alignment:
Q  264 acaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggag-aaaatgcaattttggtattt 362  Q
    |||||||||| |||||||||| |||| |||||||  ||| |||||| |||| ||||||||||||| ||||||| ||||| ||||||| ||||||||||||    
T  3913619 acaacacaaggcagaacaacataggataaattttt-atggcattgaataatattttgttttatacgatttttg-gggagcaaaatgctattttggtattt 3913522  T
Q  363 tagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    ||||||||| |||||||| | ||||||||||| | ||||||||||||| ||||| || ||||||||||    
T  3913521 tagacaacttgtacgtggaacaaaaagttgtgttgtggtttggtgagggacaaacatgtgagtttttg 3913454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 219 - 430
Target Start/End: Complemental strand, 12939506 - 12939294
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaatagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagta--attt 316  Q
    ||||||||||||||||| || |||||  | |||  | ||||||| |||||||||| |||||||||||| || |||||||  || ||||||| ||   |||    
T  12939506 gtgtttggtttgcaaaatagtaagtaccgtacaagacagaacagcacaacacaaggcagaacaacacaagataaatttt-aataacattgaatattgttt 12939408  T
Q  317 tttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaa 416  Q
    |||||||||||  ||||||| |||| ||||||  |||||||||| |||||||||| ||||||| |||||||||||||| | ||||||||||| | |||||    
T  12939407 tttgttttatatgatttttgggggacaaaatgttattttggtatcttagacaacttgtacgtgagataaaaagttgtgctgtggtttggtgaaggacaaa 12939308  T
Q  417 aatatgagtttttg 430  Q
    ||||| ||||||||    
T  12939307 aatatcagtttttg 12939294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 222 - 430
Target Start/End: Complemental strand, 32766706 - 32766498
Alignment:
Q  222 tttggtttgcaaaacagcaagtattggacagaatagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgt 321  Q
    ||||||||| | ||||||||||| || |||  | ||||||  ||||  ||||  ||||||||||||||||||||||  ||| |||||| |||||||||||    
T  32766706 tttggtttgtagaacagcaagtactgtacaagaaagaacaacacaatgcaagggagaacaacacaggacaaattttt-atggcattgaataattttttgt 32766608  T
Q  322 tttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtggga-taaaaagttgtgatatggtttggtgaggaacaaaaata 420  Q
    ||||||| |||||||  |||  |||||  ||||||||||||||||||||  |||||| |||  ||||||||||| | ||||||||||||| |||||||||    
T  32766607 tttatacgatttttggaggacgaaatgttattttggtattttagacaacctgtacgtaggacaaaaaagttgtgttgtggtttggtgagggacaaaaata 32766508  T
Q  421 tgagtttttg 430  Q
    | ||||||||    
T  32766507 tcagtttttg 32766498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 264 - 430
Target Start/End: Original strand, 11114803 - 11114968
Alignment:
Q  264 acaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtatttt 363  Q
    ||||||||||||||||||| | | || |||||||  ||| |||||| |||||||| ||||||||| ||| ||   |||  |||| | ||||||| |||||    
T  11114803 acaacacaagacagaacaatataagaaaaattttt-atggcattgaataatttttcgttttatacgattgttagcggacgaaatactattttggaatttt 11114901  T
Q  364 agacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||||| || ||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||    
T  11114902 agacaacttgtgcgtgggacaaaaagttgtgatgtggtttggtgaggaacaaaaatatgattttttg 11114968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 256 - 430
Target Start/End: Original strand, 13829361 - 13829534
Alignment:
Q  256 agaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatttt 355  Q
    ||||||| |||||||||| ||||||| ||||| |||||||||  |||| ||||| |||||||||||||||||  ||||||||||||  |||||  |||||    
T  13829361 agaacagcacaacacaaggcagaacatcacagaacaaattttt-atgatattgaataattttttgttttatatgatttttgagggacgaaatgatatttt 13829459  T
Q  356 ggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    ||| ||||||| |||| |||| ||||| ||||||||||||| |||| | |||| | |||||||| | ||||||||    
T  13829460 ggtgttttagataacttgtacctgggacaaaaagttgtgatgtggtctagtgatggacaaaaatttcagtttttg 13829534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 253 - 379
Target Start/End: Complemental strand, 18793432 - 18793306
Alignment:
Q  253 aatagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaat 352  Q
    ||||||||||||||||| |||  |||||| |||| ||||||||||  |||  ||||||||||||||||||||||||||||||||  ||| ||||||  ||    
T  18793432 aatagaacagtacaacataaggtagaacatcacaagacaaattttttatgggattgagtaattttttgttttatacaatttttggaggacaaaatgttat 18793333  T
Q  353 tttggtattttagacaactagtacgtg 379  Q
    ||||||||||||||||||| |||||||    
T  18793332 tttggtattttagacaacttgtacgtg 18793306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 430
Target Start/End: Original strand, 8112247 - 8112396
Alignment:
Q  283 cacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgaggg-agaaaatgcaattttggta-ttttagacaactagtacgtgg 380  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||| |||||| |||| | ||||||  ||||||||| |||||||| | | |||  |||    
T  8112247 cacatgacaaattttgtatgacattgagtaattttttgttttatacgatttttaagggaaaaaaatgttattttggtatttttagactatttgtatctgg 8112346  T
Q  381 gataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
     | ||||||||||| | ||||||||||||  |||||||||||||||||||    
T  8112347 aacaaaaagttgtgttgtggtttggtgagagacaaaaatatgagtttttg 8112396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 264 - 427
Target Start/End: Complemental strand, 16178040 - 16177880
Alignment:
Q  264 acaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtatttt 363  Q
    ||||||||||| ||||||||||| ||||||||||  ||  |||||| |||  ||||||||||||| ||||||| ||||  |||| | |||||||||||||    
T  16178040 acaacacaagatagaacaacacacgacaaatttt-tatagcattgaataa--ttttgttttatacgatttttgggggacgaaattccattttggtatttt 16177944  T
Q  364 agacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagttt 427  Q
    |||||||| ||||||| || ||||||||||| | ||||||||| ||  |||||||||| |||||    
T  16177943 agacaacttgtacgtgagacaaaaagttgtgttgtggtttggtaagcgacaaaaatatcagttt 16177880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 254 - 430
Target Start/End: Complemental strand, 40832640 - 40832463
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaatt--ttttgttttatacaatttttgagggagaaaatgcaa 351  Q
    ||||||||| ||||||||||  ||||||||||| ||||||||||  ||   ||||| | |||  ||||||||||||| ||||||| ||||  |||| | |    
T  40832640 atagaacagcacaacacaaggtagaacaacacatgacaaattttt-atattattgaattattatttttgttttatacgatttttgggggacgaaatacta 40832542  T
Q  352 ttttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||||||||||||| ||| ||||||| || ||||||||||| | ||||||||||||| ||||||||||  |||||||    
T  40832541 ttttggtattttagactacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacaaaaatatccgtttttg 40832463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 264 - 429
Target Start/End: Original strand, 6896099 - 6896263
Alignment:
Q  264 acaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtatttt 363  Q
    |||||||||| || ||||||||| ||||||||||  |||  ||||| |||||| ||||||||||    ||||| ||||  |||||| |||||||| ||||    
T  6896099 acaacacaaggcataacaacacatgacaaattttt-atggtattgaataatttcttgttttatatgccttttgggggacgaaatgctattttggtgtttt 6896197  T
Q  364 agacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagttttt 429  Q
    |||||||| |||||||||| ||||||||||| | | ||||||||||| |||||||| | |||||||    
T  6896198 agacaacttgtacgtgggacaaaaagttgtgctgttgtttggtgagggacaaaaatttcagttttt 6896263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 304 - 430
Target Start/End: Complemental strand, 10399990 - 10399864
Alignment:
Q  304 cattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggttt 403  Q
    |||||| |||||||||||||||||| | ||||| |||| ||||||| |||||||  ||||||||||||  ||| || || ||||||||||| | ||||||    
T  10399990 cattgaataattttttgttttatacgacttttgggggacaaaatgctattttggatttttagacaacttatacatgagacaaaaagttgtgttgtggttt 10399891  T
Q  404 ggtgaggaacaaaaatatgagtttttg 430  Q
     |||| | |||||||||||||||||||    
T  10399890 agtgaaggacaaaaatatgagtttttg 10399864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 219 - 420
Target Start/End: Complemental strand, 27463014 - 27462806
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattgga----------cagaatagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattg 308  Q
    |||||||||||||||||||||||||||||||          || || ||||||| ||||||||||  ||||||||||| |||||| |||  |||||||||    
T  27463014 gtgtttggtttgcaaaacagcaagtattggataaaacagtgcaaaacagaacagcacaacacaaggtagaacaacacatgacaaa-tttatatgacattg 27462916  T
Q  309 agtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtga 408  Q
    | |||||||||||||| ||| ||||||  || |  |||||| ||||||||||||| |||||   ||| | | |||||||||||||| | |||||||||||    
T  27462915 aataattttttgtttt-tacgatttttagggcacgaaatgctattttggtatttttgacaatatgtatg-gtgataaaaagttgtgttgtggtttggtga 27462818  T
Q  409 ggaacaaaaata 420  Q
    || |||||||||    
T  27462817 gggacaaaaata 27462806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 254 - 419
Target Start/End: Complemental strand, 38993237 - 38993076
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatt 353  Q
    |||| |||| |||||| ||| |||||||||||| ||||||||    |||  ||||| ||||||| ||| |||||  ||||||| | ||  |||||| |||    
T  38993237 ataggacagcacaacataaggcagaacaacacaagacaaatt----atggtattgaataattttctgtattatattatttttgggtgacgaaatgctatt 38993142  T
Q  354 ttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaat 419  Q
    || ||||||||||||||| |||||||||| ||||||||||| | |||||||  |||||||||||||    
T  38993141 tttgtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttgacgaggaacaaaaat 38993076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 352 - 430
Target Start/End: Complemental strand, 26981781 - 26981703
Alignment:
Q  352 ttttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||||||||||||||||| |||||| | | |||||||| || | ||||||||||||| |||||||||||||||||||    
T  26981781 ttttggtattttagacaacttgtacgtagaacaaaaagttttgttgtggtttggtgagggacaaaaatatgagtttttg 26981703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 358 - 430
Target Start/End: Original strand, 1247171 - 1247243
Alignment:
Q  358 tattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||||||||||| |||||||||| |||||||||||   ||||||||||||| ||||||||||||| |||||    
T  1247171 tattttagacaacttgtacgtgggacaaaaagttgtgcagtggtttggtgagggacaaaaatatgagattttg 1247243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 264 - 409
Target Start/End: Original strand, 20907520 - 20907664
Alignment:
Q  264 acaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtatttt 363  Q
    ||||||||||  ||||||||| | ||||||||||  ||| |||||| |||||||||||||| ||| ||||||| |||| ||||||  ||||| |||||||    
T  20907520 acaacacaagggagaacaacatatgacaaattttt-atgtcattgaataattttttgttttgtacgatttttgggggataaaatgttattttagtatttt 20907618  T
Q  364 agacaactagtacgtgggataaaaagttgtgatatggtttggtgag 409  Q
    | |||| | |||| | ||| ||||| ||||  | ||||||||||||    
T  20907619 atacaatttgtacataggacaaaaaattgttctgtggtttggtgag 20907664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 305 - 394
Target Start/End: Original strand, 30712828 - 30712916
Alignment:
Q  305 attgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtg 394  Q
    ||||| |||||||||||||||||  ||||||| ||||  |||||  |||||||| ||||||||||||  |||||||||||||||||||||    
T  30712828 attgaataattttttgttttatatgatttttg-gggatgaaatgatattttggtgttttagacaacttctacgtgggataaaaagttgtg 30712916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 258 - 336
Target Start/End: Complemental strand, 26981856 - 26981777
Alignment:
Q  258 aacagtacaacacaagacagaacaacacaggacaaattttgc-atgacattgagtaattttttgttttatacaatttttg 336  Q
    ||||| |||||||||| ||||||| ||||||| |||||||   |||||| |||||||||||||||||||||| |||||||    
T  26981856 aacagcacaacacaaggcagaacagcacaggataaatttttttatgacaatgagtaattttttgttttatacgatttttg 26981777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 351 - 430
Target Start/End: Complemental strand, 41366183 - 41366104
Alignment:
Q  351 attttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    ||||||||||||||||||||| ||| ||| || ||||| ||||| | ||||||||||||| |||||||| | ||||||||    
T  41366183 attttggtattttagacaacttgtatgtgagacaaaaaattgtgttgtggtttggtgagggacaaaaatttcagtttttg 41366104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 271 - 422
Target Start/End: Complemental strand, 45463261 - 45463112
Alignment:
Q  271 aagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaac 370  Q
    |||| ||||||||||| ||||||||||   || |||| | |||||||||||||||||| |||| || ||||  |||||  |||||| ||||||||||||     
T  45463261 aagaaagaacaacacatgacaaatttttattg-cattaaataattttttgttttatacgatttctg-gggacgaaatgttattttgatattttagacaat 45463164  T
Q  371 tagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatg 422  Q
      ||||||  || ||||||||||| | ||||||||||||  |||||||||||    
T  45463163 ctgtacgtatgacaaaaagttgtgttgtggtttggtgagtgacaaaaatatg 45463112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 363 - 430
Target Start/End: Complemental strand, 38623365 - 38623298
Alignment:
Q  363 tagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    ||||||||| ||| |||||| ||||||||||| | ||||||||||||| |||||||| | ||||||||    
T  38623365 tagacaacttgtatgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatttcagtttttg 38623298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 258 - 388
Target Start/End: Complemental strand, 35473165 - 35473036
Alignment:
Q  258 aacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttgg 357  Q
    |||| ||||| |||||  ||||||||| | ||||||||||| |||  ||| | |||||||| || |||||||| |||| | ||| |||| |  ||| |||    
T  35473165 aacaatacaatacaagttagaacaacatatgacaaattttg-atggtattaaataatttttggtcttatacaaatttttatggacaaaaggatattatgg 35473067  T
Q  358 tattttagacaactagtacgtgggataaaaa 388  Q
    |||||||||||||| |||||||||| |||||    
T  35473066 tattttagacaacttgtacgtgggacaaaaa 35473036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 313 - 430
Target Start/End: Original strand, 41934560 - 41934677
Alignment:
Q  313 attttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaa 412  Q
    ||||| ||| |||||  |||||||  ||| ||||||  |||||||||||||||||||||  ||||| ||| ||||||||||| | |||||| |||| | |    
T  41934560 attttatgtcttatatgatttttggtggacaaaatgttattttggtattttagacaacttatacgtaggacaaaaagttgtgttgtggtttagtgaagta 41934659  T
Q  413 caaaaatatgagtttttg 430  Q
    ||| ||| | ||||||||    
T  41934660 caagaatttcagtttttg 41934677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 136; Significance: 9e-71; HSPs: 77)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 219 - 430
Target Start/End: Complemental strand, 33553035 - 33552829
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaatagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttt 318  Q
    |||||||||||||||||||||||||| |||||||||     |||||||||||||| || ||||||||||||||||||||  ||| |||||||||||||||    
T  33553035 gtgtttggtttgcaaaacagcaagtactggacagaa-----cagtacaacacaaggcaaaacaacacaggacaaattttttatggcattgagtaattttt 33552941  T
Q  319 tgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaa 418  Q
    |||||||||| |||||||||||| ||||||| ||||||||||||||||||||| |||||||||| ||||||||||| | ||||||||||||| |||||||    
T  33552940 tgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaa 33552841  T
Q  419 tatgagtttttg 430  Q
    ||||||||||||    
T  33552840 tatgagtttttg 33552829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 219 - 430
Target Start/End: Complemental strand, 20802739 - 20802518
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattg 308  Q
    |||||||||||||||||||||||||| || ||||||          ||||||||||||||||||| |||||||||||||||||||||||  ||| |||||    
T  20802739 gtgtttggtttgcaaaacagcaagtactgaacagaacagtacaagatagaacagtacaacacaaggcagaacaacacaggacaaattttttatggcattg 20802640  T
Q  309 agtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtga 408  Q
    |||||||||||||||||||  |||||||||||| ||||||| ||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||    
T  20802639 agtaattttttgttttatatgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgatgtggtttggtga 20802540  T
Q  409 ggaacaaaaatatgagtttttg 430  Q
    || |||||||||||||||||||    
T  20802539 gggacaaaaatatgagtttttg 20802518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 219 - 430
Target Start/End: Complemental strand, 2725325 - 2725120
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaatagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttt 318  Q
    |||||||||||||||||||||||||| |||||||||     || || | |||||| ||||||| |||||||||||||||  |||||||||||||||||||    
T  2725325 gtgtttggtttgcaaaacagcaagtactggacagaa-----caatatagcacaaggcagaacagcacaggacaaattttttatgacattgagtaattttt 2725231  T
Q  319 tgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaa 418  Q
    |||||||||| |||||||||||| ||||||| ||||||||||||||||||||| |||||| ||| ||||||||||||| ||||||||||||| |||||||    
T  2725230 tgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgt-ggacaaaaagttgtgatgtggtttggtgagggacaaaaa 2725132  T
Q  419 tatgagtttttg 430  Q
    ||||||||||||    
T  2725131 tatgagtttttg 2725120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 219 - 430
Target Start/End: Original strand, 23521758 - 23521979
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaatag----------aacagtacaacacaagacagaacaacacaggacaaattttgcatgacattg 308  Q
    |||||||||||||||||||||||||| ||||||||| ||          |||||||||||||||| ||||||| |||| ||||||||||  ||| |||||    
T  23521758 gtgtttggtttgcaaaacagcaagtactggacagaacagtacaagataaaacagtacaacacaaggcagaacagcacatgacaaattttttatggcattg 23521857  T
Q  309 agtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtga 408  Q
    |||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||| |||||||||| ||||||||||| | |||||||||||    
T  23521858 agtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtga 23521957  T
Q  409 ggaacaaaaatatgagtttttg 430  Q
    || |||||||||||||||||||    
T  23521958 gggacaaaaatatgagtttttg 23521979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 219 - 430
Target Start/End: Original strand, 43640977 - 43641198
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattg 308  Q
    |||||||||||||||||||||||||| | |||||||          ||||||||||||||||||| ||||||| ||||||||||| |||  ||| |||||    
T  43640977 gtgtttggtttgcaaaacagcaagtactagacagaacagtacaagatagaacagtacaacacaaggcagaacagcacaggacaaaatttttatggcattg 43641076  T
Q  309 agtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtga 408  Q
    |||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||| |||||||||| ||||||||||| | |||||||||||    
T  43641077 agtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtga 43641176  T
Q  409 ggaacaaaaatatgagtttttg 430  Q
    || |||||||||||||||||||    
T  43641177 gggacaaaaatatgagtttttg 43641198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 219 - 430
Target Start/End: Original strand, 24002216 - 24002438
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattg 308  Q
    |||||||||||||||||||||||||| |||||||||          ||||||||||||||||||| ||||||| |||||||||||||||   || |||||    
T  24002216 gtgtttggtttgcaaaacagcaagtactggacagaacagtacaagatagaacagtacaacacaaggcagaacagcacaggacaaattttttttggcattg 24002315  T
Q  309 agtaattttttgttttatacaatttttgagggagaaaa-tgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtg 407  Q
    |||||||||||||||||||| |||||||||||| |||| ||| ||||||||||||||||||||| |||||||||| ||||||||||| | ||||||||||    
T  24002316 agtaattttttgttttatacgatttttgagggacaaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtg 24002415  T
Q  408 aggaacaaaaatatgagtttttg 430  Q
    ||| |||||||||||||||||||    
T  24002416 agggacaaaaatatgagtttttg 24002438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 219 - 430
Target Start/End: Complemental strand, 49152307 - 49152087
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattg 308  Q
    |||||||||||||||||||||||||| |||||||||          ||||||||||||||||||| ||||||| |||||||||||||||  ||| |||||    
T  49152307 gtgtttggtttgcaaaacagcaagtactggacagaacagtataagatagaacagtacaacacaaggcagaacagcacaggacaaattttttatggcattg 49152208  T
Q  309 agtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtga 408  Q
    |||||||||||||||||||| |||||||| ||| ||||||  |||||||| |||||||||||| |||||||||||||||||||||| | |||||||||||    
T  49152207 agtaattttttgttttatacgatttttgatggacaaaatgttattttggt-ttttagacaacttgtacgtgggataaaaagttgtgttgtggtttggtga 49152109  T
Q  409 ggaacaaaaatatgagtttttg 430  Q
    || |||||||||||||||||||    
T  49152108 gggacaaaaatatgagtttttg 49152087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 219 - 430
Target Start/End: Original strand, 21579904 - 21580125
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattg 308  Q
    |||||||||||||||||||| ||||| |||||||||          ||||||||||||||||||| |||||||||||||||||||||||  |||  ||||    
T  21579904 gtgtttggtttgcaaaacagtaagtactggacagaacagtataagatagaacagtacaacacaaggcagaacaacacaggacaaattttttatggtattg 21580003  T
Q  309 agtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtga 408  Q
    |||||||||| ||||||||| |||||||||||| || |||| ||||||||||||||||||| | ||||||| || ||||||||||||| |||||||||||    
T  21580004 agtaatttttagttttatacgatttttgagggacaacatgctattttggtattttagacaatttgtacgtgagacaaaaagttgtgatgtggtttggtga 21580103  T
Q  409 ggaacaaaaatatgagtttttg 430  Q
    || |||||||||||||||||||    
T  21580104 gggacaaaaatatgagtttttg 21580125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 219 - 430
Target Start/End: Original strand, 56154499 - 56154720
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattg 308  Q
    ||||||||||||||||||| |||||| |||||||||          ||||||||||||||||||| |||||||  ||| ||||||||||  ||| |||||    
T  56154499 gtgtttggtttgcaaaacaacaagtactggacagaacagtataagatagaacagtacaacacaaggcagaacagtacatgacaaattttttatggcattg 56154598  T
Q  309 agtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtga 408  Q
    |||||||||||||||||||  |||||||||||| ||||||| ||||||||||||||||||||| |||||||||| ||||||||||| | |||||||||||    
T  56154599 agtaattttttgttttatatgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtga 56154698  T
Q  409 ggaacaaaaatatgagtttttg 430  Q
    || |||||||||||||||||||    
T  56154699 gggacaaaaatatgagtttttg 56154720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 254 - 430
Target Start/End: Complemental strand, 29785700 - 29785524
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatt 353  Q
    |||||||||||||||||||| ||||||| |||| ||||||||||  ||| |||||| |||||||||||||||||| |||||||||||| ||||||| |||    
T  29785700 atagaacagtacaacacaaggcagaacagcacatgacaaattttttatggcattgaataattttttgttttatacgatttttgagggacaaaatgctatt 29785601  T
Q  354 ttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||||||||||||||| |||||||||| |||||| |||| | ||||||||||||| |||||||||||||||||||    
T  29785600 ttggtattttagacaacttgtacgtgggacaaaaagctgtgttgtggtttggtgagggacaaaaatatgagtttttg 29785524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 249 - 430
Target Start/End: Original strand, 54542908 - 54543088
Alignment:
Q  249 acagaatagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatg 348  Q
    |||| |||||||||||||||||||  ||||||| |||| ||||||||||  ||| ||||||||||||||||||||||||| |||||||||||| ||||||    
T  54542908 acaggatagaacagtacaacacaaagcagaacagcacaagacaaattttttatgtcattgagtaattttttgttttatacgatttttgagggacaaaatg 54543007  T
Q  349 caattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
      ||||||||||||||||||||| ||||||||||  |||||||||| ||||||||||||||| |||||||||||||||||||    
T  54543008 atattttggtattttagacaacttgtacgtggga-caaaagttgtgctatggtttggtgagggacaaaaatatgagtttttg 54543088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 254 - 430
Target Start/End: Complemental strand, 33177195 - 33177019
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatt 353  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||  ||| |||||||||||||| |||||||||| ||||||| |||| ||||||  |||    
T  33177195 atagaacagtacaacacaagacagaacaacaaaggacaaatattttatggcattgagtaattttatgttttatacgatttttgggggacaaaatgttatt 33177096  T
Q  354 ttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||||||||||||||| || ||||||| ||||||||||| | ||||||||||||| |||||||||||||||||||    
T  33177095 ttggtattttagacaacttgtgcgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttg 33177019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 254 - 430
Target Start/End: Original strand, 55593808 - 55593984
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatt 353  Q
    |||||||||||||||||||| ||||||||  ||  |||||||||  ||| ||||||||||||||||||||||||| |||||||||||| ||||||  |||    
T  55593808 atagaacagtacaacacaaggcagaacaatgcaaaacaaattttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgttatt 55593907  T
Q  354 ttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||||||||||||||| |||||||||||||||||||||| | ||||||||||||| || ||||||||||||||||    
T  55593908 ttggtattttagacaacttgtacgtgggataaaaagttgtgctgtggtttggtgagggactaaaatatgagtttttg 55593984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 261 - 430
Target Start/End: Complemental strand, 55065488 - 55065320
Alignment:
Q  261 agtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtat 360  Q
    ||||||||||||| ||||||| |||||||||||||||  ||| ||||||||||||||||||||||||| |||||||| ||| ||||||| |||||| |||    
T  55065488 agtacaacacaaggcagaacagcacaggacaaattttt-atggcattgagtaattttttgttttatacgatttttgaaggacaaaatgctattttgatat 55065390  T
Q  361 tttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    ||||||||||| |||||||||| ||||||||||| | ||||||||||||| |||||||||||||||||||    
T  55065389 tttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttg 55065320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 254 - 430
Target Start/End: Complemental strand, 20518185 - 20518009
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatt 353  Q
    |||||| ||||||||||||| ||||||| |||||||||||||||  ||| |||||||||||||||||||||||| ||||||||||||| ||||||| |||    
T  20518185 atagaatagtacaacacaaggcagaacagcacaggacaaattttttatggcattgagtaattttttgttttatagaatttttgagggacaaaatgctatt 20518086  T
Q  354 ttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||||||||||||||| |||||||||| || ||||| || | || |||||||||| |||||||||||| ||||||    
T  20518085 ttggtattttagacaacttgtacgtgggacaagaagttatgctgtgatttggtgagggacaaaaatatgactttttg 20518009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 219 - 430
Target Start/End: Original strand, 36885824 - 36886031
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaatagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagt-aatttt 317  Q
    ||||||||||||||||||||| |||| | |||||||     |||||||| | |  |||| |||||||||||||||||||  ||| |||||||| ||||||    
T  36885824 gtgtttggtttgcaaaacagcgagtactagacagaa-----cagtacaagatagaacagtacaacacaggacaaattttttatggcattgagttaatttt 36885918  T
Q  318 ttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaa 417  Q
    ||||||||||| |||||||||||| ||||||| |||| |||||||||||||| | |||||||||||||||||||||| | ||||||||||||| ||||||    
T  36885919 ttgttttatacgatttttgagggacaaaatgctatttaggtattttagacaatttgtacgtgggataaaaagttgtgctgtggtttggtgagggacaaaa 36886018  T
Q  418 atatgagtttttg 430  Q
    |||||||||||||    
T  36886019 atatgagtttttg 36886031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 254 - 430
Target Start/End: Original strand, 37865676 - 37865852
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatt 353  Q
    |||||||||||||||||||| |||||||||||| ||||| ||||  ||| |||||| |||||||||||||||||| |||| ||||||| ||||||| |||    
T  37865676 atagaacagtacaacacaaggcagaacaacacatgacaatttttttatggcattgaataattttttgttttatacgatttctgagggacaaaatgctatt 37865775  T
Q  354 ttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||||||||||||||| |||| ||||| ||||||||||| | || |||||||||| |||||||||||||||||||    
T  37865776 ttggtattttagacaacttgtacatgggacaaaaagttgtgttgtgatttggtgagggacaaaaatatgagtttttg 37865852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 219 - 430
Target Start/End: Original strand, 12600764 - 12600985
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattg 308  Q
    |||||||||||||||||||||||||| |||||||||          ||||||||||||||||||| ||||||| |||  ||||||||||  ||| |||||    
T  12600764 gtgtttggtttgcaaaacagcaagtactggacagaacagtacaagatagaacagtacaacacaagtcagaacagcacttgacaaattttttatggcattg 12600863  T
Q  309 agtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtga 408  Q
    |||| |||||||||||| || |||||| ||||| ||||||| ||||||||||||||||||||| ||||||| || ||||||||||| | ||||||| |||    
T  12600864 agtagttttttgttttaaacgattttttagggacaaaatgctattttggtattttagacaacttgtacgtgagacaaaaagttgtgttgtggtttgatga 12600963  T
Q  409 ggaacaaaaatatgagtttttg 430  Q
    || |||||||||||||||||||    
T  12600964 gggacaaaaatatgagtttttg 12600985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 219 - 428
Target Start/End: Original strand, 52319204 - 52319420
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattg 308  Q
    |||||||||||||||||||||||||| |||||| ||          ||||||||||||||||||| |||||||||||||||||||||||  ||| |||||    
T  52319204 gtgtttggtttgcaaaacagcaagtactggacataacagtacaagatagaacagtacaacacaaggcagaacaacacaggacaaattttttatggcattg 52319303  T
Q  309 agtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtga 408  Q
    ||||||||   ||||||||| |||||||||||| ||||||  ||||||  ||||||||||||| |||||||||| ||||||||||| | |||||||||||    
T  52319304 agtaattt---gttttatacgatttttgagggacaaaatgttattttgacattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtga 52319400  T
Q  409 ggaacaaaaatatgagtttt 428  Q
    || |||||||||||||||||    
T  52319401 gggacaaaaatatgagtttt 52319420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 221 - 430
Target Start/End: Original strand, 36497112 - 36497316
Alignment:
Q  221 gtttggtttgcaaaacagcaagtattggacagaatagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttg 320  Q
    |||||||||||||||||||||||| |||||| ||     |||||||||||||| |||||||||||||||||||   |  ||  ||||||||||||||||     
T  36497112 gtttggtttgcaaaacagcaagtactggacataa-----cagtacaacacaaggcagaacaacacaggacaaaaaatttatagcattgagtaatttttta 36497206  T
Q  321 ttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaata 420  Q
    |||||||| |||||||||||| | ||||| |||||| |||||||||||||| ||| || ||| ||||||||||||| ||||||||||||| |||||||||    
T  36497207 ttttatacgatttttgagggacagaatgctattttgatattttagacaacttgtatgttggacaaaaagttgtgatgtggtttggtgagggacaaaaata 36497306  T
Q  421 tgagtttttg 430  Q
    ||||||||||    
T  36497307 tgagtttttg 36497316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 254 - 430
Target Start/End: Original strand, 6776501 - 6776677
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatt 353  Q
    |||||||||||||||||||| ||||||| |||||||||||||||  ||| ||||||||||||||||||||||||| |||||| || || ||||||  |||    
T  6776501 atagaacagtacaacacaaggcagaacagcacaggacaaattttttatggcattgagtaattttttgttttatacgattttttagagacaaaatgatatt 6776600  T
Q  354 ttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    ||| | ||||||||||||  ||||||||| ||||||||||| | ||||||||||||| |||||||||||||||||||    
T  6776601 ttgatgttttagacaacttttacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttg 6776677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 254 - 430
Target Start/End: Complemental strand, 9512503 - 9512327
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatt 353  Q
    |||||| ||| ||||| ||||||||| | |||| ||||||||||  ||| ||||||||||||||||||||||||  |||||||||||| ||||||| |||    
T  9512503 atagaatagtgcaacaaaagacagaatagcacatgacaaattttttatggcattgagtaattttttgttttatatgatttttgagggacaaaatgctatt 9512404  T
Q  354 ttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||||||||||||||| |||||||||| ||||||||||| | ||||||||||| | |||||||||||||||||||    
T  9512403 ttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgaaggacaaaaatatgagtttttg 9512327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 219 - 430
Target Start/End: Original strand, 20694254 - 20694470
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaatagaaca-----gtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaa 313  Q
    |||||||||||||||||||| ||||| |||| |||| || |||     | |||||||||| ||||| | |||| ||||||||||| ||| || |||||||    
T  20694254 gtgtttggtttgcaaaacagtaagtaatggatagaacagtacaagatagaacaacacaaggcagaatagcacatgacaaattttgtatggcaatgagtaa 20694353  T
Q  314 ttttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaac 413  Q
    |||||||||||||| |||||||| |||| ||||||| ||||||||||||||||||||| |||||| ||| ||||||||| | | ||||||||||||| ||    
T  20694354 ttttttgttttatataatttttgggggacaaaatgctattttggtattttagacaacttgtacgttggacaaaaagttgcgttgtggtttggtgagggac 20694453  T
Q  414 aaaaatatgagtttttg 430  Q
    |||||||||||||||||    
T  20694454 aaaaatatgagtttttg 20694470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 263 - 430
Target Start/End: Original strand, 24210250 - 24210418
Alignment:
Q  263 tacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaa-tgcaattttggtatt 361  Q
    ||||||||||| |||||||||||| ||||||| ||  |||  |||||||||||||||||||||||| |||||||||||| |||| ||| |||||||||||    
T  24210250 tacaacacaaggcagaacaacacatgacaaatattttatggtattgagtaattttttgttttatacgatttttgagggacaaaaatgctattttggtatt 24210349  T
Q  362 ttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||||||| |||||||||||||||||||||| | ||||||||||||| |||| ||||||||||||||    
T  24210350 ttagacaacttgtacgtgggataaaaagttgtgctgtggtttggtgagggacaataatatgagtttttg 24210418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 254 - 430
Target Start/End: Complemental strand, 36743851 - 36743675
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatt 353  Q
    |||||| | ||||||| ||| ||||||| |||| ||||||||||  ||| ||||||||||||| |||||||||||||||||||||||| ||||||| |||    
T  36743851 atagaataatacaacataaggcagaacagcacaagacaaattttttatggcattgagtaatttgttgttttatacaatttttgagggacaaaatgctatt 36743752  T
Q  354 ttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||||||||||||||| |||||||||| ||||||||||| | | ||||||||||| |||||||||||| ||||||    
T  36743751 ttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtagtttggtgagggacaaaaatatgaatttttg 36743675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 273 - 430
Target Start/End: Original strand, 38812462 - 38812619
Alignment:
Q  273 gacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaacta 372  Q
    ||||||||||||||||| || ||||  |||||| |||||||||||||||||||||| ||||||| || | ||||||| |||||||||||||||||||||     
T  38812462 gacagaacaacacaggataatttttttatgacaatgagtaattttttgttttatacgatttttgcggaacaaaatgctattttggtattttagacaactt 38812561  T
Q  373 gtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||||||| ||||||||||| | ||||||||||||| |||||||||||||||||||    
T  38812562 gtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttg 38812619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 219 - 394
Target Start/End: Original strand, 29616063 - 29616233
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaatagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttt 318  Q
    ||||||||||||||||| |||||||| | |||     ||||||||||||||||||||||||||||||| ||||||||||  ||| |||||||||||||||    
T  29616063 gtgtttggtttgcaaaatagcaagtacttgac-----agaacagtacaacacaagacagaacaacacatgacaaattttttatggcattgagtaattttt 29616157  T
Q  319 tgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtg 394  Q
    |||||||||| |||||| ||||| ||||||  ||||||||||||||||||| | |||||||||| |||||||||||    
T  29616158 tgttttatacgatttttaagggacaaaatgttattttggtattttagacaatttgtacgtgggacaaaaagttgtg 29616233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 256 - 430
Target Start/End: Original strand, 21202665 - 21202838
Alignment:
Q  256 agaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatttt 355  Q
    ||||||| ||||||||| |||||||| |||| ||||||||||  ||| || |||||||||||||||||||||| ||||||| |||| ||||||| |||||    
T  21202665 agaacagcacaacacaaaacagaacagcacatgacaaattttttatggcaatgagtaattttttgttttatacgatttttg-gggacaaaatgctatttt 21202763  T
Q  356 ggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    | |||||||||||||| |||||||||| ||||||||||| | ||||||||||||| |||||| ||||||||||||    
T  21202764 gatattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaattatgagtttttg 21202838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 268 - 430
Target Start/End: Complemental strand, 38486406 - 38486244
Alignment:
Q  268 cacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagac 367  Q
