View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16832_low_41 (Length: 237)
Name: NF16832_low_41
Description: NF16832
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16832_low_41 |
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Alignment Details
Target: chr7 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 39232711 - 39232933
Alignment:
| Q |
1 |
aatcctctttcagtttggcatcttattctcttaaatttttcatttcagccactcagtcttgggaggtctgaaaattcgtcattgaaaagatcaagcacaa |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| |
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| T |
39232711 |
aatcctctttcagtttggcatcttattctcttaaatttttcatttcagccactcagtcttgggaggtctgaaagttcgtcatttaaaagatcaagcacaa |
39232810 |
T |
|
| Q |
101 |
caggaaaaggtaatttgaaagaaagaatgcctcatttctggtctgaaagttctgcctctgaaaacgaggatcttacgagagatcttaagagacaaaagaa |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39232811 |
caggaaaaggtaatttgaaagaaagaatgcctcatttctggtctgaaagttctgcctctgaaaacgaggatcttacgagagatcttaagagacaaaagaa |
39232910 |
T |
|
| Q |
201 |
tcttacaaatgaagatggtattg |
223 |
Q |
| |
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||||||||||||||||||||||| |
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|
| T |
39232911 |
tcttacaaatgaagatggtattg |
39232933 |
T |
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