View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16832_low_47 (Length: 206)
Name: NF16832_low_47
Description: NF16832
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16832_low_47 |
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Alignment Details
Target: chr1 (Bit Score: 189; Significance: 1e-103; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 189; E-Value: 1e-103
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 5737215 - 5737403
Alignment:
| Q |
1 |
aaggtccatgacttcacacctctttaaagcaaagtaaaattgatagataaattggttgtaatctcaaatgtccaaaagcaatattgtgcatgcatcatca |
100 |
Q |
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| T |
5737215 |
aaggtccatgacttcacacctctttaaagcaaagtaaaattgatagataaattggttgtaatctcaaatgtccaaaagcaatattgtgcatgcatcatca |
5737314 |
T |
|
| Q |
101 |
caacccacaacaggcaagctgcaggtatacattaacactttggctaaatttcacctaaaacggtacgaacttaaaatttggggacccta |
189 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5737315 |
caacccacaacaggcaagctgcaggtatacattaacactttggctaaatttcacctaaaacggtacgaacttaaaatttggggacccta |
5737403 |
T |
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