    |||||| ||||||| |||||||||||||||  ||| | ||||||||||||||||||||||| |||||||||||| ||||||| |||||| ||||||||||    
T  38486406 cacaaggcagaacagcacaggacaaattttttatggcgttgagtaattttttgttttatactatttttgagggacaaaatgctattttgatattttagac 38486307  T
Q  368 aactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||| ||||||  || ||||||||||| | ||||||||||||| |||||||||||||||||||    
T  38486306 aacttgtacgttagacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttg 38486244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 273 - 430
Target Start/End: Complemental strand, 50728057 - 50727900
Alignment:
Q  273 gacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaacta 372  Q
    ||||||||| ||| |||||||||||  ||| |||||| |||||||||||||||||| |||||||||||| ||||||  |||||||||||||||||||||     
T  50728057 gacagaacagcactggacaaattttttatggcattgaataattttttgttttatacgatttttgagggacaaaatgttattttggtattttagacaactt 50727958  T
Q  373 gtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||||||| ||||||||||| | ||||||| ||||| |||||||||||||||||||    
T  50727957 gtacgtgggacaaaaagttgtgttgtggtttgatgagggacaaaaatatgagtttttg 50727900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 273 - 430
Target Start/End: Complemental strand, 50736071 - 50735914
Alignment:
Q  273 gacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaacta 372  Q
    ||||||||| ||| |||||||||||  ||| |||||| |||||||||||||||||| |||||||||||| ||||||  |||||||||||||||||||||     
T  50736071 gacagaacagcactggacaaattttttatggcattgaataattttttgttttatacgatttttgagggacaaaatgttattttggtattttagacaactt 50735972  T
Q  373 gtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||||||| ||||||||||| | ||||||| ||||| |||||||||||||||||||    
T  50735971 gtacgtgggacaaaaagttgtgttgtggtttgatgagggacaaaaatatgagtttttg 50735914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 264 - 430
Target Start/End: Original strand, 32181197 - 32181362
Alignment:
Q  264 acaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtatttt 363  Q
    |||| |||||| |||||| |||||||||||||| | |||||||||| ||||||| |||||||||| ||||||| ||||  |||||| |||||||||||||    
T  32181197 acaatacaagatagaacagcacaggacaaattt-gtatgacattgaataattttatgttttatactatttttgggggacgaaatgctattttggtatttt 32181295  T
Q  364 agacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||||| |||||||||| ||||||||||  | ||||||||||||| |||||||||||||||||||    
T  32181296 agacaacttgtacgtgggacaaaaagttgtactgtggtttggtgagggacaaaaatatgagtttttg 32181362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 219 - 428
Target Start/End: Complemental strand, 47361602 - 47361402
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaatagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttt 318  Q
    ||||||||||| |||||||  |||||||||||||||     |||||||||||||| ||||||| |||| ||||||||||  |||| ||||||||||||||    
T  47361602 gtgtttggtttacaaaacaataagtattggacagaa-----cagtacaacacaaggcagaacagcacatgacaaattttttatgatattgagtaattttt 47361508  T
Q  319 tgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaa 418  Q
    |||||||||| | |||| ||||| ||||||| |||||||||||||||||||||     || ||| ||||||||||| | ||||||||||||| |||||||    
T  47361507 tgttttatacgaatttttagggacaaaatgctattttggtattttagacaact----tgttggacaaaaagttgtgttgtggtttggtgagggacaaaaa 47361412  T
Q  419 tatgagtttt 428  Q
    ||||| ||||    
T  47361411 tatgaatttt 47361402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 256 - 430
Target Start/End: Original strand, 1231236 - 1231410
Alignment:
Q  256 agaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatttt 355  Q
    ||||||||||||||||||  |||||| |||| || |||||||  ||| ||||  ||||| ||||||||||||| |||||||||||| ||||||  |||||    
T  1231236 agaacagtacaacacaaggtagaacagcacaagataaattttttatggcattatgtaatattttgttttatacgatttttgagggacaaaatgttatttt 1231335  T
Q  356 ggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    | |||||||||||||| |||||||||| ||||||||||| | |||||| |||||| |||||||||||||||||||    
T  1231336 gatattttagacaacttgtacgtgggacaaaaagttgtgctgtggttttgtgagggacaaaaatatgagtttttg 1231410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 261 - 430
Target Start/End: Original strand, 34929845 - 34930014
Alignment:
Q  261 agtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtat 360  Q
    ||||||||||||| ||||||| |||| |||||| |||  ||| |||| ||||| |||||||||||||| ||||||| |||| ||||||| |||||| |||    
T  34929845 agtacaacacaaggcagaacagcacatgacaaaatttttatggcattcagtaaatttttgttttatacgatttttgggggacaaaatgctattttgatat 34929944  T
Q  361 tttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    ||||||||||| |||  ||||  ||||||||||| | |||||||||||||||||||||||||||||||||    
T  34929945 tttagacaacttgtatatggggcaaaaagttgtgctgtggtttggtgaggaacaaaaatatgagtttttg 34930014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 256 - 430
Target Start/End: Complemental strand, 44649322 - 44649151
Alignment:
Q  256 agaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatttt 355  Q
    |||||||||||| |||||  ||||||||||| ||||||||||| |||||||||| |||||||  ||||||||| ||||||| |||| ||||||| |||||    
T  44649322 agaacagtacaatacaagggagaacaacacatgacaaattttg-atgacattgaataatttt--gttttatacgatttttgggggacaaaatgctatttt 44649226  T
Q  356 ggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    | |||||||||||||| |||| ||||| ||||||||||| | ||||||| ||||| |||||||||| ||||||||    
T  44649225 gatattttagacaacttgtacatgggacaaaaagttgtgttgtggtttgctgagggacaaaaatatcagtttttg 44649151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 275 - 429
Target Start/End: Original strand, 4325735 - 4325889
Alignment:
Q  275 cagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagt 374  Q
    |||||||||||| ||||||||||  ||| || |||||||||||||||||||| | ||||||| |||| ||||||| ||||||||||||||||||||| ||    
T  4325735 cagaacaacacacgacaaattttttatggcaatgagtaattttttgttttatgcgatttttgggggacaaaatgctattttggtattttagacaacttgt 4325834  T
Q  375 acgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagttttt 429  Q
    |||||||| ||||||||||| |  ||||| |||||  ||||||||||||||||||    
T  4325835 acgtgggacaaaaagttgtgttgcggttttgtgagagacaaaaatatgagttttt 4325889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 269 - 430
Target Start/End: Complemental strand, 46680658 - 46680497
Alignment:
Q  269 acaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagaca 368  Q
    |||||| ||||||  ||||||||||||||  ||| ||||||||||||||||||||||||  |||||| ||||| ||||||| ||| ||||||||||||||    
T  46680658 acaagatagaacagtacaggacaaattttttatggcattgagtaattttttgttttatatgattttttagggacaaaatgctattatggtattttagaca 46680559  T
Q  369 actagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    | | ||||||| || ||||||||||| | ||||||||| ||| |||||||||||||||||||    
T  46680558 atttgtacgtgagacaaaaagttgtgctgtggtttggtaagggacaaaaatatgagtttttg 46680497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 276 - 429
Target Start/End: Complemental strand, 47642631 - 47642479
Alignment:
Q  276 agaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagta 375  Q
    |||||| ||||||| |||||||  |||||||||| |||||||||||||||||| ||||||| |||| ||||||| |||||| |||||||||||||| |||    
T  47642631 agaacagcacaggataaattttt-atgacattgaataattttttgttttatacgatttttgggggacaaaatgctattttgatattttagacaacttgta 47642533  T
Q  376 cgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagttttt 429  Q
    ||||||| ||||||||||| | ||||||| ||||| |||||||||| |||||||    
T  47642532 cgtgggacaaaaagttgtgttgtggtttgctgagggacaaaaatatcagttttt 47642479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 264 - 429
Target Start/End: Original strand, 50186462 - 50186626
Alignment:
Q  264 acaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtatttt 363  Q
    |||||| |||||| ||||||| ||||||||||||  |||||||||| ||||||||| |||||||| ||||||| ||    |||||| ||||| |||||||    
T  50186462 acaacataagacataacaacataggacaaattttt-atgacattgaataattttttattttatacgatttttggggtgcgaaatgctatttttgtatttt 50186560  T
Q  364 agacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagttttt 429  Q
    |||||||| ||| |||||||||||||||||| | ||||||||||||| ||||||||||||||||||    
T  50186561 agacaacttgtatgtgggataaaaagttgtgttgtggtttggtgagggacaaaaatatgagttttt 50186626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 258 - 430
Target Start/End: Complemental strand, 44324500 - 44324329
Alignment:
Q  258 aacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttgg 357  Q
    ||||| |||||| ||| ||||||| |||| ||||||||||  ||| |||||| |||||||||||||||||| ||||||| ||||  |||||| |||||||    
T  44324500 aacagcacaacataaggcagaacagcacatgacaaattttt-atggcattgaataattttttgttttatacgatttttgggggacgaaatgctattttgg 44324402  T
Q  358 tattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    ||||| | |||||| |||||||||| ||||||||||| | ||||||||||||| |||||||||| ||||||||    
T  44324401 tatttaaaacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatcagtttttg 44324329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 276 - 430
Target Start/End: Complemental strand, 50178633 - 50178479
Alignment:
Q  276 agaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagta 375  Q
    |||||| |||||||||||||||  |||||||||| |||||||||||||||||| ||||||| |||| ||||||| |||||| |||||||||||||| |||    
T  50178633 agaacatcacaggacaaattttt-atgacattgaataattttttgttttatacgatttttgggggacaaaatgctattttgatattttagacaacttgta 50178535  T
Q  376 cgtggga-taaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||||  ||||||||||| | ||||||| ||||| |||||||||| ||||||||    
T  50178534 cgtgggacaaaaaagttgtgctgtggtttgctgaggcacaaaaatatcagtttttg 50178479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 254 - 388
Target Start/End: Original strand, 14296520 - 14296654
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatt 353  Q
    |||||||||||||||||||  ||||||| |||||||||||||||  ||| ||||||||||||||||||||||||| ||||||| | || ||||||  |||    
T  14296520 atagaacagtacaacacaaagcagaacagcacaggacaaattttttatggcattgagtaattttttgttttatacgatttttgggagacaaaatgttatt 14296619  T
Q  354 ttggtattttagacaactagtacgtgggataaaaa 388  Q
    |||||||||||||||||| |||||||||| |||||    
T  14296620 ttggtattttagacaacttgtacgtgggacaaaaa 14296654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 254 - 388
Target Start/End: Original strand, 14314768 - 14314902
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatt 353  Q
    |||||||||||||||||||  ||||||| |||||||||||||||  ||| ||||||||||||||||||||||||| ||||||| | || ||||||  |||    
T  14314768 atagaacagtacaacacaaagcagaacagcacaggacaaattttttatggcattgagtaattttttgttttatacgatttttgggagacaaaatgttatt 14314867  T
Q  354 ttggtattttagacaactagtacgtgggataaaaa 388  Q
    |||||||||||||||||| |||||||||| |||||    
T  14314868 ttggtattttagacaacttgtacgtgggacaaaaa 14314902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 256 - 430
Target Start/End: Original strand, 52949647 - 52949819
Alignment:
Q  256 agaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatttt 355  Q
    ||||||| |||| |||||  |||| | |||||||||||||||  |||||||||| ||||||| |||||||||| ||||||| |||| ||||||| |||||    
T  52949647 agaacagcacaatacaagggagaatagcacaggacaaattttt-atgacattgaataatttt-tgttttatacgatttttgggggacaaaatgctatttt 52949744  T
Q  356 ggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    | |||||||||||||| |||||||||| ||||||||||| | ||||||| ||||| |||||||||| ||||||||    
T  52949745 gatattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttgctgagggacaaaaatatcagtttttg 52949819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 219 - 430
Target Start/End: Original strand, 23327810 - 23328018
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaatagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttt 318  Q
    |||||||||||||||||||| |||||  ||||| ||     ||  |||||||||   ||||||  ||||||||||||||  ||| || ||||||||||||    
T  23327810 gtgtttggtttgcaaaacagtaagtaccggacaaaa-----caacacaacacaaagtagaacattacaggacaaattttttatggcaatgagtaattttt 23327904  T
Q  319 tgttttatacaattttt-gagggagaaaatgcaattttggtattttagacaactagtacgtggga-taaaaagttgtgatatggtttggtgaggaacaaa 416  Q
    |||||||||| |||||| | |||| ||||||  ||||||||||||||||||||| ||||||||||  ||||||||||| | ||||||| ||||| |||||    
T  23327905 tgttttatacgatttttggggggataaaatgttattttggtattttagacaacttgtacgtgggacaaaaaagttgtgttgtggtttgctgagggacaaa 23328004  T
Q  417 aatatgagtttttg 430  Q
    ||||||||||||||    
T  23328005 aatatgagtttttg 23328018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 254 - 430
Target Start/End: Original strand, 9807080 - 9807254
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatt 353  Q
    ||||||||| |||||||||| || |||| |||||||||||||| | ||| |||||| ||||||| |||||||||| |||||||  |||  |||||| |||    
T  9807080 atagaacagcacaacacaaggcataacagcacaggacaaattt-gtatggcattgaataattttatgttttatacgatttttggaggacgaaatgctatt 9807178  T
Q  354 ttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||||||||||||||| |||||| ||| ||||||||||  | ||||||||||||| |||||||  ||||||||||    
T  9807179 ttggtattttagacaacttgtacgtaggacaaaaagttgtactgtggtttggtgagg-acaaaaagttgagtttttg 9807254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 264 - 429
Target Start/End: Complemental strand, 7555109 - 7554945
Alignment:
Q  264 acaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtatttt 363  Q
    |||||||||||||||||| |||| ||||||||||  ||| |||||| |||||||||||||||||| |||||||  ||   |||||| |||||||  ||||    
T  7555109 acaacacaagacagaacatcacacgacaaattttt-atggcattgaataattttttgttttatacgatttttggaggccgaaatgctattttggattttt 7555011  T
Q  364 agacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagttttt 429  Q
    |||||||| ||||||| || ||||||||||| |||||||| |||| | ||||||||| ||||||||    
T  7555010 agacaacttgtacgtgagacaaaaagttgtgttatggtttagtgaaggacaaaaatacgagttttt 7554945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 289 - 430
Target Start/End: Original strand, 42869931 - 42870070
Alignment:
Q  289 acaaattttgcatgacattgagtaattttttgttttatacaatttttgaggga-gaaaatgcaattttggtattttagacaactagtacgtgggataaaa 387  Q
    |||||||||  ||| ||||||||||||||||||||||||| ||||||||||||  ||||||| ||||| |||||||||||||||  ||||||||   | |    
T  42869931 acaaattttttatggcattgagtaattttttgttttatacgatttttgagggacaaaaatgctatttttgtattttagacaacttatacgtggg---aca 42870027  T
Q  388 agttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    ||||||| | ||||||||||||| |||||||||||||||||||    
T  42870028 agttgtgctgtggtttggtgagggacaaaaatatgagtttttg 42870070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 276 - 430
Target Start/End: Complemental strand, 37695681 - 37695528
Alignment:
Q  276 agaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagta 375  Q
    |||||| |||| ||||||||||  ||| |||||| |||||||||||||||||| ||||||| ||||  |||||  |||||| |||||||||||||  |||    
T  37695681 agaacagcacaagacaaattttt-atggcattgaataattttttgttttatacgatttttgggggacgaaatgttattttgatattttagacaacctgta 37695583  T
Q  376 cgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    ||||||| ||||||||||| | ||||||| ||||| |||||||||| ||||||||    
T  37695582 cgtgggacaaaaagttgtgttgtggtttgatgagggacaaaaatatcagtttttg 37695528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 269 - 430
Target Start/End: Original strand, 37931859 - 37932019
Alignment:
Q  269 acaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagaca 368  Q
    ||||| ||||||| |||| ||||| ||||  ||| |||||| |||||||| ||||||||||||||||| ||||  |||||| ||||||  |||||| |||    
T  37931859 acaaggcagaacagcacaagacaacttttt-atggcattgaataatttttcgttttatacaatttttgggggacgaaatgctattttgacattttaaaca 37931957  T
Q  369 actagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    ||| ||| || ||| ||||||||||| | ||||||||||||| |||||||||||||||||||    
T  37931958 acttgtatgtaggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttg 37932019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 305 - 430
Target Start/End: Original strand, 41711821 - 41711946
Alignment:
Q  305 attgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttg 404  Q
    ||||| |||||||||||||||||| || |||| ||||  |||||| ||||||||||||||||||||  ||||||| || ||||||||||  | |||||||    
T  41711821 attgaataattttttgttttatacgatatttgggggacgaaatgctattttggtattttagacaacctgtacgtgagacaaaaagttgtactgtggtttg 41711920  T
Q  405 gtgaggaacaaaaatatgagtttttg 430  Q
    |||||| |||||||||||||| ||||    
T  41711921 gtgagggacaaaaatatgagtctttg 41711946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 256 - 419
Target Start/End: Complemental strand, 22318544 - 22318382
Alignment:
Q  256 agaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatttt 355  Q
    ||||||| ||||||||||||| ||||||||| ||||||||||  |||| ||||| |||||| ||||||||||  |||||||   || ||||||  |||||    
T  22318544 agaacagcacaacacaagacataacaacacatgacaaattttt-atgatattgaataatttcttgttttatatgatttttggatgacaaaatgttatttt 22318446  T
Q  356 ggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaat 419  Q
    ||| ||||||||||||  |||||  || ||||||||||| | ||||||||||||| ||||||||    
T  22318445 ggtgttttagacaacttctacgtaagacaaaaagttgtgttgtggtttggtgagggacaaaaat 22318382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 259 - 430
Target Start/End: Original strand, 29592824 - 29592994
Alignment:
Q  259 acagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggt 358  Q
    |||| |||||||||| |||||||  ||| ||||||||||   || |||||| |||||||||||||||||  ||||||| ||||  |||||| |||||||     
T  29592824 acagaacaacacaaggcagaacagaacaagacaaatttttt-tggcattgaataattttttgttttatatgatttttgggggacgaaatgccattttgga 29592922  T
Q  359 attttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
     ||||||||||||  || |||||| ||||||||||| | |||||| |||| | |||||||||||||||||||    
T  29592923 tttttagacaacttttatgtgggacaaaaagttgtgctgtggtttagtgaagtacaaaaatatgagtttttg 29592994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 256 - 430
Target Start/End: Original strand, 3649562 - 3649735
Alignment:
Q  256 agaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatttt 355  Q
    ||||||| |||||||||| || |||| ||||  |||||||||  |||  ||||| |||||| ||||||||||   |||||| ||||  |||||  |||||    
T  3649562 agaacagcacaacacaaggcataacagcacatcacaaattttt-atggtattgaataatttcttgttttatatgttttttgggggacgaaatgttatttt 3649660  T
Q  356 ggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    ||| |||||||||||| |||||||||| ||||||||||| | ||||||||||||| |||||||| | ||||||||    
T  3649661 ggtgttttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaattttagtttttg 3649735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 351 - 430
Target Start/End: Complemental strand, 2630017 - 2629938
Alignment:
Q  351 attttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    ||||||||||||||||||||| ||||||| || ||||||||||||| |||| |||||||| |||||||||||||||||||    
T  2630017 attttggtattttagacaacttgtacgtgagacaaaaagttgtgatttggtctggtgagggacaaaaatatgagtttttg 2629938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 264 - 430
Target Start/End: Complemental strand, 53200796 - 53200630
Alignment:
Q  264 acaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtatttt 363  Q
    |||||| ||| || |||||||||| |||||||||  |||  ||||| |||||||||||||| ||  ||||||||||||  |||| | |||||| | ||||    
T  53200796 acaacataaggcataacaacacagaacaaattttt-atggtattgaataattttttgttttgtatgatttttgagggacgaaatactattttgatgtttt 53200698  T
Q  364 agacaactagtacgtggga-taaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||||| ||||||||||  ||||||||||| | ||||||||||||| |||||||| | ||||||||    
T  53200697 agacaacttgtacgtgggacaaaaaagttgtgctgtggtttggtgagggacaaaaatttcagtttttg 53200630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 276 - 429
Target Start/End: Original strand, 16320467 - 16320617
Alignment:
Q  276 agaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagta 375  Q
    ||||||||||| ||||||||||  ||| |||||| |||||||  ||||||||| | ||||| ||||  |||| | ||||| ||||||||| ||||  |||    
T  16320467 agaacaacacaagacaaattttt-atggcattgaataatttt--gttttatacgagttttgggggatgaaattctatttttgtattttaggcaacctgta 16320563  T
Q  376 cgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagttttt 429  Q
    ||||||| ||||||||||| | ||||||||||||| |||||||||| |||||||    
T  16320564 cgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatcagttttt 16320617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 265 - 419
Target Start/End: Original strand, 39078596 - 39078749
Alignment:
Q  265 caacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtatttta 364  Q
    ||||||||| || |||||||||||| |||||||  |||  ||||| |||||| || |||||||  ||||||| |||| ||||||  |||||||| |||||    
T  39078596 caacacaaggcataacaacacaggataaattttt-atggtattgaataatttcttattttatatgatttttgggggacaaaatgttattttggtgtttta 39078694  T
Q  365 gacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaat 419  Q
    ||||||| |||||| ||| ||||| ||||| | ||||||||||||| ||||||||    
T  39078695 gacaactcgtacgtaggacaaaaatttgtgttgtggtttggtgagggacaaaaat 39078749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 219 - 334
Target Start/End: Complemental strand, 53343670 - 53343560
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaatagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttt 318  Q
    |||||| |||||||||||| ||||||||| ||||||     |||||||||||||  |||||||||||| ||||||||||  ||| |||||| ||||||||    
T  53343670 gtgttttgtttgcaaaacaacaagtattgaacagaa-----cagtacaacacaatgcagaacaacacatgacaaattttttatggcattgaataattttt 53343576  T
Q  319 tgttttatacaatttt 334  Q
    |||||||||| |||||    
T  53343575 tgttttatacgatttt 53343560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 304 - 430
Target Start/End: Original strand, 2786937 - 2787063
Alignment:
Q  304 cattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggttt 403  Q
    |||||| |||||||||||||||||  ||||||| ||||  |||||  |||||||  ||||||| || | |||||||||| ||||| ||||||| ||||||    
T  2786937 cattgaataattttttgttttataagatttttgggggacgaaatgttattttggatttttagataatttgtacgtgggacaaaaatttgtgatgtggttt 2787036  T
Q  404 ggtgaggaacaaaaatatgagtttttg 430  Q
     |||| | |||||||||||||||||||    
T  2787037 agtgaaggacaaaaatatgagtttttg 2787063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 304 - 430
Target Start/End: Original strand, 11056015 - 11056141
Alignment:
Q  304 cattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggttt 403  Q
    |||||| |||||||||||||||||| |||||||||| |  |||||  ||||||||||||| |||||   |||| ||||| | ||||||||| | ||||||    
T  11056015 cattgaataattttttgttttatacgatttttgaggcacgaaatgttattttggtatttttgacaatctgtacatgggacataaagttgtgttgtggttt 11056114  T
Q  404 ggtgaggaacaaaaatatgagtttttg 430  Q
    ||| ||| |||||||||| ||||||||    
T  11056115 ggtaagggacaaaaatatcagtttttg 11056141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 344 - 421
Target Start/End: Original strand, 28115265 - 28115342
Alignment:
Q  344 aaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatat 421  Q
    |||||| ||||||||||||||||||||| ||| |||||| ||||||||||| | ||||||||||||| ||||||||||    
T  28115265 aaatgctattttggtattttagacaacttgtatgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatat 28115342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 264 - 419
Target Start/End: Original strand, 7001788 - 7001940
Alignment:
Q  264 acaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtatttt 363  Q
    ||||||||||||||||||| ||||||||||||||  ||| |||||| |||||||| || |||||| |||||||  |||  |||||  ||||||||| |||    
T  7001788 acaacacaagacagaacaatacaggacaaatttt-tatggcattgaataatttttggtcttatacgatttttggtgga-caaatgttattttggta-ttt 7001884  T
Q  364 agacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaat 419  Q
    ||||||||  ||| | | | ||||||||||| | ||||||||||||| ||||||||    
T  7001885 agacaacttatacatagaacaaaaagttgtgttgtggtttggtgagggacaaaaat 7001940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 304 - 391
Target Start/End: Original strand, 42772731 - 42772818
Alignment:
Q  304 cattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagtt 391  Q
    ||||||||||||||||||||||||  |||||||  ||| ||||||  |||||||||||||||| ||||  ||||||||| ||||||||    
T  42772731 cattgagtaattttttgttttatatgatttttggaggaaaaaatgttattttggtattttagataacttatacgtgggacaaaaagtt 42772818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 344 - 430
Target Start/End: Complemental strand, 50729615 - 50729529
Alignment:
Q  344 aaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||| ||||||||||||||||||||| ||||||| || ||||||||||| | |||||||||||   |||||||| | ||||||||    
T  50729615 aaatgctattttggtattttagacaacttgtacgtgagacaaaaagttgtgctgtggtttggtgatagacaaaaatttcagtttttg 50729529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 311 - 430
Target Start/End: Original strand, 43739441 - 43739560
Alignment:
Q  311 taattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgagg 410  Q
    |||||||| || |||||||||||||   ||| ||||||  |||||  |||||||||||||| ||| |||||| |||| |||||| | |||||||||||||    
T  43739441 taatttttggtcttatacaattttttgtggataaaatgttattttaatattttagacaacttgtatgtgggacaaaatgttgtgttgtggtttggtgagg 43739540  T
Q  411 aacaaaaatatgagtttttg 430  Q
     |||| ||| | ||||||||    
T  43739541 gacaataatttcagtttttg 43739560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 364 - 430
Target Start/End: Complemental strand, 25978664 - 25978598
Alignment:
Q  364 agacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||||| ||| ||| || ||||||||||||||||||||||||||| |||||||| | ||||||||    
T  25978664 agacaacttgtaagtgagacaaaaagttgtgatatggtttggtgagggacaaaaatttcagtttttg 25978598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 351 - 415
Target Start/End: Complemental strand, 45577758 - 45577694
Alignment:
Q  351 attttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaa 415  Q
    ||||||||||||||||||||| | |||||||| ||||||||||| | |||||| | |||||||||    
T  45577758 attttggtattttagacaacttgcacgtgggacaaaaagttgtgttgtggtttagcgaggaacaa 45577694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 430
Target Start/End: Original strand, 26083272 - 26083438
Alignment:
Q  264 acaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttgg-tattt 362  Q
    |||||||||| || ||||  ||| ||||||||||  |||  ||||| ||||||  |||||||||   |||||| ||||  |||||  ||||||| | |||    
T  26083272 acaacacaaggcataacagtacacgacaaattttt-atggtattgaataatttcatgttttatatgctttttgggggacgaaatgttattttgggtgttt 26083370  T
Q  363 tagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    ||||||||| ||| |||||| |||||||| || | ||||||||||||| |||||||| | ||||||||    
T  26083371 tagacaacttgtaagtgggacaaaaagttatgctgtggtttggtgagggacaaaaatttcagtttttg 26083438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 375 - 430
Target Start/End: Original strand, 42772832 - 42772887
Alignment:
Q  375 acgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||||| ||||||||||| | ||||||||||| | |||||||||||||||||||    
T  42772832 acgtgggacaaaaagttgtgttgtggtttggtgaaggacaaaaatatgagtttttg 42772887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 351 - 408
Target Start/End: Original strand, 3579144 - 3579201
Alignment:
Q  351 attttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtga 408  Q
    ||||||||||||||||||||| | | || ||| |||||||||||||||||||| ||||    
T  3579144 attttggtattttagacaacttgaatgttggacaaaaagttgtgatatggtttagtga 3579201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 315 - 428
Target Start/End: Original strand, 13110311 - 13110425
Alignment:
Q  315 tttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttg-gtgaggaac 413  Q
    |||||||||| ||  ||||||| ||||  |||||| |||||||  |||||||||| |  ||||||||| ||| ||||||| | ||||||  |||| | ||    
T  13110311 tttttgttttgtatgatttttgggggacgaaatgctattttggatttttagacaaattttacgtgggacaaacagttgtgttgtggttttagtgaaggac 13110410  T
Q  414 aaaaatatgagtttt 428  Q
    |||||||||||||||    
T  13110411 aaaaatatgagtttt 13110425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 409
Target Start/End: Original strand, 30942761 - 30942866
Alignment:
Q  304 cattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggttt 403  Q
    |||||| |||||| ||||||||||  ||||||| ||||  |||||  |||||||| ||||||||||||  || ||| |  |||| |||||| | ||||||    
T  30942761 cattgaataatttcttgttttatatgatttttgggggatgaaatgatattttggtgttttagacaacttatatgtgaggcaaaatgttgtgttgtggttt 30942860  T
Q  404 ggtgag 409  Q
    ||||||    
T  30942861 ggtgag 30942866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 416
Target Start/End: Original strand, 38520519 - 38520584
Alignment:
Q  351 attttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaa 416  Q
    |||||||||||||| |||||| || ||||||| ||||| || || | ||||||||||||| |||||    
T  38520519 attttggtattttatacaacttgtgcgtgggacaaaaaattatgctgtggtttggtgagggacaaa 38520584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 377
Target Start/End: Complemental strand, 56487365 - 56487292
Alignment:
Q  304 cattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacg 377  Q
    |||||| | |||||||||||||||  |||||||  ||| ||||||  |||||||||||||| |||||| |||||    
T  56487365 cattgattgattttttgttttatatgatttttggaggacaaaatgttattttggtattttaaacaacttgtacg 56487292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 312 - 428
Target Start/End: Original strand, 52755501 - 52755617
Alignment:
Q  312 aattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgagga 411  Q
    |||||||||||||||||||| ||||| ||| ||||||  |||||| || |||| ||| || || | ||| | ||||||||||  | || ||||||||||     
T  52755501 aattttttgttttatacaatgtttgatggaaaaaatgttattttgctaatttacacagcttgtgcttggaacaaaaagttgttttgtgctttggtgaggg 52755600  T
Q  412 acaaaaatatgagtttt 428  Q
    |||| ||| | ||||||    
T  52755601 acaagaattttagtttt 52755617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 135; Significance: 3e-70; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 219 - 430
Target Start/End: Original strand, 16386738 - 16386959
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattg 308  Q
    ||||||||||||||||||||||||||||||||||||          ||||||||||||| ||||| ||||||| |||||||||||||||  ||| |||||    
T  16386738 gtgtttggtttgcaaaacagcaagtattggacagaacagtacaagatagaacagtacaatacaaggcagaacagcacaggacaaattttttatggcattg 16386837  T
Q  309 agtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtga 408  Q
    |||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||    
T  16386838 agtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgatgtggtttggtga 16386937  T
Q  409 ggaacaaaaatatgagtttttg 430  Q
    || |||||||||||||||||||    
T  16386938 gggacaaaaatatgagtttttg 16386959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 219 - 430
Target Start/End: Complemental strand, 845014 - 844793
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattg 308  Q
    |||||||||||||||||||||||||| |||||||||          ||||||||||||||||||| ||||||| |||||||||||||||  ||| |||||    
T  845014 gtgtttggtttgcaaaacagcaagtactggacagaacagtacaagatagaacagtacaacacaaggcagaacagcacaggacaaattttttatggcattg 844915  T
Q  309 agtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtga 408  Q
    |||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||| |||||||||| ||||||||||| | |||||||||||    
T  844914 agtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtga 844815  T
Q  409 ggaacaaaaatatgagtttttg 430  Q
    || |||||||||||||||||||    
T  844814 gggacaaaaatatgagtttttg 844793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 219 - 430
Target Start/End: Complemental strand, 30105955 - 30105749
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaatagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttt 318  Q
    |||||||||||||||||||||||||| |||||||||     |||||||||||||| ||||||||||| |||||||||||  ||| |||| ||||||||||    
T  30105955 gtgtttggtttgcaaaacagcaagtactggacagaa-----cagtacaacacaaggcagaacaacactggacaaattttttatggcattaagtaattttt 30105861  T
Q  319 tgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaa 418  Q
    |||||||||| |||||||||||| ||||||| ||||||||||||||||||||| |||||||||| |||||||| || | ||||||||||||| |||||||    
T  30105860 tgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttatgctgtggtttggtgagggacaaaaa 30105761  T
Q  419 tatgagtttttg 430  Q
    ||||||||||||    
T  30105760 tatgagtttttg 30105749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 219 - 430
Target Start/End: Complemental strand, 26118490 - 26118284
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaatagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttt 318  Q
    |||||||||||||||||||||||||| |||||||||     |||||||||||||| ||||||| |||||||||||||||  ||| |||||| ||||||||    
T  26118490 gtgtttggtttgcaaaacagcaagtactggacagaa-----cagtacaacacaaggcagaacagcacaggacaaattttttatggcattgaataattttt 26118396  T
Q  319 tgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaa 418  Q
    |||||||||| |||||||||||| ||||||| |||||||||||||||||||||  ||||||||| ||||||||||| | || |||||||||| |||||||    
T  26118395 tgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttttacgtgggacaaaaagttgtgctgtgatttggtgagggacaaaaa 26118296  T
Q  419 tatgagtttttg 430  Q
    ||||||||||||    
T  26118295 tatgagtttttg 26118284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 254 - 430
Target Start/End: Complemental strand, 45491120 - 45490944
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatt 353  Q
    |||||||| ||||||||||| ||||||| |||| ||||||||||| ||| ||||||||||||||||||||||||| |||||||||||| ||||||| |||    
T  45491120 atagaacaatacaacacaaggcagaacagcacatgacaaattttgtatggcattgagtaattttttgttttatacgatttttgagggacaaaatgctatt 45491021  T
Q  354 ttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||||||||||||||| |||||||||| ||||||||||| | ||||||||||||| |||||||||||||||||||    
T  45491020 ttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttg 45490944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 253 - 430
Target Start/End: Complemental strand, 6711292 - 6711115
Alignment:
Q  253 aatagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaat 352  Q
    ||||||||||||||||||||| ||||||| |||| ||||||||||  ||| ||||||||||||||||||||||||| |||||||||||| ||||||| ||    
T  6711292 aatagaacagtacaacacaaggcagaacagcacaagacaaattttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgctat 6711193  T
Q  353 tttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    ||||||||||||||||||| |||||||||| ||||| ||||| | ||||||||||||| |||||||||||||||||||    
T  6711192 tttggtattttagacaacttgtacgtgggacaaaaaattgtgttgtggtttggtgagggacaaaaatatgagtttttg 6711115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 254 - 430
Target Start/End: Original strand, 42510454 - 42510630
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatt 353  Q
    |||||||||||||||||||| ||||||| |||||||||||||||  ||| |||||| |||||||||||||||||| |||||||||||| ||||||| |||    
T  42510454 atagaacagtacaacacaaggcagaacagcacaggacaaattttttatggcattgaataattttttgttttatacgatttttgagggacaaaatgctatt 42510553  T
Q  354 ttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||||||||||||||| |||||||||| ||||||||||| | ||||||||||||  |||||||||||||||||||    
T  42510554 ttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagagacaaaaatatgagtttttg 42510630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 219 - 430
Target Start/End: Original strand, 51264379 - 51264600
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattg 308  Q
    |||||||||||||||| |||||||||||||||||||          ||||||||||||||||||||||||| | |||||||||||||||  ||| |||||    
T  51264379 gtgtttggtttgcaaatcagcaagtattggacagaacagtacaagatagaacagtacaacacaagacagaatagcacaggacaaattttttatggcattg 51264478  T
Q  309 agtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtga 408  Q
    |||||||||||||||||||| |||||| | ||| ||||||| ||||| |||||||| |||||| |||||||||| ||||||||||| | |||||||||||    
T  51264479 agtaattttttgttttatacgatttttaaaggacaaaatgctattttagtattttaaacaacttgtacgtgggacaaaaagttgtgttgtggtttggtga 51264578  T
Q  409 ggaacaaaaatatgagtttttg 430  Q
    || |||||||||||||||||||    
T  51264579 gggacaaaaatatgagtttttg 51264600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 220 - 430
Target Start/End: Complemental strand, 35387600 - 35387380
Alignment:
Q  220 tgtttggtttgcaaaacagcaagtattggacagaata----------gaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattga 309  Q
    ||||||||||||||||||||||||| |||||| ||||          |||||||||||||||||  |||||| |||| ||||||||||  ||| ||||||    
