View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16835_high_1 (Length: 596)

Name: NF16835_high_1
Description: NF16835
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16835_high_1
NF16835_high_1
[»] chr3 (53 HSPs)
chr3 (1-564)||(50271338-50271909)
chr3 (378-492)||(49429454-49429568)
chr3 (377-500)||(166780-166904)
chr3 (379-500)||(27394502-27394623)
chr3 (376-500)||(33528184-33528309)
chr3 (378-503)||(45431620-45431746)
chr3 (374-482)||(29226315-29226424)
chr3 (377-500)||(11483605-11483729)
chr3 (129-257)||(53705849-53705977)
chr3 (372-482)||(50381701-50381812)
chr3 (375-500)||(50676846-50676972)
chr3 (389-500)||(1102675-1102787)
chr3 (144-252)||(1183119-1183227)
chr3 (176-248)||(3941673-3941745)
chr3 (378-482)||(46247253-46247361)
chr3 (378-500)||(46798575-46798698)
chr3 (378-416)||(2259150-2259188)
chr3 (375-492)||(9489467-9489585)
chr3 (378-416)||(30162650-30162688)
chr3 (391-500)||(37756392-37756502)
chr3 (379-416)||(25165434-25165471)
chr3 (380-500)||(47864631-47864752)
chr3 (378-500)||(27817047-27817169)
chr3 (385-500)||(38414884-38414999)
chr3 (381-500)||(39739270-39739390)
chr3 (390-442)||(43527815-43527867)
chr3 (425-500)||(29645806-29645881)
chr3 (378-417)||(32421341-32421380)
chr3 (377-416)||(34225187-34225226)
chr3 (394-500)||(48717422-48717529)
chr3 (449-500)||(54457218-54457269)
chr3 (378-416)||(55426107-55426145)
chr3 (149-253)||(23195623-23195727)
chr3 (378-414)||(36590383-36590419)
chr3 (436-500)||(43897654-43897718)
chr3 (449-500)||(8930956-8931007)
chr3 (394-497)||(24651134-24651237)
chr3 (135-234)||(30843626-30843725)
chr3 (373-411)||(7239794-7239832)
chr3 (375-482)||(9624973-9625081)
chr3 (167-257)||(26499839-26499929)
chr3 (129-215)||(34979115-34979201)
chr3 (379-416)||(7517934-7517971)
chr3 (159-252)||(14984517-14984610)
chr3 (376-482)||(27183678-27183785)
chr3 (426-483)||(31419625-31419682)
chr3 (411-500)||(40412294-40412383)
chr3 (163-252)||(40954454-40954543)
chr3 (379-459)||(46795921-46796001)
chr3 (378-414)||(1084094-1084130)
chr3 (452-500)||(1325310-1325358)
chr3 (163-235)||(21568416-21568488)
chr3 (378-445)||(45118637-45118704)
[»] chr2 (37 HSPs)
chr2 (378-482)||(43684272-43684376)
chr2 (378-482)||(24202143-24202248)
chr2 (379-500)||(43027149-43027271)
chr2 (138-252)||(21603501-21603615)
chr2 (399-500)||(37886204-37886305)
chr2 (143-247)||(15301494-15301598)
chr2 (380-500)||(29090411-29090531)
chr2 (394-500)||(42541165-42541271)
chr2 (378-421)||(41541574-41541617)
chr2 (381-500)||(18949664-18949783)
chr2 (374-500)||(27463506-27463632)
chr2 (379-488)||(33482633-33482743)
chr2 (378-482)||(20375586-20375691)
chr2 (381-445)||(32084841-32084906)
chr2 (138-262)||(19206394-19206518)
chr2 (436-500)||(37592201-37592265)
chr2 (437-500)||(5207145-5207208)
chr2 (373-416)||(34107483-34107526)
chr2 (379-418)||(38790143-38790182)
chr2 (382-416)||(16403522-16403556)
chr2 (374-416)||(41749936-41749978)
chr2 (141-210)||(12676474-12676543)
chr2 (378-482)||(20435774-20435879)
chr2 (385-482)||(25783211-25783308)
chr2 (379-416)||(31149165-31149202)
chr2 (142-250)||(6788314-6788422)
chr2 (389-479)||(1962830-1962921)
chr2 (377-416)||(11069409-11069448)
chr2 (378-500)||(12183714-12183837)
chr2 (385-500)||(31605499-31605614)
chr2 (378-416)||(25553209-25553247)
chr2 (375-503)||(19843339-19843468)
chr2 (161-250)||(30256205-30256294)
chr2 (384-500)||(33065236-33065353)
chr2 (141-210)||(33261004-33261073)
chr2 (377-482)||(29034968-29035074)
chr2 (378-414)||(40203345-40203381)
[»] chr4 (53 HSPs)
chr4 (378-500)||(37574266-37574388)
chr4 (379-503)||(38690660-38690785)
chr4 (138-252)||(14810266-14810380)
chr4 (129-252)||(17381452-17381575)
chr4 (138-257)||(40836721-40836840)
chr4 (381-500)||(16556447-16556567)
chr4 (385-500)||(13539819-13539933)
chr4 (376-471)||(34974693-34974788)
chr4 (381-483)||(43362164-43362267)
chr4 (378-500)||(46283115-46283238)
chr4 (129-215)||(38932756-38932842)
chr4 (399-493)||(44251313-44251407)
chr4 (164-234)||(46804937-46805007)
chr4 (379-482)||(40406957-40407062)
chr4 (376-503)||(29889754-29889882)
chr4 (376-416)||(51974738-51974778)
chr4 (376-482)||(56555538-56555646)
chr4 (158-249)||(48973308-48973399)
chr4 (129-215)||(13834408-13834494)
chr4 (129-210)||(4161827-4161908)
chr4 (435-500)||(25234837-25234902)
chr4 (129-210)||(46805834-46805915)
chr4 (376-479)||(2832071-2832175)
chr4 (135-215)||(8170900-8170980)
chr4 (159-215)||(31903362-31903418)
chr4 (378-500)||(50815700-50815823)
chr4 (377-416)||(27862895-27862934)
chr4 (449-500)||(35733439-35733490)
chr4 (377-416)||(49635424-49635463)
chr4 (399-500)||(2766737-2766839)
chr4 (378-416)||(41971363-41971401)
chr4 (376-482)||(9692953-9693060)
chr4 (141-257)||(11839861-11839977)
chr4 (142-242)||(24806642-24806742)
chr4 (381-500)||(26885379-26885499)
chr4 (381-417)||(39387474-39387510)
chr4 (385-500)||(49811387-49811502)
chr4 (138-262)||(50384506-50384629)
chr4 (377-416)||(8716454-8716493)
chr4 (158-257)||(9297461-9297560)
chr4 (391-497)||(32037573-32037680)
chr4 (381-416)||(36993037-36993072)
chr4 (449-500)||(49607615-49607666)
chr4 (164-215)||(51150956-51151007)
chr4 (378-416)||(13210228-13210266)
chr4 (378-416)||(23448966-23449004)
chr4 (382-416)||(35909093-35909127)
chr4 (389-418)||(9884829-9884858)
chr4 (129-214)||(28286403-28286487)
chr4 (376-416)||(8716545-8716585)
chr4 (449-497)||(22525453-22525501)
chr4 (376-416)||(43084438-43084478)
chr4 (378-445)||(55055913-55055980)
[»] chr7 (57 HSPs)
chr7 (376-500)||(5228062-5228186)
chr7 (373-500)||(14707281-14707408)
chr7 (378-500)||(15025149-15025272)
chr7 (402-482)||(10091454-10091534)
chr7 (377-482)||(40273813-40273919)
chr7 (385-502)||(46243291-46243409)
chr7 (378-502)||(37665737-37665862)
chr7 (378-500)||(24029978-24030100)
chr7 (378-500)||(48433689-48433812)
chr7 (385-482)||(44662460-44662558)
chr7 (381-493)||(20013578-20013690)
chr7 (394-482)||(20529906-20529994)
chr7 (385-500)||(23602274-23602390)
chr7 (382-498)||(48258165-48258281)
chr7 (385-500)||(9668795-9668909)
chr7 (394-500)||(10624777-10624882)
chr7 (382-482)||(12166079-12166180)
chr7 (164-257)||(39608431-39608524)
chr7 (376-416)||(23824655-23824695)
chr7 (378-484)||(33248797-33248904)
chr7 (375-416)||(44986584-44986625)
chr7 (377-500)||(46266660-46266784)
chr7 (129-252)||(12927654-12927777)
chr7 (378-500)||(26455984-26456107)
chr7 (381-416)||(27454007-27454042)
chr7 (449-500)||(32376504-32376555)
chr7 (378-416)||(3902337-3902375)
chr7 (136-250)||(5362332-5362446)
chr7 (378-416)||(36528283-36528321)
chr7 (382-416)||(42554631-42554665)
chr7 (149-210)||(1344444-1344505)
chr7 (368-500)||(26606088-26606221)
chr7 (378-482)||(31793461-31793566)
chr7 (177-234)||(32996366-32996423)
chr7 (379-416)||(42338311-42338348)
chr7 (373-445)||(46570005-46570078)
chr7 (377-413)||(1575686-1575722)
chr7 (377-480)||(8133794-8133898)
chr7 (377-417)||(8249697-8249737)
chr7 (381-417)||(10900070-10900106)
chr7 (390-500)||(28914856-28914968)
chr7 (378-430)||(32986339-32986391)
chr7 (425-500)||(4956071-4956146)
chr7 (385-483)||(29357801-29357899)
chr7 (161-252)||(32188124-32188215)
chr7 (385-416)||(38110246-38110277)
chr7 (376-482)||(46195909-46196016)
chr7 (141-215)||(5198022-5198096)
chr7 (129-163)||(39608572-39608606)
chr7 (386-482)||(6548709-6548805)
chr7 (385-418)||(9992610-9992643)
chr7 (176-257)||(26905116-26905197)
chr7 (377-414)||(28712360-28712397)
chr7 (167-215)||(3116914-3116962)
chr7 (379-446)||(19752973-19753040)
chr7 (381-417)||(25965742-25965778)
chr7 (137-209)||(39129054-39129126)
[»] chr1 (57 HSPs)
chr1 (138-257)||(6541096-6541213)
chr1 (378-485)||(35309718-35309825)
chr1 (394-500)||(2350354-2350460)
chr1 (389-500)||(19424050-19424162)
chr1 (378-500)||(34702292-34702415)
chr1 (376-500)||(43109217-43109342)
chr1 (385-500)||(22779223-22779339)
chr1 (379-482)||(24134621-24134725)
chr1 (381-500)||(7438617-7438737)
chr1 (376-500)||(12973257-12973382)
chr1 (378-482)||(50011500-50011605)
chr1 (376-482)||(8893851-8893958)
chr1 (380-502)||(17916702-17916821)
chr1 (378-500)||(29332279-29332400)
chr1 (376-482)||(44583579-44583685)
chr1 (376-417)||(39304266-39304307)
chr1 (385-500)||(35195590-35195706)
chr1 (381-500)||(40209894-40210014)
chr1 (381-492)||(46532482-46532594)
chr1 (378-500)||(4126892-4127015)
chr1 (375-503)||(25421844-25421974)
chr1 (135-234)||(36144970-36145069)
chr1 (378-500)||(49619965-49620088)
chr1 (378-416)||(27054683-27054721)
chr1 (376-416)||(2017748-2017788)
chr1 (138-241)||(5529783-5529886)
chr1 (378-500)||(24253622-24253745)
chr1 (149-252)||(34826964-34827067)
chr1 (378-413)||(35527568-35527603)
