View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16832_low_21 (Length: 361)
Name: NF16832_low_21
Description: NF16832
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16832_low_21 |
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Alignment Details
Target: chr7 (Bit Score: 315; Significance: 1e-177; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 315; E-Value: 1e-177
Query Start/End: Original strand, 1 - 327
Target Start/End: Complemental strand, 33944587 - 33944261
Alignment:
| Q |
1 |
aatgacttaattaatgaataagtactgatcgtataaaggcttgcaagacttgattagtacttggacttggaccaaaagcttagtgatgggaaaagtattt |
100 |
Q |
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| T |
33944587 |
aatgacttaattaatgaataagtactgattgtataaaggcttgcaagacttgattagtacttggacttggaccaaaagcttagtgatgggaaaagtattt |
33944488 |
T |
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| Q |
101 |
attgatttactataagaaaattaagatatgaaaataaattacttgtagtaaataaattaagccaataatttacataaaaattattatggtaattgattta |
200 |
Q |
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|||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33944487 |
attgatttactatatgaaaattaagatatgaaaataaattacttgcagtaaataaattaagccaataatttacataaaaattattatggtaattgattta |
33944388 |
T |
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| Q |
201 |
cttgtggtaaaattaagataaaaaggcaataaaattaccatatgaaaataactatgatcaaaataagataaaattagtaattttgacttatataattata |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33944387 |
cttgtggtaaaattaagataaaaaggcaataaaattaccatatgaaaataactatgatcaaaataagataaaattagtaattttgacttatataattata |
33944288 |
T |
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| Q |
301 |
aaaattaaagataattttgttcctatg |
327 |
Q |
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||||||||||||||||||||||||||| |
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| T |
33944287 |
aaaattaaagataattttgttcctatg |
33944261 |
T |
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