T  35387600 tgtttggtttgcaaaacagcaagtactggacataataatacaagatagaacagtacaacacaaggtagaacagcacatgacaaattttttatggcattga 35387501  T
Q  310 gtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgag 409  Q
    ||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||| |||||||| | ||||||||||| | ||||||||||||    
T  35387500 gtaattttttgttttatacgatttttgagggataaaatgctattttggtattttagacaacttgtacgtggaacaaaaagttgtgctgtggtttggtgag 35387401  T
Q  410 gaacaaaaatatgagtttttg 430  Q
    | |||||||||||||||||||    
T  35387400 ggacaaaaatatgagtttttg 35387380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 254 - 430
Target Start/End: Original strand, 12890167 - 12890343
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatt 353  Q
    |||||||||||||||||||| ||||||| ||||||| |||||||  ||| ||||||||||||||||||||||||| |||||||||||| ||||||| |||    
T  12890167 atagaacagtacaacacaaggcagaacagcacaggataaattttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgctatt 12890266  T
Q  354 ttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    ||||||| |||||||||| |||||||||| ||||||||||| | ||||||| ||||| |||||||||||||||||||    
T  12890267 ttggtatcttagacaacttgtacgtgggacaaaaagttgtgctgtggtttgatgagggacaaaaatatgagtttttg 12890343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 219 - 430
Target Start/End: Original strand, 7183802 - 7184023
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattg 308  Q
    |||||||||||||||||||| ||||| |||||||||          |||||||||||||||||||||||||||| ||||||||||||||  ||| |||||    
T  7183802 gtgtttggtttgcaaaacagtaagtactggacagaacagtacaagatagaacagtacaacacaagacagaacaatacaggacaaattttttatggcattg 7183901  T
Q  309 agtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtga 408  Q
    |||||||||||||||||||| ||||||||| || ||||| | || |||||||||||||||||| |||||| ||| ||||||||||| | ||||||||| |    
T  7183902 agtaattttttgttttatacgatttttgagagacaaaatactatattggtattttagacaacttgtacgtaggacaaaaagttgtgttgtggtttggtaa 7184001  T
Q  409 ggaacaaaaatatgagtttttg 430  Q
    || |||||||||||||||||||    
T  7184002 gggacaaaaatatgagtttttg 7184023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 254 - 430
Target Start/End: Complemental strand, 1351679 - 1351504
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatt 353  Q
    |||||||||||||||||||| |||||||||||| ||||||||||  ||| ||||||||| ||||||||||||||  ||||||||| || ||||||| |||    
T  1351679 atagaacagtacaacacaaggcagaacaacacatgacaaattttttatggcattgagta-ttttttgttttatatgatttttgagagacaaaatgctatt 1351581  T
Q  354 ttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||||||||||||||| |||||||||| ||||||||||| | ||||||||||||| |||||||||||||||||||    
T  1351580 ttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttg 1351504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 219 - 430
Target Start/End: Original strand, 16451011 - 16451232
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattg 308  Q
    |||||||||||||||||||| ||||| |||||||||          ||||| ||||||||||| | ||||| | |||||||||||||||  ||| |||||    
T  16451011 gtgtttggtttgcaaaacagtaagtactggacagaacagtacaagatagaatagtacaacacatggcagaatagcacaggacaaattttttatggcattg 16451110  T
Q  309 agtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtga 408  Q
    |||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||| ||| |||||| ||||||||||| | |||||||||||    
T  16451111 agtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtatgtgggacaaaaagttgtgttgtggtttggtga 16451210  T
Q  409 ggaacaaaaatatgagtttttg 430  Q
    |  |||||||||||||||||||    
T  16451211 gagacaaaaatatgagtttttg 16451232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 219 - 430
Target Start/End: Complemental strand, 28340593 - 28340372
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattg 308  Q
    ||||||||||| |||||||| |||||||||||||||          ||||||||||||||||||| |||||||  ||| ||||| ||||  ||| |||||    
T  28340593 gtgtttggtttacaaaacagtaagtattggacagaacagtacaagatagaacagtacaacacaaggcagaacagtacatgacaatttttttatggcattg 28340494  T
Q  309 agtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtga 408  Q
    |||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||| ||||||| || ||||||||||| | ||||||| |||    
T  28340493 agtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgagacaaaaagttgtgctgtggtttgatga 28340394  T
Q  409 ggaacaaaaatatgagtttttg 430  Q
    || |||||||||||||||||||    
T  28340393 gggacaaaaatatgagtttttg 28340372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 219 - 430
Target Start/End: Original strand, 41972796 - 41973016
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattg 308  Q
    |||||||||||||||||||||||||| |||||||||          ||||||||||||||||||| ||||||| |||| ||||||||||  ||| ||||     
T  41972796 gtgtttggtttgcaaaacagcaagtactggacagaacagtacaagatagaacagtacaacacaaggcagaacagcacatgacaaattttttatggcatta 41972895  T
Q  309 agtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtga 408  Q
    |||||||||||||||||||| ||||| |||||| ||||||  ||||||||||||||||||||| ||||||| || ||||||||||  | |||||||||||    
T  41972896 agtaattttttgttttatacgatttt-gagggacaaaatgttattttggtattttagacaacttgtacgtgagacaaaaagttgtagtgtggtttggtga 41972994  T
Q  409 ggaacaaaaatatgagtttttg 430  Q
    || |||||||||||||||||||    
T  41972995 gggacaaaaatatgagtttttg 41973016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 219 - 428
Target Start/End: Complemental strand, 44738331 - 44738113
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattg 308  Q
    |||||||||||||||||||||||||| | |||||||          ||||||| |||||||||||  ||||||||||| ||||||||||  ||| |||||    
T  44738331 gtgtttggtttgcaaaacagcaagtactagacagaacagtagaagatagaacaatacaacacaaggtagaacaacacatgacaaattttttatggcattg 44738232  T
Q  309 agtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtga 408  Q
    |||||||||||||||||||| |||||||||| | ||||  | |||||| |||||||||||||| |||||||||| ||||||||||||| |||||||||||    
T  44738231 agtaattttttgttttatacgatttttgaggaataaaaa-ctattttgctattttagacaacttgtacgtgggacaaaaagttgtgatgtggtttggtga 44738133  T
Q  409 ggaacaaaaatatgagtttt 428  Q
    || |||||||||||||||||    
T  44738132 gggacaaaaatatgagtttt 44738113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 219 - 430
Target Start/End: Original strand, 32270242 - 32270458
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattg 308  Q
    |||||||||||||||||||||||||| |||||| ||          ||||||||||||||||||||||||| |     |||||||||||  ||| |||||    
T  32270242 gtgtttggtttgcaaaacagcaagtactggacaaaacagtacaagatagaacagtacaacacaagacagaata-----ggacaaattttttatggcattg 32270336  T
Q  309 agtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtga 408  Q
    |||||||||||||||||||  |||||||||||| ||||||| |||||| |||||||||||||| |||| ||||| ||||||||||| | |||||||||||    
T  32270337 agtaattttttgttttatatgatttttgagggacaaaatgctattttgatattttagacaacttgtacatgggacaaaaagttgtgctgtggtttggtga 32270436  T
Q  409 ggaacaaaaatatgagtttttg 430  Q
    || |||||||||||||||||||    
T  32270437 gggacaaaaatatgagtttttg 32270458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 254 - 430
Target Start/End: Original strand, 17887876 - 17888053
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgaggg-agaaaatgcaat 352  Q
    |||||||| ||||||||||| |||||||||||| ||||||||||  ||| ||||||||||||| ||||||||||| ||||||| ||| | ||||||  ||    
T  17887876 atagaacaatacaacacaaggcagaacaacacatgacaaattttttatggcattgagtaatttgttgttttatacgatttttggggggacaaaatgttat 17887975  T
Q  353 tttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    ||||||||||||||||||| |||||||||| ||||||||||| | |||||||| |||| |||||||||||||||||||    
T  17887976 tttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggcgagggacaaaaatatgagtttttg 17888053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 254 - 430
Target Start/End: Complemental strand, 24339882 - 24339707
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatt 353  Q
    |||||||||||||||||||| ||||||| |||||||||||||||  ||| |||||| |||||||||||||||||| || |||  ||| || ||||| |||    
T  24339882 atagaacagtacaacacaaggcagaacagcacaggacaaattttttatggcattgaataattttttgttttatacgatgttt--gggggacaatgctatt 24339785  T
Q  354 ttggtattttagacaactagtacgtgggataaaaagttgtgatatgg-tttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||||||||||||||| |||||||||| ||||||||||| | ||| |||||||||| |||||||||||||||||||    
T  24339784 ttggtattttagacaacttgtacgtgggaaaaaaagttgtgttgtggttttggtgagggacaaaaatatgagtttttg 24339707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 254 - 427
Target Start/End: Original strand, 50540273 - 50540446
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatt 353  Q
    |||||||||||||||||| | ||||||| |||||| ||||||||  ||| ||||||||||||| ||||||||||  ||||||| |||| ||||||| |||    
T  50540273 atagaacagtacaacacacgtcagaacagcacagggcaaattttttatggcattgagtaatttgttgttttatatgatttttgggggacaaaatgctatt 50540372  T
Q  354 ttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagttt 427  Q
    |||||||||||||||||| |||||||||| ||||||||||| | ||||||| ||| | ||||||||||||||||    
T  50540373 ttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttgatgaaggacaaaaatatgagttt 50540446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 254 - 430
Target Start/End: Complemental strand, 32289589 - 32289413
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatt 353  Q
    |||||| |||| |||| ||| |||||||||| |||| |||| ||  |||||||||| ||||||| ||||||||| ||||||||||||| ||||||| |||    
T  32289589 atagaagagtataacataagccagaacaacataggataaatattttatgacattgaataattttatgttttatataatttttgagggacaaaatgctatt 32289490  T
Q  354 ttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    ||||||||||| |||||| |||||||| | ||||||||||| | ||||||||||||| |||||||||||||||||||    
T  32289489 ttggtattttaaacaacttgtacgtggaacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttg 32289413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 219 - 430
Target Start/End: Original strand, 16437262 - 16437467
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaatagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttt 318  Q
    |||||||||||| |||||||||| || |||||||||     ||||| || | |  |||| |||  ||||||||||||||  ||| |||||||||||||||    
T  16437262 gtgtttggtttgtaaaacagcaaatactggacagaa-----cagtataagatagaacagtacagtacaggacaaattttt-atggcattgagtaattttt 16437355  T
Q  319 tgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaa 418  Q
    |||||||||| |||||||| ||| ||||||| |||||| |||||||||||||| |||||||||| ||||||||||| | ||||||||||||| |||||||    
T  16437356 tgttttatacgatttttgaaggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaa 16437455  T
Q  419 tatgagtttttg 430  Q
    ||||||||||||    
T  16437456 tatgagtttttg 16437467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 264 - 430
Target Start/End: Complemental strand, 41968084 - 41967918
Alignment:
Q  264 acaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtatttt 363  Q
    |||||||||| | |||||| ||| ||||||||||  |||||| |||||||||||||||||||||||||||||| | || |||| || |||||||||||||    
T  41968084 acaacacaaggcggaacaatacatgacaaattttttatgacaatgagtaattttttgttttatacaatttttgggagacaaaaggctattttggtatttt 41967985  T
Q  364 agacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||||| ||||||| || ||||||||||| | ||||||||| ||| |||||||||||||||||||    
T  41967984 agacaacttgtacgtgagacaaaaagttgtgttgtggtttggtaagggacaaaaatatgagtttttg 41967918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 229 - 382
Target Start/End: Complemental strand, 20495156 - 20495008
Alignment:
Q  229 tgcaaaacagcaagtattggacagaatagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatac 328  Q
    |||||||||| ||||||||||     ||||||||||||||| ||| ||||||| |||| ||||||||||  |||||||||||||||||||||||||||||    
T  20495156 tgcaaaacagaaagtattgga-----tagaacagtacaacataaggcagaacagcacatgacaaattttttatgacattgagtaattttttgttttatac 20495062  T
Q  329 aatttttgagggagaaaatgcaattttggtattttagacaactagtacgtggga 382  Q
     |||||||||||| ||||||| ||||||||||||||||||||| ||||||||||    
T  20495061 tatttttgagggacaaaatgctattttggtattttagacaacttgtacgtggga 20495008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 276 - 420
Target Start/End: Original strand, 38663084 - 38663227
Alignment:
Q  276 agaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagta 375  Q
    ||||||||||||||||||||||  |||||||||| |||||||||||||||||| |||||||||||| ||||||  |||||| |||||||||||||| |||    
T  38663084 agaacaacacaggacaaattttt-atgacattgaataattttttgttttatacgatttttgagggacaaaatgttattttgatattttagacaacttgta 38663182  T
Q  376 cgtgggataaaaagttgtgatatggtttggtgaggaacaaaaata 420  Q
    ||||||| ||||||||||| | ||||||| ||||| |||||||||    
T  38663183 cgtgggacaaaaagttgtgctgtggtttgctgagggacaaaaata 38663227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 264 - 419
Target Start/End: Original strand, 1601112 - 1601267
Alignment:
Q  264 acaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtatttt 363  Q
    |||||||||| |||||||||||| ||||||||||  ||| || |||||||||||||||||| ||| |||||||  ||| ||||||| |||||||||||||    
T  1601112 acaacacaaggcagaacaacacaagacaaattttttatggcaatgagtaattttttgttttgtacgatttttggtggacaaaatgctattttggtatttt 1601211  T
Q  364 agacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaat 419  Q
    |||||||| ||| |||||| ||||||||||| | ||||||||||||| ||||||||    
T  1601212 agacaacttgtatgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 1601267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 278 - 429
Target Start/End: Complemental strand, 16476375 - 16476225
Alignment:
Q  278 aacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacg 377  Q
    |||| |||| ||||||||| | ||| |||||| ||||||| |||||||||||||||||| |||| ||||||| ||||||||||||||||||||| |||||    
T  16476375 aacaccacatgacaaattt-gtatggcattgaataattttatgttttatacaatttttgggggacaaaatgctattttggtattttagacaacttgtacg 16476277  T
Q  378 tgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagttttt 429  Q
    ||||| |||||||||||   ||||||||||||| ||||||||||||||||||    
T  16476276 tgggacaaaaagttgtgccgtggtttggtgagggacaaaaatatgagttttt 16476225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 219 - 430
Target Start/End: Complemental strand, 51703452 - 51703233
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaatag----------aacagtacaacacaagacagaacaacacaggacaaattttgcatgacattg 308  Q
    |||||||||||||||||||||||||| |||||| || ||          ||||| |||||||||| || ||||| ||| ||||||||||  ||| |||||    
T  51703452 gtgtttggtttgcaaaacagcaagtactggacaaaacagtacaagatataacagaacaacacaaggcaaaacaatacatgacaaattttttatggcattg 51703353  T
Q  309 agtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtga 408  Q
    |||||||||||||||||||| | |||||||||| ||||||  ||||| ||||||||||||||  ||| |||||| ||||||||||| | ||| |||||||    
T  51703352 agtaattttttgttttatacca-ttttgagggacaaaatgttatttttgtattttagacaacatgtaggtgggacaaaaagttgtgttgtgg-ttggtga 51703255  T
Q  409 ggaacaaaaatatgagtttttg 430  Q
    ||||||||||||||||||||||    
T  51703254 ggaacaaaaatatgagtttttg 51703233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 254 - 430
Target Start/End: Complemental strand, 3415099 - 3414922
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaatttttt-gttttatacaatttttgagggagaaaatgcaat 352  Q
    |||||||| || ||||||||||| ||||||||| |  |  ||||  ||| |||||||||||||||| ||||||||  ||||||| |||| ||||||| ||    
T  3415099 atagaacaatataacacaagacaaaacaacacatgtaattttttttatggcattgagtaatttttttgttttatatgatttttgggggacaaaatgctat 3415000  T
Q  353 tttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||||||||| ||||||||||||||||||||||| || |||| | ||||||||||| |||||||||||||||||||    
T  3414999 tttggtattttaaacaactagtacgtgggataaaaaattatgatgtagtttggtgagggacaaaaatatgagtttttg 3414922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 254 - 430
Target Start/End: Complemental strand, 17327894 - 17327718
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatt 353  Q
    |||||||||||||| ||||| |||||||||| ||||||||||||  ||| | ||||||||||| ||||||||||| ||||||| |||| |||||   |||    
T  17327894 atagaacagtacaatacaaggcagaacaacataggacaaattttttatggcgttgagtaatttgttgttttatacgatttttgggggacaaaatattatt 17327795  T
Q  354 ttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    ||||||||||||| || | |||| || || ||||||||||| | || |||||||||| |||||||||||||||||||    
T  17327794 ttggtattttagataatttgtacatgagacaaaaagttgtgctgtgatttggtgagggacaaaaatatgagtttttg 17327718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 219 - 430
Target Start/End: Original strand, 39281779 - 39281999
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaatag----------aacagtacaacacaagacagaacaacacaggacaaattttgcatgacattg 308  Q
    |||||||||||||||||||| ||||| ||||||||||||          ||||| |||||||||  || ||||||||| ||||| ||| | |||||||||    
T  39281779 gtgtttggtttgcaaaacagtaagtactggacagaatagtataagatagaacagcacaacacaatgcataacaacacatgacaacttt-gtatgacattg 39281877  T
Q  309 agtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtga 408  Q
    | ||||||| |||||||||| |||||||  |||  |||||  ||||||||||||||||||||| |||||| ||| ||||||||||  | |||||||||||    
T  39281878 aataattttatgttttatacgatttttggaggacgaaatgttattttggtattttagacaacttgtacgtaggacaaaaagttgtactgtggtttggtga 39281977  T
Q  409 ggaacaaaaatatgagtttttg 430  Q
    || |||||||||||||||||||    
T  39281978 gggacaaaaatatgagtttttg 39281999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 258 - 430
Target Start/End: Original strand, 25539789 - 25539960
Alignment:
Q  258 aacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttgg 357  Q
    |||| ||||||||||| ||||| | |||||||||||||||  ||| | |||| |||||||||||||||||| ||||||| ||||  |||||| |||||||    
T  25539789 aacaatacaacacaaggcagaatagcacaggacaaattttt-atggctttgaataattttttgttttatacgatttttgggggacgaaatgctattttgg 25539887  T
Q  358 tattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    ||||| | |||||| ||| |||||| ||||||||||| | ||||||||||||| |||||||||| ||||||||    
T  25539888 tatttaaaacaacttgtaggtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatcagtttttg 25539960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 264 - 430
Target Start/End: Complemental strand, 13994309 - 13994144
Alignment:
Q  264 acaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtatttt 363  Q
    |||| ||||| |||||||||||| ||||||||||| |||| ||||| ||||||| |||||||||  ||||||| ||||  |||||| |||||||||||||    
T  13994309 acaatacaaggcagaacaacacaagacaaattttgtatgatattgaataattttatgttttatatgatttttg-gggacgaaatgctattttggtatttt 13994211  T
Q  364 agacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||||| |||| || || ||||||||||| | ||||||||||||| |||||||| | ||||||||    
T  13994210 agacaacttgtacatgagacaaaaagttgtgttgtggtttggtgagggacaaaaatttcagtttttg 13994144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 276 - 430
Target Start/End: Original strand, 31004084 - 31004237
Alignment:
Q  276 agaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagta 375  Q
    |||||| |||||||||||||||  ||| |||||| |||||||||||||||||  ||||||| ||||  |||| | ||||||||||||||||||||| |||    
T  31004084 agaacatcacaggacaaattttt-atggcattgaataattttttgttttataggatttttgggggacgaaatactattttggtattttagacaacttgta 31004182  T
Q  376 cgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    ||||||| ||||||||||| | ||||||||||||| ||||||| || ||||||||    
T  31004183 cgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaacatcagtttttg 31004237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 256 - 430
Target Start/End: Complemental strand, 38087238 - 38087065
Alignment:
Q  256 agaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatttt 355  Q
    |||||||||||||| ||| ||||||| |||||||||||||||  ||| |||||| |||| ||||| ||||| ||||||||| || |  |||||| |||||    
T  38087238 agaacagtacaacataaggcagaacagcacaggacaaattttt-atggcattgaataatattttgctttatgcaatttttggggaacgaaatgctatttt 38087140  T
Q  356 ggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    ||  |||||||||||| |||| ||||| ||||||||||||| |||||| |||| | |||||||||||||||||||    
T  38087139 ggatttttagacaacttgtacttgggacaaaaagttgtgatgtggtttagtgaaggacaaaaatatgagtttttg 38087065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 256 - 430
Target Start/End: Complemental strand, 42513012 - 42512839
Alignment:
Q  256 agaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatttt 355  Q
    ||||||| |||| |||||  |||||| |||||||||||||||  || ||||||| |||||||||||||||||| ||||||| |||| ||||| | |||||    
T  42513012 agaacagcacaatacaagggagaacagcacaggacaaattttt-atcacattgaataattttttgttttatacgatttttgggggacaaaattctatttt 42512914  T
Q  356 ggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    | |||||||||||| | |||||| ||| ||||||||||| | ||||||| ||||| |||||||||| ||||||||    
T  42512913 gatattttagacaatttgtacgtaggacaaaaagttgtgttgtggtttgctgaggcacaaaaatatcagtttttg 42512839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 254 - 430
Target Start/End: Original strand, 46154829 - 46155012
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatt 353  Q
    ||||||||||| ||||||||||| |||  |||| ||||||||||  |||||||||| |||||||||||||||||  |||||||| ||| ||||||  |||    
T  46154829 atagaacagtataacacaagacataacggcacatgacaaattttttatgacattgaataattttttgttttataagatttttgaaggacaaaatgttatt 46154928  T
Q  354 ttggtattttagacaactagtacgtgggataaaaagttgtg-------atatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||||||||||||||| ||| |||||| |||||||||||        | | ||||||||||| |||||||||||||||||||    
T  46154929 ttggtattttagacaacttgtaagtgggacaaaaagttgtgctgtagtttgtagtttggtgagggacaaaaatatgagtttttg 46155012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 256 - 430
Target Start/End: Original strand, 50304583 - 50304756
Alignment:
Q  256 agaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatttt 355  Q
    ||||||| |||| |||||  |||||| |||||||||||||||  |||||||||| |||||||||||||||||| |||||||  ||| ||||||| |||||    
T  50304583 agaacagcacaatacaagggagaacagcacaggacaaattttt-atgacattgaataattttttgttttatacgatttttggaggacaaaatgctatttt 50304681  T
Q  356 ggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    | ||||||||||||||   ||||| || ||||||||||| | |||||||  |||| |||||||||| ||||||||    
T  50304682 gatattttagacaacttaaacgtgagacaaaaagttgtgctgtggtttgcagagggacaaaaatatcagtttttg 50304756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 304 - 429
Target Start/End: Complemental strand, 49303548 - 49303424
Alignment:
Q  304 cattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggttt 403  Q
    ||||||||||||||||||||||||| ||||||| |||| ||||||  ||||| ||||||||||||||| |||||| ||||||||| ||||| | ||||||    
T  49303548 cattgagtaattttttgttttatacgatttttg-gggacaaaatgttattttagtattttagacaacttgtacgtaggataaaaaattgtgctgtggttt 49303450  T
Q  404 ggtgaggaacaaaaatatgagttttt 429  Q
    ||||| | ||||||||||||||||||    
T  49303449 ggtgaaggacaaaaatatgagttttt 49303424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 289 - 429
Target Start/End: Complemental strand, 42705448 - 42705308
Alignment:
Q  289 acaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaa 388  Q
    |||||||||  ||| || |||||||||||||||||||||  ||||||| |||| ||||||| ||||||  |||| |||||||| ||||||||||  ||||    
T  42705448 acaaattttttatggcaatgagtaattttttgttttatatgatttttgggggacaaaatgctattttgacatttcagacaacttgtacgtgggacgaaaa 42705349  T
Q  389 gttgtgatatggtttggtgaggaacaaaaatatgagttttt 429  Q
    |||||| | ||||||||||||| ||||||||||||||||||    
T  42705348 gttgtgttgtggtttggtgagggacaaaaatatgagttttt 42705308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 258 - 430
Target Start/End: Original strand, 45658755 - 45658926
Alignment:
Q  258 aacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttgg 357  Q
    ||||| |||||||||||||||| | |||| ||||||||||  ||| | |||| |||||||||||||||||  ||||||| ||||  |||||| |||||||    
T  45658755 aacagcacaacacaagacagaatagcacatgacaaattttt-atggctttgaataattttttgttttatatgatttttgggggacgaaatgctattttgg 45658853  T
Q  358 tattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    ||||| | |||||| ||| |||||| ||||||||||| | ||||||||||||  |||||||||| ||||||||    
T  45658854 tatttaaaacaacttgtaggtgggacaaaaagttgtgttgtggtttggtgagcgacaaaaatatcagtttttg 45658926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 256 - 430
Target Start/End: Complemental strand, 6029543 - 6029370
Alignment:
Q  256 agaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatttt 355  Q
    ||||||| |||||||||| || |||| |||||||||||||||  |||  ||||| |||||| ||||||||||   |||||| ||||  |||||  |||||    
T  6029543 agaacagcacaacacaaggcataacagcacaggacaaattttt-atggtattgaataatttcttgttttatatgctttttgggggacgaaatgttatttt 6029445  T
Q  356 ggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    ||| |||||||||||| |||||||||| ||||||||||| | ||||||||||||| |||||||| | ||||||||    
T  6029444 ggtgttttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatttcagtttttg 6029370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 269 - 429
Target Start/End: Complemental strand, 25343438 - 25343279
Alignment:
Q  269 acaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagaca 368  Q
    |||||||||||||||||| ||||||||||  |||||||||| |||||||||| ||||| | ||||||||||||  |||| | |||||||  |||| ||||    
T  25343438 acaagacagaacaacacaagacaaattttt-atgacattgaataattttttgctttatgcgatttttgagggacgaaatactattttggatttttggaca 25343340  T
Q  369 actagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagttttt 429  Q
    ||| ||||||| || ||||||||||  |||||||| |||| | ||||||||||| ||||||    
T  25343339 acttgtacgtgcgacaaaaagttgtactatggtttagtgaaggacaaaaatatgtgttttt 25343279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 219 - 411
Target Start/End: Original strand, 34663826 - 34664013
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaatagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttt 318  Q
    |||||||||||||||||||| ||||| |||||||||     |||||||||| |||  |||| | |||| ||||||||||  ||| |||| ||||||||||    
T  34663826 gtgtttggtttgcaaaacagtaagtactggacagaa-----cagtacaacataaggtagaagagcacatgacaaattttttatggcattaagtaattttt 34663920  T
Q  319 tgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgagga 411  Q
    |||||||||  ||||||||| || ||||||  |||||| |||||||||||| |  || |||||  ||||||||||| | ||||||||||||||    
T  34663921 tgttttatatgatttttgagtgacaaaatgttattttgatattttagacaatttataagtgggtcaaaaagttgtgttgtggtttggtgagga 34664013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 264 - 430
Target Start/End: Complemental strand, 11772866 - 11772701
Alignment:
Q  264 acaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtatttt 363  Q
    |||||||||| ||||| | |||||||||||||||  |||   |||| | |||||||||||||||| ||||||| ||||  |||| | ||||||||||||     
T  11772866 acaacacaaggcagaatagcacaggacaaattttt-atggttttgaattattttttgttttatacgatttttgggggacgaaatactattttggtattta 11772768  T
Q  364 agacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    | |||| | ||| |||||| ||||||||||| | ||||||||||||| |||||||||| ||||||||    
T  11772767 aaacaatttgtaggtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatcagtttttg 11772701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 305 - 430
Target Start/End: Complemental strand, 50382597 - 50382472
Alignment:
Q  305 attgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttg 404  Q
    ||||| |||| ||||||||||||  |||||||||||| ||||||  ||||| || |||||||||||| |||||||||| ||||||||||| | |||||||    
T  50382597 attgaataatattttgttttatatgatttttgagggacaaaatgttatttttgtgttttagacaacttgtacgtgggacaaaaagttgtgttgtggtttg 50382498  T
Q  405 gtgaggaacaaaaatatgagtttttg 430  Q
    |||| | |||||||| | ||||||||    
T  50382497 gtgaaggacaaaaatttcagtttttg 50382472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 314 - 430
Target Start/End: Original strand, 5109718 - 5109833
Alignment:
Q  314 ttttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaac 413  Q
    |||||| |||||||||||||||| |||| ||||||  ||||||  ||||||||||||| |||| | ||| ||||||||||||| ||||||||||||| ||    
T  5109718 tttttttttttatacaatttttgggggacaaaatgttattttgc-attttagacaacttgtactttggacaaaaagttgtgatgtggtttggtgagggac 5109816  T
Q  414 aaaaatatgagtttttg 430  Q
    ||||| |||||||||||    
T  5109817 aaaaacatgagtttttg 5109833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 254 - 430
Target Start/End: Complemental strand, 26765034 - 26764864
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatt 353  Q
    ||||||||  |||||||||| |||||||| | ||||||||||||  ||  ||||||   |||||||  | ||||| ||||||||||||  ||||   |||    
T  26765034 atagaacaacacaacacaaggcagaacaatataggacaaattttt-atagcattga---atttttt--tatatacgatttttgagggacgaaatattatt 26764941  T
Q  354 ttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||||||||||||||| |||||||||| ||||||||||| | ||||| ||||||| |||||||||| ||||||||    
T  26764940 ttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggttcggtgagggacaaaaatataagtttttg 26764864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 312 - 430
Target Start/End: Original strand, 16704713 - 16704831
Alignment:
Q  312 aattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgagga 411  Q
    ||||||||||||||||| |||||||  ||| |||| || ||||||||||||||||||||| ||| ||| || ||| ||||||||| ||||||||| |||     
T  16704713 aattttttgttttatacgatttttggaggacaaaaagctattttggtattttagacaacttgtatgtgagacaaagagttgtgatgtggtttggtaaggg 16704812  T
Q  412 acaaaaatatgagtttttg 430  Q
    ||||||||||  |||||||    
T  16704813 acaaaaatatatgtttttg 16704831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 256 - 408
Target Start/End: Complemental strand, 15540132 - 15539981
Alignment:
Q  256 agaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatttt 355  Q
    ||||||| |||||||||| || ||||||||| ||||| ||||  |||  ||||| |||||||||||||||||  ||||||| |||| ||||||  |||||    
T  15540132 agaacagcacaacacaaggcataacaacacatgacaagttttt-atggtattgaataattttttgttttatatgatttttgggggacaaaatgttatttt 15540034  T
Q  356 ggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtga 408  Q
    ||| ||||||||||||  |||||  || ||||||||||| | |||||||||||    
T  15540033 ggtgttttagacaacttctacgtatgacaaaaagttgtgctgtggtttggtga 15539981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 257 - 430
Target Start/End: Original strand, 10384300 - 10384472
Alignment:
Q  257 gaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttg 356  Q
    |||||| |||||||| | || |||||||| |||||| ||||   || |||||| |||||||||||||||||  ||||||| ||||  |||||  ||||||    
T  10384300 gaacagcacaacacagggcaaaacaacactggacaattttttattg-cattgaataattttttgttttataagatttttgggggacgaaatgttattttg 10384398  T
Q  357 gtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
       ||||||| || | |||||||||| ||||||||||| | |||||| |||| | |||||||||||||||||||    
T  10384399 aatttttagataatttgtacgtgggacaaaaagttgtgctgtggtttagtgaaggacaaaaatatgagtttttg 10384472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 351 - 410
Target Start/End: Complemental strand, 46815877 - 46815818
Alignment:
Q  351 attttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgagg 410  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||    
T  46815877 attttggtattttagacaactagtacgtgggaaaaaaggttgtgatatggtttagtgagg 46815818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 264 - 419
Target Start/End: Complemental strand, 6144220 - 6144066
Alignment:
Q  264 acaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtatttt 363  Q
    |||||| ||| ||||||| |||| ||||||||||  |||  ||||| ||||||| |||||||||  ||||||| | || ||||||  ||||| || ||||    
T  6144220 acaacataaggcagaacatcacaagacaaattttt-atggtattgaataattttctgttttatatgatttttgggtgacaaaatgttatttttgtgtttt 6144122  T
Q  364 agacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaat 419  Q
    ||||||||  ||||||||| ||||||||||| | |||||||  |||| ||||||||    
T  6144121 agacaacttctacgtgggagaaaaagttgtgttgtggtttgccgagggacaaaaat 6144066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 375 - 430
Target Start/End: Complemental strand, 23799661 - 23799606
Alignment:
Q  375 acgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    ||||| |||||||||||||| | ||||||||||||| |||||||||| ||||||||    
T  23799661 acgtgcgataaaaagttgtgctgtggtttggtgagggacaaaaatatcagtttttg 23799606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 314 - 419
Target Start/End: Original strand, 570375 - 570482
Alignment:
Q  314 ttttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtg--atatggtttggtgagga 411  Q
    |||||| | ||||||||||||||  ||| ||||||  |||||| ||||||||||||||  |||| | || |||||||||||   | |||||||||||||     
T  570375 ttttttatcttatacaatttttggtggaaaaaatgttattttgatattttagacaacttatacgcgagacaaaaagttgtgcattgtggtttggtgaggg 570474  T
Q  412 acaaaaat 419  Q
    ||||||||    
T  570475 acaaaaat 570482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 264 - 328
Target Start/End: Original strand, 21071664 - 21071727
Alignment:
Q  264 acaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatac 328  Q
    |||||||||| |||||||| ||| ||||||||||  || ||||||| ||||||||||||||||||    
T  21071664 acaacacaaggcagaacaatacatgacaaattttt-attacattgaataattttttgttttatac 21071727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 351 - 430
Target Start/End: Original strand, 26733581 - 26733660
Alignment:
Q  351 attttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    ||||||||||||||||||||| |||| || |  ||||||||||| |||||||| ||| || |||| ||| | ||||||||    
T  26733581 attttggtattttagacaacttgtacatgaggcaaaaagttgtgttatggtttagtgggggacaagaatttcagtttttg 26733660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 353 - 430
Target Start/End: Complemental strand, 504537 - 504460
Alignment:
Q  353 tttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||||||||||||||||  || |||||| ||||| ||||| |||||||| |||||  |||||| | | ||||||||    
T  504537 tttggtattttagacaacttctatgtgggacaaaaaattgtgttatggtttagtgagagacaaaattttcagtttttg 504460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 351 - 415
Target Start/End: Complemental strand, 21763251 - 21763187
Alignment:
Q  351 attttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaa 415  Q
    ||||||||||||||||||| | |||  | || |||||||||||||| | ||||||||||| ||||    
T  21763251 attttggtattttagacaattcgtattttggctaaaaagttgtgatgtagtttggtgagggacaa 21763187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 132; Significance: 2e-68; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 219 - 430
Target Start/End: Complemental strand, 14005259 - 14005053
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaatagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttt 318  Q
    |||||||||||||||||||||||||| |||||||||     ||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||||    
T  14005259 gtgtttggtttgcaaaacagcaagtactggacagaa-----cagtacaacacaagacagaacaacataggacaaattttttatgacattgagtaattttt 14005165  T
Q  319 tgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaa 418  Q
    ||||||||||||||||| | ||| ||||||  ||||||||||||||||||||| |||||||||| ||||||||||| | ||||||||||| | |||||||    
T  14005164 tgttttatacaattttttatggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgatggacaaaaa 14005065  T
Q  419 tatgagtttttg 430  Q
    ||||||||||||    
T  14005064 tatgagtttttg 14005053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 254 - 430
Target Start/End: Complemental strand, 29672508 - 29672332
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatt 353  Q
    |||||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| |||||||||||| ||||||| |||    
T  29672508 atagaacagtgcaacacaagacagaacaacacaggacaaatttttcatggcattgagtaattttttgttttatacgatttttgagggacaaaatgctatt 29672409  T
Q  354 ttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    ||||||||||||| |||| |||||||||| ||||||||||| | ||||||||||||| |||||||||||||||||||    
T  29672408 ttggtattttagataacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttg 29672332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 219 - 429
Target Start/End: Original strand, 45446330 - 45446550
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattg 308  Q
    |||||||||||||||||||| ||||| |||||||||          ||||||||||||||||||| ||||||| |||| ||||||||||  ||| |||||    
T  45446330 gtgtttggtttgcaaaacagtaagtactggacagaacagtacaagatagaacagtacaacacaaggcagaacagcacatgacaaattttttatggcattg 45446429  T