chr1 (381-416)||(47651868-47651903)
chr1 (382-500)||(10123032-10123150)
chr1 (378-416)||(15417881-15417919)
chr1 (378-416)||(15550879-15550917)
chr1 (378-416)||(35527399-35527437)
chr1 (374-416)||(50064999-50065041)
chr1 (435-500)||(52720735-52720800)
chr1 (381-480)||(23368731-23368831)
chr1 (176-252)||(38267313-38267389)
chr1 (378-500)||(40061436-40061559)
chr1 (385-417)||(40513237-40513269)
chr1 (381-500)||(48497192-48497312)
chr1 (379-414)||(16985992-16986027)
chr1 (378-417)||(48813727-48813766)
chr1 (376-414)||(4684243-4684281)
chr1 (129-215)||(8069075-8069161)
chr1 (381-482)||(14262718-14262820)
chr1 (378-416)||(22386300-22386338)
chr1 (384-500)||(30735827-30735944)
chr1 (379-456)||(35605618-35605695)
chr1 (435-485)||(47428889-47428939)
chr1 (129-215)||(50155714-50155800)
chr1 (376-417)||(2465996-2466037)
chr1 (129-210)||(9890601-9890682)
chr1 (129-186)||(27900871-27900928)
chr1 (376-482)||(39238707-39238814)
chr1 (404-500)||(42946446-42946543)
chr1 (385-473)||(52426891-52426979)
[»] chr8 (32 HSPs)
chr8 (378-493)||(17855643-17855758)
chr8 (385-500)||(39172192-39172307)
chr8 (376-482)||(41454824-41454931)
chr8 (376-482)||(32822107-32822213)
chr8 (383-500)||(10621354-10621472)
chr8 (379-482)||(1032564-1032668)
chr8 (389-500)||(19957300-19957412)
chr8 (149-252)||(33508584-33508687)
chr8 (376-485)||(41845423-41845533)
chr8 (377-500)||(44828411-44828536)
chr8 (378-488)||(19733060-19733171)
chr8 (374-464)||(23139063-23139154)
chr8 (376-482)||(38289232-38289339)
chr8 (129-215)||(1249216-1249302)
chr8 (378-416)||(13906690-13906728)
chr8 (374-416)||(30466668-30466710)
chr8 (376-500)||(38063968-38064093)
chr8 (377-500)||(4259851-4259975)
chr8 (384-482)||(11052581-11052680)
chr8 (378-416)||(10161957-10161995)
chr8 (382-482)||(22652680-22652781)
chr8 (449-485)||(11690948-11690984)
chr8 (163-215)||(21600517-21600569)
chr8 (378-418)||(31220337-31220377)
chr8 (449-492)||(8145838-8145881)
chr8 (375-417)||(40444695-40444737)
chr8 (386-416)||(43456716-43456746)
chr8 (382-482)||(10201259-10201360)
chr8 (155-252)||(42659910-42660007)
chr8 (138-234)||(2986969-2987065)
chr8 (176-252)||(7604021-7604097)
chr8 (376-416)||(29114093-29114133)
[»] chr6 (27 HSPs)
chr6 (389-500)||(7164699-7164810)
chr6 (377-500)||(6228239-6228363)
chr6 (374-500)||(4854285-4854412)
chr6 (397-480)||(9455852-9455935)
chr6 (378-500)||(18903346-18903469)
chr6 (407-503)||(32344662-32344758)
chr6 (378-416)||(15717077-15717115)
chr6 (380-417)||(17216953-17216990)
chr6 (379-482)||(20415559-20415663)
chr6 (378-446)||(24466825-24466893)
chr6 (449-500)||(5641669-5641720)
chr6 (138-257)||(10067617-10067737)
chr6 (426-482)||(11611411-11611467)
chr6 (376-416)||(18618603-18618643)
chr6 (384-416)||(24794959-24794991)
chr6 (378-482)||(14981699-14981804)
chr6 (382-413)||(25045737-25045768)
chr6 (164-215)||(31142032-31142083)
chr6 (149-215)||(6699489-6699555)
chr6 (129-215)||(25085024-25085110)
chr6 (382-423)||(4096621-4096661)
chr6 (164-257)||(16431554-16431647)
chr6 (379-416)||(21874285-21874322)
chr6 (381-414)||(30422174-30422207)
chr6 (377-482)||(9064858-9064964)
chr6 (159-215)||(9307403-9307459)
chr6 (388-416)||(19748102-19748130)
[»] chr5 (28 HSPs)
chr5 (376-500)||(38503236-38503361)
chr5 (379-482)||(31250141-31250245)
chr5 (385-500)||(20191442-20191557)
chr5 (129-252)||(27001197-27001320)
chr5 (379-482)||(43227860-43227964)
chr5 (394-500)||(34729481-34729587)
chr5 (378-482)||(4395848-4395953)
chr5 (375-500)||(3294073-3294199)
chr5 (377-500)||(15470600-15470724)
chr5 (449-500)||(15680880-15680931)
chr5 (378-416)||(12375476-12375514)
chr5 (375-416)||(87781-87822)
chr5 (378-442)||(31991798-31991863)
chr5 (376-416)||(1984253-1984293)
chr5 (149-205)||(9572648-9572704)
chr5 (384-416)||(17077360-17077392)
chr5 (138-257)||(26675094-26675212)
chr5 (138-257)||(26946702-26946820)
chr5 (164-215)||(27769886-27769937)
chr5 (377-416)||(43263205-43263244)
chr5 (164-210)||(296415-296461)
chr5 (166-252)||(8206195-8206281)
chr5 (378-416)||(13576316-13576354)
chr5 (435-488)||(38435970-38436023)
chr5 (385-417)||(1931840-1931872)
chr5 (428-468)||(2058264-2058304)
chr5 (456-500)||(12256475-12256519)
chr5 (381-413)||(42208913-42208945)
[»] scaffold0005 (1 HSPs)
scaffold0005 (138-252)||(29348-29462)
[»] scaffold0001 (1 HSPs)
scaffold0001 (378-500)||(419705-419828)
[»] scaffold0002 (1 HSPs)
scaffold0002 (142-252)||(349098-349208)
[»] scaffold0045 (1 HSPs)
scaffold0045 (164-251)||(20651-20737)
[»] scaffold0054 (1 HSPs)
scaffold0054 (388-501)||(22462-22576)
[»] scaffold0018 (1 HSPs)
scaffold0018 (378-416)||(121863-121901)
[»] scaffold0011 (1 HSPs)
scaffold0011 (401-485)||(15325-15409)
[»] scaffold0308 (1 HSPs)
scaffold0308 (378-482)||(7069-7174)
[»] scaffold0687 (1 HSPs)
scaffold0687 (176-252)||(1705-1781)


Alignment Details
Target: chr3 (Bit Score: 379; Significance: 0; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 379; E-Value: 0
Query Start/End: Original strand, 1 - 564
Target Start/End: Original strand, 50271338 - 50271909
Alignment:
Q  1 aagaaagaagacgcattagaagagaatagtaacctaaccatgatgatgatcataatctcataacccatagaattcgtgcgtggcatgtgaaagaacaata 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50271338 aagaaagaagacgcattagaagagaatagtaacctaaccatgatgatgatcataatctcataacccatagaattcgtgcgtggcatgtgaaagaacaata 50271437  T
Q  101 gcactttgatctataagaatttcaaaata--------ttgtacaatttgttagtcgaaataatctttgacgttaaaatatttgattaatattgtcttatc 192  Q
    ||||||| ||||||  |||||| ||||||        ||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  50271438 gcacttttatctatcggaattttaaaatagtctctatttgtacactttgttagtcgaaataatctctgacgttaaaatatttggttaatattgtcttatc 50271537  T
Q  193 agttcttcaatatacttacttatcatcttattagtccttatatatacttacttattgtcacttcattctcaaaaaagtcatttcaagtatcgagagataa 292  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||| |||||||| ||||||||||| ||||||| |    
T  50271538 agttcttcaatatacttacttatcatcttattagtccttatatgtacttacttattatcatttcattctgaaaaaagttatttcaagtattgagagatta 50271637  T
Q  293 tttatgtgtcaaagacnnnnnnnactaacaaagggcataaacatgactatgttaaaattttgatacatttaaagactacgtaattgtccccatgagctta 392  Q
    |||||| |||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50271638 tttatgagtcaaagactttttttactaacaaagggcataaacatgactatgttaaaattttgatacatttaaagactacgtaattgtccccatgagctta 50271737  T
Q  393 gctcatttggtaagggataatgcatttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttctttaaccgcta 492  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||||||||  |||| |||| |||||||||||||| |||||||||| |||||||||    
T  50271738 gctcatttggtaagagataatgcatttgtatgcaggggccgtggttcgaaccccgtacatcccacttattcacctttaaggtgaatttctctaaccgcta 50271837  T
Q  493 gactacttaactnnnnnnnnncctatcataactactgcttatatattcaagatgaaaatgactattaaccct 564  Q
    |||||||| |||           ||||||||||| |||||||||||||  ||||||||||||||||||||||    
T  50271838 gactacttgactgaaaaaaaaaatatcataactaatgcttatatattccggatgaaaatgactattaaccct 50271909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 378 - 492
Target Start/End: Original strand, 49429454 - 49429568
Alignment:
Q  378 gtccccatgagcttagctcatttggtaagggataatgcatttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaa 477  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| ||||| ||  |||||||||||   |||||||| |||||||||||||| |||||    
T  49429454 gtccccatgagcttaactcatttggtaagggataatgcatttgtatgcagggaccagggttcgaaccccggacaccccacttattcacctttaaggtgaa 49429553  T
Q  478 tttctttaaccgcta 492  Q
    ||||| || ||||||    
T  49429554 tttctctagccgcta 49429568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 377 - 500
Target Start/End: Original strand, 166780 - 166904
Alignment:
Q  377 tgtccccatgagcttagctcatttggtaagggataatgcatt-tgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtg 475  Q
    ||||||| ||||||||||||| |||||||||||||||||||  | ||| ||||||||| ||||||||||| | ||||| || |||||||||||||| |||    
T  166780 tgtccccgtgagcttagctcacttggtaagggataatgcataatttatgcaggggccggggttcgaaccccagacacctcacttattcacctttaaagtg 166879  T
Q  476 aatttctttaaccgctagactactt 500  Q
    |||||||||| ||||||| ||||||    
T  166880 aatttctttagccgctaggctactt 166904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 379 - 500
Target Start/End: Original strand, 27394502 - 27394623
Alignment:
Q  379 tccccatgagcttagctcatttggtaagggataatgcatttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaat 478  Q
    ||||| |||||| |||||| ||||||||||||||||||||| ||| ||||||| | |||| ||||||   |||||||| |||||||||||||| ||||||    
T  27394502 tccccgtgagctaagctcacttggtaagggataatgcatttatatgcaggggctggggtttgaaccccggacaccccacttattcacctttaaggtgaat 27394601  T