Q  309 agtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtga 408  Q
    |||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||| |||||||||| ||||||||||| | |||||||||||    
T  45446430 agtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtga 45446529  T
Q  409 ggaacaaaaatatgagttttt 429  Q
    |||||||||||||||||||||    
T  45446530 ggaacaaaaatatgagttttt 45446550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 219 - 430
Target Start/End: Original strand, 4052372 - 4052576
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaatagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttt 318  Q
    |||||||||||||||||||||||||| |||||||||     |||||||||||||| ||||||| |||||||||||||||  ||| ||||||||||||||     
T  4052372 gtgtttggtttgcaaaacagcaagtactggacagaa-----cagtacaacacaaggcagaacagcacaggacaaattttttatggcattgagtaatttt- 4052465  T
Q  319 tgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaa 418  Q
     ||||||||| |||||||||||| ||||||| ||||||||||||||||||||| |||||||||| ||||||||||| | ||||||||||||| |||||||    
T  4052466 -gttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaa 4052564  T
Q  419 tatgagtttttg 430  Q
    ||||||||||||    
T  4052565 tatgagtttttg 4052576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 219 - 430
Target Start/End: Complemental strand, 29563456 - 29563235
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattg 308  Q
    ||||||||||||||||||||||||||||| ||||||          |||||||||||||||||||  ||||||||||| ||||||||||  ||| |||||    
T  29563456 gtgtttggtttgcaaaacagcaagtattgaacagaacagtacaagatagaacagtacaacacaaggtagaacaacacatgacaaattttttatggcattg 29563357  T
Q  309 agtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtga 408  Q
    |||||||||||||||||||| |||||||||||| ||||| | ||||||||||||||||||||| |||||||||| ||||||||||| | |||||||||||    
T  29563356 agtaattttttgttttatacgatttttgagggacaaaatactattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtga 29563257  T
Q  409 ggaacaaaaatatgagtttttg 430  Q
    || |||||||||||||||||||    
T  29563256 gggacaaaaatatgagtttttg 29563235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 219 - 430
Target Start/End: Complemental strand, 32303815 - 32303594
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattg 308  Q
    |||||||||||||||||||||||||| |||||||||          ||||||||||||||| ||| ||||||| |||||||||||||||  ||| |||||    
T  32303815 gtgtttggtttgcaaaacagcaagtactggacagaacagtacaagatagaacagtacaacaaaaggcagaacagcacaggacaaattttttatggcattg 32303716  T
Q  309 agtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtga 408  Q
    |||||||||||||||||||  |||||||||||| ||||||| ||||||||||||||||||||| |||||||||| ||||||||||| | |||||||||||    
T  32303715 agtaattttttgttttatatgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtga 32303616  T
Q  409 ggaacaaaaatatgagtttttg 430  Q
    || |||||||||||||||||||    
T  32303615 gggacaaaaatatgagtttttg 32303594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 219 - 430
Target Start/End: Complemental strand, 37664498 - 37664292
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaatagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttt 318  Q
    |||||||||||||||||||||||| | |||||||||     |||||||||||||  ||||||| |||| ||||||||||  ||| |||||||||||||||    
T  37664498 gtgtttggtttgcaaaacagcaagcactggacagaa-----cagtacaacacaatgcagaacagcacaagacaaattttttatggcattgagtaattttt 37664404  T
Q  319 tgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaa 418  Q
    |||||||||  ||||||||| || ||||||| ||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||| |||||||    
T  37664403 tgttttatatgatttttgagcgacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaa 37664304  T
Q  419 tatgagtttttg 430  Q
    ||||||||||||    
T  37664303 tatgagtttttg 37664292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 219 - 430
Target Start/End: Complemental strand, 3251886 - 3251665
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattg 308  Q
    |||||||||||||||||||| |||||| ||||||||          ||||||||||||||||||| ||||||| || ||||||||||||  ||| |||||    
T  3251886 gtgtttggtttgcaaaacagtaagtatcggacagaacaatataagatagaacagtacaacacaaggcagaacagcataggacaaattttttatggcattg 3251787  T
Q  309 agtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtga 408  Q
    |||||||||||||||||||| |||||||||||| ||||||  ||||||||||||||||||||| |||||| ||||||||||||||||| |||||||||||    
T  3251786 agtaattttttgttttatacgatttttgagggacaaaatgttattttggtattttagacaacttgtacgtaggataaaaagttgtgatgtggtttggtga 3251687  T
Q  409 ggaacaaaaatatgagtttttg 430  Q
    || |||||||||| ||||||||    
T  3251686 gggacaaaaatataagtttttg 3251665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 254 - 430
Target Start/End: Complemental strand, 5969049 - 5968873
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatt 353  Q
    |||||||||||||||||||| |||||||||| ||||||||||||  ||| ||||||||||||||||||||||||| |||||||||||| ||||||  |||    
T  5969049 atagaacagtacaacacaaggcagaacaacataggacaaattttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgttatt 5968950  T
Q  354 ttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||||||||||||| | |||||||||||||||||||||| | ||||||||||| | |||||||||||||||||||    
T  5968949 ttggtattttagacaatttgtacgtgggataaaaagttgtgctgtggtttggtgaaggacaaaaatatgagtttttg 5968873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 219 - 430
Target Start/End: Complemental strand, 30543237 - 30543031
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaatagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttt 318  Q
    ||||||||||||||||| || |||||||||||||||     |||||||||||||| |||||||||||||||||||| ||  ||| ||||||||||||||     
T  30543237 gtgtttggtttgcaaaatagtaagtattggacagaa-----cagtacaacacaaggcagaacaacacaggacaaatattttatggcattgagtaatttta 30543143  T
Q  319 tgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaa 418  Q
    |||||||||| ||||||| |||| ||||||  ||||||||||||||||||||| ||||||||||  |||||||||| | ||||||||||||| |||||||    
T  30543142 tgttttatacgatttttgggggacaaaatgttattttggtattttagacaacttgtacgtgggacgaaaagttgtgttgtggtttggtgagggacaaaaa 30543043  T
Q  419 tatgagtttttg 430  Q
    ||||||||||||    
T  30543042 tatgagtttttg 30543031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 219 - 430
Target Start/End: Original strand, 6386451 - 6386672
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattg 308  Q
    ||||||||||||||||||| |||||| |||||||||          ||||||||||||||||||| ||||||| ||||  |||||||||  ||| |||||    
T  6386451 gtgtttggtttgcaaaacaacaagtactggacagaacagtacaagatagaacagtacaacacaaggcagaacagcacaaaacaaattttttatggcattg 6386550  T
Q  309 agtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtga 408  Q
    |||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||| ||||||| || ||||||||||| | |||||||||||    
T  6386551 agtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgagacaaaaagttgtgttgtggtttggtga 6386650  T
Q  409 ggaacaaaaatatgagtttttg 430  Q
    || |||||||||||||||||||    
T  6386651 gggacaaaaatatgagtttttg 6386672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 219 - 430
Target Start/End: Complemental strand, 8673285 - 8673064
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattg 308  Q
    |||||||||||||||||||||||||| |||||| ||          ||||||||||||||||||| || |||| ||||||||||| |||  ||| |||||    
T  8673285 gtgtttggtttgcaaaacagcaagtactggacaaaacagtacaagatagaacagtacaacacaaggcaaaacagcacaggacaaaatttttatggcattg 8673186  T
Q  309 agtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtga 408  Q
    |||||||||||||||||||  |||||||||||| ||||||| ||||||||||||||||||||| |||||||||| ||||||||||| | |||||||||||    
T  8673185 agtaattttttgttttatatgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtga 8673086  T
Q  409 ggaacaaaaatatgagtttttg 430  Q
    || |||||||||||||||||||    
T  8673085 gggacaaaaatatgagtttttg 8673064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 219 - 430
Target Start/End: Complemental strand, 31513813 - 31513592
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattg 308  Q
    |||||||||||||||||||| |||||||||||| ||          ||||||||||||||||||| |||||||||||| ||||||||||  ||| |||||    
T  31513813 gtgtttggtttgcaaaacagtaagtattggacaaaacagtacaagatagaacagtacaacacaaggcagaacaacacatgacaaattttttatggcattg 31513714  T
Q  309 agtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtga 408  Q
    |||||||||||||||||||| |||||||| ||| ||||||| ||||||||||||||||||||| |||| | ||| ||||||||||| | |||||||||||    
T  31513713 agtaattttttgttttatacgatttttgaaggacaaaatgctattttggtattttagacaacttgtacctaggacaaaaagttgtgctgtggtttggtga 31513614  T
Q  409 ggaacaaaaatatgagtttttg 430  Q
    || |||||||||||||||||||    
T  31513613 gggacaaaaatatgagtttttg 31513592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 219 - 430
Target Start/End: Complemental strand, 32020231 - 32020010
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattg 308  Q
    |||||||||||||||||||||||||| |||||||||          ||||||||||||||||||| ||||||| |||| ||||||||||  ||| |||||    
T  32020231 gtgtttggtttgcaaaacagcaagtactggacagaacagtacaagatagaacagtacaacacaaggcagaacagcacatgacaaattttttatggcattg 32020132  T
Q  309 agtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtga 408  Q
    |||||||||||||||||||| |||||||||||| ||||| | ||||||||||||||||||||| |||||||| | ||||||||||| | |||||||||||    
T  32020131 agtaattttttgttttatacgatttttgagggacaaaatactattttggtattttagacaacttgtacgtggaacaaaaagttgtgctgtggtttggtga 32020032  T
Q  409 ggaacaaaaatatgagtttttg 430  Q
    || | |||||||||||||||||    
T  32020031 gggataaaaatatgagtttttg 32020010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 219 - 430
Target Start/End: Original strand, 41709652 - 41709873
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattg 308  Q
    |||||||||||||||||||| ||||| |||||||||          ||||||||||||||||||| ||||||| |||||||||| ||||  ||| |||||    
T  41709652 gtgtttggtttgcaaaacagtaagtactggacagaacaatacaagatagaacagtacaacacaaggcagaacagcacaggacaatttttttatggcattg 41709751  T
Q  309 agtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtga 408  Q
    |||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||| |||| |||||| ||| ||||||||||| | |||||||||||    
T  41709752 agtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagataacttgtacgttggacaaaaagttgtgctgtggtttggtga 41709851  T
Q  409 ggaacaaaaatatgagtttttg 430  Q
    || |||||||||||||||||||    
T  41709852 gggacaaaaatatgagtttttg 41709873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 254 - 430
Target Start/End: Original strand, 34101428 - 34101604
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatt 353  Q
    |||||||||||||||||||| ||||||| |||||||||||||||  ||| | ||||||||||||||||||||||| |||||||||||| ||||||| |||    
T  34101428 atagaacagtacaacacaaggcagaacatcacaggacaaattttttatggcgttgagtaattttttgttttatacgatttttgagggacaaaatgctatt 34101527  T
Q  354 ttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||||||||||||||| |||||||| | |||||||| || | ||||||||||||| |||||||||||||||||||    
T  34101528 ttggtattttagacaacttgtacgtggaaaaaaaagttatgttgtggtttggtgagggacaaaaatatgagtttttg 34101604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 215 - 430
Target Start/End: Complemental strand, 12753558 - 12753334
Alignment:
Q  215 ttacgtgtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgac 304  Q
    |||||||||||||||||||||||| |||||||||||||||          ||||||| |||||||||||||||||||||||| ||||||  ||  ||| |    
T  12753558 ttacgtgtttggtttgcaaaacag-aagtattggacagaacagtacaagatagaacaatacaacacaagacagaacaacacatgacaaaaattttatggc 12753460  T
Q  305 attgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttg 404  Q
    |||||||||||| ||||||||||| ||||||| |||| ||||||  ||||||||||||||||||||| ||| |||||| ||||||||||| | |||||||    
T  12753459 attgagtaatttgttgttttatacgatttttgggggacaaaatgttattttggtattttagacaacttgtatgtgggacaaaaagttgtgttgtggtttg 12753360  T
Q  405 gtgaggaacaaaaatatgagtttttg 430  Q
    ||||||||||||||||||||||||||    
T  12753359 gtgaggaacaaaaatatgagtttttg 12753334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 219 - 430
Target Start/End: Original strand, 34063003 - 34063224
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattg 308  Q
    |||||||||||||||||| ||||||| |||||||||          ||||||||||||||| ||| ||| |||||||| ||||||||||  ||| |||||    
T  34063003 gtgtttggtttgcaaaaccgcaagtactggacagaacagtacaagatagaacagtacaacataaggcagcacaacacatgacaaattttttatggcattg 34063102  T
Q  309 agtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtga 408  Q
    | |||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||| |||||||||| ||||||||||| | |||||||| ||    
T  34063103 aataattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggcga 34063202  T
Q  409 ggaacaaaaatatgagtttttg 430  Q
    || |||||||||||||||||||    
T  34063203 gggacaaaaatatgagtttttg 34063224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 219 - 430
Target Start/End: Original strand, 31731939 - 31732160
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattg 308  Q
    |||||||||||||||||||| ||||| |||||||||          ||||||||||||||||||||||||| | |||| |||||| |||  ||| |||||    
T  31731939 gtgtttggtttgcaaaacagtaagtactggacagaaaagtataagatagaacagtacaacacaagacagaatagcacatgacaaaatttttatggcattg 31732038  T
Q  309 agtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtga 408  Q
    |||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||| ||| ||| || ||||||||||  | |||||||||||    
T  31732039 agtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtatgtgagacaaaaagttgtactgtggtttggtga 31732138  T
Q  409 ggaacaaaaatatgagtttttg 430  Q
    || |||||||||||||||||||    
T  31732139 gggacaaaaatatgagtttttg 31732160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 254 - 430
Target Start/End: Complemental strand, 7394999 - 7394823
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatt 353  Q
    |||||||||||||||||||||||||||| || ||||||| ||||  ||| || |||||||||||||||||||| | |||||||| ||| ||||||  |||    
T  7394999 atagaacagtacaacacaagacagaacagcataggacaagttttttatggcactgagtaattttttgttttatgcgatttttgaaggacaaaatgttatt 7394900  T
Q  354 ttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||||||||||||||| ||||||| || ||||||||||| ||||||||||||||| |||||||||||||||||||    
T  7394899 ttggtattttagacaacttgtacgtgagacaaaaagttgtgttatggtttggtgagggacaaaaatatgagtttttg 7394823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 254 - 430
Target Start/End: Original strand, 27103879 - 27104055
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatt 353  Q
    |||||||| ||||||||||| ||||||| |||| ||||||||||  ||| ||||||||||||||||||||||||  |||||||||||| ||||||| |||    
T  27103879 atagaacattacaacacaaggcagaacagcacatgacaaattttttatggcattgagtaattttttgttttatatgatttttgagggacaaaatgctatt 27103978  T
Q  354 ttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    ||| |||||||||||||| |||||||||| |||||||||||   ||||||||||||| |||||||||||||||||||    
T  27103979 ttgatattttagacaacttgtacgtgggacaaaaagttgtgcagtggtttggtgagggacaaaaatatgagtttttg 27104055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 254 - 430
Target Start/End: Complemental strand, 13407120 - 13406944
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatt 353  Q
    |||||||||||||||||||| |||||||||||| ||||||||||  ||  ||||||||||||||||||||||||| ||||||| || | ||||||| |||    
T  13407120 atagaacagtacaacacaaggcagaacaacacatgacaaattttttatagcattgagtaattttttgttttatacgatttttggggcacaaaatgctatt 13407021  T
Q  354 ttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||||||||||||||| ||||||| || ||||| || || | ||||||||||||| |||||||||||||||||||    
T  13407020 ttggtattttagacaacttgtacgtgagacaaaaaattatgctgtggtttggtgagggacaaaaatatgagtttttg 13406944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 221 - 430
Target Start/End: Complemental strand, 7591664 - 7591456
Alignment:
Q  221 gtttggtttgcaaaacagcaagtattggacagaatagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttg 320  Q
    ||||||||||||||||||||||||  | |||  | |||||||||||| |||||  |||||| |||||||||||||||  |||||||||| ||||||||||    
T  7591664 gtttggtttgcaaaacagcaagtacagtacaagaaagaacagtacaatacaagggagaacagcacaggacaaattttt-atgacattgaataattttttg 7591566  T
Q  321 ttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaata 420  Q
    |||||||| ||||||| |||| ||||||| |||||| ||||||||||||||  |||||| || ||||||||||| | ||||||| ||||| |||||||||    
T  7591565 ttttatacgatttttgggggacaaaatgctattttgatattttagacaacttatacgtgtgacaaaaagttgtgttgtggtttgctgaggcacaaaaata 7591466  T
Q  421 tgagtttttg 430  Q
    | ||||||||    
T  7591465 tcagtttttg 7591456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 221 - 430
Target Start/End: Original strand, 10466952 - 10467160
Alignment:
Q  221 gtttggtttgcaaaacagcaagtattggacagaatagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttg 320  Q
    ||||||||||||||||||||||||    |||| | ||||||  |||| |||||  |||||| |||||||||||||||  ||||||| || ||||||||||    
T  10466952 gtttggtttgcaaaacagcaagtacaatacaggaaagaacaacacaatacaagggagaacagcacaggacaaattttt-atgacatagaataattttttg 10467050  T
Q  321 ttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaata 420  Q
    |||||||| ||||||| |||| ||||||| |||||| |||||||||||||| |||||||||| ||||||||||| | ||||||| |||||||||||||||    
T  10467051 ttttatacgatttttgggggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttgctgaggaacaaaaata 10467150  T
Q  421 tgagtttttg 430  Q
    | ||||||||    
T  10467151 tcagtttttg 10467160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 219 - 430
Target Start/End: Original strand, 41548504 - 41548714
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaatagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttt 318  Q
    |||||||||||| |||||||||||||  | |||  | ||||||  |||| |||||  |||||| |||||||||||||||  |||||||||| ||||||||    
T  41548504 gtgtttggtttgtaaaacagcaagtacagtacaagaaagaacaacacaatacaagggagaacatcacaggacaaattttt-atgacattgaataattttt 41548602  T
Q  319 tgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaa 418  Q
    |||||||||| ||||||| |||| ||||||  |||||| |||||||||||||| |||||||||| ||||||||||| | |||| || ||||| |||||||    
T  41548603 tgttttatacgatttttgggggacaaaatgttattttgatattttagacaacttgtacgtgggacaaaaagttgtgttgtggtctgctgaggtacaaaaa 41548702  T
Q  419 tatgagtttttg 430  Q
    ||| ||||||||    
T  41548703 tatcagtttttg 41548714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 264 - 430
Target Start/End: Original strand, 17805620 - 17805787
Alignment:
Q  264 acaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgag-ggagaaaatgcaattttggtattt 362  Q
    ||||||||||  ||||||||||||||||||||||  | | ||  ||||||||||||||||||||| ||||||| | ||| ||||||  ||||||||||||    
T  17805620 acaacacaaggtagaacaacacaggacaaattttttagggcaacgagtaattttttgttttatacgatttttgggaggacaaaatgttattttggtattt 17805719  T
Q  363 tagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    ||||||||| ||||||| || ||| ||||||| | |||||||||||||||||||||||||||||||||    
T  17805720 tagacaacttgtacgtgagacaaagagttgtgctttggtttggtgaggaacaaaaatatgagtttttg 17805787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 254 - 429
Target Start/End: Original strand, 25478168 - 25478338
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatt 353  Q
    |||||||| ||||||||||| |||||||     |||||||||||  ||| ||||||||||||||||||||||||| |||||| ||||| ||||| | |||    
T  25478168 atagaacaatacaacacaaggcagaaca-----ggacaaattttttatggcattgagtaattttttgttttatacgattttttagggacaaaatactatt 25478262  T
Q  354 ttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagttttt 429  Q
    |||||||||||||||||| |||||| ||| ||||||||||| | || |||| ||||| ||||||||||||||||||    
T  25478263 ttggtattttagacaacttgtacgtaggacaaaaagttgtgctgtgatttgatgagggacaaaaatatgagttttt 25478338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 271 - 429
Target Start/End: Original strand, 39642821 - 39642978
Alignment:
Q  271 aagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaac 370  Q
    |||| |||||| |||| ||||||||||  |||||||||| |||||||||||||||||||||||||| ||||  |||||| ||||||||||||||||||||    
T  39642821 aagagagaacatcacaagacaaattttt-atgacattgaataattttttgttttatacaatttttgggggatgaaatgctattttggtattttagacaac 39642919  T
Q  371 tagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagttttt 429  Q
      |||||||||| | ||||||||| | ||||||||||||| |||||||||| |||||||    
T  39642920 ctgtacgtgggacagaaagttgtgttgtggtttggtgagggacaaaaatatcagttttt 39642978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 258 - 430
Target Start/End: Complemental strand, 37618572 - 37618401
Alignment:
Q  258 aacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttgg 357  Q
    ||||| |||||||||| ||||||| |||| ||||||| ||  ||| |||||| |||||||||||||||||||||||||| ||||  |||||| |||||||    
T  37618572 aacagcacaacacaaggcagaacagcacatgacaaatgttt-atggcattgaataattttttgttttatacaatttttgggggacgaaatgctattttgg 37618474  T
Q  358 tattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    ||||| | |||||| ||||||| || ||||||||||| | ||||||||||||| |||||||||| ||||||||    
T  37618473 tatttaaaacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacaaaaatatcagtttttg 37618401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 256 - 430
Target Start/End: Original strand, 15001389 - 15001562
Alignment:
Q  256 agaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatttt 355  Q
    ||||||| |||||||||| |||||||||||| || |||||||  |||  ||||| ||||||| |||||||||  ||||||| |||| ||| ||| |||||    
T  15001389 agaacagcacaacacaaggcagaacaacacaagataaattttttatggtattgaataattttctgttttatatgatttttgggggacaaa-tgctatttt 15001487  T
Q  356 ggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    ||||||||||| |||| |||||||||| ||||||||||| | ||||||||||||| |||||||| | ||||||||    
T  15001488 ggtattttagataacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatttcagtttttg 15001562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 254 - 430
Target Start/End: Original strand, 45113976 - 45114151
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatt 353  Q
    ||||| ||| |||||||||| || ||||||||| || |||||| | |||||||||| ||||||| |||||||||| |||||||  |||  |||||| |||    
T  45113976 atagagcagcacaacacaaggcataacaacacatgataaattt-gtatgacattgaataattttatgttttatacgatttttggaggacgaaatgctatt 45114074  T
Q  354 ttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||||||||||||||| |||| |  || ||||||||||  | ||||||||||||| |||||||||||||||||||    
T  45114075 ttggtattttagacaacttgtacctatgacaaaaagttgtactgtggtttggtgagggacaaaaatatgagtttttg 45114151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 256 - 430
Target Start/End: Original strand, 22999180 - 22999354
Alignment:
Q  256 agaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatttt 355  Q
    ||||||| |||| |||||  |||||| ||||| |||||||||  |||||||||| |||||||||||||||||| |||||||  ||| ||||||| |||||    
T  22999180 agaacagcacaatacaagggagaacagcacagaacaaattttt-atgacattgaataattttttgttttatacgatttttggaggacaaaatgctatttt 22999278  T
Q  356 ggtattttagacaactagtacgtggga-taaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    | |||||||||||| | ||||||||||  |||||||| || ||||||||| ||||| |||||||||| ||||||||    
T  22999279 gatattttagacaagttgtacgtgggacaaaaaagttttgctatggtttgctgagggacaaaaatatcagtttttg 22999354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 264 - 430
Target Start/End: Original strand, 30501076 - 30501241
Alignment:
Q  264 acaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtatttt 363  Q
    |||||| |||||| |||| || ||||||||||||  |||||||||| |||||||||||||||||| ||||||| ||    |||||  ||||| |||||||    
T  30501076 acaacataagacaaaacaccataggacaaattttt-atgacattgaataattttttgttttatacgatttttggggctcgaaatgttatttttgtatttt 30501174  T
Q  364 agacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    || ||||| |||||||||| ||||||||||| | ||||||||||||| ||||||||||| |||||||    
T  30501175 aggcaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgtgtttttg 30501241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 258 - 430
Target Start/End: Original strand, 40388965 - 40389136
Alignment:
Q  258 aacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttgg 357  Q
    ||||| |||||||||| ||||||||||||||| ||| |||  ||| |||||| ||||||||| |||||||| ||||||| ||||  |||||| |||||||    
T  40388965 aacagcacaacacaaggcagaacaacacaggaaaaaatttt-atggcattgaataattttttattttatacgatttttgggggacgaaatgctattttgg 40389063  T
Q  358 tattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
     |||| | |||||| ||| |||||| ||||||||||| | ||||||||||||  | |||||||| ||||||||    
T  40389064 catttaaaacaacttgtatgtgggacaaaaagttgtgctgtggtttggtgagagataaaaatatcagtttttg 40389136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 264 - 430
Target Start/End: Complemental strand, 29611229 - 29611064
Alignment:
Q  264 acaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtatttt 363  Q
    |||||||||| || ||||||||||||||||||||  |||  ||||| |||||| ||||||||||   |||||| ||||  |||||| |||||||| ||||    
T  29611229 acaacacaaggcataacaacacaggacaaattttt-atggtattgaataatttcttgttttatatgctttttgggggacgaaatgctattttggtgtttt 29611131  T
Q  364 agacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    ||||||||  ||||||||| ||||||||||| | |||||||| |||| |||||||| | ||||||||    
T  29611130 agacaacttttacgtgggacaaaaagttgtgttgtggtttggcgagggacaaaaatttcagtttttg 29611064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 330 - 430
Target Start/End: Original strand, 21272680 - 21272780
Alignment:
Q  330 atttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagttttt 429  Q
    |||||| | ||| ||||||| ||||| ||||||||||||||| |||||||||| ||||||||||| | ||||||||||||| ||||||||||||||||||    
T  21272680 atttttaaaggacaaaatgctattttagtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagttttt 21272779  T
Q  430 g 430  Q
    |    
T  21272780 g 21272780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 264 - 419
Target Start/End: Original strand, 35225593 - 35225747
Alignment:
Q  264 acaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtatttt 363  Q
    ||||||||||||||||||||||| ||||||||||  |||  ||||| ||||||  |||||||||  ||||||| | ||  |||||| ||||| |||||||    
T  35225593 acaacacaagacagaacaacacaagacaaattttt-atggtattgaataatttcctgttttatatgatttttgggtgacgaaatgctatttttgtatttt 35225691  T
Q  364 agacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaat 419  Q
    |||||||| |||| || || ||||||||||||| |||||||| |||| ||||||||    
T  35225692 agacaacttgtacttgtgacaaaaagttgtgatgtggtttggcgagggacaaaaat 35225747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 343 - 430
Target Start/End: Original strand, 37861868 - 37861955
Alignment:
Q  343 aaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    ||||||| ||||||||||||||||||||| |||||| ||| ||| |||| |||| ||||||||||||| | |||||||||||||||||    
T  37861868 aaaatgctattttggtattttagacaacttgtacgtaggacaaatagttatgatgtggtttggtgagggataaaaatatgagtttttg 37861955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 314 - 421
Target Start/End: Complemental strand, 27109666 - 27109559
Alignment:
Q  314 ttttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaac 413  Q
    ||||||||||||||  ||||||| ||||  |||||  |||||||||||||| |||| | ||||| |||| ||||||||||| | ||||||||| ||||||    
T  27109666 ttttttgttttatatgatttttgggggacgaaatgttattttggtattttaaacaatttgtacgcgggacaaaaagttgtgttgtggtttggtaaggaac 27109567  T
Q  414 aaaaatat 421  Q
    ||||||||    
T  27109566 aaaaatat 27109559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 219 - 318
Target Start/End: Original strand, 37861771 - 37861865
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaatagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttt 318  Q
    ||||||| |||||||||||| ||||| |||||||||     |||||||||||||| ||||||| |||| ||||||||||  ||| |||||||||||||||    
T  37861771 gtgtttgatttgcaaaacagtaagtactggacagaa-----cagtacaacacaaggcagaacagcacatgacaaattttttatggcattgagtaattttt 37861865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 316 - 409
Target Start/End: Original strand, 6460243 - 6460337
Alignment:
Q  316 ttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtggga-taaaaagttgtgatatggtttggtgag 409  Q
    |||||| |||||| |||||| | ||| ||||||  |||||||||||||||||||||  |||||||||  ||||||||||||| ||||||||||||    
T  6460243 ttttgtcttatacgattttttatggacaaaatgttattttggtattttagacaacttatacgtgggacaaaaaagttgtgatgtggtttggtgag 6460337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 305 - 410
Target Start/End: Complemental strand, 10320411 - 10320306
Alignment:
Q  305 attgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttg 404  Q
    ||||| |||||||| ||||||||| ||| |||   || ||||||  |||||| |||||||||||||| ||||||| | |||||||||||| | |||||||    
T  10320411 attgaataatttttggttttatacgattgttgttagacaaaatgttattttgatattttagacaacttgtacgtgtggtaaaaagttgtgttgtggtttg 10320312  T
Q  405 gtgagg 410  Q
    ||||||    
T  10320311 gtgagg 10320306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 256 - 376
Target Start/End: Original strand, 37474642 - 37474761
Alignment:
Q  256 agaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatttt 355  Q
    ||||||| |||| |||||  | |||| |||| ||||||||||  |||||||||| ||||||||| |||||||| ||||||| || | |||| || | |||    
T  37474642 agaacagcacaatacaagggataacagcacatgacaaattttt-atgacattgaataattttttattttatacgatttttggggaaaaaaacgctagttt 37474740  T
Q  356 ggtattttagacaactagtac 376  Q
    |||||||||||||||| ||||    
T  37474741 ggtattttagacaacttgtac 37474761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 264 - 418
Target Start/End: Complemental strand, 10656860 - 10656707
Alignment:
Q  264 acaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtatttt 363  Q
    ||||||||||||| ||||||  | ||||||||||  |||  ||||| ||||||||| |||||||| ||||||   ||| ||| ||  |||||| ||||||    
T  10656860 acaacacaagacataacaacgtatgacaaattttt-atgttattgaataattttttcttttatacgattttttgtggacaaattgttattttgatatttt 10656762  T
Q  364 agacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaa 418  Q
    |||||| | ||||||| || ||||||||||| | |||||| |||| | |||||||    
T  10656761 agacaatttgtacgtgagacaaaaagttgtgttgtggttttgtgaaggacaaaaa 10656707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 218 - 297
Target Start/End: Original strand, 21272587 - 21272676
Alignment:
Q  218 cgtgtttggtttgcaaaacagcaagtattggacaga----------atagaacagtacaacacaagacagaacaacacaggacaaatttt 297  Q
    ||||||||||||||||||||||||||||||||||||          ||||| |||||||||||||| ||||||| || ||||||||||||    
T  21272587 cgtgtttggtttgcaaaacagcaagtattggacagaacaatacaagatagatcagtacaacacaaggcagaacagcataggacaaatttt 21272676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 314 - 430
Target Start/End: Original strand, 17520583 - 17520690
Alignment:
Q  314 ttttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaac 413  Q
    ||||||||||||||| ||||||| |||| ||||||| |||||||        |||||| ||| |||||| ||||||||||| | ||||||||||||| ||    
T  17520583 ttttttgttttatacgatttttgggggacaaaatgctattttgg--------acaacttgtatgtgggacaaaaagttgtgttgtggtttggtgagggac 17520674  T
Q  414 aaaaatatgagtttttg 430  Q
     ||||||| ||||||||    
T  17520675 -aaaatataagtttttg 17520690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 351 - 417
Target Start/End: Original strand, 10932753 - 10932819
Alignment:
Q  351 attttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaa 417  Q
    ||||||||||||||||||| | |||||||| |  |||||||||||| |||||| |||||| ||||||    
T  10932753 attttggtattttagacaaattgtacgtggaactaaaagttgtgatgtggtttagtgagggacaaaa 10932819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 419
Target Start/End: Complemental strand, 16485943 - 16485829
Alignment:
Q  305 attgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttg 404  Q
    ||||| ||||||| ||| |||||  ||||||| | ||  |||||| ||||| |||||||||| ||||  ||||| ||| ||||||||||| | |||||||    
T  16485943 attgaataattttctgtattatatgatttttgggtgacgaaatgctatttttgtattttagaaaacttatacgtaggacaaaaagttgtgctgtggtttg 16485844  T
Q  405 gtgaggaacaaaaat 419  Q
    | |||| ||||||||    
T  16485843 gcgagggacaaaaat 16485829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 305 - 394
Target Start/End: Complemental strand, 16595283 - 16595194
Alignment:
Q  305 attgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtg 394  Q
    ||||| |||||||| || |||||| |||||||  | | |||| || ||||| |||||||||| |||| |||||||||| |||||||||||    
T  16595283 attgaataatttttggtcttatacgatttttggtgaacaaaaagctatttttgtattttagataacttgtacgtgggacaaaaagttgtg 16595194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 300 - 361
Target Start/End: Original strand, 32918851 - 32918912
Alignment:
Q  300 atgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtatt 361  Q
    |||||||| | |||||||||||||||||||||||| | ||||  |||||| |||||||||||    
T  32918851 atgacattaaataattttttgttttatacaattttggggggacgaaatgctattttggtatt 32918912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 313 - 413
Target Start/End: Complemental strand, 11926956 - 11926856
Alignment:
Q  313 attttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaa 412  Q
    |||||| || ||||||||||||||||| | ||||  | ||||||||||||||||||| | |||| || || |||||||| |  |||||||| ||| ||||    
T  11926956 atttttagtcttatacaatttttgaggcacaaaagactattttggtattttagacaaattgtacatgagacaaaaagttatagtatggtttagtggggaa 11926857  T
Q  413 c 413  Q
    |    
T  11926856 c 11926856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 313 - 393
Target Start/End: Original strand, 11944854 - 11944934
Alignment:
Q  313 attttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgt 393  Q
    |||||| || ||||||||||||||||| | ||||  | ||||||||||||||||||| | |||| || || ||||||||||    
T  11944854 atttttagtcttatacaatttttgaggcaaaaaagactattttggtattttagacaaattgtacatgagacaaaaagttgt 11944934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 351 - 418
Target Start/End: Complemental strand, 3801031 - 3800964
Alignment:
Q  351 attttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaa 418  Q
    ||||| |||||||||| |||||||| |||  | ||||||||||||| ||||||  |||||||||||||    
T  3801031 atttttgtattttagataactagtatgtgaaacaaaaagttgtgatgtggtttaatgaggaacaaaaa 3800964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 219 - 257
Target Start/End: Original strand, 35225538 - 35225576
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaatag 257  Q
    |||||||||||||||||||| ||||| ||||||||||||    
T  35225538 gtgtttggtttgcaaaacagtaagtactggacagaatag 35225576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 132; Significance: 2e-68; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 219 - 430
Target Start/End: Original strand, 7523046 - 7523268
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattg 308  Q
    |||||||||||||||||||| |||||||||||||||          ||||||||||||||||||| ||||||| |||||||||||||||  |||||||||    
T  7523046 gtgtttggtttgcaaaacaggaagtattggacagaacagtacaagatagaacagtacaacacaaggcagaacagcacaggacaaattttttatgacattg 7523145  T
Q  309 agtaatttt-ttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtg 407  Q
    ||||||||| ||||||||||| |||||||||||| ||||||| ||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||    
T  7523146 agtaatttttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgatgtggtttggtg 7523245  T
Q  408 aggaacaaaaatatgagtttttg 430  Q
    ||| |||||||||||||||||||    
T  7523246 agggacaaaaatatgagtttttg 7523268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 219 - 430
Target Start/End: Original strand, 2351555 - 2351776
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattg 308  Q
    |||||||||||||||||||||||||| |||||||||          ||||||||||||||||||| ||||||||||||||| |||||||  ||| |||||    
T  2351555 gtgtttggtttgcaaaacagcaagtactggacagaacagtacaagatagaacagtacaacacaaggcagaacaacacaggataaattttttatggcattg 2351654  T
Q  309 agtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtga 408  Q
    |||||||||||||||| ||| |||||||||||| ||||||  ||||||||||||||||||||| |||||||||| ||||||||||| | |||||||||||    
T  2351655 agtaattttttgttttgtacgatttttgagggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtga 2351754  T
Q  409 ggaacaaaaatatgagtttttg 430  Q
    || |||||||||||||||||||    
T  2351755 gggacaaaaatatgagtttttg 2351776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 219 - 430
Target Start/End: Complemental strand, 4818361 - 4818140
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattg 308  Q
    |||||||||||||||||||||||||| |||||||||          ||||||||| ||||||||| |||||||||||| ||||||||||  ||| |||||    
T  4818361 gtgtttggtttgcaaaacagcaagtactggacagaacagtacaagatagaacagtgcaacacaaggcagaacaacacaagacaaattttttatggcattg 4818262  T
Q  309 agtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtga 408  Q
    |||||||||||||||||||| |||||| ||||| ||||||| ||||||||||||||||||||| |||||||||| ||||||||||| | |||||||||||    
T  4818261 agtaattttttgttttatacgattttttagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtga 4818162  T
Q  409 ggaacaaaaatatgagtttttg 430  Q
    || |||||||||||||||||||    
T  4818161 gggacaaaaatatgagtttttg 4818140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 219 - 430
Target Start/End: Original strand, 35701152 - 35701373
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattg 308  Q
    |||||||||||||||||||||||||| |||||||||          ||||||||||||||||||| ||||| |||||||||||||||||  ||| || ||    
T  35701152 gtgtttggtttgcaaaacagcaagtactggacagaacagtacaagatagaacagtacaacacaaggcagaataacacaggacaaattttttatggcaatg 35701251  T
Q  309 agtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtga 408  Q
    |||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||| |||||||| | |||||||| || | |||||||||||    
T  35701252 agtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtggaacaaaaagttatgttgtggtttggtga 35701351  T
Q  409 ggaacaaaaatatgagtttttg 430  Q
    || |||||||||||||||||||    
T  35701352 gggacaaaaatatgagtttttg 35701373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 223 - 430
Target Start/End: Original strand, 29241272 - 29241474
Alignment:
Q  223 ttggtttgcaaaacagcaagtattggacagaatagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgtt 322  Q
    |||||||||||||||||||||| |||||||||     |||||||||||||| ||||||| |||||||||||||||  ||| |||||||||||||||||||    
T  29241272 ttggtttgcaaaacagcaagtactggacagaa-----cagtacaacacaaggcagaacagcacaggacaaattttttatggcattgagtaattttttgtt 29241366  T
Q  323 ttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatg 422  Q
    |||||| |||||||||||| ||||||| |||||| |||||||| ||||| |||||||||| ||||||||||| | |||||||| |||| |||||||||||    
T  29241367 ttatacgatttttgagggacaaaatgctattttgatattttagccaacttgtacgtgggacaaaaagttgtgctgtggtttggcgagggacaaaaatatg 29241466  T
Q  423 agtttttg 430  Q
    || |||||    
T  29241467 agcttttg 29241474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 219 - 430
Target Start/End: Complemental strand, 21739377 - 21739161
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattg 308  Q
    |||||||||||||||||||||||||| |||||| ||          |||||||||||||||||||||||||||     |||||||||||  ||| |||||    
T  21739377 gtgtttggtttgcaaaacagcaagtactggacataacaatataagatagaacagtacaacacaagacagaaca-----ggacaaattttttatggcattg 21739283  T
Q  309 agtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtga 408  Q
     |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| ||||||||||| | |||||||||||    
T  21739282 tgtaattttttgttttatacaatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtga 21739183  T
Q  409 ggaacaaaaatatgagtttttg 430  Q
    || |||||||||||||||||||    
T  21739182 gggacaaaaatatgagtttttg 21739161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 254 - 430
Target Start/End: Complemental strand, 31770767 - 31770591
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatt 353  Q
    |||||||||||||||||||| ||||||| |||||||||||||||  ||| ||||||||||||||||||||||||  |||||||||||| ||||||| |||    
T  31770767 atagaacagtacaacacaaggcagaacagcacaggacaaattttttatggcattgagtaattttttgttttatatgatttttgagggacaaaatgctatt 31770668  T
Q  354 ttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    ||||||||| |||||||| |||||||||| ||||||||||| | ||||||||||||| | |||||||||||||||||    
T  31770667 ttggtatttcagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggataaaaatatgagtttttg 31770591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 254 - 430
Target Start/End: Original strand, 32528635 - 32528811
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatt 353  Q
    |||||||||||||||| ||| ||||||| |||| ||||||||||  ||| |||||| |||||||||||||||||| |||||||||||| ||||||| |||    
T  32528635 atagaacagtacaacataaggcagaacagcacatgacaaattttttatggcattgaataattttttgttttatacgatttttgagggacaaaatgctatt 32528734  T
Q  354 ttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||||||||||||||| |||||||||| ||||||||||| | ||||||||||||| |||||||||||||||||||    
T  32528735 ttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttg 32528811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 219 - 430
Target Start/End: Complemental strand, 24181830 - 24181624
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaatagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttt 318  Q
    |||||||||||||||||||| ||||| |||||||||     |||||||||||||| ||||||| |||||||||||||||  ||| ||||||||||||| |    
T  24181830 gtgtttggtttgcaaaacagtaagtactggacagaa-----cagtacaacacaaggcagaacagcacaggacaaattttttatggcattgagtaatttgt 24181736  T
Q  319 tgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaa 418  Q
    |||||||||| || |||| |||| ||||||| |||||||||||||||||||||  ||||||||| |||||||| || | ||||||||||||| |||||||    
T  24181735 tgttttatacgatctttgggggacaaaatgctattttggtattttagacaacttatacgtgggacaaaaagttatgctgtggtttggtgagggacaaaaa 24181636  T
Q  419 tatgagtttttg 430  Q
    ||||||||||||    
T  24181635 tatgagtttttg 24181624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 219 - 430
Target Start/End: Original strand, 11963216 - 11963437
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattg 308  Q
    |||||||||||||||||||||||||| |||||||||          ||||||||||||||||||  ||||| |||||| ||||||||||  ||| |||||    
T  11963216 gtgtttggtttgcaaaacagcaagtactggacagaacagtacaagatagaacagtacaacacaaagcagaataacacatgacaaattttttatggcattg 11963315  T
Q  309 agtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtga 408  Q
    ||||||||| | |||||||| |||||||||||| ||||||| ||||||||||||||||||||| | |||||||| ||||||||||| | |||||||||||    
T  11963316 agtaattttgtattttatacgatttttgagggacaaaatgctattttggtattttagacaacttgcacgtgggacaaaaagttgtgctgtggtttggtga 11963415  T
Q  409 ggaacaaaaatatgagtttttg 430  Q
    || |||||||||||||||||||    
T  11963416 gggacaaaaatatgagtttttg 11963437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 219 - 428
Target Start/End: Complemental strand, 7208436 - 7208232
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaatagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttt 318  Q
    ||||||||||||||||||| |||||| |||||||||     |||||||| ||||||| ||||| ||| |||||||| ||  ||| |||||||||||||||    
T  7208436 gtgtttggtttgcaaaacaacaagtactggacagaa-----cagtacaatacaagacggaacagcacgggacaaatattttatggcattgagtaattttt 7208342  T
Q  319 tgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaa 418  Q
    |||||||||| |||||||||| | ||||||| ||||||||||||||||||||| ||||||| || ||||||||||| | ||||||||||||| |||||||    
T  7208341 tgttttatacgatttttgaggaacaaaatgctattttggtattttagacaacttgtacgtgagacaaaaagttgtgctgtggtttggtgagggacaaaaa 7208242  T
Q  419 tatgagtttt 428  Q
    ||||||||||    
T  7208241 tatgagtttt 7208232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 220 - 429
Target Start/End: Original strand, 41459480 - 41459684
Alignment:
Q  220 tgtttggtttgcaaaacagcaagtattggacagaatagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaatttttt 319  Q
    |||||||||||||||||||||||||||| ||||||     ||||||||||||||  |||||| |||||||||||  ||  ||| ||||||||||||||||    
T  41459480 tgtttggtttgcaaaacagcaagtattgaacagaa-----cagtacaacacaaggtagaacagcacaggacaaaaatttaatggcattgagtaatttttt 41459574  T
Q  320 gttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaat 419  Q
    ||||||||| |||||||||||| ||||||  |||||| |||||||||||||| |||||||| | ||||||||||| | ||||||||||||| ||||||||    
T  41459575 gttttatacgatttttgagggacaaaatgttattttgatattttagacaacttgtacgtggaacaaaaagttgtgctctggtttggtgagggacaaaaat 41459674  T
Q  420 atgagttttt 429  Q
    ||||||||||    
T  41459675 atgagttttt 41459684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 219 - 430
Target Start/End: Complemental strand, 31880282 - 31880076
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaatagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttt 318  Q
    ||||||| |||||||||||| ||||| |||||||||     |||||||||||||| |||||||  ||| ||||||||||  |||||||||| ||||||||    
T  31880282 gtgtttgatttgcaaaacagtaagtactggacagaa-----cagtacaacacaaggcagaacagtacatgacaaattttttatgacattgaataattttt 31880188  T
Q  319 tgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaa 418  Q
    ||| |||||| ||| ||| |||| ||||||| ||||||||||||||||||||| |||||| ||| ||| ||||||||| ||||||||||||| |||||||    
T  31880187 tgtattatacgattgttgggggacaaaatgctattttggtattttagacaacttgtacgtaggacaaatagttgtgatgtggtttggtgagggacaaaaa 31880088  T
Q  419 tatgagtttttg 430  Q
    ||||||||||||    
T  31880087 tatgagtttttg 31880076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 222 - 430
Target Start/End: Original strand, 34794765 - 34794983
Alignment:
Q  222 tttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagt 311  Q
    ||||||||||||||||| |||||||||||||||          ||||||||||||||||||| |||||||||||| || |||||||   || |||||| |    
T  34794765 tttggtttgcaaaacagtaagtattggacagaacagtacaagatagaacagtacaacacaaggcagaacaacacatgataaattttttgtggcattgaat 34794864  T
Q  312 aattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgagga 411  Q
    ||||||||||||||||| | ||||| || | ||||||| |||||||||||||||||||||  ||||||||| ||||||||||||| |||||||||||||     
T  34794865 aattttttgttttatacgaattttggggaacaaaatgctattttggtattttagacaacttatacgtgggacaaaaagttgtgatgtggtttggtgaggg 34794964  T
Q  412 acaaaaatatgagtttttg 430  Q
    |||||||||||||||||||    
T  34794965 acaaaaatatgagtttttg 34794983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 256 - 426
Target Start/End: Original strand, 40182386 - 40182556
Alignment:
Q  256 agaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatttt 355  Q
    |||||||||||||||||| || |||| |||| ||||||||||  ||| ||||||||||||||||||||||||| ||||||||| || ||||||| |||||    
T  40182386 agaacagtacaacacaaggcaaaacagcacatgacaaattttttatggcattgagtaattttttgttttatacgatttttgagagacaaaatgctatttt 40182485  T
Q  356 ggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtt 426  Q
    |||||||||||||||| |||| ||||| ||||||||||||| ||||||||||||| |||||||||| ||||    
T  40182486 ggtattttagacaacttgtacatgggacaaaaagttgtgatgtggtttggtgagggacaaaaatataagtt 40182556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 256 - 430
Target Start/End: Original strand, 24036155 - 24036326
Alignment:
Q  256 agaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatttt 355  Q
    ||||||| |||||| |||||||||||||||| ||||||||||   ||||||||| |||||||||||||||||| ||||||| ||   ||||||  |||||    
T  24036155 agaacagcacaacataagacagaacaacacatgacaaatttt---tgacattgaataattttttgttttatacgatttttggggtgcaaaatgttatttt 24036251  T
Q  356 ggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||    
T  24036252 ggtattttagacaacttgtacgtgggataaaaagttgtgatgtggtttggtgagggacaaaaatatgagattttg 24036326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 254 - 430
Target Start/End: Complemental strand, 6284475 - 6284298
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgc-aat 352  Q
    |||||||||||||||||||| ||| ||| |||| ||||||||||  ||| ||||||||||||||||||||||||| |||||||||||| ||||||| | |    
T  6284475 atagaacagtacaacacaaggcagtacagcacaagacaaattttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgctatt 6284376  T
Q  353 tttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    ||||||||||| ||||||| |||||||||| ||||||||||| | ||||||||||||| ||||||| || ||||||||    
T  6284375 tttggtattttggacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaaaataagtttttg 6284298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 257 - 430
Target Start/End: Original strand, 40489260 - 40489433
Alignment:
Q  257 gaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttg 356  Q
    ||||||||||||| ||  ||||||||  || ||||||||||  ||| |||||||||||||||||||||||||||||||||||||| ||||||  ||||||    
T  40489260 gaacagtacaacataaagcagaacaatgcatgacaaattttttatggcattgagtaattttttgttttatacaatttttgagggacaaaatgttattttg 40489359  T
Q  357 gtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    ||||||||||||||| ||| |||||| ||||||||||| | || |||||||||| |||||||||||||||||||    
T  40489360 gtattttagacaacttgtatgtgggacaaaaagttgtgctgtgatttggtgagggacaaaaatatgagtttttg 40489433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 253 - 430
Target Start/End: Complemental strand, 41790639 - 41790462
Alignment:
Q  253 aatagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaat 352  Q
    ||||||||||||||||||||| |||||||||||| ||||||| ||  ||| |||||||||||||| |||||||||| ||||||| |||| ||||||  ||    
T  41790639 aatagaacagtacaacacaaggcagaacaacacatgacaaatattttatggcattgagtaattttatgttttatacgatttttgggggacaaaatgttat 41790540  T
Q  353 tttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    ||| ||||||||||||| | ||||||| || ||||||||||| | ||||||||||||| |||||||||||||||||||    
T  41790539 tttagtattttagacaatttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttg 41790462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 254 - 430
Target Start/End: Original strand, 39918427 - 39918603
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatt 353  Q
    ||||||||||||||||||||  ||||||||||||||||||| ||  ||   ||||||||||||| |||||||||| ||||||| |||| ||||||  |||    
T  39918427 atagaacagtacaacacaaggtagaacaacacaggacaaatattttatagtattgagtaattttatgttttatacgatttttgggggacaaaatgttatt 39918526  T
Q  354 ttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||||||||||||||| ||||||| || ||||||||||| | ||||||||||||| |||||||||||||||||||    
T  39918527 ttggtattttagacaacttgtacgtgagacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttg 39918603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 254 - 430
Target Start/End: Complemental strand, 28090696 - 28090520
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatt 353  Q
    ||||||||||||||| || | |||||||  ||||||||||||||  ||   |||||||||||||||||||||||| |||||||||||| ||||||  |||    
T  28090696 atagaacagtacaactcacggcagaacagtacaggacaaattttttatattattgagtaattttttgttttatacgatttttgagggacaaaatgttatt 28090597  T
Q  354 ttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    || ||||||||||||||| |||||||||| ||||||||||| | | ||||||||||| |||||||||||||||||||    
T  28090596 tttgtattttagacaacttgtacgtgggacaaaaagttgtgttgtagtttggtgagggacaaaaatatgagtttttg 28090520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 219 - 430
Target Start/End: Complemental strand, 23091510 - 23091304
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaatagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttt 318  Q
    |||||||||||||||||||| ||||| |     ||| ||||||||||||||||||| ||||||||||| |||||||||   ||| ||||||||||| |||    
T  23091510 gtgtttggtttgcaaaacagtaagtaat-----gaacagaacagtacaacacaagatagaacaacacaagacaaatttcttatggcattgagtaatgttt 23091416  T
Q  319 tgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaa 418  Q
    |||||||||| |||||||||||| ||||||  |||||| |||||||||||| |  |||||| || ||||||||||| | ||||||| ||| | |||||||    
T  23091415 tgttttatacgatttttgagggacaaaatgttattttgatattttagacaatttatacgtgagacaaaaagttgtgttgtggtttgatgacggacaaaaa 23091316  T
Q  419 tatgagtttttg 430  Q
    ||||||||||||    
T  23091315 tatgagtttttg 23091304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 256 - 430
Target Start/End: Original strand, 39788114 - 39788289
Alignment:
Q  256 agaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaa-tgcaattt 354  Q
    |||||||||||||| ||  ||||||| |||| ||||||||||  |||  |||||||||||||||||||||||| ||||||| |||| |||| ||  ||||    
T  39788114 agaacagtacaacataatgcagaacagcacatgacaaattttttatggtattgagtaattttttgttttatacgatttttgggggacaaaaatgttattt 39788213  T
Q  355 tggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    | ||||||||||||||| |||||||||| ||||||||||||| ||||||||||||| |||||||||||||||||||    
T  39788214 tagtattttagacaacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttg 39788289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 266 - 430
Target Start/End: Complemental strand, 5571806 - 5571644
Alignment:
Q  266 aacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttag 365  Q
    |||||||| ||||||| |||||||||||||||  ||| ||||||||||||||||||||||||| ||||||| |||| ||  ||| |||||||||||||||    
T  5571806 aacacaaggcagaacagcacaggacaaattttttatggcattgagtaattttttgttttatacgatttttgggggacaa--tgctattttggtattttag 5571709  T
Q  366 acaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||| |||||| ||| ||||||||||| | ||||||||||||| |||||||||||| ||||||    
T  5571708 acaacttgtacgttggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgaatttttg 5571644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 254 - 430
Target Start/End: Original strand, 8136759 - 8136933
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatt 353  Q
    |||||||||||||||||||| || ||||||||||||||| ||||  ||| ||||||||||| ||||||||||||| ||||||  |||| ||  ||  |||    
T  8136759 atagaacagtacaacacaaggcataacaacacaggacaatttttttatggcattgagtaatgttttgttttatactattttttggggacaa--tgttatt 8136856  T
Q  354 ttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||||||||||||||| |||||| ||| ||||||||||| | ||||||||||||| |||||||||||||||||||    
T  8136857 ttggtattttagacaacttgtacgtaggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttg 8136933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 264 - 430
Target Start/End: Complemental strand, 22493584 - 22493419
Alignment:
Q  264 acaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtatttt 363  Q
    ||||||||||  |||||| ||||| |||||||||  ||| || |||||||||||||||||||||| ||||||| || | ||||||| |||||| ||||||    
T  22493584 acaacacaaggtagaacagcacagaacaaattttttatggcaatgagtaattttttgttttatacgatttttgcgg-acaaaatgctattttgatatttt 22493486  T
Q  364 agacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||||| ||||||| || ||||||||||| | ||||||||||||| |||||||||||||||||||    
T  22493485 agacaacttgtacgtgtgacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttg 22493419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 276 - 430
Target Start/End: Original strand, 31644389 - 31644542
Alignment:
Q  276 agaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagta 375  Q
    ||||||||||| ||||||||||  |||||||||| ||||||| |||||||||  ||||||  |||| ||||||| ||||||||||||||||||||| |||    
T  31644389 agaacaacacaagacaaattttt-atgacattgaataattttatgttttatatgatttttaggggacaaaatgctattttggtattttagacaacttgta 31644487  T
Q  376 cgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    ||||||| ||||||||||| | ||||||||||||| |||||||||||||| ||||    
T  31644488 cgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtatttg 31644542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 276 - 430
Target Start/End: Original strand, 3735300 - 3735453
Alignment:
Q  276 agaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagta 375  Q
    |||||| || ||||||||||||  |||||||||| |||||||||||||||||| |||||||  ||| ||||||  ||||||||||||||||||||| |||    
T  3735300 agaacagcataggacaaattttt-atgacattgaataattttttgttttatacgatttttggaggacaaaatgttattttggtattttagacaacttgta 3735398  T
Q  376 cgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    ||||||| ||||||||||| | ||||||||||| | |||||||||| ||||||||    
T  3735399 cgtgggacaaaaagttgtgctgtggtttggtgatggacaaaaatatcagtttttg 3735453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 221 - 430
Target Start/End: Complemental strand, 7770497 - 7770279
Alignment:
Q  221 gtttggtttgcaaaacagcaagtattggacagaat----------agaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgag 310  Q
    |||||||||||||||||||||||| |||||| |||          ||||||  |||||||||||||||| | |||||||||||||||  ||||||||||     
T  7770497 gtttggtttgcaaaacagcaagtactggacataatcgtacaagacagaacaacacaacacaagacagaatagcacaggacaaattttt-atgacattgaa 7770399  T
Q  311 taattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgagg 410  Q
    |||||||||||||||||| ||||||| ||    |||||  ||||| ||||||||| ||||| |||||||||| ||||||||||| | ||||||||||| |    
T  7770398 taattttttgttttatacgatttttggggctcgaaatgttatttttgtattttaggcaacttgtacgtgggacaaaaagttgtgctgtggtttggtgaag 7770299  T
Q  411 aacaaaaatatgagtttttg 430  Q
     ||||||||||| |||||||    
T  7770298 gacaaaaatatgtgtttttg 7770279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 276 - 430
Target Start/End: Complemental strand, 8561134 - 8560982
Alignment:
Q  276 agaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagta 375  Q
    ||||||| ||| ||||||||||  ||| |||||| |||||||||||||||||| ||||||| ||||  |||||  ||||||||||||||||||||| |||    
T  8561134 agaacaaaacatgacaaattttt-atggcattgattaattttttgttttatacgatttttg-gggacgaaatgttattttggtattttagacaacttgta 8561037  T
Q  376 cgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    | ||| | ||||||||||||| |||||||||||||||||||||||| ||||||||    
T  8561036 cctggaacaaaaagttgtgatgtggtttggtgaggaacaaaaatatcagtttttg 8560982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 258 - 431
Target Start/End: Original strand, 5673068 - 5673236
Alignment:
Q  258 aacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttgg 357  Q
    ||||| |||||||||| || |||| || ||||||||| ||  ||| || |||||||||||||||||||||| ||||||| |||| ||||||  ||||||     
T  5673068 aacagcacaacacaaggcataacatcaaaggacaaatattttatggcaatgagtaattttttgttttatacgatttttgggggacaaaatgttattttga 5673167  T
Q  358 tattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttga 431  Q
    ||||||||||     |||||||||| ||||||||||| | ||||||||||||| ||||||||||||||||||||    
T  5673168 tattttagac-----gtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttga 5673236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 279 - 430
Target Start/End: Original strand, 553341 - 553493
Alignment:
Q  279 acaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgaggg-agaaaatgcaattttggtattttagacaactagtacg 377  Q
    |||| ||||||||||| ||  ||| |||||| ||||||| |||||||||| ||||||| ||| | ||||||  ||||||||||||||||||||| |||||    
T  553341 acaatacaggacaaatattttatggcattgaataattttatgttttatacgatttttggggggacaaaatgttattttggtattttagacaacttgtacg 553440  T
Q  378 tgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    ||||| ||||||||||| | ||||||||||||  |||||||||||||||||||    
T  553441 tgggacaaaaagttgtgttgtggtttggtgagagacaaaaatatgagtttttg 553493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 263 - 430
Target Start/End: Complemental strand, 700768 - 700601
Alignment:
Q  263 tacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattt 362  Q
    |||||||||||  |||||| |||| |||||| |||  ||| || |||||||||||||||||||||  ||||| | |||| |||||   ||||||||||||    
T  700768 tacaacacaaggtagaacagcacatgacaaaatttttatggcaatgagtaattttttgttttatatgattttcgggggacaaaataatattttggtattt 700669  T
Q  363 tagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||| |||| ||||||| || ||||||||||| | |||||||||||||||||||||||||| ||||||    
T  700668 tagataacttgtacgtgagacaaaaagttgtgttgtggtttggtgaggaacaaaaatatgaatttttg 700601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 264 - 430
Target Start/End: Complemental strand, 4689863 - 4689698
Alignment:
Q  264 acaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtatttt 363  Q
    |||||| ||| |||||||||||| ||||||||||  |||||||||| |||||||||||||||||| | ||||| ||    |||||  ||||| |||||||    
T  4689863 acaacataaggcagaacaacacatgacaaattttt-atgacattgaataattttttgttttatacgacttttggggctcgaaatgttatttttgtatttt 4689765  T
Q  364 agacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    || ||||| |||||||||| ||||||||||| | ||||||||||||| ||||||||||| |||||||    
T  4689764 aggcaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgtgtttttg 4689698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 256 - 430
Target Start/End: Complemental strand, 18470601 - 18470428
Alignment:
Q  256 agaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatttt 355  Q
    ||||||| |||| |||||||| |||| ||||| |||||||||  |||  ||||| |||||| ||||||||||   |||||| ||||  |||||  |||||    
T  18470601 agaacagcacaatacaagacataacagcacagaacaaattttt-atggtattgaataatttcttgttttatatgctttttgggggacgaaatgttatttt 18470503  T
Q  356 ggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    ||| |||||||||||| |||||||||||||||||||||| | ||||||||| ||| |||||||| | ||||||||    
T  18470502 ggtgttttagacaacttgtacgtgggataaaaagttgtgctgtggtttggtaagggacaaaaatttcagtttttg 18470428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 305 - 430
Target Start/End: Complemental strand, 7725934 - 7725809
Alignment:
Q  305 attgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttg 404  Q
    ||||| |||||||||||||||||| ||||||| ||||  |||||| |||||||   |||||||||||  ||||||||| ||||||||||| | ||||||     
T  7725934 attgaataattttttgttttatacgatttttgggggacgaaatgctattttggatatttagacaacttatacgtgggacaaaaagttgtgttgtggttta 7725835  T
Q  405 gtgaggaacaaaaatatgagtttttg 430  Q
     ||| | |||||||||||||||||||    
T  7725834 atgaaggacaaaaatatgagtttttg 7725809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 314 - 430
Target Start/End: Complemental strand, 22432425 - 22432309
Alignment:
Q  314 ttttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaac 413  Q
    |||||| |||||||| ||||||| ||||  |||||| ||||||||||||||||||||| |||| || || ||||| ||||| | ||||||| ||||| ||    
T  22432425 tttttttttttatacgatttttgggggacgaaatgctattttggtattttagacaacttgtacttgagacaaaaaattgtgttgtggtttgatgagggac 22432326  T
Q  414 aaaaatatgagtttttg 430  Q
    |||||||| ||||||||    
T  22432325 aaaaatatcagtttttg 22432309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 314 - 430
Target Start/End: Complemental strand, 32093097 - 32092982
Alignment:
Q  314 ttttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaac 413  Q
    |||| ||||||||| |||||||| ||||  |||||| |||||||||||||||| || | |||||||||| ||||||||||| | ||||||||||||| ||    
T  32093097 ttttatgttttatataatttttgggggacgaaatgctattttggtattttagataatttgtacgtgggacaaaaagttgtgctgtggtttggtgagg-ac 32092999  T
Q  414 aaaaatatgagtttttg 430  Q
    |||||| | ||||||||    
T  32092998 aaaaatttcagtttttg 32092982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 323 - 419
Target Start/End: Complemental strand, 27839180 - 27839084
Alignment:
Q  323 ttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaat 419  Q
    |||||| |||||||  ||| |||| || ||||||||||||||||||||| |||| || || ||||||||||  ||||||||||||||| ||||||||    
T  27839180 ttatacgatttttggaggacaaaaggctattttggtattttagacaacttgtacatgagacaaaaagttgttttatggtttggtgagggacaaaaat 27839084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 219 - 254
Target Start/End: Original strand, 20119646 - 20119681
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaa 254  Q
    |||||||||||||||||||| |||||||||||||||    
T  20119646 gtgtttggtttgcaaaacagtaagtattggacagaa 20119681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 256 - 371
Target Start/End: Complemental strand, 37148747 - 37148633
Alignment:
Q  256 agaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatttt 355  Q
    ||||||| ||||||||||  | |||| |||||||||||||||  |||  ||||| |||||| || |||||||   |||||| ||||  |||||| |||||    
T  37148747 agaacagcacaacacaaggtataacagcacaggacaaattttt-atggtattgaataatttcttattttatattctttttgggggacgaaatgctatttt 37148649  T
Q  356 ggtattttagacaact 371  Q
    ||| ||||||||||||    
T  37148648 ggtgttttagacaact 37148633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 373 - 418
Target Start/End: Complemental strand, 26180351 - 26180306
Alignment:
Q  373 gtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaa 418  Q
    |||||| |||||||||||||||||||||||| |||| |||| ||||    
T  26180351 gtacgtaggataaaaagttgtgatatggtttagtgaagaactaaaa 26180306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 132; Significance: 2e-68; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 219 - 430
Target Start/End: Complemental strand, 20609842 - 20609636
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaatagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttt 318  Q
    |||||||||||||||||||| ||||| |||||||||     |||||||||||||| ||||||| |||||||||||||||  |||||||||||||||||||    
T  20609842 gtgtttggtttgcaaaacagtaagtactggacagaa-----cagtacaacacaaggcagaacagcacaggacaaattttttatgacattgagtaattttt 20609748  T
Q  319 tgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaa 418  Q
    |||| ||||| |||||||||||| ||||||| ||||||||||||||||||||| |||||||||| ||||||||||| | ||||||||||||| |||||||    
T  20609747 tgttatatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaa 20609648  T
Q  419 tatgagtttttg 430  Q
    ||||||||||||    
T  20609647 tatgagtttttg 20609636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 254 - 430
Target Start/End: Original strand, 28675711 - 28675887
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatt 353  Q
    |||||||||||||||||||| |||||||||||||||||||||||  ||| ||||||||||||||||||||||||| |||||||||||| ||||||| |||    
T  28675711 atagaacagtacaacacaaggcagaacaacacaggacaaattttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgctatt 28675810  T
Q  354 ttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||||||||||||||| |||||||||| ||||||||||| | ||||||||||||| |||||||||||||||||||    
T  28675811 ttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttg 28675887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 219 - 430
Target Start/End: Original strand, 34026558 - 34026764
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaatagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttt 318  Q
    |||||||||||||||||||| ||||| |||||||||     |||||||||||||| ||||||| |||||||||||||||  |||  ||||||||||||||    
T  34026558 gtgtttggtttgcaaaacagtaagtactggacagaa-----cagtacaacacaaggcagaacagcacaggacaaattttttatggtattgagtaattttt 34026652  T
Q  319 tgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaa 418  Q
    |||||||||| |||||||||||| ||||||| ||||||||||||||||||||| |||||||||| ||||| ||||| | ||||||||||||| |||||||    
T  34026653 tgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaaattgtgttgtggtttggtgagggacaaaaa 34026752  T
Q  419 tatgagtttttg 430  Q
    ||||||||||||    
T  34026753 tatgagtttttg 34026764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 219 - 430
Target Start/End: Original strand, 44116830 - 44117036
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaatagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttt 318  Q
    |||||||||||||||||||||||||| ||||     ||||||||||||||||||| ||||||| |||||||||||||||  ||| |||||||||||||||    
T  44116830 gtgtttggtttgcaaaacagcaagtactgga-----tagaacagtacaacacaagtcagaacagcacaggacaaattttttatggcattgagtaattttt 44116924  T
Q  319 tgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaa 418  Q
    |||||||||| |||||||||||| ||||||| ||||| ||||||||||||||| |||||||||| |||||||||||   ||||||| ||||| |||||||    
T  44116925 tgttttatacgatttttgagggacaaaatgctatttttgtattttagacaacttgtacgtgggacaaaaagttgtgcagtggtttgatgagggacaaaaa 44117024  T
Q  419 tatgagtttttg 430  Q
    ||||||||||||    
T  44117025 tatgagtttttg 44117036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 254 - 430
Target Start/End: Complemental strand, 21221524 - 21221348
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatt 353  Q
    |||||||||||||||| ||| ||||||| |||| ||||||||||  ||| |||||||||||||||||||||||||||||||||||||| ||||||| |||    
T  21221524 atagaacagtacaacataaggcagaacagcacaagacaaattttttatggcattgagtaattttttgttttatacaatttttgagggacaaaatgctatt 21221425  T
Q  354 ttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||||||||||||||| ||||||| || ||||||||||| | ||||||||||||| |||||||||||||||||||    
T  21221424 ttggtattttagacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttg 21221348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 219 - 430
Target Start/End: Complemental strand, 42636597 - 42636391
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaatagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttt 318  Q
    ||||||||||||||||||| |||||| | ||||||||||     ||||||||||| ||||||| |||||||||||||||  ||| |||| ||||||||||    
T  42636597 gtgtttggtttgcaaaacaacaagtactagacagaatag-----tacaacacaaggcagaacagcacaggacaaattttttatggcattaagtaattttt 42636503  T
Q  319 tgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaa 418  Q
    ||||||| || |||||||||||| ||||||  ||||||||||||||||||||| |||||||||| ||||||||||| | ||||||||||||| |||||||    
T  42636502 tgttttaaacgatttttgagggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaa 42636403  T
Q  419 tatgagtttttg 430  Q
    ||||||||||||    
T  42636402 tatgagtttttg 42636391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 219 - 430
Target Start/End: Original strand, 2134946 - 2135167
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattg 308  Q
    |||||||||||||||||||||||||| | |||||||          ||||||||||||||||||| |||||||||||| ||||||||||  ||| |||||    
T  2134946 gtgtttggtttgcaaaacagcaagtactagacagaacgttacaagatagaacagtacaacacaaggcagaacaacacaagacaaattttttatggcattg 2135045  T
Q  309 agtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtga 408  Q
    |||||||||||||||||||| |||||||||||| ||| ||| |||||||||||||||| || | |||||||||| ||||||||||| | |||||||||||    
T  2135046 agtaattttttgttttatacgatttttgagggacaaagtgctattttggtattttagataatttgtacgtgggacaaaaagttgtgctgtggtttggtga 2135145  T
Q  409 ggaacaaaaatatgagtttttg 430  Q
    || |||||||||||||||||||    
T  2135146 gggacaaaaatatgagtttttg 2135167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 254 - 427
Target Start/End: Complemental strand, 1344871 - 1344698
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatt 353  Q
    |||||||||||||||||||||||||||| |||| ||||| ||||  ||| ||||||||||||||||||||||||| |||||||||||| ||||||| |||    
T  1344871 atagaacagtacaacacaagacagaacatcacatgacaatttttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgctatt 1344772  T
Q  354 ttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagttt 427  Q
    |||||||||||||||||| ||||||| || ||||||||||| | ||||||||||||| ||||||||||||||||    
T  1344771 ttggtattttagacaacttgtacgtgagacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagttt 1344698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 254 - 430
Target Start/End: Complemental strand, 12349335 - 12349159
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatt 353  Q
    |||||||||||||||||||| ||||||| |||| ||||||||||  ||| ||||||||||||||||||||||||| |||||||||||| ||||||| |||    
T  12349335 atagaacagtacaacacaaggcagaacagcacatgacaaattttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgctatt 12349236  T
Q  354 ttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||||||||||||||| |||||||||| | ||||||||| | ||||||||||||  |||||||||||||||||||    
T  12349235 ttggtattttagacaacttgtacgtgggacataaagttgtgctgtggtttggtgagagacaaaaatatgagtttttg 12349159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 219 - 430
Target Start/End: Complemental strand, 47958641 - 47958420
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattg 308  Q
    |||||||||||||||||||||||||| |||||||||          ||||||| ||||| ||||| ||||||| || || |||||||||  ||| |||||    
T  47958641 gtgtttggtttgcaaaacagcaagtactggacagaacaatacaagatagaacactacaatacaaggcagaacagcatagaacaaattttttatgtcattg 47958542  T
Q  309 agtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtga 408  Q
    |||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||| |||||||||| ||||||||||| | | |||||||||    
T  47958541 agtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtagtttggtga 47958442  T
Q  409 ggaacaaaaatatgagtttttg 430  Q
    || |||||||||||||||||||    
T  47958441 gggacaaaaatatgagtttttg 47958420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 254 - 419
Target Start/End: Complemental strand, 4851620 - 4851455
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatt 353  Q
    |||||||||||||||||||| |||||||| ||||||||||||||  ||| ||||||||||||||||||||||||| |||||||||||| ||||||| |||    