Q  479 ttctttaaccgctagactactt 500  Q
    |||| || ||||||| ||||||    
T  27394602 ttctctagccgctaggctactt 27394623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 376 - 500
Target Start/End: Complemental strand, 33528309 - 33528184
Alignment:
Q  376 ttgtccccatgagcttagctcatttggtaagggataatgc---atttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaat 472  Q
    ||||||||||||||||||||||||||||||||||||||||   |||||  | ||||||| | ||||||||||| | |||||||| ||||||| ||||||     
T  33528309 ttgtccccatgagcttagctcatttggtaagggataatgcacaatttg--tgcaggggctggggttcgaaccccagacaccccacttattcatctttaag 33528212  T
Q  473 gtgaatttctttaaccgctagactactt 500  Q
    |||||||||| || || |||| ||||||    
T  33528211 gtgaatttctctagccactaggctactt 33528184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 378 - 503
Target Start/End: Original strand, 45431620 - 45431746
Alignment:
Q  378 gtccccatgagcttagctcatttggtaagggataatgcat-ttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtga 476  Q
    |||||||||||||||||||| ||||||||||||||||| | || ||| |||||| |  |||||||||||   |||||||| |||||||||||||| ||||    
T  45431620 gtccccatgagcttagctcacttggtaagggataatgcgtattttatgcaggggtcagggttcgaaccccggacaccccacttattcacctttaaggtga 45431719  T
Q  477 atttctttaaccgctagactacttaac 503  Q
    |||||  || ||||||| |||||||||    
T  45431720 atttccctagccgctaggctacttaac 45431746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 374 - 482
Target Start/End: Original strand, 29226315 - 29226424
Alignment:
Q  374 aattgtccccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaat 472  Q
    |||| ||||||||||||||||||||||||||||||||||  ||   | | | ||||||||| |||||||||||  ||||||||| ||||||| ||||||     
T  29226315 aattatccccatgagcttagctcatttggtaagggataacacacaatatgtgcaggggccggggttcgaaccccgtacaccccacttattcatctttaag 29226414  T
Q  473 gtgaatttct 482  Q
    ||||||||||    
T  29226415 gtgaatttct 29226424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 377 - 500
Target Start/End: Original strand, 11483605 - 11483729
Alignment:
Q  377 tgtccccatgagcttagctcatttggtaagggataatgc-atttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtg 475  Q
    ||||||||||||||||||||||||||||||||||||||| |  | | | ||||||||  ||||||||| |   |||||||| ||||||| |||||| |||    
T  11483605 tgtccccatgagcttagctcatttggtaagggataatgcaaaatatgtgcaggggccagggttcgaactccggacaccccacttattcatctttaaggtg 11483704  T
Q  476 aatttctttaaccgctagactactt 500  Q
    ||||||| || |  |||||||||||    
T  11483705 aatttctctagcaactagactactt 11483729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 129 - 257
Target Start/End: Complemental strand, 53705977 - 53705849
Alignment:
Q  129 attgtacaatttgttagtcgaaataatctttgacgttaaaatatttgattaatattgtcttatcagttcttcaatatacttacttatcatcttattagtc 228  Q
    ||||| || ||||| |||| ||||||||| |  | |||||||| ||  ||||||||||| ||| |||| ||||||||||||||||||| |  ||| ||||    
T  53705977 attgtgcactttgtcagtcaaaataatctctcgcattaaaatactttgttaatattgtcatattagttattcaatatacttacttatcgttgtatcagtc 53705878  T
Q  229 cttatatatacttacttattgtcacttca 257  Q
    |||||| ||||||||||| ||||| ||||    
T  53705877 cttataaatacttacttaatgtcatttca 53705849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 372 - 482
Target Start/End: Original strand, 50381701 - 50381812
Alignment:
Q  372 gtaattgtccccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcaccttta 470  Q
    |||| |||||||||||||||| |||||||||||||||||||||||   | ||| |||||| || |||||||| ||   |||||||| ||||||| |||||    
T  50381701 gtaaatgtccccatgagcttaactcatttggtaagggataatgcacaatatatgcaggggtcggggttcgaatcccggacaccccacttattcatcttta 50381800  T
Q  471 atgtgaatttct 482  Q
    | ||||||||||    
T  50381801 aggtgaatttct 50381812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 375 - 500
Target Start/End: Complemental strand, 50676972 - 50676846
Alignment:
Q  375 attgtccccatgagcttagctcatttggtaagggataatgcat-ttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatg 473  Q
    |||||| ||||||| ||| |||| ||||||||||| ||| ||| || |||  |||||  | |||||||||||   |||||||| |||||||||||||| |    
T  50676972 attgtctccatgagtttaactcacttggtaagggacaatacatattatatgtaggggttggggttcgaaccccgaacaccccacttattcacctttaagg 50676873  T
Q  474 tgaatttctttaaccgctagactactt 500  Q
    ||||||||| ||||| |||||||||||    
T  50676872 tgaatttctctaaccactagactactt 50676846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 389 - 500
Target Start/End: Complemental strand, 1102787 - 1102675
Alignment:
Q  389 cttagctcatttggtaagggataatgcatt-tgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttctttaac 487  Q
    |||||||||  ||||||||||||||||||  | ||| |||||| ||  ||||||||| |  |||||||| |||||||||||||| |||||||||| || |    
T  1102787 cttagctcacctggtaagggataatgcataatttatgcaggggacggagttcgaaccatggacaccccacttattcacctttaaggtgaatttctctagc 1102688  T
Q  488 cgctagactactt 500  Q
    |||||| ||||||    
T  1102687 cgctaggctactt 1102675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 144 - 252
Target Start/End: Complemental strand, 1183227 - 1183119
Alignment:
Q  144 agtcgaaataatctttgacgttaaaatatttgattaatattgtcttatcagttcttcaatatacttacttatcatcttattagtccttatatatacttac 243  Q
    |||| ||||| |||||||  ||||||||||| | |||||||||| |||||||  |||||||||  |||||||  || ||| ||||||||||  |||||||    
T  1183227 agtcaaaatagtctttgatattaaaatatttcactaatattgtcatatcagtcattcaatatatgtacttattgtcatatcagtccttataagtacttac 1183128  T
Q  244 ttattgtca 252  Q
    |||||||||    
T  1183127 ttattgtca 1183119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 176 - 248
Target Start/End: Original strand, 3941673 - 3941745
Alignment:
Q  176 attaatattgtcttatcagttcttcaatatacttacttatcatcttattagtccttatatatacttacttatt 248  Q
    |||||||||||| ||| ||| ||||||||||| ||||||| ||| ||| |||| |||||||||||||||||||    
T  3941673 attaatattgtcatattagtccttcaatatacctacttattatcatatcagtcgttatatatacttacttatt 3941745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 378 - 482
Target Start/End: Original strand, 46247253 - 46247361
Alignment:
Q  378 gtccccatgagcttagctcatttggtaagggataatgc---atttgtatccaggggccgtggttcgaaccctatacacccca---tttattcacctttaa 471  Q
    ||||||||||||||||||||||||||||||||||||||   |||||  | ||||||| | ||||||||||| | ||||||||    ||||||| ||||||    
T  46247253 gtccccatgagcttagctcatttggtaagggataatgcacaatttg--tgcaggggctggggttcgaaccccagacaccccacttcttattcatctttaa 46247350  T
Q  472 tgtgaatttct 482  Q
     ||||||||||    
T  46247351 ggtgaatttct 46247361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 378 - 500
Target Start/End: Original strand, 46798575 - 46798698
Alignment:
Q  378 gtccccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtga 476  Q
    ||||||||||||||| |||||||||| ||||||||||||   | | | ||||||||| | ||||||||||  |||||||| ||||||| |||||| ||      
T  46798575 gtccccatgagcttaactcatttggtgagggataatgcacaatatgtgcaggggccgggattcgaaccctggacaccccacttattcatctttaaggtag 46798674  T
Q  477 atttctttaaccgctagactactt 500  Q
    |||||| ||||| |||| ||||||    
T  46798675 atttctctaaccactaggctactt 46798698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 378 - 416
Target Start/End: Original strand, 2259150 - 2259188
Alignment:
Q  378 gtccccatgagcttagctcatttggtaagggataatgca 416  Q
    |||||||||||||||||||||||||||||||||||||||    
T  2259150 gtccccatgagcttagctcatttggtaagggataatgca 2259188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 375 - 492
Target Start/End: Original strand, 9489467 - 9489585
Alignment:
Q  375 attgtccccatgagcttagctcatttggtaagggataatgcatt-tgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatg 473  Q
    ||||||| | |||| |||||||  |||||||||||||||||||| ||||| ||||||||| ||||||||||||  | |||| | |  |||||||||||      
T  9489467 attgtcctcgtgagtttagctcgcttggtaagggataatgcattatgtatgcaggggccggggttcgaaccctggataccctactatttcacctttaaga 9489566  T
Q  474 tgaatttctttaaccgcta 492  Q
    ||||||||| | |||||||    
T  9489567 tgaatttctctgaccgcta 9489585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 378 - 416
Target Start/End: Original strand, 30162650 - 30162688
Alignment:
Q  378 gtccccatgagcttagctcatttggtaagggataatgca 416  Q
    |||||||||||||||||||||||||||||||||||||||    
T  30162650 gtccccatgagcttagctcatttggtaagggataatgca 30162688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 391 - 500
Target Start/End: Complemental strand, 37756502 - 37756392
Alignment:
Q  391 tagctcatttggtaagggataatgcatt-tgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttctttaaccg 489  Q
    ||||||| ||| |||||||||||||||  | ||| ||||||| | ||||||||||| | |||||||| |||||||||||||| |||| ||||| |  |||    
T  37756502 tagctcacttgataagggataatgcataatttatgcaggggctggggttcgaaccccaaacaccccacttattcacctttaacgtgagtttctctcgccg 37756403  T