T  4851620 atagaacagtacaacacaaggcagaacaagacaggacaaattttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgctatt 4851521  T
Q  354 ttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaat 419  Q
    |||||||||||||||||| |||||||||| ||||||||||| | ||| ||||||||| ||||||||    
T  4851520 ttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtgggttggtgagggacaaaaat 4851455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 219 - 430
Target Start/End: Complemental strand, 26282596 - 26282375
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattg 308  Q
    |||||||||||||||||||||||||| |||| ||||          ||||||||||||||||||||||||||| |||| ||||||||||  ||| |||||    
T  26282596 gtgtttggtttgcaaaacagcaagtactggatagaacagtacaagatagaacagtacaacacaagacagaacagcacatgacaaattttttatggcattg 26282497  T
Q  309 agtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtga 408  Q
    | |||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||  ||||||||| ||||||||||| | ||||||| |||    
T  26282496 aataattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttatacgtgggacaaaaagttgtgctgtggtttgatga 26282397  T
Q  409 ggaacaaaaatatgagtttttg 430  Q
    |  |||||||||| ||||||||    
T  26282396 gagacaaaaatataagtttttg 26282375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 219 - 430
Target Start/End: Original strand, 29584751 - 29584972
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattg 308  Q
    |||||||||||||||||||||||||| |||||||||          ||||||||||||||| ||| |||||||  |||| |||||||||  ||  |||||    
T  29584751 gtgtttggtttgcaaaacagcaagtactggacagaacagtacaagatagaacagtacaacataaggcagaacagtacagaacaaattttttattgcattg 29584850  T
Q  309 agtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtga 408  Q
    ||||||||||| |||||||| |||||||| ||| ||||||| ||||||||||||||||||||| |||||||||| ||||||||||| | |||||||||||    
T  29584851 agtaattttttattttatacgatttttgaaggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtga 29584950  T
Q  409 ggaacaaaaatatgagtttttg 430  Q
    || |||||||||||||||||||    
T  29584951 gggacaaaaatatgagtttttg 29584972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 254 - 430
Target Start/End: Original strand, 40094424 - 40094600
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatt 353  Q
    |||||||| ||||||||||| |||||||||||| |||||| |||  ||| ||||||||||||||||||||||| | |||||||||||| ||||||| |||    
T  40094424 atagaacaatacaacacaaggcagaacaacacatgacaaaatttttatggcattgagtaattttttgttttatgcgatttttgagggacaaaatgctatt 40094523  T
Q  354 ttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||||||||||||| | |||||||  | ||||||||||||| ||||||||||||| |||||||||||||||||||    
T  40094524 ttggtattttagacaatttgtacgtgaaacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttg 40094600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 254 - 430
Target Start/End: Complemental strand, 51259944 - 51259768
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatt 353  Q
    |||||||||||||||||||| ||||||| |||| |||||| |||  ||| ||||||||||||||||||||||||  |||||| ||||| ||||||  |||    
T  51259944 atagaacagtacaacacaaggcagaacagcacaagacaaaatttttatggcattgagtaattttttgttttatatgatttttaagggacaaaatgttatt 51259845  T
Q  354 ttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||||||||||||||| |||||||||| |||||||||||   ||||||||||||| |||||||||||||||||||    
T  51259844 ttggtattttagacaacttgtacgtgggacaaaaagttgtgccgtggtttggtgagggacaaaaatatgagtttttg 51259768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 258 - 430
Target Start/End: Complemental strand, 53557955 - 53557783
Alignment:
Q  258 aacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttgg 357  Q
    |||||||||||||||| ||||||| |||| ||||||||||  ||| ||||||||||||||||||||||||| |||||||| ||| ||||||| |||||||    
T  53557955 aacagtacaacacaaggcagaacagcacatgacaaattttttatggcattgagtaattttttgttttatacgatttttgaaggacaaaatgctattttgg 53557856  T
Q  358 tattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||||||||||| ||||||| || |||||||||||   ||||||||||||| |||||| ||||||||||||    
T  53557855 tattttagacaacttgtacgtgagacaaaaagttgtgcagtggtttggtgagggacaaaactatgagtttttg 53557783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 254 - 430
Target Start/End: Complemental strand, 39053003 - 39052826
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgc-atgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaat 352  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||   ||  ||||||||||||| ||||||||||| ||||||| |||| ||||||  ||    
T  39053003 atagaacagtacaacacaagatagaacaacacatgacaaatttttttatagcattgagtaatttgttgttttatacgatttttgggggacaaaatgttat 39052904  T
Q  353 tttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    ||||||||||||||||||| |||||||||| ||||||||||| | ||||||||||||  |||||||||||||||||||    
T  39052903 tttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagagacaaaaatatgagtttttg 39052826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 254 - 430
Target Start/End: Complemental strand, 25860585 - 25860409
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatt 353  Q
    ||||||||| |||||| ||| || ||||||||||||||||||||  ||| || |||||||||||||||||||||| |||||||  | | ||||||| |||    
T  25860585 atagaacagcacaacaaaaggcataacaacacaggacaaattttttatggcaatgagtaattttttgttttatacgatttttggagaacaaaatgctatt 25860486  T
Q  354 ttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    | |||||||||||||||| ||||||| || ||||||||||||| ||||||||||||| |||||||||||||||||||    
T  25860485 tcggtattttagacaacttgtacgtgagacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttg 25860409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 256 - 430
Target Start/End: Complemental strand, 31883183 - 31883010
Alignment:
Q  256 agaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatttt 355  Q
    ||||||| |||| |||||  ||||||||||||||||||||||  |||||||||| |||||||||||||||||| ||||||| |||| ||||||| |||||    
T  31883183 agaacagcacaatacaagggagaacaacacaggacaaattttt-atgacattgaataattttttgttttatacgatttttgggggacaaaatgctatttt 31883085  T
Q  356 ggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    | |||||||||||||| |||||||||| ||||||||||| | ||||||| ||||| |||||||||| ||||||||    
T  31883084 gatattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttgctgaggcacaaaaatatcagtttttg 31883010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 254 - 430
Target Start/End: Complemental strand, 3864838 - 3864663
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatt 353  Q
    |||||||| ||||||| ||  || |||| |||||||||||||||  ||| ||||||||||||||||||||||||  ||||||| |||| ||||||| |||    
T  3864838 atagaacattacaacataacgcataacagcacaggacaaattttttatggcattgagtaattttttgttttatatgatttttg-gggacaaaatgctatt 3864740  T
Q  354 ttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||||||||||||||| |||||||||| ||||||||||| | |||||||| |||| |||||||||||||||||||    
T  3864739 ttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggcgagggacaaaaatatgagtttttg 3864663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 254 - 430
Target Start/End: Complemental strand, 25927491 - 25927315
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatt 353  Q
    |||||||||||||| |||||  |||||| |||| ||||||||||  ||| |||||||| |||||||||||||||| |||||||||| | ||||||  |||    
T  25927491 atagaacagtacaatacaaggtagaacagcacaagacaaattttttatggcattgagtgattttttgttttatacgatttttgaggaacaaaatgttatt 25927392  T
Q  354 ttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||||||||||||||| |||||||||| ||||||||||| | || |||||| ||| |||||||||||||||||||    
T  25927391 ttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtgttttggtaagggacaaaaatatgagtttttg 25927315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 219 - 418
Target Start/End: Original strand, 5442167 - 5442376
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattg 308  Q
    ||||||||||||||||| |||||||| |||||||||          ||||||||||||| |||||  | ||||||||| ||||||||||  ||| |||||    
T  5442167 gtgtttggtttgcaaaatagcaagtactggacagaacagtacaatttagaacagtacaatacaaggtataacaacacatgacaaattttttatggcattg 5442266  T
Q  309 agtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtga 408  Q
    | |||||||||||||||||| |||||||||||| ||||||| |||||| ||||||||||| || |||||||||| ||||||||||| | || ||||||||    
T  5442267 aataattttttgttttatacgatttttgagggataaaatgctattttgatattttagacagcttgtacgtgggacaaaaagttgtgctgtgatttggtga 5442366  T
Q  409 ggaacaaaaa 418  Q
    || |||||||    
T  5442367 gggacaaaaa 5442376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 264 - 430
Target Start/End: Complemental strand, 33364931 - 33364766
Alignment:
Q  264 acaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtatttt 363  Q
    |||| |||||| |||||||| |||||||||||||  |||||||||| |||||||||||||||||| ||||||| |||| ||||||| |||||| ||||||    
T  33364931 acaatacaagagagaacaacccaggacaaattttt-atgacattgaataattttttgttttatacgatttttgggggacaaaatgctattttgatatttt 33364833  T
Q  364 agacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||||| ||||||| || ||||||||||||| ||||||| |||||  ||||||||| ||||||||    
T  33364832 agacaacttgtacgtgagacaaaaagttgtgatgtggtttgctgaggggcaaaaatatcagtttttg 33364766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 274 - 430
Target Start/End: Original strand, 20254986 - 20255141
Alignment:
Q  274 acagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactag 373  Q
    |||| |||||||| ||||||||||  ||| ||||||||||||||||||||||||  |||||||||||| ||||||  ||||||||||||||||||||| |    
T  20254986 acagtacaacacaagacaaattttttatggcattgagtaattttttgttttataagatttttgagggacaaaatgttattttggtattttagacaacttg 20255085  T
Q  374 tacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    || |||||| || |||||||| | ||||||||||||| |||||||||||||||||||    
T  20255086 ta-gtgggacaagaagttgtgctgtggtttggtgagggacaaaaatatgagtttttg 20255141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 254 - 430
Target Start/End: Original strand, 24571202 - 24571378
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatt 353  Q
    |||||||| ||||||| ||| |||||||  ||| ||||||||||  ||| ||||||||||||| ||||||||| | ||||||| |||| ||||| | |||    
T  24571202 atagaacaatacaacataaggcagaacagtacatgacaaattttttatggcattgagtaatttgttgttttattcgatttttgggggacaaaatcctatt 24571301  T
Q  354 ttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    || ||||||||||||||| |||| ||||| ||||||||||| | ||||||||||||| |||||||||||||||||||    
T  24571302 tttgtattttagacaacttgtacatgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttg 24571378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 254 - 394
Target Start/End: Complemental strand, 53046805 - 53046670
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatt 353  Q
    |||||||||||||||||||| ||||||||||||| |||||||||  ||| ||||||||||||||||||||||||| |||||||||||| ||||||| |||    
T  53046805 atagaacagtacaacacaaggcagaacaacacagaacaaattttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgctatt 53046706  T
Q  354 ttggtattttagacaactagtacgtgggataaaaagttgtg 394  Q
    ||||||||||||||     |||||||||| |||||||||||    
T  53046705 ttggtattttagac-----gtacgtgggacaaaaagttgtg 53046670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 275 - 430
Target Start/End: Original strand, 38213296 - 38213451
Alignment:
Q  275 cagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagt 374  Q
    ||||||| |||| ||||||||||  ||| || |||||||||||||||||||||| ||||||| |||| ||||||  ||||||||||||||||||||| ||    
T  38213296 cagaacagcacatgacaaattttttatggcaatgagtaattttttgttttatacgatttttgggggacaaaatggtattttggtattttagacaacttgt 38213395  T
Q  375 acgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||||| ||||||||||| | |||||| |||||  |||||||||||||||||||    
T  38213396 acgtgggacaaaaagttgtgttgtggtttcgtgagtgacaaaaatatgagtttttg 38213451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 219 - 409
Target Start/End: Complemental strand, 3695481 - 3695301
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaatagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttt 318  Q
    |||||||||||||||||  | ||||| |||||     |||||||||||||||||| ||||     ||||||||||||||  ||| ||||||||||||| |    
T  3695481 gtgtttggtttgcaaaaatgtaagtactggac-----agaacagtacaacacaaggcaga-----acaggacaaattttttatggcattgagtaatttgt 3695392  T
Q  319 tgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgag 409  Q
    |||||||||||||||||| |||| ||||| | ||||||||||||||||||||| |||||||||| |||| |||||||| ||||||||||||    
T  3695391 tgttttatacaatttttgggggataaaatactattttggtattttagacaacttgtacgtgggacaaaaggttgtgatgtggtttggtgag 3695301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 256 - 430
Target Start/End: Complemental strand, 50386617 - 50386444
Alignment:
Q  256 agaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatttt 355  Q
    ||||||| |||| |||||  |||||| |||||||||||||||  || ||||||| |||||||||||||||||||||||||| || | ||||||| |||||    
T  50386617 agaacagcacaatacaagggagaacagcacaggacaaattttt-atcacattgaataattttttgttttatacaatttttggggaacaaaatgctatttt 50386519  T
Q  356 ggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    | |||||||||||||| |||||| ||| ||||||||||| | ||||||| ||||| |||||||||| | ||||||    
T  50386518 gatattttagacaacttgtacgtaggacaaaaagttgtgctgtggtttgttgaggcacaaaaatatcaatttttg 50386444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 304 - 430
Target Start/End: Complemental strand, 54622910 - 54622784
Alignment:
Q  304 cattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggttt 403  Q
    |||||| |||||||||||||||||| ||||||| ||||  |||||| ||||||||||||||||||||| |||||||||||||||||||||| | ||||||    
T  54622910 cattgaataattttttgttttatacgatttttgggggacgaaatgctattttggtattttagacaacttgtacgtgggataaaaagttgtgttgtggttt 54622811  T
Q  404 ggtgaggaacaaaaatatgagtttttg 430  Q
     |||||  |||||||||||||||||||    
T  54622810 cgtgagcgacaaaaatatgagtttttg 54622784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 258 - 430
Target Start/End: Complemental strand, 51925367 - 51925196
Alignment:
Q  258 aacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttgg 357  Q
    ||||| |||||||||| ||||||| |||| ||||||||||  ||| |||||| |||||||||||||||||| ||||||| ||||  |||||  |||||||    
T  51925367 aacagcacaacacaaggcagaacagcacatgacaaattttt-atggcattgaataattttttgttttatacgatttttgggggacgaaatgttattttgg 51925269  T
Q  358 tattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    ||||  | |||||| |||||||||| ||||||||||| | ||||||||||||| |||||||||| ||||||||    
T  51925268 tattaaaaacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatcagtttttg 51925196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 264 - 430
Target Start/End: Original strand, 3964220 - 3964385
Alignment:
Q  264 acaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtatttt 363  Q
    |||| ||||| ||||||| |||| ||||||||||| |||| ||||| ||||||| |||||||||  ||||||| ||||  |||||| |||||||||||||    
T  3964220 acaatacaaggcagaacagcacaagacaaattttgtatgatattgaataattttatgttttatatgatttttg-gggacgaaatgctattttggtatttt 3964318  T
Q  364 agacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||||| |||| ||||| ||||||||||| | ||||||||||||| |||||||| | ||||||||    
T  3964319 agacaacttgtacatgggacaaaaagttgtgctgtggtttggtgagggacaaaaatttcagtttttg 3964385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 314 - 430
Target Start/End: Original strand, 29646047 - 29646163
Alignment:
Q  314 ttttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaac 413  Q
    ||||||||||||||| ||||||| |||| ||||||| |||||||||||||| |||||| |||||||||| ||||||||||||| ||||||||||||| ||    
T  29646047 ttttttgttttatacgatttttgggggacaaaatgctattttggtattttaaacaacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggac 29646146  T
Q  414 aaaaatatgagtttttg 430  Q
    ||||||||  |||||||    
T  29646147 aaaaatatatgtttttg 29646163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 219 - 430
Target Start/End: Original strand, 21373816 - 21374027
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaatagaacagtacaacacaagacagaacaa--cacaggacaaattttgcatgacattgagtaattt 316  Q
    |||||||||||||||||||| ||||||||||||||| |  |||  |||  |||  |||  ||||  |||||||||||||||  ||| |||||| ||||||    
T  21373816 gtgtttggtttgcaaaacagtaagtattggacagaacaatacaagacagaacagcacaacacaagacacaggacaaattttt-atggcattgaataattt 21373914  T
Q  317 tttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaa 416  Q
    ||  |||||||| |||||||   ||  |||||| ||||||||||||||||||||| |||||||||| ||||||||||| | ||||||||||||| |||||    
T  21373915 tta-ttttatacgatttttggccgaagaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaa 21374013  T
Q  417 aatatgagtttttg 430  Q
    |||||||| |||||    
T  21374014 aatatgagattttg 21374027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 301 - 430
Target Start/End: Complemental strand, 49749028 - 49748899
Alignment:
Q  301 tgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatgg 400  Q
    ||||||||| |||||||||||||||||| ||||||| ||||  |||||  |||||||||||| | |||||| |||||||||| ||||||||||| | |||    
T  49749028 tgacattgaataattttttgttttatacgatttttgggggacgaaatgttattttggtatttaaaacaacttgtacgtgggacaaaaagttgtgttgtgg 49748929  T
Q  401 tttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||||||| |||||||||| ||||||||    
T  49748928 tttggtgagggacaaaaatatcagtttttg 49748899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 305 - 430
Target Start/End: Original strand, 51296553 - 51296678
Alignment:
Q  305 attgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttg 404  Q
    |||||||||||||||||||||||| ||||||  |||| ||||||| ||||| ||||||||||||||| |||| | ||| ||||| ||||| | |||||||    
T  51296553 attgagtaattttttgttttatacgattttttggggacaaaatgctatttttgtattttagacaacttgtacttaggacaaaaaattgtgttgtggtttg 51296652  T
Q  405 gtgaggaacaaaaatatgagtttttg 430  Q
    |||||| |||||||||||||||||||    
T  51296653 gtgagggacaaaaatatgagtttttg 51296678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 269 - 394
Target Start/End: Complemental strand, 41695049 - 41694925
Alignment:
Q  269 acaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagaca 368  Q
    |||||| |||||| ||||| |||||||||  |||||||||| |||||||||||||||||| ||||||| |||| ||||||| ||||  ||||||||||||    
T  41695049 acaagaaagaacagcacagaacaaattttt-atgacattgaataattttttgttttatacgatttttgggggacaaaatgctatttcagtattttagaca 41694951  T
Q  369 actagtacgtgggataaaaagttgtg 394  Q
    ||| ||| |||||| |||||||||||    
T  41694950 acttgtatgtgggacaaaaagttgtg 41694925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 268 - 419
Target Start/End: Complemental strand, 3867798 - 3867648
Alignment:
Q  268 cacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagac 367  Q
    |||||| || ||||||||| ||||| ||||  |||  ||||| |||||| ||||||||||  ||||||| |||| ||||||| |||||||| |||||||     
T  3867798 cacaaggcataacaacacatgacaagttttt-atggtattgaataatttcttgttttatatgatttttgggggacaaaatgctattttggtgttttagaa 3867700  T
Q  368 aactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaat 419  Q
    |||| |||||| ||| ||||||||||| | ||||||||||||| ||||||||    
T  3867699 aacttgtacgtaggacaaaaagttgtgctgtggtttggtgagggacaaaaat 3867648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 219 - 350
Target Start/End: Original strand, 43175445 - 43175586
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattg 308  Q
    |||||||||||||||||||||||||| |||||| ||          |||||||||| || ||||||||||||| |||| || |||||||  |||  ||||    
T  43175445 gtgtttggtttgcaaaacagcaagtactggacaaaacagtacaagatagaacagtataatacaagacagaacagcacacgataaattttttatggtattg 43175544  T
Q  309 agtaattttttgttttatacaatttttgagggagaaaatgca 350  Q
    |||||||||||||||||||| |||||||||||| ||||||||    
T  43175545 agtaattttttgttttatacgatttttgagggacaaaatgca 43175586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 276 - 379
Target Start/End: Original strand, 10747161 - 10747264
Alignment:
Q  276 agaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaattttt-gagggagaaaatgcaattttggtattttagacaactagt 374  Q
    |||||| |||| ||||||||||  |||||||||| |||||||||||||||||| |||||| | |||| ||||||| |||||| |||||||||||||| ||    
T  10747161 agaacagcacaagacaaattttt-atgacattgaataattttttgttttatacgatttttggggggacaaaatgctattttgatattttagacaacttgt 10747259  T
Q  375 acgtg 379  Q
    |||||    
T  10747260 acgtg 10747264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 314 - 430
Target Start/End: Original strand, 50678779 - 50678895
Alignment:
Q  314 ttttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaac 413  Q
    ||||||||||||||  |||| || || |  |||| | ||||||||||||||||||||| ||||||| || ||||||||||| | ||||||||||||  ||    
T  50678779 ttttttgttttataggatttatgtggaatgaaatactattttggtattttagacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagagac 50678878  T
Q  414 aaaaatatgagtttttg 430  Q
    |||||||| ||||||||    
T  50678879 aaaaatatcagtttttg 50678895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 344 - 430
Target Start/End: Original strand, 19906773 - 19906859
Alignment:
Q  344 aaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||| |||||||| |||||||||||| ||||||| || ||||||||||| | ||||||||||||| |||||||| | ||||||||    
T  19906773 aaatgctattttggtgttttagacaacttgtacgtgagacaaaaagttgtgctgtggtttggtgagggacaaaaatttcagtttttg 19906859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 276 - 419
Target Start/End: Complemental strand, 22484884 - 22484742
Alignment:
Q  276 agaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagta 375  Q
    |||||| |||| ||||||||||  |||  ||||| ||||||| ||| ||||| |||||||| | ||  |||||| ||||| |||||||||||||||  ||    
T  22484884 agaacagcacaagacaaattttt-atggtattgaataattttctgtattatataatttttgggtgacgaaatgctatttttgtattttagacaacttata 22484786  T
Q  376 cgtgggataaaaagttgtgatatggtttggtgaggaacaaaaat 419  Q
    ||||||| ||||||||||| | | ||||||  ||||||||||||    
T  22484785 cgtgggacaaaaagttgtgttgtagtttggcaaggaacaaaaat 22484742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 344 - 430
Target Start/End: Original strand, 24721496 - 24721582
Alignment:
Q  344 aaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||| |||||||| |||||||||||| ||| |||||||||||||||||| | ||||||| ||||| || ||||| | ||||||||    
T  24721496 aaatgctattttggtgttttagacaacttgtatgtgggataaaaagttgtgttgtggtttgttgaggtaccaaaattttagtttttg 24721582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 305 - 388
Target Start/End: Original strand, 32621841 - 32621924
Alignment:
Q  305 attgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaa 388  Q
    ||||| |||||||||||| |||||||||||||| ||| || ||   ||||||||||||||||||||| |||| ||||| |||||    
T  32621841 attgaataattttttgttgtatacaatttttgatggacaacatattattttggtattttagacaacttgtacatgggacaaaaa 32621924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 311 - 415
Target Start/End: Original strand, 44267720 - 44267824
Alignment:
Q  311 taattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgagg 410  Q
    |||||||||||||||||  |||||||   ||  |||||| ||||| ||||||||||||| | ||| ||||||||||||||| || | |||||||| ||||    
T  44267720 taattttttgttttatatgatttttggatgacgaaatgctatttttgtattttagacaatttgtatgtgggataaaaagttatgttgtggtttggcgagg 44267819  T
Q  411 aacaa 415  Q
     ||||    
T  44267820 gacaa 44267824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 315 - 394
Target Start/End: Complemental strand, 45691004 - 45690925
Alignment:
Q  315 tttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtg 394  Q
    |||||||||||||| |||||||  |||  |||||| |||||||||||||||||||||  | |||| || |||||||||||    
T  45691004 tttttgttttatacgatttttggaggacgaaatgcgattttggtattttagacaacttatgcgtgagacaaaaagttgtg 45690925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 351 - 430
Target Start/End: Complemental strand, 8648624 - 8648545
Alignment:
Q  351 attttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    ||||||||||||||||||| | |||| || || ||||||||||||| | |||| || |||||||| ||| | ||||||||    
T  8648624 attttggtattttagacaatttgtacttgtgacaaaaagttgtgatgtagtttagttaggaacaagaatttcagtttttg 8648545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 351 - 402
Target Start/End: Complemental strand, 39215536 - 39215485
Alignment:
Q  351 attttggtattttagacaactagtacgtgggataaaaagttgtgatatggtt 402  Q
    ||||||||||||||||||||| |||||||||| ||||| || |||| |||||    
T  39215536 attttggtattttagacaacttgtacgtgggacaaaaaattatgatttggtt 39215485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 305 - 371
Target Start/End: Original strand, 8253646 - 8253712
Alignment:
Q  305 attgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaact 371  Q
    ||||| ||||||||  | ||||||||||||||| | | ||||||  |||||||||||||||||||||    
T  8253646 attgattaatttttaatcttatacaatttttgatgaataaaatgttattttggtattttagacaact 8253712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 300 - 430
Target Start/End: Original strand, 25954418 - 25954547
Alignment:
Q  300 atgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatg 399  Q
    |||| ||||| ||||||||| ||||||||  |||||| ||||  |||||  || || |||||||| ||||||  || ||| || ||||||||||| | |     
T  25954418 atgatattgaataattttttattttatacgctttttg-gggacgaaatgttatattagtattttaaacaacttatatgtgagacaaaaagttgtgctgta 25954516  T
Q  400 gtttggtgaggaacaaaaatatgagtttttg 430  Q
     |||||||||  |||||||||||||||||||    
T  25954517 atttggtgagagacaaaaatatgagtttttg 25954547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 300 - 392
Target Start/End: Original strand, 25395581 - 25395673
Alignment:
Q  300 atgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttg 392  Q
    |||||||||  | |||||||||||||||| ||||||   | | ||||||  |||||||||||||||||||||  ||  | |||||||||||||    
T  25395581 atgacattgcattattttttgttttatacgatttttagtgaacaaaatgttattttggtattttagacaacttatatttaggataaaaagttg 25395673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 351 - 415
Target Start/End: Complemental strand, 34351435 - 34351371
Alignment:
Q  351 attttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaa 415  Q
    |||||| |||||||||||||| ||| ||| || ||||||||||| | ||||||| ||||| ||||    
T  34351435 attttgatattttagacaacttgtatgtgcgacaaaaagttgtgttgtggtttgatgagggacaa 34351371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 130; Significance: 3e-67; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 220 - 430
Target Start/End: Original strand, 24242540 - 24242760
Alignment:
Q  220 tgtttggtttgcaaaacagcaagtattggacagaatagaaca----------gtacaacacaagacagaacaacacaggacaaattttgcatgacattga 309  Q
    ||||||||||||||||||||||||| ||||||||| || |||          |||||||||||| ||||||| |||||||||||||||  ||||||||||    
T  24242540 tgtttggtttgcaaaacagcaagtactggacagaacagtacaagataaaagagtacaacacaaggcagaacagcacaggacaaattttttatgacattga 24242639  T
Q  310 gtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgag 409  Q
    ||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||    
T  24242640 gtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgatgtggtttggtgag 24242739  T
Q  410 gaacaaaaatatgagtttttg 430  Q
    | |||||||||||||||||||    
T  24242740 ggacaaaaatatgagtttttg 24242760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 221 - 429
Target Start/End: Original strand, 17867712 - 17867930
Alignment:
Q  221 gtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgag 310  Q
    |||||||||||||||||||||||| |||||||||          ||||||||||||||||||| |||||||||||||||||||||||  ||| |||||||    
T  17867712 gtttggtttgcaaaacagcaagtactggacagaacagtacaacatagaacagtacaacacaaggcagaacaacacaggacaaattttttatggcattgag 17867811  T
Q  311 taattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgagg 410  Q
    |||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||| | |||||||||| ||||||||||| | ||||||| |||||    
T  17867812 taattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaatttgtacgtgggacaaaaagttgtgctgtggtttgatgagg 17867911  T
Q  411 aacaaaaatatgagttttt 429  Q
     ||||||||||||||||||    
T  17867912 gacaaaaatatgagttttt 17867930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 221 - 429
Target Start/End: Original strand, 17877495 - 17877713
Alignment:
Q  221 gtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgag 310  Q
    |||||||||||||||||||||||| |||||||||          ||||||||||||||||||| |||||||||||||||||||||||  ||| |||||||    
T  17877495 gtttggtttgcaaaacagcaagtactggacagaacagtacaacatagaacagtacaacacaaggcagaacaacacaggacaaattttttatggcattgag 17877594  T
Q  311 taattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgagg 410  Q
    |||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||| | |||||||||| ||||||||||| | ||||||| |||||    
T  17877595 taattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaatttgtacgtgggacaaaaagttgtgctgtggtttgatgagg 17877694  T
Q  411 aacaaaaatatgagttttt 429  Q
     ||||||||||||||||||    
T  17877695 gacaaaaatatgagttttt 17877713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 219 - 430
Target Start/End: Original strand, 24203238 - 24203458
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattg 308  Q
    ||||||||||||||||||||||||||||||||||||          ||||||||||||||||||| || |||| |||||||||||||||  ||| |||||    
T  24203238 gtgtttggtttgcaaaacagcaagtattggacagaacagtacatgatagaacagtacaacacaaggcaaaacagcacaggacaaattttttatggcattg 24203337  T
Q  309 agtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtga 408  Q
    |||||||||||||||||||||||||| |||||| ||||||  ||||||||||||||||||||| |||||||||| ||||||||||| | |||||||||||    
T  24203338 agtaattttttgttttatacaatttt-gagggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtga 24203436  T
Q  409 ggaacaaaaatatgagtttttg 430  Q
    || |||||||||||||||||||    
T  24203437 gggacaaaaatatgagtttttg 24203458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 254 - 430
Target Start/End: Original strand, 2614816 - 2614992
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatt 353  Q
    |||||||||||||||||||| |||||||||||| ||||||||||  ||| |||||||||||||||| |||||||| |||||||||||| ||||||| |||    
T  2614816 atagaacagtacaacacaaggcagaacaacacatgacaaattttttatggcattgagtaattttttattttatacgatttttgagggacaaaatgctatt 2614915  T
Q  354 ttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||||||||||||||| |||||||||| ||||||||||| | ||||||||||||| |||||||||||||||||||    
T  2614916 ttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttg 2614992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 219 - 430
Target Start/End: Original strand, 3259553 - 3259779
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggaca-----aattttgcatga 303  Q
    |||||||||||||||||||||||| |||||||||||          ||||||||||||||||||| |||||||||||| ||||     ||||||  |||     
T  3259553 gtgtttggtttgcaaaacagcaaggattggacagaacagtacaagatagaacagtacaacacaaggcagaacaacacatgacatgacaaattttttatgg 3259652  T
Q  304 cattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggttt 403  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||| | ||||||    
T  3259653 cattgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggataaaaagttgtgttgtggttt 3259752  T
Q  404 ggtgaggaacaaaaatatgagtttttg 430  Q
    ||||||| |||||||||||||||||||    
T  3259753 ggtgagggacaaaaatatgagtttttg 3259779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 219 - 430
Target Start/End: Complemental strand, 11614030 - 11613824
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaatagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttt 318  Q
    ||||||||||||||||||||||||||||||||||||     |||||||  | |  |||| |||||||||||||||||||  ||| |||||||||||||||    
T  11614030 gtgtttggtttgcaaaacagcaagtattggacagaa-----cagtacacgatagaacagtacaacacaggacaaattttttatggcattgagtaattttt 11613936  T
Q  319 tgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaa 418  Q
    |||||||||| |||||||||||| ||||||| |||||||||||||| |||||| |||||||||| ||||||||||| | ||||||||||||| |||||||    
T  11613935 tgttttatacgatttttgagggacaaaatgctattttggtattttatacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaa 11613836  T
Q  419 tatgagtttttg 430  Q
    ||||||||||||    
T  11613835 tatgagtttttg 11613824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 254 - 430
Target Start/End: Complemental strand, 3933016 - 3932840
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatt 353  Q
    ||||||||||||||||||||||| |||| |||||||||||||||  ||| |||||| |||||||||||||||||| |||||||||||| ||||||  |||    
T  3933016 atagaacagtacaacacaagacaaaacagcacaggacaaattttttatggcattgaataattttttgttttatacgatttttgagggacaaaatgttatt 3932917  T
Q  354 ttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||  |||||||||||||||||||    
T  3932916 ttggtattttagacaacttgtacgtgggacaaaaagttgtgatgtggtttggtgagagacaaaaatatgagtttttg 3932840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 221 - 430
Target Start/End: Original strand, 34176722 - 34176926
Alignment:
Q  221 gtttggtttgcaaaacagcaagtattggacagaatagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttg 320  Q
    |||||||||||||||| | ||||| |||||||||     |||||||||| ||||||||||| |||||||||||||||  ||| |||||||||||||||||    
T  34176722 gtttggtttgcaaaacggtaagtactggacagaa-----cagtacaacataagacagaacagcacaggacaaattttttatggcattgagtaattttttg 34176816  T
Q  321 ttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaata 420  Q
    |||||||| |||||||||||| ||||||| ||||||||||||||||| ||| |||||||||| ||||||||||| | || |||||||||  |||||||||    
T  34176817 ttttatacgatttttgagggacaaaatgctattttggtattttagactacttgtacgtgggacaaaaagttgtgctgtgatttggtgagagacaaaaata 34176916  T
Q  421 tgagtttttg 430  Q
    ||||||||||    
T  34176917 tgagtttttg 34176926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 254 - 430
Target Start/End: Complemental strand, 32410061 - 32409885
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatt 353  Q
    |||||||||||||||||||| ||||||| |||| ||||||||||  |||||||||| |||||||||||||||||| |||||||||||| ||||| | |||    
T  32410061 atagaacagtacaacacaaggcagaacagcacatgacaaattttttatgacattgaataattttttgttttatacgatttttgagggacaaaatactatt 32409962  T
Q  354 ttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||||||||||||||| ||  |||||| ||||||||||||| ||||||||||||| |||||||||||||||||||    
T  32409961 ttggtattttagacaacttgtgagtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttg 32409885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 256 - 430
Target Start/End: Complemental strand, 167130 - 166956
Alignment:
Q  256 agaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatttt 355  Q
    |||||||||||||||||| ||||||| |||| ||||||||||  ||||||||||||||||||||||||||||  |||||| |||||  |||||| |||||    
T  167130 agaacagtacaacacaaggcagaacagcacatgacaaattttttatgacattgagtaattttttgttttatatgatttttaagggacgaaatgctatttt 167031  T
Q  356 ggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||||||||||||| |||||||||| ||||||||||| | ||||||||||||| |||||||||||||||||||    
T  167030 ggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttg 166956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 219 - 430
Target Start/End: Complemental strand, 15277191 - 15276970
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattg 308  Q
    |||||||||||||||||||||||||| |||||||||          ||||||||||||||| ||| |||||||||||| ||||||  ||  ||| |||||    
T  15277191 gtgtttggtttgcaaaacagcaagtactggacagaacagtacaagatagaacagtacaacataaggcagaacaacacatgacaaaaattttatggcattg 15277092  T
Q  309 agtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtga 408  Q
    |||||||||||||||||||  |||||||||||| ||||||| |||||| | |||||||||||| |||||||||| ||||||||||||| |||||||||||    
T  15277091 agtaattttttgttttataagatttttgagggacaaaatgctattttgttcttttagacaacttgtacgtgggaaaaaaagttgtgatgtggtttggtga 15276992  T
Q  409 ggaacaaaaatatgagtttttg 430  Q
    || |||||||||||||||||||    
T  15276991 gggacaaaaatatgagtttttg 15276970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 254 - 430
Target Start/End: Complemental strand, 32132589 - 32132413
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatt 353  Q
    |||||||||||||||||||| ||||||| |||||||||||||||  ||| ||||||||||||| ||||||||||| ||||||| |||| ||||||| |||    
T  32132589 atagaacagtacaacacaaggcagaacagcacaggacaaattttttatggcattgagtaatttgttgttttatacgatttttgggggacaaaatgctatt 32132490  T
Q  354 ttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    ||| |||||||||||||| |||||||||| ||||||||||| | ||| ||||||||| |||||||||||||||||||    