Q  490 ctagactactt 500  Q
    |||| ||||||    
T  37756402 ctaggctactt 37756392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 379 - 416
Target Start/End: Original strand, 25165434 - 25165471
Alignment:
Q  379 tccccatgagcttagctcatttggtaagggataatgca 416  Q
    ||||||||||||||||||||||||||||||||||||||    
T  25165434 tccccatgagcttagctcatttggtaagggataatgca 25165471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 380 - 500
Target Start/End: Original strand, 47864631 - 47864752
Alignment:
Q  380 ccccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaat 478  Q
    |||||| ||||||||||||||||||||||||||||||   | | | ||||||  | |||||||||||   |||||||| ||||||| |||||| ||||||    
T  47864631 ccccataagcttagctcatttggtaagggataatgcacaatatgtgcaggggttggggttcgaaccccggacaccccacttattcatctttaaggtgaat 47864730  T
Q  479 ttctttaaccgctagactactt 500  Q
    |||| || || |||| ||||||    
T  47864731 ttctctagccactaggctactt 47864752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 500
Target Start/End: Complemental strand, 27817169 - 27817047
Alignment:
Q  378 gtccccatgagcttagctcatttggtaagggataatgc---atttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgt 474  Q
    ||||| ||||||||| ||||||||||||||||||||||   |||||  | |||||||||  ||||||||||   |||||||||||||||| ||||||  |    
T  27817169 gtccctatgagcttacctcatttggtaagggataatgcacaatttg--tgcaggggccggagttcgaaccc-ggacaccccatttattcatctttaagtt 27817073  T
Q  475 gaatttctttaaccgctagactactt 500  Q
    |||||||| || || |||| ||||||    
T  27817072 gaatttctctagccactaggctactt 27817047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 385 - 500
Target Start/End: Original strand, 38414884 - 38414999
Alignment:
Q  385 tgagcttagctcatttggtaagggataatgcat-ttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttctt 483  Q
    |||||||||| || ||||||||||||||||||| || ||| |||||| |  |||| |||| ||  |||||||| |||||||||||||| ||||||||||     
T  38414884 tgagcttagc-cacttggtaagggataatgcatattatatgcaggggtcagggtttgaactctgaacaccccacttattcacctttaaggtgaatttctc 38414982  T
Q  484 taaccgctagactactt 500  Q
    |  ||||||| ||||||    
T  38414983 tggccgctaggctactt 38414999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 381 - 500
Target Start/End: Original strand, 39739270 - 39739390
Alignment:
Q  381 cccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatt 479  Q
    ||||||||||||||||||||||||||||||||||||   | | | |||||   | |||||||||||   ||||| || ||||||| |||||| |||||||    
T  39739270 cccatgagcttagctcatttggtaagggataatgcacaatatgtgcagggattggggttcgaaccccggacacctcacttattcatctttaaggtgaatt 39739369  T
Q  480 tctttaaccgctagactactt 500  Q
    ||| || || |||||||||||    
T  39739370 tctctagccactagactactt 39739390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 390 - 442
Target Start/End: Original strand, 43527815 - 43527867
Alignment:
Q  390 ttagctcatttggtaagggataatgcatttgtatccaggggccgtggttcgaa 442  Q
    |||||||||||||||||||||||||||||||||| || || ||| ||||||||    
T  43527815 ttagctcatttggtaagggataatgcatttgtatgcacggaccggggttcgaa 43527867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 425 - 500
Target Start/End: Complemental strand, 29645881 - 29645806
Alignment:
Q  425 caggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttctttaaccgctagactactt 500  Q
    ||||||||| |||||||||||   |||||||| ||||||| |||||| |||||||||| || || |||||||||||    
T  29645881 caggggccggggttcgaaccccggacaccccacttattcatctttaaggtgaatttctctagccactagactactt 29645806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 378 - 417
Target Start/End: Original strand, 32421341 - 32421380
Alignment:
Q  378 gtccccatgagcttagctcatttggtaagggataatgcat 417  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  32421341 gtccccatgagcttagctcatctggtaagggataatgcat 32421380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 377 - 416
Target Start/End: Original strand, 34225187 - 34225226
Alignment:
Q  377 tgtccccatgagcttagctcatttggtaagggataatgca 416  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  34225187 tgtctccatgagcttagctcatttggtaagggataatgca 34225226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 394 - 500
Target Start/End: Original strand, 48717422 - 48717529
Alignment:
Q  394 ctcatttggtaagggataatgcatt-tgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttctttaaccgcta 492  Q
    |||||||||||||| ||||| |||| ||||| ||||||  | ||||||||||| | |||||||| || |||| |||||| ||||||||||  | ||||||    
T  48717422 ctcatttggtaaggaataatacattatgtatgcaggggtaggggttcgaaccccaaacaccccactttttcatctttaaggtgaatttctccagccgcta 48717521  T
Q  493 gactactt 500  Q
     |||||||    
T  48717522 aactactt 48717529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 449 - 500
Target Start/End: Original strand, 54457218 - 54457269
Alignment:
Q  449 acaccccatttattcacctttaatgtgaatttctttaaccgctagactactt 500  Q
    ||||||||||||||||||||||| |||||||||| || ||||||| ||||||    
T  54457218 acaccccatttattcacctttaaggtgaatttctctagccgctaggctactt 54457269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 378 - 416
Target Start/End: Original strand, 55426107 - 55426145
Alignment:
Q  378 gtccccatgagcttagctcatttggtaagggataatgca 416  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  55426107 gtccccatgagcttagctcatttggtaaaggataatgca 55426145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 149 - 253
Target Start/End: Complemental strand, 23195727 - 23195623
Alignment:
Q  149 aaataatctttgacgttaaaatatttgattaatattgtcttatcagttcttcaatatacttacttatcatcttattagtccttatatatacttacttatt 248  Q
    ||||| ||| |||| ||||| |||||  ||||||||||| ||| |||  ||||||||||||| ||||  || ||| ||||||| || ||| |||||||||    
T  23195727 aaatagtctatgacattaaagtatttcgttaatattgtcatattagtctttcaatatacttaattattgtcatatcagtccttttaaatatttacttatt 23195628  T
Q  249 gtcac 253  Q
    |||||    
T  23195627 gtcac 23195623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 378 - 414
Target Start/End: Original strand, 36590383 - 36590419
Alignment:
Q  378 gtccccatgagcttagctcatttggtaagggataatg 414  Q
    ||||||||||| |||||||||||||||||||||||||    
T  36590383 gtccccatgagattagctcatttggtaagggataatg 36590419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 436 - 500
Target Start/End: Original strand, 43897654 - 43897718
Alignment:
Q  436 gttcgaaccctatacaccccatttattcacctttaatgtgaatttctttaaccgctagactactt 500  Q
    |||||||||  | |||||||| |||||||||||||| |||||||||| |||||| ||| ||||||    
T  43897654 gttcgaacctcagacaccccacttattcacctttaaggtgaatttctctaaccgttaggctactt 43897718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 449 - 500
Target Start/End: Complemental strand, 8931007 - 8930956
Alignment:
Q  449 acaccccatttattcacctttaatgtgaatttctttaaccgctagactactt 500  Q
    |||||||| |||||||||||||| |||||||||| || ||||||| ||||||    
T  8931007 acaccccacttattcacctttaaagtgaatttctctagccgctaggctactt 8930956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 497
Target Start/End: Original strand, 24651134 - 24651237
Alignment:
Q  394 ctcatttggtaagggataatgcatttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttctttaaccgctag 493  Q
    |||| ||||||| ||||||||| | | ||| || ||| || | ||||||||| | | ||| || |||||||||||||| |||||||||| |||||||| |    
T  24651134 ctcacttggtaaaggataatgcgtatatatgcaagggtcgagattcgaaccccagatacctcacttattcacctttaaggtgaatttctctaaccgctgg 24651233  T
Q  494 acta 497  Q
    ||||    
T  24651234 acta 24651237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 135 - 234
Target Start/End: Original strand, 30843626 - 30843725
Alignment:
Q  135 caatttgttagtcgaaataatctttgacgttaaaatatttgattaatattgtcttatcagttcttcaatatacttacttatcatcttattagtccttata 234  Q
    |||||||||||| |||||| ||  ||| ||||||||  || |||||||||||| ||| |||  ||||||||||||| ||||  || ||| ||||||||||    
T  30843626 caatttgttagttgaaatagtccatgatgttaaaatgcttcattaatattgtcatattagtctttcaatatacttatttattgtcatatcagtccttata 30843725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 373 - 411
Target Start/End: Original strand, 7239794 - 7239832
Alignment:
Q  373 taattgtccccatgagcttagctcatttggtaagggata 411  Q
    ||||||||||| ||||||||| |||||||||||||||||    
T  7239794 taattgtccccgtgagcttagttcatttggtaagggata 7239832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 375 - 482
Target Start/End: Original strand, 9624973 - 9625081
Alignment:
Q  375 attgtccccatgagcttagctcatttggtaagggataatgcatt--tgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaat 472  Q
    ||||||||| ||||| ||||||| |||| | |||| ||||||||  | ||| ||||||||| |||||||||||   |||||||| |||||||| || ||     
T  9624973 attgtccccgtgagcatagctcagttggca-gggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcactttaaaa 9625071  T
Q  473 gtgaatttct 482  Q