T  32132489 ttgatattttagacaacttgtacgtgggacaaaaagttgtgttgtggattggtgagggacaaaaatatgagtttttg 32132413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 254 - 430
Target Start/End: Complemental strand, 15277489 - 15277313
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatt 353  Q
    ||||||||||||||||||||  | |||||||||| |||||||||  ||  ||||||||||||| ||||||||||| |||||||   || ||||||| |||    
T  15277489 atagaacagtacaacacaaggtaaaacaacacagaacaaattttttatagcattgagtaatttgttgttttatacgatttttggaagacaaaatgctatt 15277390  T
Q  354 ttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  15277389 ttggtattttagacaacttgtacgtgggataaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttg 15277313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 219 - 430
Target Start/End: Original strand, 11212132 - 11212353
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattg 308  Q
    ||||||||||||||||||||||||||||||||||||          ||||||||||||||||||| ||||||| |||||||||||| ||  ||| | |||    
T  11212132 gtgtttggtttgcaaaacagcaagtattggacagaacagtacaagatagaacagtacaacacaaggcagaacagcacaggacaaatgttttatggccttg 11212231  T
Q  309 agtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtga 408  Q
    |||||||||||||||||| | |||||||||||| ||||||  ||||||||||||||||||||| | ||||| || |||| ||| || | |||||||||||    
T  11212232 agtaattttttgttttattcgatttttgagggacaaaatgttattttggtattttagacaacttgcacgtgagacaaaaggttatgttgtggtttggtga 11212331  T
Q  409 ggaacaaaaatatgagtttttg 430  Q
    || |||||| ||||||||||||    
T  11212332 gggacaaaagtatgagtttttg 11212353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 254 - 430
Target Start/End: Complemental strand, 10324320 - 10324144
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatt 353  Q
    |||||||| |||||||||||  |||||| ||||| |||||||||  |||  |||||||||||||||||||||||| ||||||  |||| ||||||  |||    
T  10324320 atagaacattacaacacaaggtagaacagcacagaacaaattttttatgggattgagtaattttttgttttatacgattttttggggacaaaatgttatt 10324221  T
Q  354 ttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||||||||||||||| ||||||| || ||||||||||| | ||||||||||||| |||||||||||||||||||    
T  10324220 ttggtattttagacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttg 10324144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 219 - 430
Target Start/End: Original strand, 17443138 - 17443358
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattg 308  Q
    ||||||||||||||||||||||| ||||||||||||          |||||||  |||||||||| || |||| |||||||||||||| | |||||||||    
T  17443138 gtgtttggtttgcaaaacagcaaatattggacagaacagtacaagatagaacaacacaacacaaggcataacagcacaggacaaattt-gtatgacattg 17443236  T
Q  309 agtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtga 408  Q
    | ||||||| |||||||||| |||||||  |||  |||||| ||||||||||||||||||||| |||||||||| ||||||||||  | |||||||||||    
T  17443237 aataattttatgttttatacgatttttggaggacgaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtactgtggtttggtga 17443336  T
Q  409 ggaacaaaaatatgagtttttg 430  Q
    || | |||||||||||||||||    
T  17443337 gggataaaaatatgagtttttg 17443358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 220 - 430
Target Start/End: Original strand, 18057396 - 18057615
Alignment:
Q  220 tgtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattga 309  Q
    ||||||||||||||||||| |||||||||| ||||          |||||||| |||||||||| || || | |||||||||||||| | ||||||||||    
T  18057396 tgtttggtttgcaaaacagtaagtattggatagaacagtaaaagatagaacagcacaacacaaggcataatagcacaggacaaattt-gtatgacattga 18057494  T
Q  310 gtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgag 409  Q
     ||||||| |||||||||| ||||||   |||  |||||| ||||||||||||||||||||| |||||||||| ||||||||||  | ||||||||||||    
T  18057495 ataattttatgttttatacgatttttagaggacgaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtactgtggtttggtgag 18057594  T
Q  410 gaacaaaaatatgagtttttg 430  Q
    | |||||||||||||||||||    
T  18057595 ggacaaaaatatgagtttttg 18057615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 278 - 430
Target Start/End: Original strand, 10485102 - 10485253
Alignment:
Q  278 aacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacg 377  Q
    ||||||||||||||||| ||  |||||||||| |||||||||||||||||| ||||||| |||| ||||||| |||||| |||||||||||||| |||||    
T  10485102 aacaacacaggacaaatattt-atgacattgaataattttttgttttatacgatttttgggggacaaaatgctattttgatattttagacaacttgtacg 10485200  T
Q  378 tgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    ||||| ||||||||||| | ||||||| ||||| |||||||||| ||||||||    
T  10485201 tgggacaaaaagttgtgctgtggtttgctgagggacaaaaatatcagtttttg 10485253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 306 - 430
Target Start/End: Original strand, 11279100 - 11279224
Alignment:
Q  306 ttgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttgg 405  Q
    ||||||||||||||||||||| | |||||||||||| ||||||| ||||||||||||||||||||| ||||||| || ||||||||||| | ||||||||    
T  11279100 ttgagtaattttttgttttattcgatttttgagggataaaatgctattttggtattttagacaacttgtacgtgagacaaaaagttgtgttgtggtttgg 11279199  T
Q  406 tgaggaacaaaaatatgagtttttg 430  Q
    ||||| |||||||||||||||||||    
T  11279200 tgagggacaaaaatatgagtttttg 11279224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 268 - 430
Target Start/End: Original strand, 10959935 - 10960096
Alignment:
Q  268 cacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagac 367  Q
    |||||| |||||||||||| ||||||||||  ||| |||||| | || ||||||||||||| ||||||| |||| ||||||| ||||| |||||||||||    
T  10959935 cacaaggcagaacaacacatgacaaattttt-atggcattgaatgatattttgttttatacgatttttgggggacaaaatgctatttttgtattttagac 10960033  T
Q  368 aactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||| |||||||||| ||||||||||| | ||||||| ||||| |||||||||||||||||||    
T  10960034 aacttgtacgtgggacaaaaagttgtgttgtggtttgttgagggacaaaaatatgagtttttg 10960096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 254 - 430
Target Start/End: Complemental strand, 14925664 - 14925489
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatt 353  Q
    ||||||||  |||||||||| || |||| |||||||||||||| | |||||||||| ||||||| |||||||||| ||||||  ||||   ||||| |||    
T  14925664 atagaacaacacaacacaaggcataacagcacaggacaaattt-gtatgacattgaataattttatgttttatacgatttttaggggacggaatgctatt 14925566  T
Q  354 ttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||||||||||||||| ||| |||||| ||||||||||  | ||||||||||||| |||||||||||||||||||    
T  14925565 ttggtattttagacaacttgtaagtgggacaaaaagttgtactgtggtttggtgagggacaaaaatatgagtttttg 14925489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 311 - 430
Target Start/End: Original strand, 11382041 - 11382158
Alignment:
Q  311 taattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgagg 410  Q
    |||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||| ||||||| || ||||||||||| | ||||||||||||     
T  11382041 taattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgag- 11382139  T
Q  411 aacaaaaatatgagtttttg 430  Q
     |||||||||||||||||||    
T  11382140 -acaaaaatatgagtttttg 11382158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 300 - 430
Target Start/End: Original strand, 3290638 - 3290766
Alignment:
Q  300 atgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatg 399  Q
    |||||||||| ||||| |||||||||||  |||||||||||| ||||||| |||||||||||||||||||||  ||||||||  ||||||||||| | ||    
T  3290638 atgacattgaataattgtttgttttatatgatttttgagggacaaaatgctattttggtattttagacaacttatacgtggg--aaaaagttgtgttgtg 3290735  T
Q  400 gtttggtgaggaacaaaaatatgagtttttg 430  Q
    ||||||| ||| |||||||||||||||||||    
T  3290736 gtttggtaagggacaaaaatatgagtttttg 3290766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 276 - 430
Target Start/End: Complemental strand, 31870286 - 31870133
Alignment:
Q  276 agaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagta 375  Q
    ||||||||||| ||||||||||  ||| |||||| |||||||||||||||||| | ||||| ||||  |||||| ||||| ||||||||||||||   ||    
T  31870286 agaacaacacatgacaaattttt-atggcattgaataattttttgttttatacgagttttgggggacgaaatgctatttttgtattttagacaacctata 31870188  T
Q  376 cgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    ||||||| ||||||||||| | ||||||||||||| |||||||||| ||||||||    
T  31870187 cgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatcagtttttg 31870133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 300 - 419
Target Start/End: Complemental strand, 34684147 - 34684027
Alignment:
Q  300 atgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggta-ttttagacaactagtacgtgggataaaaagttgtgatat 398  Q
    |||||| |||||||||||||||||||||| |||||||  ||| ||||||| ||||||||| |||||||||||| |||||||| | ||||||||||| | |    
T  34684147 atgacaatgagtaattttttgttttatacgatttttggaggacaaaatgctattttggtatttttagacaacttgtacgtggaacaaaaagttgtgttgt 34684048  T
Q  399 ggtttggtgaggaacaaaaat 419  Q
    |||||||||||| ||||||||    
T  34684047 ggtttggtgagggacaaaaat 34684027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 219 - 348
Target Start/End: Original strand, 29814740 - 29814879
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattg 308  Q
    |||||||||||||||||||| ||||| |||||||||          ||||||||||||||||||| |||||||||||||||||| ||||  ||| |||||    
T  29814740 gtgtttggtttgcaaaacagtaagtactggacagaacagtacaagatagaacagtacaacacaaggcagaacaacacaggacaatttttttatggcattg 29814839  T
Q  309 agtaattttttgttttatacaatttttgagggagaaaatg 348  Q
    |||||| ||||||||||||| ||||||| |||| ||||||    
T  29814840 agtaatgttttgttttatacgatttttgggggacaaaatg 29814879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 314 - 430
Target Start/End: Complemental strand, 11675523 - 11675407
Alignment:
Q  314 ttttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaac 413  Q
    ||||||||||||||| ||||||| ||||  | |||| |||| ||||||||| | | || |||||||||||||||||||||| ||||||||||||||  ||    
T  11675523 ttttttgttttatacgatttttgggggacgagatgccatttaggtattttacaaagcttgtacgtgggataaaaagttgtgttatggtttggtgagagac 11675424  T
Q  414 aaaaatatgagtttttg 430  Q
    |||||||| ||||||||    
T  11675423 aaaaatatcagtttttg 11675407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 219 - 348
Target Start/End: Original strand, 28502334 - 28502474
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgca-tgacatt 307  Q
    |||||||||||||||||||| ||||| |||||||||          ||||||||||||||||||| |||||||||||||||||| ||||  | || ||||    
T  28502334 gtgtttggtttgcaaaacagtaagtactggacagaacagtacaagatagaacagtacaacacaaggcagaacaacacaggacaatttttttattggcatt 28502433  T
Q  308 gagtaattttttgttttatacaatttttgagggagaaaatg 348  Q
    ||||||| ||||||||||||| ||||||| |||| ||||||    
T  28502434 gagtaatgttttgttttatacgatttttgggggacaaaatg 28502474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 314 - 430
Target Start/End: Original strand, 3379690 - 3379806
Alignment:
Q  314 ttttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaac 413  Q
    ||||||||||||||  |||||||  |||  |||||| |||||||||||| |||||||| ||| ||| || ||||||||||| ||||||||||||||  ||    
T  3379690 ttttttgttttatatgatttttggaggacgaaatgctattttggtatttaagacaacttgtatgtgagacaaaaagttgtgctatggtttggtgagcgac 3379789  T
Q  414 aaaaatatgagtttttg 430  Q
    |||||||| ||||||||    
T  3379790 aaaaatatcagtttttg 3379806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 249 - 429
Target Start/End: Complemental strand, 4494312 - 4494149
Alignment:
Q  249 acagaatagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatg 348  Q
    |||| ||||||||| |||||| ||| |||||||||||||||||||||||  ||| || ||||||||||||||                 |||| ||||||    
T  4494312 acaggatagaacagcacaacataaggcagaacaacacaggacaaattttttatggcaatgagtaattttttg-----------------gggacaaaatg 4494230  T
Q  349 caattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagttttt 429  Q
      |||| |||||||||||||||| |||||||||| ||||||||||  | ||||||||||||| ||||||||||||||||||    
T  4494229 ttatttcggtattttagacaacttgtacgtgggacaaaaagttgtactgtggtttggtgagggacaaaaatatgagttttt 4494149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 314 - 421
Target Start/End: Complemental strand, 8178030 - 8177923
Alignment:
Q  314 ttttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaac 413  Q
    ||||||||||||||  ||||||| ||||  |||||  ||||||||||||||||||||| | |||||||| ||||||||||| | ||||||||| ||| ||    
T  8178030 ttttttgttttatatgatttttgggggacgaaatgttattttggtattttagacaacttgaacgtgggacaaaaagttgtgttgtggtttggtaagggac 8177931  T
Q  414 aaaaatat 421  Q
    ||||||||    
T  8177930 aaaaatat 8177923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 315 - 430
Target Start/End: Complemental strand, 9902806 - 9902691
Alignment:
Q  315 tttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaaca 414  Q
    |||||| ||||||  ||||||| ||||  |||||  ||||||||||||||||||||| |||||||||| ||||||||||| | ||||||  ||||| |||    
T  9902806 tttttggtttatatgatttttgggggacgaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttaatgagggaca 9902707  T
Q  415 aaaatatgagtttttg 430  Q
    ||||||| ||||||||    
T  9902706 aaaatatcagtttttg 9902691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 283 - 421
Target Start/End: Complemental strand, 14808179 - 14808043
Alignment:
Q  283 cacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtggga 382  Q
    |||||||||||||||  |||  ||||| |||||||| ||||||||| ||||||| ||||  |||||  ||||||||| || |||||||   |||||||||    
T  14808179 cacaggacaaattttt-atggaattgaataatttttagttttatacgatttttgggggatgaaatgttattttggtactt-agacaacctatacgtggga 14808082  T
Q  383 taaaaagttgtgatatggtttggtgaggaacaaaaatat 421  Q
     ||||||||||| | ||||||||||||| ||||||||||    
T  14808081 caaaaagttgtgttgtggtttggtgagggacaaaaatat 14808043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 305 - 419
Target Start/End: Complemental strand, 18597316 - 18597202
Alignment:
Q  305 attgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttg 404  Q
    ||||| |||||||||||||||||  ||||||||||||  || | | ||||| |  ||||||||||||  ||||||||| ||||||||||| | |||||||    
T  18597316 attgaataattttttgttttatatgatttttgagggacgaagtactattttagcgttttagacaacttatacgtgggacaaaaagttgtgttgtggtttg 18597217  T
Q  405 gtgaggaacaaaaat 419  Q
    |||||| ||||||||    
T  18597216 gtgagggacaaaaat 18597202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 304 - 429
Target Start/End: Original strand, 23636193 - 23636318
Alignment:
Q  304 cattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggttt 403  Q
    |||||| |||||||||||||||||||||||| | ||||  |||||| |||||||  ||||| | |||| ||||||| || ||||| ||||| | ||||||    
T  23636193 cattgaataattttttgttttatacaattttggggggacgaaatgctattttggatttttaaataacttgtacgtgagacaaaaatttgtgttgtggttt 23636292  T
Q  404 ggtgaggaacaaaaatatgagttttt 429  Q
      |||  |||||||||||||||||||    
T  23636293 aatgaataacaaaaatatgagttttt 23636318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 264 - 419
Target Start/End: Original strand, 29054289 - 29054441
Alignment:
Q  264 acaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtatttt 363  Q
    |||||| ||||||||||| |||| || |||||||  |||  ||||| ||||||| ||| |||||  ||||||| | ||  |||||  |||||| ||||||    
T  29054289 acaacataagacagaacagcacaagataaatttt--atggtattgaataattttctgtattatatgatttttgggtgacgaaatgttattttg-tatttt 29054385  T
Q  364 agacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaat 419  Q
    |||||||| ||||||| || ||||||||||| | |||||||| |||| ||||||||    
T  29054386 agacaacttgtacgtgagacaaaaagttgtgctgtggtttggcgagggacaaaaat 29054441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 394
Target Start/End: Complemental strand, 35004326 - 35004197
Alignment:
Q  264 acaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtatttt 363  Q
    |||| ||||| ||||||||||||  ||||| |||  |||| ||||| || ||||| || ||||||||||||| |  || ||||  | |||||| ||||||    
T  35004326 acaatacaaggcagaacaacacataacaaactttt-atgatattgaatagtttttggtattatacaattttttattgacaaaaatctattttgatatttt 35004228  T
Q  364 agacaactagtacgtgggataaaaagttgtg 394  Q
    ||| |||| |||||||||| ||| |||||||    
T  35004227 agaaaacttgtacgtgggacaaagagttgtg 35004197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 297
Target Start/End: Original strand, 32805353 - 32805441
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacaga----------atagaacagtacaacacaagacagaacaacacaggacaaatttt 297  Q
    |||||||||||||||||||||||||| |||||| |          |||||||| ||||||||||| ||||||| |||| ||||||||||    
T  32805353 gtgtttggtttgcaaaacagcaagtactggacataacagtacaagatagaacaatacaacacaaggcagaacagcacatgacaaatttt 32805441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 305 - 393
Target Start/End: Complemental strand, 16542433 - 16542345
Alignment:
Q  305 attgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgt 393  Q
    ||||| ||||||||| | ||||||||||||||  | | |||| |  ||||||||||||||||||||| |||| ||  ||||||| ||||    
T  16542433 attgaataattttttatcttatacaatttttgttgcataaaaggttattttggtattttagacaacttgtacttgaaataaaaatttgt 16542345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 305 - 401
Target Start/End: Complemental strand, 27824808 - 27824712
Alignment:
Q  305 attgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggt 401  Q
    ||||| ||||||||  | |||||  |||||||  ||| |||| || ||||| ||||||| || |||| |||||||||| ||||||||||||| ||||    
T  27824808 attgaataatttttgatcttatatgatttttgttggacaaaaagctatttttgtattttggataactcgtacgtgggacaaaaagttgtgatgtggt 27824712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 219 - 251
Target Start/End: Complemental strand, 34684239 - 34684207
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggaca 251  Q
    |||||||||||||||||||| ||||||||||||    
T  34684239 gtgtttggtttgcaaaacagtaagtattggaca 34684207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 128; Significance: 5e-66; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 219 - 430
Target Start/End: Original strand, 40753049 - 40753255
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaatagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttt 318  Q
    |||||||||||||||||||| ||||| |||||||||     |||||||||||||  |||||||||||||||||||||||  ||| |||||||||||||||    
T  40753049 gtgtttggtttgcaaaacagtaagtactggacagaa-----cagtacaacacaaagcagaacaacacaggacaaattttttatggcattgagtaattttt 40753143  T
Q  319 tgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaa 418  Q
    |||||||||| |||||||||||| ||||||| ||||||||||||||||||||| |||||||||| ||||||||||| | || |||||||||| |||||||    
T  40753144 tgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtgatttggtgagggacaaaaa 40753243  T
Q  419 tatgagtttttg 430  Q
    ||||||||||||    
T  40753244 tatgagtttttg 40753255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 221 - 428
Target Start/End: Original strand, 18386406 - 18386623
Alignment:
Q  221 gtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgag 310  Q
    ||||||||||||||||||||||||||||||| ||          ||||||| ||||||||||| |||||||||||| ||||||||||  |||||||||||    
T  18386406 gtttggtttgcaaaacagcaagtattggacaaaacggtacaaaatagaacaatacaacacaaggcagaacaacacatgacaaattttttatgacattgag 18386505  T
Q  311 taattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgagg 410  Q
    |||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||| |||||||||| ||||||||||| | |||||||||||||    
T  18386506 taattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagg 18386605  T
Q  411 aacaaaaatatgagtttt 428  Q
     |||||||||||||||||    
T  18386606 gacaaaaatatgagtttt 18386623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 219 - 430
Target Start/End: Original strand, 46633576 - 46633797
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaatag----------aacagtacaacacaagacagaacaacacaggacaaattttgcatgacattg 308  Q
    ||||||||||||||||||||||||||||||||| |||||          |||||||||||||||| |||||||||||| ||||||||||  ||| |||||    
T  46633576 gtgtttggtttgcaaaacagcaagtattggacataatagtacaagatagaacagtacaacacaaggcagaacaacacaagacaaattttttatggcattg 46633675  T
Q  309 agtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtga 408  Q
    |||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||| |||||||||| ||||||||||| | |||||||||||    
T  46633676 agtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtga 46633775  T
Q  409 ggaacaaaaatatgagtttttg 430  Q
    || | |||||||||||||||||    
T  46633776 gggataaaaatatgagtttttg 46633797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 219 - 430
Target Start/End: Complemental strand, 3922919 - 3922698
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattg 308  Q
    |||||||||||||||||||||||||| |||||||||          |||| |||||||||||||| ||||||| |||||||||||||||  ||| |||||    
T  3922919 gtgtttggtttgcaaaacagcaagtactggacagaacagtacaagatagaccagtacaacacaaggcagaacagcacaggacaaattttttatggcattg 3922820  T
Q  309 agtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtga 408  Q
    |||| ||||||||||||||| |||||||||||| ||||||| |||||||||||||||| |||| |||||||||| ||||||||||| | |||||||||||    
T  3922819 agtatttttttgttttatacgatttttgagggacaaaatgctattttggtattttagataacttgtacgtgggacaaaaagttgtgctgtggtttggtga 3922720  T
Q  409 ggaacaaaaatatgagtttttg 430  Q
    ||||||||||||||||||||||    
T  3922719 ggaacaaaaatatgagtttttg 3922698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 254 - 430
Target Start/End: Original strand, 47953114 - 47953290
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatt 353  Q
    |||||||||||||||||||| ||||||| |||| ||||||||||  ||| ||||||||||||||||||||||||| |||||||||||| ||||||| |||    
T  47953114 atagaacagtacaacacaaggcagaacagcacatgacaaattttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgctatt 47953213  T
Q  354 ttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||||||||||||||| |||||||||| ||||||||||| | ||||||||||||| |||||||||||||||||||    
T  47953214 ttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttg 47953290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 219 - 430
Target Start/End: Complemental strand, 11322101 - 11321880
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattg 308  Q
    |||||||||||||||||||| |||||| ||||||||          ||||||||||||||||||| |||||||  ||| ||||||||||  ||| |||||    
T  11322101 gtgtttggtttgcaaaacagtaagtatcggacagaacagtacaagatagaacagtacaacacaaggcagaacagtacatgacaaattttttatggcattg 11322002  T
Q  309 agtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtga 408  Q
    |||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||| |||||||||| ||||||||||| | |||||||||||    
T  11322001 agtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtga 11321902  T
Q  409 ggaacaaaaatatgagtttttg 430  Q
    || |||||||||||||||||||    
T  11321901 gggacaaaaatatgagtttttg 11321880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 219 - 430
Target Start/End: Complemental strand, 26994441 - 26994220
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattg 308  Q
    |||||||||||||||||||| ||||| |||||||||          ||||||||||||||||||| ||||||| |||||||||||||||  ||| |||||    
T  26994441 gtgtttggtttgcaaaacagaaagtactggacagaacaggacaagatagaacagtacaacacaaggcagaacagcacaggacaaattttttatggcattg 26994342  T
Q  309 agtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtga 408  Q
    |||||||||||||||||||| |||||| ||||| ||||||| ||||||||||||||||||||| |||||||||| ||||||||||| | |||||||||||    
T  26994341 agtaattttttgttttatacgattttttagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtga 26994242  T
Q  409 ggaacaaaaatatgagtttttg 430  Q
    || ||||||||||||| |||||    
T  26994241 gggacaaaaatatgagattttg 26994220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 219 - 430
Target Start/End: Complemental strand, 32873985 - 32873764
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattg 308  Q
    |||||||||||||||||||||||||| |||||||||          ||||||||||||||||||| |||||||||||| ||||||||||  ||| |||||    
T  32873985 gtgtttggtttgcaaaacagcaagtactggacagaacagtacaagatagaacagtacaacacaaggcagaacaacacatgacaaattttttatggcattg 32873886  T
Q  309 agtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtga 408  Q
    |||||||||||||||||||| |||||||||||| ||||||| |||||||||||| |||||||| ||||||| || ||||||||||| | |||||||||||    
T  32873885 agtaattttttgttttatacgatttttgagggacaaaatgctattttggtatttcagacaacttgtacgtgagacaaaaagttgtgttgtggtttggtga 32873786  T
Q  409 ggaacaaaaatatgagtttttg 430  Q
     | |||||||||||||||||||    
T  32873785 aggacaaaaatatgagtttttg 32873764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 219 - 430
Target Start/End: Complemental strand, 36769785 - 36769564
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattg 308  Q
    |||||||||||||||||||| ||||| |||||||||          ||||||||||||||||||| ||||||| |||| ||||||||||  ||| |||||    
T  36769785 gtgtttggtttgcaaaacagtaagtactggacagaacagtacaagatagaacagtacaacacaaggcagaacagcacatgacaaattttttatggcattg 36769686  T
Q  309 agtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtga 408  Q
    |||||||||||||||||||| ||||||||| || ||||||| ||||||||||||||||||||| |||||||||| ||||||||||| | |||||||||||    
T  36769685 agtaattttttgttttatacgatttttgagagacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtga 36769586  T
Q  409 ggaacaaaaatatgagtttttg 430  Q
    || |||||||||||||||||||    
T  36769585 gggacaaaaatatgagtttttg 36769564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 219 - 430
Target Start/End: Complemental strand, 10932773 - 10932552
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattg 308  Q
    |||||||||||||||||||| ||||| |||||||||          ||||||||||||||||| | ||||||| || ||||||||||||  ||| |||||    
T  10932773 gtgtttggtttgcaaaacagtaagtactggacagaacagtacaagatagaacagtacaacacacggcagaacagcataggacaaattttttatggcattg 10932674  T
Q  309 agtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtga 408  Q
    |||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||| |||||||||| ||||||||||| | | |||||||||    
T  10932673 agtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtagtttggtga 10932574  T
Q  409 ggaacaaaaatatgagtttttg 430  Q
    || |||||||||||||||||||    
T  10932573 gggacaaaaatatgagtttttg 10932552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 218 - 430
Target Start/End: Complemental strand, 41211418 - 41211195
Alignment:
Q  218 cgtgtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacatt 307  Q
    ||||||||||||||||||||||||||| |||||| ||          ||||||| ||||||||||| |||||||||| ||||||||||||  ||| ||||    
T  41211418 cgtgtttggtttgcaaaacagcaagtactggacaaaacagtacaagatagaacaatacaacacaaggcagaacaacataggacaaattttttatggcatt 41211319  T
Q  308 gagtaattttttgttttatacaatttttgagggagaaaa-tgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggt 406  Q
    ||||||||||||||||||||| |||||| ||||| |||| ||| ||||||||||||||||||||| |||||||||| ||||||||||| | |||||||||    
T  41211318 gagtaattttttgttttatacgattttttagggataaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggt 41211219  T
Q  407 gaggaacaaaaatatgagtttttg 430  Q
    |||| |||||||||||||||||||    
T  41211218 gagggacaaaaatatgagtttttg 41211195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 254 - 430
Target Start/End: Complemental strand, 43158857 - 43158681
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatt 353  Q
    ||||||||||||||||||||||||||||  ||||||||||||||  ||| ||||||||||||||||||||||||| |||||||||||| ||||||| |||    
T  43158857 atagaacagtacaacacaagacagaacagtacaggacaaattttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgctatt 43158758  T
Q  354 ttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    ||| | |||||||||||| |||||||||| ||||||||||| | ||||||||| ||| |||||||||||||||||||    
T  43158757 ttgatgttttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtaagggacaaaaatatgagtttttg 43158681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 219 - 430
Target Start/End: Original strand, 18470563 - 18470784
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattg 308  Q
    |||||||||||||||||||||||||| |||||||||          ||||||||||||||||||| ||||||| |||| ||||||||||  ||| |||||    
T  18470563 gtgtttggtttgcaaaacagcaagtactggacagaacagtacaagatagaacagtacaacacaaggcagaacagcacatgacaaattttttatggcattg 18470662  T
Q  309 agtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtga 408  Q
    |||||||||||||||||||  |||||||||||| ||||||  ||||||||||||||||||||| |||||||||| |||||||| || | |||||||||||    
T  18470663 agtaattttttgttttatatgatttttgagggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttatgctgtggtttggtga 18470762  T
Q  409 ggaacaaaaatatgagtttttg 430  Q
    |  |||||||||||||||||||    
T  18470763 gagacaaaaatatgagtttttg 18470784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 256 - 430
Target Start/End: Original strand, 29661249 - 29661423
Alignment:
Q  256 agaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatttt 355  Q
    |||| ||||||||||||| |||||||||||| ||||||||||  ||  ||||||||||||||||||||||||| ||||||| |||| ||||||| |||||    
T  29661249 agaatagtacaacacaaggcagaacaacacaagacaaattttttatagcattgagtaattttttgttttatacgatttttgtgggacaaaatgctatttt 29661348  T
Q  356 ggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    ||||||||||| |||| |||||||||||||||||||||| | ||||||||||||| |||||||||||||||||||    
T  29661349 ggtattttagataacttgtacgtgggataaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttg 29661423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 254 - 430
Target Start/End: Original strand, 21784795 - 21784971
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatt 353  Q
    |||||||||||||||||||| ||||||||||||| |||||| ||  ||| |||||||||||||| |||||||||| |||||||  ||| ||||||| |||    
T  21784795 atagaacagtacaacacaaggcagaacaacacagaacaaatcttttatggcattgagtaattttatgttttatacgatttttggaggacaaaatgctatt 21784894  T
Q  354 ttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||||||||||||||| |||||||||| ||||||||||| | ||||||||||||| |||||||||||||||||||    
T  21784895 ttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttg 21784971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 254 - 430
Target Start/End: Complemental strand, 30849417 - 30849241
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatt 353  Q
    ||||||||||||||||||||||||||||||||||||||| ||||  ||| ||||||||||||||||||||||||| ||||||| |||| ||||||  |||    
T  30849417 atagaacagtacaacacaagacagaacaacacaggacaatttttttatggcattgagtaattttttgttttatacgatttttgggggacaaaatgttatt 30849318  T
Q  354 ttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    ||||||||||| |||||| |||  ||||| ||||||||||| | ||||||||||||| |||||||||||||||||||    
T  30849317 ttggtattttatacaacttgtatatgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttg 30849241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 254 - 430
Target Start/End: Complemental strand, 26371980 - 26371804
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatt 353  Q
    |||||||||||||||| || |||||||| |||| ||||||||||  ||| |||||| |||||||||||||||||| |||||||||||| ||||||| |||    
T  26371980 atagaacagtacaacataaaacagaacatcacatgacaaattttttatggcattgaataattttttgttttatacgatttttgagggacaaaatgctatt 26371881  T
Q  354 ttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    || ||||||||||||||| |||||||||| ||||||||||| | || |||||||||| |||||||||||||||||||    
T  26371880 ttagtattttagacaacttgtacgtgggacaaaaagttgtgctgtgatttggtgagggacaaaaatatgagtttttg 26371804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 254 - 430
Target Start/End: Original strand, 1870058 - 1870235
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttg-agggagaaaatgcaat 352  Q
    |||||||||||||||||||| ||||||| |||| || |||||||  ||||||||||||||||||||||||||||| ||||||  ||||| ||||||  ||    
T  1870058 atagaacagtacaacacaaggcagaacagcacatgataaattttttatgacattgagtaattttttgttttatacgatttttttagggacaaaatgttat 1870157  T
Q  353 tttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||| |||||||||||||| |||||||||| ||||||||||| | ||||||||||||| |||||||||||||||||||    
T  1870158 tttgatattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttg 1870235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 254 - 394
Target Start/End: Original strand, 47947684 - 47947824
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatt 353  Q
    |||||||||||||||||||| ||||||| |||| ||||||||||  ||| ||||||||||||||||||||||||| |||||||||||| ||||||| |||    
T  47947684 atagaacagtacaacacaaggcagaacagcacatgacaaattttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgctatt 47947783  T
Q  354 ttggtattttagacaactagtacgtgggataaaaagttgtg 394  Q
    |||||||||||||||||| |||||||||| |||||||||||    
T  47947784 ttggtattttagacaacttgtacgtgggacaaaaagttgtg 47947824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 219 - 430
Target Start/End: Complemental strand, 47316899 - 47316693
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaatagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttt 318  Q
    |||||||||||||||||||| ||||| |||||||||     | |||||| | |  |||| |||||||| ||||||||||  ||| |||||||||||||||    
T  47316899 gtgtttggtttgcaaaacagtaagtactggacagaa-----cggtacaagatagaacagtacaacacaagacaaattttttatggcattgagtaattttt 47316805  T
Q  319 tgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaa 418  Q
    |||||||||| |||||||||||| ||||||| ||||||||| ||||||||||| | | ||| || ||||||||||| | ||||||||||||| |||||||    
T  47316804 tgttttatacgatttttgagggacaaaatgctattttggtaatttagacaacttgcatgtgagacaaaaagttgtgttgtggtttggtgagggacaaaaa 47316705  T
Q  419 tatgagtttttg 430  Q
    ||||||||||||    
T  47316704 tatgagtttttg 47316693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 254 - 430
Target Start/End: Complemental strand, 3892197 - 3892021
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatt 353  Q
    |||||||||||||||||||| ||||||| || | ||||||||||  ||| |||||||||||||||||||||| || |||||||||| | ||||||| |||    
T  3892197 atagaacagtacaacacaaggcagaacagcatatgacaaattttttatggcattgagtaattttttgttttacacgatttttgaggaacaaaatgctatt 3892098  T
Q  354 ttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||||| ||||||||| |||||| ||| ||||||||||| | || |||||||||  |||||||||||||||||||    
T  3892097 ttggtattctagacaacttgtacgtaggacaaaaagttgtgctgtgatttggtgagagacaaaaatatgagtttttg 3892021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 276 - 430
Target Start/End: Original strand, 44748641 - 44748795
Alignment:
Q  276 agaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagta 375  Q
    |||||||||||| |||||||||  ||| || |||||||||||||||||||||| ||||||| |||| ||||||| ||||||||||||||||||||| |||    
T  44748641 agaacaacacagaacaaattttttatggcaatgagtaattttttgttttatacgatttttgggggacaaaatgctattttggtattttagacaacttgta 44748740  T
Q  376 cgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    ||||||| ||||||||||  | ||||||||||||| |||||||| ||||||||||    
T  44748741 cgtgggacaaaaagttgtattgtggtttggtgagggacaaaaatttgagtttttg 44748795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 254 - 430
Target Start/End: Complemental strand, 43189414 - 43189237
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgaggg-agaaaatgcaat 352  Q
    |||||||||||||||||||| ||||| |   || ||||||||||  ||| ||||||||||||| |||||| |||| ||||||| ||| | ||||| | ||    
T  43189414 atagaacagtacaacacaaggcagaatagtgcatgacaaattttttatggcattgagtaatttgttgtttcatacgatttttggggggacaaaatactat 43189315  T
Q  353 tttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    ||||||||| ||||||||| |||||||||||||||||||||| | ||||||||||||| |||||||||||||||||||    
T  43189314 tttggtattctagacaacttgtacgtgggataaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttg 43189237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 254 - 430
Target Start/End: Complemental strand, 30599179 - 30599003
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatt 353  Q
    |||||||||||||||||||| |||||||||||| ||||||||||  |||| |||||||||||| ||||||||||| ||||||  |||| ||||||  |||    
T  30599179 atagaacagtacaacacaaggcagaacaacacatgacaaattttttatgaaattgagtaatttgttgttttatacgatttttaggggacaaaatgttatt 30599080  T
Q  354 ttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    ||||||||||||| || | |||| || || ||||||||||| | ||||||| ||||| ||||||||||||| |||||    
T  30599079 ttggtattttagataatttgtacttgagacaaaaagttgtgttgtggtttgatgagggacaaaaatatgagcttttg 30599003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 266 - 430