    ||||||||||    
T  9625072 gtgaatttct 9625081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 167 - 257
Target Start/End: Original strand, 26499839 - 26499929
Alignment:
Q  167 aaatatttgattaatattgtcttatcagttcttcaatatacttacttatcatcttattagtccttatatatacttacttattgtcacttca 257  Q
    ||||| || ||||||||| || |||||||  ||||||||||||| |||| ||| ||| ||||||| ||  |||||||||||| ||| ||||    
T  26499839 aaatacttcattaatattttcatatcagtcattcaatatacttatttattatcatatcagtccttctaagtacttacttattatcatttca 26499929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 129 - 215
Target Start/End: Complemental strand, 34979201 - 34979115
Alignment:
Q  129 attgtacaatttgttagtcgaaataatctttgacgttaaaatatttgattaatattgtcttatcagttcttcaatatacttacttat 215  Q
    ||||| || |||||||||| ||||| ||| | || |||||||||||  |||||||| || ||| |||  ||||||||||||||||||    
T  34979201 attgtgcattttgttagtcaaaatagtctctcacattaaaatatttcgttaatattatcatattagtcattcaatatacttacttat 34979115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 416
Target Start/End: Original strand, 7517934 - 7517971
Alignment:
Q  379 tccccatgagcttagctcatttggtaagggataatgca 416  Q
    ||||||| ||||||||||||||||||||||||| ||||    
T  7517934 tccccattagcttagctcatttggtaagggatattgca 7517971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 252
Target Start/End: Original strand, 14984517 - 14984610
Alignment:
Q  159 tgacgttaaaatatttgattaatattgtcttatcagttcttcaatatacttacttatcatcttattagtccttatatatacttacttattgtca 252  Q
    |||| |||||||||||  ||||||||||| ||| | | ||||||||||||| |||||  || ||| ||||||| ||  |||||| |||||||||    
T  14984517 tgacattaaaatatttcgttaatattgtcatattaatccttcaatatacttgcttattgtcatatgagtccttttaagtacttatttattgtca 14984610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 482
Target Start/End: Complemental strand, 27183785 - 27183678
Alignment:
Q  376 ttgtccccatgagcttagctcatttggtaagggataatgcatt--tgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatg 473  Q
    |||||||| ||||| ||||||| |||| | |||| ||||||||  | ||| ||||||||| |||||||||||   |||||||| |||||||| || || |    
T  27183785 ttgtccccgtgagcatagctcagttggca-gggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcactttaaaag 27183687  T
Q  474 tgaatttct 482  Q
    |||||||||    
T  27183686 tgaatttct 27183678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 426 - 483
Target Start/End: Original strand, 31419625 - 31419682
Alignment:
Q  426 aggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttctt 483  Q
    |||||| | ||||||||||| | |||||||| ||||||||||| || |||||||||||    
T  31419625 aggggctggggttcgaaccccaaacaccccacttattcaccttaaaagtgaatttctt 31419682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 411 - 500
Target Start/End: Original strand, 40412294 - 40412383
Alignment:
Q  411 aatgcatttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttctttaaccgctagactactt 500  Q
    ||||||||| ||| ||| || || |||||||||  |  ||| |||| |||||||||||||| |||||||||| |||||| |||| |||||    
T  40412294 aatgcatttatatgcagaggtcggggttcgaactttggacatcccacttattcacctttaaagtgaatttctctaaccgttagagtactt 40412383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 252
Target Start/End: Complemental strand, 40954543 - 40954454
Alignment:
Q  163 gttaaaatatttgattaatattgtcttatcagttcttcaatatacttacttatcatcttattagtccttatatatacttacttattgtca 252  Q
    ||||||||| ||  ||||||||||| ||| |||  ||||||||||||||||||  || ||||| |||||||   || |||||||||||||    
T  40954543 gttaaaataattttttaatattgtcatattagtgtttcaatatacttacttattgtcatattaatccttatgagtagttacttattgtca 40954454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 459
Target Start/End: Complemental strand, 46796001 - 46795921
Alignment:
Q  379 tccccatgagcttagctcatttggtaagggataatgcatttg-tatccaggggccgtggttcgaaccctatacaccccattt 459  Q
    ||||| ||||||||||||| |||||| |||||| |||||||  ||| ||||||||| ||||||||||||  |||| ||||||    
T  46796001 tccccgtgagcttagctcagttggta-gggatattgcattttatatgcaggggccggggttcgaaccctgaacactccattt 46795921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 378 - 414
Target Start/End: Complemental strand, 1084130 - 1084094
Alignment:
Q  378 gtccccatgagcttagctcatttggtaagggataatg 414  Q
    |||||||||||||||||||||||| ||| ||||||||    
T  1084130 gtccccatgagcttagctcatttgttaaaggataatg 1084094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 452 - 500
Target Start/End: Complemental strand, 1325358 - 1325310
Alignment:
Q  452 ccccatttattcacctttaatgtgaatttctttaaccgctagactactt 500  Q
    ||||||||||||| ||||||  |||||||||||| || |||||||||||    
T  1325358 ccccatttattcatctttaagatgaatttctttagccactagactactt 1325310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 21568416 - 21568488
Alignment:
Q  163 gttaaaatatttgattaatattgtcttatcagttcttcaatatacttacttatcatcttattagtccttatat 235  Q
    ||||||||  || ||||||||| || |||  || ||||||||||||||||||| ||| | |||||||||||||    
T  21568416 gttaaaatgcttcattaatattctcatatttgtccttcaatatacttacttattatcattttagtccttatat 21568488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 378 - 445
Target Start/End: Original strand, 45118637 - 45118704
Alignment:
Q  378 gtccccatgagcttagctcatttggtaagggataatgcatt-tgtatccaggggccgtggttcgaaccc 445  Q
    |||||||||||||||||||| ||||| ||||| | |||||| | ||| ||||||||| |||||||||||    
T  45118637 gtccccatgagcttagctcagttggt-agggacattgcattatatatgcaggggccggggttcgaaccc 45118704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 5e-33; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 378 - 482
Target Start/End: Original strand, 43684272 - 43684376
Alignment:
Q  378 gtccccatgagcttagctcatttggtaagggataatgcatttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaa 477  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||   |||||||| |||||||||||||| |||||    
T  43684272 gtccccatgagcttagctcatttggtaagggataatgcatttgtatgcaggggctgaggttcgaaccccgaacaccccacttattcacctttaaggtgaa 43684371  T
Q  478 tttct 482  Q
    |||||    
T  43684372 tttct 43684376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 378 - 482
Target Start/End: Original strand, 24202143 - 24202248
Alignment:
Q  378 gtccccatgagcttagctcatttggtaagggataatgcatt-tgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtga 476  Q
    |||||| ||||||||||||| |||||||||||||||||||| ||||| ||||||||| |||||||||||   |||||||| |  ||||||||||| ||||    
T  24202143 gtccccgtgagcttagctcacttggtaagggataatgcattatgtatgcaggggccggggttcgaaccccggacaccccactatttcacctttaaggtga 24202242  T
Q  477 atttct 482  Q
    ||||||    
T  24202243 atttct 24202248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 379 - 500
Target Start/End: Original strand, 43027149 - 43027271
Alignment:
Q  379 tccccatgagcttagctcatttggtaagggataatgca---tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtg 475  Q
    ||||||||||||||||||||||| ||||||||||||||   |||||   | || || | ||||||||||| | ||||||||||||||||||||||| |||    
T  43027149 tccccatgagcttagctcatttgataagggataatgcacaatttgtg--cgggtgctgaggttcgaaccccagacaccccatttattcacctttaaggtg 43027246  T
Q  476 aatttctttaaccgctagactactt 500  Q
    ||||||| || || |||||||||||    
T  43027247 aatttctctagccactagactactt 43027271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 138 - 252
Target Start/End: Original strand, 21603501 - 21603615
Alignment:
Q  138 tttgttagtcgaaataatctttgacgttaaaatatttgattaatattgtcttatcagttcttcaatatacttacttatcatcttattagtccttatatat 237  Q
    |||||||||| ||||| |||||||  |||||||||||  ||||||||||| | | |||||||||||| ||||| ||||  || |||| ||||||||| ||    
T  21603501 tttgttagtcaaaatagtctttgatattaaaatatttcgttaatattgtcatgttagttcttcaatagacttagttattgtcatattggtccttatacat 21603600  T
Q  238 acttacttattgtca 252  Q
    |||||||||||||||    
T  21603601 acttacttattgtca 21603615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 399 - 500
Target Start/End: Complemental strand, 37886305 - 37886204
Alignment:
Q  399 ttggtaagggataatgcatttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttctttaaccgctagactac 498  Q
    ||||||||||||||||||||| |||  ||| ||   ||||||||||||  |||||||| |||||||||||||| |||||||||| |||||| ||||||||    
T  37886305 ttggtaagggataatgcatttatatgtaggagctagggttcgaaccctggacaccccacttattcacctttaaggtgaatttctctaaccgttagactac 37886206  T
Q  499 tt 500  Q
    ||    
T  37886205 tt 37886204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 143 - 247
Target Start/End: Complemental strand, 15301598 - 15301494
Alignment:
Q  143 tagtcgaaataatctttgacgttaaaatatttgattaatattgtcttatcagttcttcaatatacttacttatcatcttattagtccttatatatactta 242  Q
    ||||| ||||| ||| |||| |||||||| ||  ||||||||||||||| ||| ||||||||||||||||||| ||| ||| ||||||||||| |||| |    
T  15301598 tagtcaaaatagtctctgacattaaaatacttcgttaatattgtcttattagtacttcaatatacttacttattatcatatgagtccttatatgtactca 15301499  T
Q  243 cttat 247  Q
    |||||    
T  15301498 cttat 15301494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 380 - 500
Target Start/End: Original strand, 29090411 - 29090531
Alignment:
Q  380 ccccatgagcttagctcatttggtaagggataatgcatttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatt 479  Q
    |||| |||||||||||||| || ||||||||||||||||| ||| |||||||||  ||||||||||   ||||| || ||||||| |||||| |||||||    
T  29090411 ccccttgagcttagctcatatgataagggataatgcatttatatacaggggccggagttcgaaccccggacacctcacttattcatctttaaggtgaatt 29090510  T
Q  480 tctttaaccgctagactactt 500  Q
    |||  | ||||||| ||||||    
T  29090511 tctccagccgctaggctactt 29090531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 394 - 500
Target Start/End: Original strand, 42541165 - 42541271
Alignment:
Q  394 ctcatttggtaagggataatgcatttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttctttaaccgctag 493  Q
    |||| |||||||||||||||| || | ||| ||||||| | ||||||||||| | |||||||| ||| |||||||||| |||||||||| || |||||||    
T  42541165 ctcacttggtaagggataatggatatttatgcaggggctggggttcgaaccccagacaccccacttactcacctttaaggtgaatttctctagccgctag 42541264  T
Q  494 actactt 500  Q
     ||||||    
T  42541265 gctactt 42541271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 378 - 421
Target Start/End: Complemental strand, 41541617 - 41541574
Alignment:
Q  378 gtccccatgagcttagctcatttggtaagggataatgcatttgt 421  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  41541617 gtccccatgagcttagctcatttggtaagggataatgcatttgt 41541574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 381 - 500
Target Start/End: Complemental strand, 18949783 - 18949664
Alignment:
Q  381 cccatgagcttagctcatttggtaagggataatgcatt-tgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatt 479  Q
    |||||||||||| |||||||| ||| |||||||||||| | | | |||||| || ||||||||||||  |||||| | |||||||  |||||||||||||    
T  18949783 cccatgagcttaactcatttgataacggataatgcattatatgtgcaggggtcggggttcgaaccctgaacacccaacttattca-ttttaatgtgaatt 18949685  T
Q  480 tctttaaccgctagactactt 500  Q
    ||| || || |||||||||||    
T  18949684 tctctagccactagactactt 18949664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 374 - 500
Target Start/End: Complemental strand, 27463632 - 27463506
Alignment:
Q  374 aattgtccccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaat 472  Q
    ||||||| |||||||||||||||||||||||||| ||||||||   | ||| |||| |||| | ||||||||| | | | |||| ||||||| ||||||     
T  27463632 aattgtctccatgagcttagctcatttggtaaggaataatgcacaatatatgcaggagccgggattcgaaccc-agataacccacttattcatctttaaa 27463534  T
Q  473 gtgaatttctttaaccgctagactactt 500  Q
    |||||||||| ||||| ||||| |||||    
T  27463533 gtgaatttctctaaccactagattactt 27463506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 379 - 488
Target Start/End: Complemental strand, 33482743 - 33482633
Alignment:
Q  379 tccccatgagcttagctcatttggtaagggataatgcatt-tgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaa 477  Q
    ||||||||| ||||||||||||||||||| || |||||   | ||| ||||| ||||||||||||||  | |||||||| ||||||| ||||||  ||||    
T  33482743 tccccatgaacttagctcatttggtaaggaatgatgcacaatatatgcagggaccgtggttcgaacctcagacaccccacttattcatctttaagatgaa 33482644  T
Q  478 tttctttaacc 488  Q
    ||||| |||||    
T  33482643 tttctctaacc 33482633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 378 - 482
Target Start/End: Original strand, 20375586 - 20375691
Alignment:
Q  378 gtccccatgagcttagctcatttggtaagggataatgcat-ttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtga 476  Q
    |||||| ||||||||||||| ||||||||||||| ||| | || ||| ||||| ||| ||||||||||  | |||| ||| ||||||| |||||| ||||    
T  20375586 gtccccgtgagcttagctcacttggtaagggatattgcctattttatgcagggtccggggttcgaacctcagacacgccacttattcatctttaaggtga 20375685  T
Q  477 atttct 482  Q
    ||||||    
T  20375686 atttct 20375691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 381 - 445
Target Start/End: Original strand, 32084841 - 32084906
Alignment:
Q  381 cccatgagcttagctcatttggtaagggataatgcat-ttgtatccaggggccgtggttcgaaccc 445  Q
    ||||||||||||||||||||||||||||| ||||||| || |||  |||||||| |||||||||||    
T  32084841 cccatgagcttagctcatttggtaagggacaatgcatattatatgtaggggccggggttcgaaccc 32084906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 138 - 262
Target Start/End: Complemental strand, 19206518 - 19206394
Alignment:
Q  138 tttgttagtcgaaataatctttgacgttaaaatatttgattaatattgtcttatcagttcttcaatatacttacttatcatcttattagtccttatatat 237  Q
    |||||||||| ||||| ||| ||| ||||| || | | |||||||||||||||| ||| |||||||||| ||||||||  || ||  ||| ||||||  |    
T  19206518 tttgttagtcaaaatattctctgatgttaagatgtattattaatattgtcttattagtccttcaatatatttacttattgtcatagcagttcttataagt 19206419  T
Q  238 acttacttattgtcacttcattctc 262  Q
    |||||| |||||||| |||| ||||    
T  19206418 acttacatattgtcatttcagtctc 19206394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 436 - 500
Target Start/End: Complemental strand, 37592265 - 37592201
Alignment:
Q  436 gttcgaaccctatacaccccatttattcacctttaatgtgaatttctttaaccgctagactactt 500  Q
    |||||||||| | |||||||| ||||| |||||||| |||||||||| || ||||||||||||||    
T  37592265 gttcgaaccccagacaccccacttatttacctttaaggtgaatttctctagccgctagactactt 37592201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 437 - 500
Target Start/End: Original strand, 5207145 - 5207208
Alignment:
Q  437 ttcgaaccctatacaccccatttattcacctttaatgtgaatttctttaaccgctagactactt 500  Q
    ||||||||| | |||||||| ||||||||||||||  |||||||||||| || |||||||||||    
T  5207145 ttcgaaccccagacaccccacttattcacctttaagatgaatttctttagccactagactactt 5207208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 373 - 416
Target Start/End: Original strand, 34107483 - 34107526
Alignment:
Q  373 taattgtccccatgagcttagctcatttggtaagggataatgca 416  Q
    |||| ||||| |||||||||||||||||||||||||||||||||    
T  34107483 taatcgtccctatgagcttagctcatttggtaagggataatgca 34107526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 379 - 418
Target Start/End: Complemental strand, 38790182 - 38790143
Alignment:
Q  379 tccccatgagcttagctcatttggtaagggataatgcatt 418  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  38790182 tccccgtgagcttagctcatttggtaagggataatgcatt 38790143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 382 - 416
Target Start/End: Original strand, 16403522 - 16403556
Alignment:
Q  382 ccatgagcttagctcatttggtaagggataatgca 416  Q
    |||||||||||||||||||||||||||||||||||    
T  16403522 ccatgagcttagctcatttggtaagggataatgca 16403556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 374 - 416
Target Start/End: Original strand, 41749936 - 41749978
Alignment:
Q  374 aattgtccccatgagcttagctcatttggtaagggataatgca 416  Q
    ||||||||||||||||| ||||||||||| |||||||||||||    
T  41749936 aattgtccccatgagctaagctcatttggcaagggataatgca 41749978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 141 - 210
Target Start/End: Original strand, 12676474 - 12676543
Alignment:
Q  141 gttagtcgaaataatctttgacgttaaaatatttgattaatattgtcttatcagttcttcaatatactta 210  Q
    ||||||| ||||||| | |||||||||||| ||| |||||||||||| ||| ||| | ||||||||||||    
T  12676474 gttagtcaaaataatttctgacgttaaaatgttttattaatattgtcatattagtccctcaatatactta 12676543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 378 - 482
Target Start/End: Original strand, 20435774 - 20435879
Alignment:
Q  378 gtccccatgagcttagctcatttggtaagggataatgcat-ttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtga 476  Q
    |||||| ||||||||||||| ||||||||||||| ||||| || ||| || || ||| ||||||||||    ||| |||| ||||||| |||||| ||||    
T  20435774 gtccccgtgagcttagctcacttggtaagggatattgcatattttatgcaaggcccggggttcgaacctcggacatcccacttattcatctttaaggtga 20435873  T
Q  477 atttct 482  Q
    ||||||    
T  20435874 atttct 20435879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 385 - 482
Target Start/End: Complemental strand, 25783308 - 25783211
Alignment:
Q  385 tgagcttagctcatttggtaagggataatgcatttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttct 482  Q
    ||||||||||||| ||||| ||||||||||||| | ||| ||||||    ||||||||||||  |||||||| ||||||| ||| || ||||| ||||    
T  25783308 tgagcttagctcacttggtgagggataatgcatatatatgcaggggttagggttcgaaccctggacaccccacttattcatcttcaaggtgaagttct 25783211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 379 - 416
Target Start/End: Complemental strand, 31149202 - 31149165
Alignment:
Q  379 tccccatgagcttagctcatttggtaagggataatgca 416  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  31149202 tccccatgagcatagctcatttggtaagggataatgca 31149165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 142 - 250