Target Start/End: Original strand, 11250558 - 11250717
Alignment:
Q  266 aacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttag 365  Q
    |||||||| ||||||| |||||||||||||||  |||  |||||||||||||||||||||||  |||||||||||| ||||||| | |||||||||||||    
T  11250558 aacacaaggcagaacagcacaggacaaattttttatggtattgagtaattttttgttttatatgatttttgagggacaaaatgctagtttggtattttag 11250657  T
Q  366 acaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||||     ||||| ||||||||||| | ||||||||||||| |||||||||||| ||||||    
T  11250658 acaacta-----tgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgattttttg 11250717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 269 - 429
Target Start/End: Original strand, 34117392 - 34117551
Alignment:
Q  269 acaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagaca 368  Q
    |||||||||||||||||| ||||||||||  ||| |||||| |||||||| ||||||||| ||||||| ||||  |||||| ||||||| ||||||||||    
T  34117392 acaagacagaacaacacaagacaaattttt-atggcattgaataatttttcgttttatacgatttttgggggacgaaatgctattttggcattttagaca 34117490  T
Q  369 actagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagttttt 429  Q
    ||| |||| ||| | ||||| ||||||| ||||||||||||| ||||||||||||||||||    
T  34117491 acttgtacatggaacaaaaaattgtgatgtggtttggtgagggacaaaaatatgagttttt 34117551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 258 - 429
Target Start/End: Original strand, 26652795 - 26652965
Alignment:
Q  258 aacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttgg 357  Q
    ||||| |||| |||||  |||||| || ||||||||||||  |||||||||| |||||||||||||||||| |||||||  ||| ||||||| ||||||     
T  26652795 aacagcacaatacaagggagaacagcataggacaaattttt-atgacattgaataattttttgttttatacgatttttggcggacaaaatgctattttga 26652893  T
Q  358 tattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagttttt 429  Q
    |||||||||||||| |||||||||| ||||||||||| | ||||||| ||||| |||||||||| |||||||    
T  26652894 tattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttgctgagggacaaaaatatcagttttt 26652965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 276 - 430
Target Start/End: Complemental strand, 34295552 - 34295399
Alignment:
Q  276 agaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagta 375  Q
    |||||| |||| ||||||||||  |||||||||| |||||||||||||||||  ||||||| |||| ||||||| |||||| |||||||||||||| |||    
T  34295552 agaacagcacaagacaaattttt-atgacattgaataattttttgttttatatgatttttgggggacaaaatgctattttgatattttagacaacttgta 34295454  T
Q  376 cgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    ||||||| ||||||||||| | ||||||| ||||| |||||||||| ||||||||    
T  34295453 cgtgggacaaaaagttgtgctgtggtttgctgagggacaaaaatatcagtttttg 34295399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 256 - 430
Target Start/End: Original strand, 43368128 - 43368301
Alignment:
Q  256 agaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatttt 355  Q
    ||||||| |||| |||||  |||||| |||| ||||||||||  || ||||||| |||||||||||||||||| ||||| |||||| ||||||| |||||    
T  43368128 agaacagcacaatacaagggagaacagcacatgacaaattttt-atcacattgaataattttttgttttatacgattttggagggacaaaatgctatttt 43368226  T
Q  356 ggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    | |||||||||||||| |||||| ||| ||||||||||| | ||||||| ||||| |||||||||| ||||||||    
T  43368227 gatattttagacaacttgtacgtaggacaaaaagttgtgctgtggtttgctgaggcacaaaaatatcagtttttg 43368301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 219 - 428
Target Start/End: Original strand, 46408775 - 46408987
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattg 308  Q
    ||||||||||||||||||||||||||||||| ||||          ||||||||||||||||||| ||||||| ||||       ||||  ||| |||||    
T  46408775 gtgtttggtttgcaaaacagcaagtattggatagaacagtacaagatagaacagtacaacacaaggcagaacatcaca-------ttttttatggcattg 46408867  T
Q  309 agtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtga 408  Q
    ||||||||||| |||||||| ||||||||| || || |||| |||||| |||||||||||||| ||| || ||| ||||||||||| | |||||||||||    
T  46408868 agtaattttttattttatacgatttttgagagacaatatgctattttgatattttagacaacttgtatgtcggacaaaaagttgtgctgtggtttggtga 46408967  T
Q  409 ggaacaaaaatatgagtttt 428  Q
    || |||||||||||||||||    
T  46408968 gggacaaaaatatgagtttt 46408987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 264 - 430
Target Start/End: Original strand, 21133305 - 21133472
Alignment:
Q  264 acaacacaagacagaacaacacaggacaaattttgcatgacattgagtaatttt-ttgttttatacaatttttgagggagaaaatgcaattttggtattt 362  Q
    |||||||||| ||||||||||||| |||||||||  |||||||||||||||||| ||||||||||| ||||||| | ||  |||||| ||||||||||||    
T  21133305 acaacacaaggcagaacaacacagtacaaattttttatgacattgagtaatttttttgttttatacgatttttgggagacgaaatgctattttggtattt 21133404  T
Q  363 tagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    ||||||| | ||| ||| || ||||||||||||| ||||||  ||||| | || ||||| ||||||||    
T  21133405 tagacaatttgtatgtgagacaaaaagttgtgatgtggtttattgagggaaaataatatcagtttttg 21133472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 258 - 421
Target Start/End: Complemental strand, 43214091 - 43213929
Alignment:
Q  258 aacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttgg 357  Q
    ||||| ||||||||||  |||||| |||||||||||||||  |||||||||| | |||||||||||||||  |||||||||| |  |||||| |||||||    
T  43214091 aacagcacaacacaaggtagaacagcacaggacaaattttt-atgacattgaatcattttttgttttataggatttttgaggcacgaaatgctattttgg 43213993  T
Q  358 tattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatat 421  Q
    |||||| ||||||| ||| |||||| ||||||||||| | ||||||||||| | ||||||||||    
T  43213992 tatttttgacaacttgtatgtgggacaaaaagttgtgttgtggtttggtgaaggacaaaaatat 43213929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 256 - 430
Target Start/End: Original strand, 329397 - 329570
Alignment:
Q  256 agaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatttt 355  Q
    ||||||| |||||||||| || ||||  ||| ||||||||||  |||  ||||| |||||| ||||||||||  ||||||| |||| ||||||| |||||    
T  329397 agaacagcacaacacaaggcataacagtacatgacaaattttt-atggtattgaataatttcttgttttatatgatttttgggggacaaaatgctatttt 329495  T
Q  356 ggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    ||| |||||| ||||| |||||||||| ||||||||||||| ||||||||||||| |||||||| | ||||||||    
T  329496 ggtgttttaggcaacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatttcagtttttg 329570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 219 - 333
Target Start/End: Original strand, 47442731 - 47442840
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaatagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttt 318  Q
    ||||||||||||||||||||||||||||||||| ||     |||||||||| ||| |||||||  ||||||||||||||  |||||||||||||||||||    
T  47442731 gtgtttggtttgcaaaacagcaagtattggacaaaa-----cagtacaacataaggcagaacactacaggacaaattttttatgacattgagtaattttt 47442825  T
Q  319 tgttttatacaattt 333  Q
    |||||||||||||||    
T  47442826 tgttttatacaattt 47442840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 254 - 430
Target Start/End: Complemental strand, 23349461 - 23349286
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatt 353  Q
    ||||||||  |||||| |||  |||||| |||| ||||||||||  || ||||||| |||||||||||||| ||| ||| ||| ||||  |||||  |||    
T  23349461 atagaacaaaacaacataaggtagaacagcacatgacaaattttt-ataacattgaataattttttgttttctacgattgttgggggacgaaatgtcatt 23349363  T
Q  354 ttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    || ||||||||||||||| ||| |||||| ||||||||||| | ||||||||||||| |||||||||| ||||||||    
T  23349362 ttagtattttagacaacttgtatgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatcagtttttg 23349286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 276 - 430
Target Start/End: Original strand, 1363584 - 1363736
Alignment:
Q  276 agaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagta 375  Q
    ||||||||||| ||||||||||  ||| |||||| |||||||||||||||||||||||||| || |  |||||| ||||| ||||||| ||||||  |||    
T  1363584 agaacaacacatgacaaattttt-atggcattgaataattttttgttttatacaatttttg-ggtacgaaatgctatttttgtatttttgacaacctgta 1363681  T
Q  376 cgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||| || ||||||||||||| ||||||| ||||| |||||||||| || |||||    
T  1363682 cgtgagacaaaaagttgtgatgtggtttgatgagggacaaaaatatcagcttttg 1363736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 300 - 430
Target Start/End: Original strand, 38301313 - 38301442
Alignment:
Q  300 atgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatg 399  Q
    |||||||||| ||||||||||||| |||| ||||||| |||| ||||||  |||||| |||||||||||||| || ||||||| ||||||||||| | ||    
T  38301313 atgacattgaataattttttgtttaatacgatttttgggggacaaaatgttattttgatattttagacaacttgt-cgtgggacaaaaagttgtgttgtg 38301411  T
Q  400 gtttggtgaggaacaaaaatatgagtttttg 430  Q
    ||||| ||||| |||||||||| ||||||||    
T  38301412 gtttgctgagggacaaaaatatcagtttttg 38301442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 314 - 430
Target Start/End: Original strand, 20127273 - 20127389
Alignment:
Q  314 ttttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaac 413  Q
    ||||||||||||||| ||||||| ||||  |||||  |||||||||||||| |||| | |||||||||| ||||||||||||| ||||||| ||||||||    
T  20127273 ttttttgttttatacgatttttgggggacgaaatgtcattttggtattttacacaaattgtacgtgggacaaaaagttgtgatgtggtttgctgaggaac 20127372  T
Q  414 aaaaatatgagtttttg 430  Q
    |||||||| || |||||    
T  20127373 aaaaatatcagcttttg 20127389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 219 - 372
Target Start/End: Original strand, 16962991 - 16963150
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaatagaacagtacaacacaagacag-----aacaacacaggacaaattttgcatgacattgagtaa 313  Q
    |||||||||||||||||||| ||||| ||||||||| || |||  ||||  ||  ||||     |||| |||| ||||||||||  ||| ||||||||||    
T  16962991 gtgtttggtttgcaaaacagtaagtactggacagaacagtacaacacaaggcagaacagcgcataacagcacatgacaaattttttatggcattgagtaa 16963090  T
Q  314 tttt-ttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaacta 372  Q
    |||| ||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||    
T  16963091 tttttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacta 16963150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 276 - 409
Target Start/End: Original strand, 9913472 - 9913604
Alignment:
Q  276 agaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagta 375  Q
    |||||| |||| ||||||||||  |||  ||||| |||||||| ||||||||| ||||||| ||||  |||||  ||||||||||||||||||||  |||    
T  9913472 agaacaccacatgacaaattttt-atggaattgaataatttttagttttatacgatttttgggggacgaaatgttattttggtattttagacaacctgta 9913570  T
Q  376 cgtgggataaaaagttgtgatatggtttggtgag 409  Q
    ||||||| ||||||||||||| ||||||||||||    
T  9913571 cgtgggaaaaaaagttgtgatgtggtttggtgag 9913604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 276 - 409
Target Start/End: Original strand, 9927160 - 9927292
Alignment:
Q  276 agaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagta 375  Q
    |||||| |||| ||||||||||  |||  ||||| |||||||| ||||||||| ||||||| ||||  |||||  ||||||||||||||||||||  |||    
T  9927160 agaacaccacatgacaaattttt-atggaattgaataatttttagttttatacgatttttgggggacgaaatgttattttggtattttagacaacctgta 9927258  T
Q  376 cgtgggataaaaagttgtgatatggtttggtgag 409  Q
    ||||||| ||||||||||||| ||||||||||||    
T  9927259 cgtgggaaaaaaagttgtgatgtggtttggtgag 9927292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 305 - 419
Target Start/End: Complemental strand, 41665695 - 41665581
Alignment:
Q  305 attgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttg 404  Q
    ||||| ||||||| ||||||||| |||||||| | ||  |||||| ||||| ||||||||||||||| ||||||| || ||||||||||||| |||||||    
T  41665695 attgaataattttctgttttatataatttttgggtgacgaaatgctatttttgtattttagacaacttgtacgtgagacaaaaagttgtgatgtggtttg 41665596  T
Q  405 gtgaggaacaaaaat 419  Q
    | |||| ||||||||    
T  41665595 gcgagggacaaaaat 41665581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 257 - 430
Target Start/End: Original strand, 48894645 - 48894817
Alignment:
Q  257 gaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttg 356  Q
    |||||||||||||||||  | |||| ||| |||||| ||||   || |||||| |||||||||||||||||  ||||||| |||| ||||||  ||||||    
T  48894645 gaacagtacaacacaaggtaaaacagcactggacaattttttattg-cattgaataattttttgttttataagatttttgggggacaaaatgttattttg 48894743  T
Q  357 gtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |  |||||||  | | |||||||||| ||||||||||||| |||||| ||||   |||||||||||||||||||    
T  48894744 gatttttagatgatttgtacgtgggacaaaaagttgtgatgtggtttagtgaatgacaaaaatatgagtttttg 48894817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 264 - 415
Target Start/End: Complemental strand, 15035413 - 15035263
Alignment:
Q  264 acaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtatttt 363  Q
    ||||||||| ||||||||||||| ||||||||||  |||  ||||| |||||||||||||| ||| |||||||  ||  ||||||  |||||| ||||||    
T  15035413 acaacacaaaacagaacaacacatgacaaattttt-atggtattgaataattttttgttttgtacgatttttggtgggcaaaatgttattttgatatttt 15035315  T
Q  364 agacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaa 415  Q
    |||||| | ||| |||| | ||||||||||| | |||| |||||||||||||    
T  15035314 agacaatttgtatgtggtacaaaaagttgtgttgtggtctggtgaggaacaa 15035263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 254 - 329
Target Start/End: Original strand, 12982227 - 12982302
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttataca 329  Q
    |||||||||||||||||||| ||||||| |||| |||||| |||  ||| ||||||||||||||||||||||||||    
T  12982227 atagaacagtacaacacaaggcagaacagcacatgacaaaatttttatggcattgagtaattttttgttttataca 12982302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 264 - 419
Target Start/End: Complemental strand, 22724691 - 22724537
Alignment:
Q  264 acaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtatttt 363  Q
    |||||| ||| |||||||||||| || ||||||| | ||  ||||| ||||||| ||| |||||  ||||||| | ||  |||||| ||||| |||||||    
T  22724691 acaacataaggcagaacaacacaagataaatttttc-tggtattgaataattttctgtattatatgatttttgggcgacgaaatgctatttttgtatttt 22724593  T
Q  364 agacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaat 419  Q
    |||||||| |||||||||| | ||||||| | | ||||||||||||| ||||||||    
T  22724592 agacaacttgtacgtgggacataaagttgcgctgtggtttggtgagggacaaaaat 22724537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 253 - 430
Target Start/End: Original strand, 11822155 - 11822323
Alignment:
Q  253 aatagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaat 352  Q
    |||||||||  |||||||||| |||||||||| ||||||||||||  ||| ||||||  | |||||| |||||||| ||||||| ||||  |||||| ||    
T  11822155 aatagaacaacacaacacaaggcagaacaacataggacaaatttt-tatggcattga--attttttttttttatacgatttttgggggacgaaatgctat 11822251  T
Q  353 tttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    ||||   ||||| |||      |||||||| ||||||||||| | |||||| |||| | |||||||||||||||||||    
T  11822252 tttgaatttttaaaca------acgtgggacaaaaagttgtgttgtggtttagtgaaggacaaaaatatgagtttttg 11822323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 311 - 430
Target Start/End: Original strand, 37966955 - 37967074
Alignment:
Q  311 taattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgagg 410  Q
    |||||||||||||||||| ||||||  ||||  |||||| |||||||  ||||||| |||| |||||||| | ||||||||||||| |||| | ||||      
T  37966955 taattttttgttttatacgatttttttgggacgaaatgctattttggatttttagataacttgtacgtggaacaaaaagttgtgatgtggtctagtgaaa 37967054  T
Q  411 aacaaaaatatgagtttttg 430  Q
     ||||||||||| |||||||    
T  37967055 gacaaaaatatgggtttttg 37967074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 304 - 430
Target Start/End: Original strand, 17237050 - 17237176
Alignment:
Q  304 cattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggttt 403  Q
    |||||| |||||||||||||||||  ||||||| ||||  |||||  |||||||  ||||||| || | ||||||| || ||||||||||| | ||||||    
T  17237050 cattgaataattttttgttttataagatttttgggggacgaaatgttattttggatttttagataatttgtacgtgagacaaaaagttgtgttgtggttt 17237149  T
Q  404 ggtgaggaacaaaaatatgagtttttg 430  Q
     ||||   |||||||||||||||||||    
T  17237150 agtgaatgacaaaaatatgagtttttg 17237176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 264 - 430
Target Start/End: Original strand, 48445456 - 48445621
Alignment:
Q  264 acaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtatttt 363  Q
    |||||||||| || ||||||||| ||||||||||  |||  ||||| |||||| ||||||||||  ||||||| |||| ||||||  ||||| || ||||    
T  48445456 acaacacaaggcataacaacacatgacaaattttt-atggtattgaataatttcttgttttatatgatttttgggggacaaaatgttattttcgtgtttt 48445554  T
Q  364 agacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||||| ||| | | || ||||||||||  | || |||||||| | |||||||| | ||||||||    
T  48445555 agacaacttgtatgcgagacaaaaagttgtcctgtgatttggtgaaggacaaaaatttcagtttttg 48445621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 264 - 405
Target Start/End: Complemental strand, 22724192 - 22724052
Alignment:
Q  264 acaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtatttt 363  Q
    |||||| ||| |||||||||||| || |||||||  |||  ||||| ||||||| ||| |||||  ||||||| | ||  |||||| ||||| |||||||    
T  22724192 acaacataaggcagaacaacacaagataaattttt-atggtattgaataattttctgtattatatgatttttgggtgacgaaatgctatttttgtatttt 22724094  T
Q  364 agacaactagtacgtgggataaaaagttgtgatatggtttgg 405  Q
    | |||||| |||||||||||||||||||| | | ||||||||    
T  22724093 atacaacttgtacgtgggataaaaagttgcgttgtggtttgg 22724052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 314 - 426
Target Start/End: Original strand, 22631722 - 22631834
Alignment:
Q  314 ttttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaac 413  Q
    ||||||||||||||| ||||||| ||||  ||||   ||||||||||||||||||||| ||||||   | |||||||| || | ||||||||||| | ||    
T  22631722 ttttttgttttatacgatttttgggggacgaaatatcattttggtattttagacaacttgtacgtataacaaaaagttatgttgtggtttggtgaaggac 22631821  T
Q  414 aaaaatatgagtt 426  Q
    |||||||| ||||    
T  22631822 aaaaatatcagtt 22631834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 258 - 429
Target Start/End: Complemental strand, 46448810 - 46448640
Alignment:
Q  258 aacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttgg 357  Q
    |||||||||| ||||| || |||||||  |||||| ||||   || |||||| |||||||||||||||||  ||||||  ||||  |||||  |||||||    
T  46448810 aacagtacaagacaaggcaaaacaacattggacaattttttattg-cattgaataattttttgttttataagatttttaggggacgaaatgttattttgg 46448712  T
Q  358 tattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagttttt 429  Q
      ||||||| || |  ||| ||||| ||||||||||| | |||||| |||| | ||||||||||||||||||    
T  46448711 atttttagataatttatacatgggacaaaaagttgtgctgtggtttagtgacggacaaaaatatgagttttt 46448640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 304 - 419
Target Start/End: Original strand, 46627144 - 46627259
Alignment:
Q  304 cattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggttt 403  Q
    |||||| |||||||||||||||||||||||||| | ||  |||| | ||||| |||||||||||||   ||||||| || ||||| ||||| | ||||||    
T  46627144 cattgaataattttttgttttatacaatttttgggagacgaaatactatttttgtattttagacaatccgtacgtgagacaaaaaattgtgctgtggttt 46627243  T
Q  404 ggtgaggaacaaaaat 419  Q
    | ||||| | ||||||    
T  46627244 gatgagggataaaaat 46627259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 351 - 419
Target Start/End: Original strand, 34519529 - 34519597
Alignment:
Q  351 attttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaat 419  Q
    ||||| ||||||||||||||| |||| ||||| ||||||||||| | |||||||| |||| ||||||||    
T  34519529 atttttgtattttagacaacttgtacctgggacaaaaagttgtgttgtggtttggcgagggacaaaaat 34519597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 351 - 430
Target Start/End: Original strand, 48699419 - 48699498
Alignment:
Q  351 attttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    ||||||||||||||||||||| |||||||| | ||| ||||||| | |||||| |||||| |||| ||| | ||||||||    
T  48699419 attttggtattttagacaacttgtacgtggaacaaatagttgtgttgtggtttagtgagggacaagaatttcagtttttg 48699498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 366 - 430
Target Start/End: Original strand, 16963174 - 16963238
Alignment:
Q  366 acaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||| |||||||||| ||||||||||  | ||||||| | ||| |||||||||||||||||||    
T  16963174 acaacttgtacgtgggacaaaaagttgtattgtggtttgataagggacaaaaatatgagtttttg 16963238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 351 - 419
Target Start/End: Complemental strand, 26910484 - 26910416
Alignment:
Q  351 attttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaat 419  Q
    ||||| ||||||| ||||||| ||||||| || ||||||||||| | |||||||| |||| ||||||||    
T  26910484 atttttgtatttttgacaacttgtacgtgtgacaaaaagttgtgttgtggtttggcgagggacaaaaat 26910416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 358 - 410
Target Start/End: Original strand, 35645475 - 35645527
Alignment:
Q  358 tattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgagg 410  Q
    |||||||||||||| ||||||  |||||||||||||| | |||||| ||||||    
T  35645475 tattttagacaacttgtacgtacgataaaaagttgtgttgtggtttagtgagg 35645527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 329 - 413
Target Start/End: Original strand, 42332058 - 42332142
Alignment:
Q  329 aatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaac 413  Q
    ||||||||  ||| ||||||  |||||| ||||| |||||| | ||| ||| || ||||||||||||| ||||||||||| ||||    
T  42332058 aatttttggtggataaaatgttattttgatatttaagacaatttgtatgtgagacaaaaagttgtgatgtggtttggtgaagaac 42332142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 116; Significance: 7e-59; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 219 - 430
Target Start/End: Complemental strand, 373170 - 372964
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaatagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttt 318  Q
    |||||||||||||||||||||||||     || ||| |||||||||||||| ||| |||||||| | || | |||||||  ||| |||||||||||||||    
T  373170 gtgtttggtttgcaaaacagcaagt-----actgaacagaacagtacaacataaggcagaacaatatagaataaattttttatggcattgagtaattttt 373076  T
Q  319 tgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaa 418  Q
    |||||||||| |||||||||||| ||||||  ||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||| |||||||    
T  373075 tgttttatacgatttttgagggacaaaatgatattttggtattttagacaacttgtacgtgggacaaaaagttgtgttatggtttggtgagggacaaaaa 372976  T
Q  419 tatgagtttttg 430  Q
    ||||||||||||    
T  372975 tatgagtttttg 372964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 115; Significance: 3e-58; HSPs: 2)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 219 - 430
Target Start/End: Complemental strand, 12757 - 12536
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattg 308  Q
    |||||||||||||||||||||||||| |||| ||||          ||||||||||||||||| | ||||||| |||| ||||||||||  ||  |||||    
T  12757 gtgtttggtttgcaaaacagcaagtactggatagaacagtacaagatagaacagtacaacacatgtcagaacagcacaagacaaattttttatagcattg 12658  T
Q  309 agtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtga 408  Q
    |||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||| |||||||||| ||||||||||| | |||||||||||    
T  12657 agtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtga 12558  T
Q  409 ggaacaaaaatatgagtttttg 430  Q
    || |||||||||||||||||||    
T  12557 gggacaaaaatatgagtttttg 12536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 219 - 430
Target Start/End: Complemental strand, 18275 - 18054
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattg 308  Q
    |||||||||||||||||||||||||| |||| ||||          ||||||||||||||||| | ||||||| |||| ||||||||||  ||  |||||    
T  18275 gtgtttggtttgcaaaacagcaagtactggatagaacagtacaagatagaacagtacaacacatgtcagaacagcacaagacaaattttttatagcattg 18176  T
Q  309 agtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtga 408  Q
    |||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||| |||||||||| ||||||||||| | |||||||||||    
T  18175 agtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtga 18076  T
Q  409 ggaacaaaaatatgagtttttg 430  Q
    || |||||||||||||||||||    
T  18075 gggacaaaaatatgagtttttg 18054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 115; Significance: 3e-58; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 219 - 430
Target Start/End: Original strand, 51314 - 51534
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattg 308  Q
    |||||||||||||||||||||||||| |||||||||          |||||||||| || ||||||||||||| |||| ||||||||||  |||||||||    
T  51314 gtgtttggtttgcaaaacagcaagtactggacagaacagtacaatatagaacagtataatacaagacagaacagcacaagacaaattttttatgacattg 51413  T
Q  309 agtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtga 408  Q
    |||||||||||||||||||| |||||||||||| ||||||| |||||| |||||||||||||| |||||||||| ||||||||||| | |||||| ||||    
T  51414 agtaattttttgttttatacgatttttgagggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaagttgtgctgtggttt-gtga 51512  T
Q  409 ggaacaaaaatatgagtttttg 430  Q
    || |||||||||||||||||||    
T  51513 gggacaaaaatatgagtttttg 51534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 115; Significance: 3e-58; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 219 - 430
Target Start/End: Original strand, 101824 - 102045
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattg 308  Q
    ||||||||||||||||||||||||||  ||||||||          ||||||||||||| | |||  |||||| |||||||||||||||  ||| |||||    
T  101824 gtgtttggtttgcaaaacagcaagtaccggacagaacagtataagatagaacagtacaatataaggtagaacagcacaggacaaattttttatggcattg 101923  T
Q  309 agtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtga 408  Q
    |||||||||||||||||||| |||||| ||||| ||||||| ||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||    
T  101924 agtaattttttgttttatacgattttttagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgatgtggtttggtga 102023  T
Q  409 ggaacaaaaatatgagtttttg 430  Q
    || |||||||||||||||||||    
T  102024 gggacaaaaatatgagtttttg 102045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 111; Significance: 7e-56; HSPs: 2)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 219 - 430
Target Start/End: Complemental strand, 15583 - 15381
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaatagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttt 318  Q
    |||||||||||| ||||||| ||||| |||||||||     |||||||||||||| ||||||| ||||||| |||||||  |||||||||||||||||||    
T  15583 gtgtttggtttgtaaaacagtaagtactggacagaa-----cagtacaacacaaggcagaacagcacaggataaattttttatgacattgagtaattttt 15489  T
Q  319 tgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaa 418  Q
    |||||||||| ||||||||||    |||||| ||||||||||||||||||||| |||| ||||| ||||||||||| | ||||||||||||| |||||||    
T  15488 tgttttatacgatttttgagg----aaatgctattttggtattttagacaacttgtacatgggacaaaaagttgtgttgtggtttggtgagggacaaaaa 15393  T
Q  419 tatgagtttttg 430  Q
    ||||||||||||    
T  15392 tatgagtttttg 15381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 305 - 394
Target Start/End: Complemental strand, 13704 - 13615
Alignment:
Q  305 attgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtg 394  Q
    ||||| ||||| || || |||||| |||||||| ||| ||||| | ||||||||||| ||||||||| |||| || || |||||||||||    
T  13704 attgattaattattggtcttatacgatttttgatggacaaaatactattttggtattctagacaacttgtacatgtgacaaaaagttgtg 13615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208 (Bit Score: 107; Significance: 2e-53; HSPs: 1)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 219 - 430
Target Start/End: Complemental strand, 2559 - 2338
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattg 308  Q
    |||||||||||||||||||||||||| |||||||||          ||||| ||||||||||||| ||||||| |||| ||||||||||  |||||||||    
T  2559 gtgtttggtttgcaaaacagcaagtactggacagaacagtacaagatagaatagtacaacacaaggcagaacagcacatgacaaattttttatgacattg 2460  T
Q  309 agtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtga 408  Q
    |||||||||||||||||||  ||||||  |||| ||||  | ||||||||||||||||||||| |||||||||| ||||||||||| | |||||||||||    
T  2459 agtaattttttgttttataggatttttatgggacaaaaaactattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtga 2360  T
Q  409 ggaacaaaaatatgagtttttg 430  Q
    || |||||||||||||||||||    
T  2359 gggacaaaaatatgagtttttg 2338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0729 (Bit Score: 101; Significance: 7e-50; HSPs: 1)
Name: scaffold0729
Description:

Target: scaffold0729; HSP #1
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 254 - 430
Target Start/End: Complemental strand, 4755 - 4579
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatt 353  Q
    |||||||||||||||||||| ||||||| |||||||||||||||  ||| ||||||||||||||||||||||||| |||||| || || ||||||  |||    
T  4755 atagaacagtacaacacaaggcagaacagcacaggacaaattttttatggcattgagtaattttttgttttatacgattttttagagacaaaatgatatt 4656  T
Q  354 ttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    ||| | ||||||||||||  ||||||||| ||||||||||| | ||||||||||||| |||||||||||||||||||    
T  4655 ttgatgttttagacaacttttacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttg 4579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 100; Significance: 3e-49; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 219 - 430
Target Start/End: Original strand, 23452 - 23671
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggacagaa----------tagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattg 308  Q
    ||||||||||||||||||||||| || |||||||||          ||||||| ||||||||||| ||||||| ||| |||||||||||  ||| |||||    
T  23452 gtgtttggtttgcaaaacagcaaatactggacagaacagtacaagatagaacaatacaacacaaggcagaacagcactggacaaattttttatggcattg 23551  T
Q  309 agtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtga 408  Q
    |||||||||||||||||||| ||||||||||  || ||||  ||||||||||||||||||||| |||||||||| ||||||||||| | |||||||||||    
T  23552 agtaattttttgttttatacgatttttgagg--gacaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtga 23649  T
Q  409 ggaacaaaaatatgagtttttg 430  Q
     | |||||||||||||||||||    
T  23650 aggacaaaaatatgagtttttg 23671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 95; Significance: 3e-46; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 258 - 428
Target Start/End: Complemental strand, 19262 - 19092
Alignment:
Q  258 aacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttgg 357  Q
    ||||||||||||||||  |||||| |||| | ||||||||  ||| ||||||||||||||||||||||||| |||||||| ||| ||||||  |||||||    
T  19262 aacagtacaacacaaggtagaacagcacatggcaaattttttatggcattgagtaattttttgttttatacgatttttgaaggacaaaatgttattttgg 19163  T
Q  358 tattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttt 428  Q
    |||||||||||||| |||||||||| ||||||||||| | || |||||||||| |||||||||||||||||    
T  19162 tattttagacaacttgtacgtgggacaaaaagttgtgctgtgatttggtgagggacaaaaatatgagtttt 19092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0957 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0957
Description:

Target: scaffold0957; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 254 - 430
Target Start/End: Complemental strand, 2671 - 2496
Alignment:
Q  254 atagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaatt 353  Q
    |||||||| |||||||||||  ||||||||||| ||||||||||  |||| |||| ||||||||||||||||||| ||||||| |||| ||||||| |||    
T  2671 atagaacaatacaacacaaggtagaacaacacatgacaaattttttatgagattgggtaattttttgttttatacgatttttgggggacaaaatgctatt 2572  T
Q  354 ttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    |||||||||||||||||| ||||||| ||  || ||||||| | ||||||||| ||| ||||| |||||||||||||    
T  2571 ttggtattttagacaacttgtacgtgaga-caatagttgtgttgtggtttggttagggacaaagatatgagtttttg 2496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 81; Significance: 6e-38; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 258 - 430
Target Start/End: Complemental strand, 1814 - 1643
Alignment:
Q  258 aacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttgg 357  Q
    ||||| ||||||||||| |||||||||||| |||||||||  |||  ||||| |||||||||||||||||  | ||||||||||  |||||| |||||||    
T  1814 aacagcacaacacaagagagaacaacacagaacaaattttt-atggtattgaataattttttgttttatatgacttttgagggacgaaatgctattttgg 1716  T
Q  358 tattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    | |||||||||||| |||||||||| ||||||||||| | ||||||||||||| |||||||| | ||||||||    
T  1715 ttttttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatttcagtttttg 1643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 78; Significance: 4e-36; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 253 - 430
Target Start/End: Original strand, 15091 - 15268
Alignment:
Q  253 aatagaacagtacaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaat 352  Q
    ||||||||||||||||| ||| |||||||||||| || |||   |  ||| ||||||||||||| ||||||||||  ||||||| |||| ||||| | ||    
T  15091 aatagaacagtacaacataaggcagaacaacacatgaaaaaaaatttatggcattgagtaatttgttgttttataagatttttgggggacaaaatactat 15190  T
Q  353 tttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
    ||| ||||||||||||||| ||||||| || ||||||||||| | |||||||||| || |||||||||||||||||||    
T  15191 tttagtattttagacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgggggacaaaaatatgagtttttg 15268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 78; Significance: 4e-36; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 264 - 429
Target Start/End: Complemental strand, 5605 - 5441
Alignment:
Q  264 acaacacaagacagaacaacacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtatttt 363  Q
    |||||||||| ||||||| |||||||||||||||  |||||||||| |||||||||||||||||| ||||||| ||    |||||  ||||| |||||||    
T  5605 acaacacaaggcagaacagcacaggacaaattttt-atgacattgaataattttttgttttatacgatttttggggctcgaaatgttatttttgtatttt 5507  T
Q  364 agacaactagtacgtgggataaaaagttgtgatatggtttggtgaggaacaaaaatatgagttttt 429  Q
    || ||||| ||| |||||| ||||||||||||| ||||||||||||| ||||||||||| ||||||    
T  5506 aggcaacttgtatgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgtgttttt 5441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 283 - 430
Target Start/End: Complemental strand, 13833 - 13687
Alignment:
Q  283 cacaggacaaattttgcatgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtggga 382  Q
    |||||||||||||||  |||  ||||| |||||| ||||||||||   |||||| ||||   ||||| |||||||| |||||||||||| ||| ||||||    
T  13833 cacaggacaaattttt-atggtattgaataatttcttgttttatatgctttttgggggacggaatgctattttggtgttttagacaacttgtaagtggga 13735  T
Q  383 taaaaagttgtgatatggtttggtgaggaacaaaaatatgagtttttg 430  Q
     ||||||||||  | ||||||||||||| |||||||| | ||||||||    
T  13734 caaaaagttgtactgtggtttggtgagggacaaaaatttcagtttttg 13687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 300 - 415
Target Start/End: Complemental strand, 33674 - 33559
Alignment:
Q  300 atgacattgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatg 399  Q
    |||| ||||| |||||||| || |||||||| |||||| ||| ||||  | |||||||||||||| |||| | |||||||||| ||||||||||| | ||    
T  33674 atgatattgaataatttttggtcttatacaagttttgatggacaaaagcctattttggtattttatacaatttgtacgtgggacaaaaagttgtgttgtg 33575  T
Q  400 gtttggtgaggaacaa 415  Q
    ||||| ||||| ||||    
T  33574 gtttgatgagggacaa 33559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 305 - 430
Target Start/End: Complemental strand, 43074 - 42950
Alignment:
Q  305 attgagtaattttttgttttatacaatttttgagggagaaaatgcaattttggtattttagacaactagtacgtgggataaaaagttgtgatatggtttg 404  Q
    ||||| |||||| ||||||||||  ||| ||  |||| || |||| |||||||| |||||||||| | |||||||||| ||||||||||| | |||||||    
T  43074 attgaataatttcttgttttatatgattgtttggggacaacatgctattttggtgttttagacaatt-gtacgtgggacaaaaagttgtgttgtggtttg 42976  T
Q  405 gtgaggaacaaaaatatgagtttttg 430  Q
    |||||| ||| |||| | ||||||||    
T  42975 gtgagggacacaaatttcagtttttg 42950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 219 - 251
Target Start/End: Original strand, 338762 - 338794
Alignment:
Q  219 gtgtttggtttgcaaaacagcaagtattggaca 251  Q
    |||||||||||||||||||||||||| ||||||    
T  338762 gtgtttggtttgcaaaacagcaagtactggaca 338794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University