Target Start/End: Original strand, 6788314 - 6788422
Alignment:
Q  142 ttagtcgaaataatctttgacgttaaaatatttgattaatattgtcttatcagttcttcaatatacttacttatcatcttattagtccttatatatactt 241  Q
    |||||| ||||||||  |||| |||||||| ||  ||||||||||| ||  |||  |||||||||||||||||| ||| ||  ||||||||||  || ||    
T  6788314 ttagtcaaaataatcaatgacattaaaataatttgttaatattgtcatactagtcattcaatatacttacttattatcatagcagtccttataagtattt 6788413  T
Q  242 acttattgt 250  Q
    |||||||||    
T  6788414 acttattgt 6788422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 389 - 479
Target Start/End: Original strand, 1962830 - 1962921
Alignment:
Q  389 cttagctcatttggtaagggataatgcat-ttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatt 479  Q
    |||| |||| ||||||| ||||||||||| |||||| |||||| || ||||||||| |   |||||||| ||||||| |||||| |||||||    
T  1962830 cttaactcacttggtaaaggataatgcatattgtatgcaggggtcgaggttcgaactccggacaccccacttattcatctttaaggtgaatt 1962921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 377 - 416
Target Start/End: Complemental strand, 11069448 - 11069409
Alignment:
Q  377 tgtccccatgagcttagctcatttggtaagggataatgca 416  Q
    ||||| ||||||||||||||||||||||||| ||||||||    
T  11069448 tgtccgcatgagcttagctcatttggtaaggaataatgca 11069409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 500
Target Start/End: Complemental strand, 12183837 - 12183714
Alignment:
Q  378 gtccccatgagcttagctcatttggtaagggataatgcatt-tgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtga 476  Q
    |||||||||| |||| |||| ||||||||| |||||||||| ||||| |||||| || | ||||||| | | ||| |||| |  || |||||||| ||||    
T  12183837 gtccccatgaacttacctcacttggtaaggaataatgcattatgtatgcaggggtcgggattcgaactccagacatcccactattttacctttaaggtga 12183738  T
Q  477 atttctttaaccgctagactactt 500  Q
    ||||||   | |||||||||||||    
T  12183737 atttctccgatcgctagactactt 12183714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 500
Target Start/End: Original strand, 31605499 - 31605614
Alignment:
Q  385 tgagcttagctcatttggtaagggataatgcatttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttcttt 484  Q
    |||||||| |||| || |||||||||||||||| | ||| |||||  || ||||||||||  | ||||   |||||||||| |||||  ||||||||| |    
T  31605499 tgagcttaactcacttagtaagggataatgcatatatatgcagggaacggggttcgaacctcagacactttatttattcacatttaagatgaatttctct 31605598  T
Q  485 aaccgctagactactt 500  Q
    | || |||||||||||    
T  31605599 acccactagactactt 31605614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 378 - 416
Target Start/End: Complemental strand, 25553247 - 25553209
Alignment:
Q  378 gtccccatgagcttagctcatttggtaagggataatgca 416  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  25553247 gtccccatgagcttaattcatttggtaagggataatgca 25553209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 375 - 503
Target Start/End: Complemental strand, 19843468 - 19843339
Alignment:
Q  375 attgtccccatgagcttagctcatttggtaagggataatgcatt-tgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatg 473  Q
    ||||||| |||||||||| ||||||| ||||||||| ||| |   | | | |||||| |  ||||||||||||| ||||| || ||||||| |||||| |    
T  19843468 attgtcctcatgagcttaactcatttcgtaagggatgatgtacaatatgtgcaggggtcagggttcgaaccctagacacctcacttattcatctttaagg 19843369  T
Q  474 tgaatttctttaaccgctagactacttaac 503  Q
    ||||||||| || |  |||| |||||||||    
T  19843368 tgaatttctctagctactaggctacttaac 19843339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 161 - 250
Target Start/End: Complemental strand, 30256294 - 30256205
Alignment:
Q  161 acgttaaaatatttgattaatattgtcttatcagttcttcaatatacttacttatcatcttattagtccttatatatacttacttattgt 250  Q
    ||||||||||||||  ||||||||||| ||| |||   |||||||||||| |||| ||| ||| || |||| ||| |||||| |||||||    
T  30256294 acgttaaaatattttgttaatattgtcatattagtcactcaatatacttatttattatcatatcagaccttgtatgtacttagttattgt 30256205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 500
Target Start/End: Complemental strand, 33065353 - 33065236
Alignment:
Q  384 atgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttct 482  Q
    ||||||||||||||||||| |||||||||||||   ||| |  ||||| || ||||||||| |   |||||| | ||||||| |||||| ||||||||||    
T  33065353 atgagcttagctcatttggcaagggataatgcacaatgtgtgtaggggtcggggttcgaactccgaacaccctacttattcatctttaaggtgaatttct 33065254  T
Q  483 ttaaccgctagactactt 500  Q
     || || |||| ||||||    
T  33065253 ctagccactaggctactt 33065236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 210
Target Start/End: Original strand, 33261004 - 33261073
Alignment:
Q  141 gttagtcgaaataatctttgacgttaaaatatttgattaatattgtcttatcagttcttcaatatactta 210  Q
    ||||||| ||||| ||||||||  ||||||||||  || |||||||| ||| | ||||||||||||||||    
T  33261004 gttagtcaaaatagtctttgacagtaaaatatttcgttgatattgtcatattatttcttcaatatactta 33261073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 377 - 482
Target Start/End: Original strand, 29034968 - 29035074
Alignment:
Q  377 tgtccccatgagcttagctcatttggtaagggataatgcatt--tgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgt 474  Q
    ||||||| ||||| ||||||| |||| | |||| ||||||||  | ||| ||||||||| |||||||||||   |||||||| |||||||| || || ||    
T  29034968 tgtccccgtgagcatagctcacttggca-gggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcactttaaaagt 29035066  T
Q  475 gaatttct 482  Q
    ||||||||    
T  29035067 gaatttct 29035074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 378 - 414
Target Start/End: Complemental strand, 40203381 - 40203345
Alignment:
Q  378 gtccccatgagcttagctcatttggtaagggataatg 414  Q
    |||| ||||||||||||||||| ||||||||||||||    
T  40203381 gtcctcatgagcttagctcattcggtaagggataatg 40203345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 71; Significance: 7e-32; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 378 - 500
Target Start/End: Original strand, 37574266 - 37574388
Alignment:
Q  378 gtccccatgagcttagctcatttggtaagggataatgcatttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaa 477  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||    ||||||| |||||||||||||| |||||    
T  37574266 gtccccatgagcttagctcatttggtaagggataatgcatttgtatgcaggggccggggttcaaaccccgggcaccccacttattcacctttaaggtgaa 37574365  T
Q  478 tttctttaaccgctagactactt 500  Q
    ||||| || || |||| ||||||    
T  37574366 tttctctagccactaggctactt 37574388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 379 - 503
Target Start/End: Original strand, 38690660 - 38690785
Alignment:
Q  379 tccccatgagcttagctcatttggtaagggataatgcat-ttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaa 477  Q
    ||||||||||||||||||| ||||||||||||||||||| || ||| |||||| || |||||||||||   |||||||| |||||| ||||||| |||||    
T  38690660 tccccatgagcttagctcacttggtaagggataatgcatattatatgcaggggtcggggttcgaaccccggacaccccacttattctcctttaaggtgaa 38690759  T
Q  478 tttctttaaccgctagactacttaac 503  Q
    ||||| || ||||||| |||||||||    
T  38690760 tttctctagccgctaggctacttaac 38690785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 138 - 252
Target Start/End: Original strand, 14810266 - 14810380
Alignment:
Q  138 tttgttagtcgaaataatctttgacgttaaaatatttgattaatattgtcttatcagttcttcaatatacttacttatcatcttattagtccttatatat 237  Q
    |||||||||| ||||| |||||||  |||| ||||||  ||||||||||| | | |||||||||||| ||||| ||||  || |||||||||||||| ||    
T  14810266 tttgttagtcaaaatagtctttgatattaatatatttcgttaatattgtcatgttagttcttcaatagacttagttattttcatattagtccttatacat 14810365  T
Q  238 acttacttattgtca 252  Q
    |||||||||||||||    
T  14810366 acttacttattgtca 14810380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 129 - 252
Target Start/End: Complemental strand, 17381575 - 17381452
Alignment:
Q  129 attgtacaatttgttagtcgaaataatctttgacgttaaaatatttgattaatattgtcttatcagttcttcaatatacttacttatcatcttattagtc 228  Q
    ||||| || ||||||| || ||||| || ||||  |||||||||||  ||||||||||| ||| ||| ||||||||||||||||||| ||| | ||||||    
T  17381575 attgtgcactttgttaatcaaaatagtccttgatattaaaatatttcgttaatattgtcatattagtccttcaatatacttacttattatcatgttagtc 17381476  T
Q  229 cttatatatacttacttattgtca 252  Q
    ||||||  |||||| |||||||||    
T  17381475 cttatacgtacttatttattgtca 17381452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 138 - 257
Target Start/End: Original strand, 40836721 - 40836840
Alignment:
Q  138 tttgttagtcgaaataatctttgacgttaaaatatttgattaatattgtcttatcagttcttcaatatacttacttatcatcttattagtccttatatat 237  Q
    |||||||||| ||||| ||| |||  |||||||  || |||||||||||| || ||||  ||||||| |||||||||| ||| ||| |||||||||| ||    
T  40836721 tttgttagtcaaaatagtctgtgatattaaaatgcttcattaatattgtcataccagtctttcaatacacttacttattatcatatcagtccttataaat 40836820  T
Q  238 acttacttattgtcacttca 257  Q
    ||||||||||||||| ||||    
T  40836821 acttacttattgtcatttca 40836840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 381 - 500
Target Start/End: Original strand, 16556447 - 16556567
Alignment:
Q  381 cccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatt 479  Q
    ||||||||||||||||||||||||||||||||||||   | | | |||||| || |||||||||||   |||||||| ||||||| |||||| |||||||    
T  16556447 cccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggtcggggttcgaaccccgaacaccccacttattcatctttaaggtgaatt 16556546  T
Q  480 tctttaaccgctagactactt 500  Q
    ||| || || |||| ||||||    
T  16556547 tctctagccactaggctactt 16556567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 385 - 500
Target Start/End: Complemental strand, 13539933 - 13539819
Alignment:
Q  385 tgagcttagctcatttggtaagggataatgcatttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttcttt 484  Q
    ||||||||||||| ||||||||||||||||||| | ||| ||||| |   ||||||||||| | ||||| |||||||||||| |||| |||||||||| |    
T  13539933 tgagcttagctcacttggtaagggataatgcatatttatgcagggactagggttcgaaccccaaacacctcatttattcacc-ttaaggtgaatttctct 13539835  T
Q  485 aaccgctagactactt 500  Q
      ||||||| ||||||    
T  13539834 ggccgctaggctactt 13539819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 376 - 471
Target Start/End: Original strand, 34974693 - 34974788
Alignment:
Q  376 ttgtccccatgagcttagctcatttggtaagggataatgcatttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaa 471  Q
    |||||| ||||| ||||  |||||||||||||||||||||||||||||  |||||| | |||||||||||   |||||||| |||||| |||||||    
T  34974693 ttgtcctcatgaacttaattcatttggtaagggataatgcatttgtatgtaggggctggggttcgaaccccggacaccccacttattctcctttaa 34974788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 381 - 483
Target Start/End: Complemental strand, 43362267 - 43362164
Alignment:
Q  381 cccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatt 479  Q
    ||||||||||||||||||||| ||||||||||||||   | ||| |||||| || |||||||||||   |||||||| ||||||| |||||| |||||||    
T  43362267 cccatgagcttagctcatttgctaagggataatgcacaatatattcaggggtcggggttcgaaccccggacaccccacttattcatctttaaggtgaatt 43362168  T
Q  480 tctt 483  Q
    ||||    
T  43362167 tctt 43362164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 378 - 500
Target Start/End: Original strand, 46283115 - 46283238
Alignment:
Q  378 gtccccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtga 476  Q
    ||||||||||||||| |||||||||||||||||||||||   | | | ||| ||||| |||||||||||   |||||||| ||||||| |||||| ||||    
T  46283115 gtccccatgagcttacctcatttggtaagggataatgcacaatatgtgcagcggccggggttcgaaccccggacaccccacttattcatctttaaggtga 46283214  T
Q  477 atttctttaaccgctagactactt 500  Q
    |||||| ||  | |||||||||||    
T  46283215 atttctctagtcactagactactt 46283238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 129 - 215
Target Start/End: Complemental strand, 38932842 - 38932756
Alignment:
Q  129 attgtacaatttgttagtcgaaataatctttgacgttaaaatatttgattaatattgtcttatcagttcttcaatatacttacttat 215  Q
    |||||||| |||||||||| ||||| ||| | || ||||||||||| |||||||||||| ||| ||| |||||||||||||| ||||    
T  38932842 attgtacattttgttagtcaaaatagtctctaacattaaaatatttcattaatattgtcatattagtccttcaatatacttatttat 38932756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 399 - 493
Target Start/End: Complemental strand, 44251407 - 44251313
Alignment:
Q  399 ttggtaagggataatgcatttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttctttaaccgctag 493  Q
    ||||||||||||||||||||| ||| |||||| || |||||||| ||   |||||||||||||||| |||||| |||||||| | || |||||||    
T  44251407 ttggtaagggataatgcatttttatgcaggggtcggggttcgaatcccggacaccccatttattcatctttaaggtgaatttttctagccgctag 44251313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 164 - 234
Target Start/End: Complemental strand, 46805007 - 46804937
Alignment:
Q  164 ttaaaatatttgattaatattgtcttatcagttcttcaatatacttacttatcatcttattagtccttata 234  Q
    ||||||||||| ||||||||| || | ||||||||||||||||||||||||  ||| ||||||||||||||    
T  46805007 ttaaaatatttcattaatattatcatgtcagttcttcaatatacttacttaatatcgtattagtccttata 46804937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 379 - 482
Target Start/End: Complemental strand, 40407062 - 40406957
Alignment:
Q  379 tccccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggcc-gtggttcgaaccctatacaccccatttattcacctttaatgtga 476  Q
    ||||||||||||||||||||||||||||||||||||||   | | | |||||||| | |||||||||||   |||||||| ||||||| |||||| ||||    
T  40407062 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccgggggttcgaaccccggacaccccacttattcatctttaaggtga 40406963  T
Q  477 atttct 482  Q
    ||||||    
T  40406962 atttct 40406957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 376 - 503
Target Start/End: Complemental strand, 29889882 - 29889754
Alignment:
Q  376 ttgtccccatgagcttagctcatttggtaagggataatgcat-ttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgt 474  Q
    |||||||  ||||||||||||| |  |||||||||||||||| || ||| ||||||||| |||||||||     |  |||||||||||||| ||||| ||    
T  29889882 ttgtccctgtgagcttagctcactatgtaagggataatgcatattatatgcaggggccggggttcgaacttcggatgccccatttattcacatttaaggt 29889783  T
Q  475 gaatttctttaaccgctagactacttaac 503  Q
    |||||||| || ||||||| |||||||||    
T  29889782 gaatttctctagccgctaggctacttaac 29889754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 376 - 416
Target Start/End: Original strand, 51974738 - 51974778
Alignment:
Q  376 ttgtccccatgagcttagctcatttggtaagggataatgca 416  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  51974738 ttgtccccatgagcttagctcatttggtaagggataatgca 51974778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 376 - 482
Target Start/End: Original strand, 56555538 - 56555646
Alignment:
Q  376 ttgtccccatgagcttag-ctcatttggtaa-gggataatgcatttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatg 473  Q
    |||||||| ||||||||| ||||  |||||| |||||||||||||| ||| |||||| || ||||||||||    |||||||| |||||||||||||| |    
T  56555538 ttgtccccgtgagcttaggctcacatggtaaagggataatgcatttatatgcaggggtcggggttcgaacctcgaacaccccacttattcacctttaagg 56555637  T
Q  474 tgaatttct 482  Q
    |||||||||    
T  56555638 tgaatttct 56555646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 158 - 249
Target Start/End: Complemental strand, 48973399 - 48973308
Alignment:
Q  158 ttgacgttaaaatatttgattaatattgtcttatcagttcttcaatatacttacttatcatcttattagtccttatatatacttacttattg 249  Q
    |||| ||||||||  || |||||||||||| ||| ||| |||||||||||||||||||  || |||  ||||||||| ||||||||||||||    
T  48973399 ttgatgttaaaatgcttcattaatattgtcatattagtccttcaatatacttacttattgtcatatcggtccttataaatacttacttattg 48973308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 129 - 215
Target Start/End: Original strand, 13834408 - 13834494
Alignment:
Q  129 attgtacaatttgttagtcgaaataatctttgacgttaaaatatttgattaatattgtcttatcagttcttcaatatacttacttat 215  Q
    ||||| || |||||||||| ||||| ||||| || |||||||| ||  ||||||||||| ||| ||| |||||||||||||||||||    
T  13834408 attgtgcactttgttagtcaaaatagtctttaacattaaaataatttgttaatattgtcatattagtccttcaatatacttacttat 13834494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 129 - 210
Target Start/End: Complemental strand, 4161908 - 4161827
Alignment:
Q  129 attgtacaatttgttagtcgaaataatctttgacgttaaaatatttgattaatattgtcttatcagttcttcaatatactta 210  Q
    ||||| || |||||||||| ||||| ||| |||  ||||||| ||| |||||||||||| ||| ||||||||||||||||||    
T  4161908 attgtgcattttgttagtcaaaatagtctatgatattaaaatgtttcattaatattgtcatattagttcttcaatatactta 4161827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 435 - 500
Target Start/End: Complemental strand, 25234902 - 25234837
Alignment:
Q  435 ggttcgaaccctatacaccccatttattcacctttaatgtgaatttctttaaccgctagactactt 500  Q
    ||||||||||| | |||||||| ||||||| |||||| |||||||||| ||||| |||||||||||    
T  25234902 ggttcgaaccccagacaccccagttattcatctttaaggtgaatttctctaaccactagactactt 25234837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 129 - 210
Target Start/End: Original strand, 46805834 - 46805915
Alignment:
Q  129 attgtacaatttgttagtcgaaataatctttgacgttaaaatatttgattaatattgtcttatcagttcttcaatatactta 210  Q
    |||||||| || ||||||| ||||||| |||||| |||||||||||  ||||| || || ||||||| ||||||||||||||    
T  46805834 attgtacacttcgttagtcaaaataatatttgacattaaaatattttgttaatgttatcatatcagtacttcaatatactta 46805915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 376 - 479
Target Start/End: Complemental strand, 2832175 - 2832071
Alignment:
Q  376 ttgtccccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgt 474  Q
    ||||||||||||||||||||||| ||||||||| | |||||   | | | |||||| || ||||||||||| | |||||||| ||||||| |||||| ||    
T  2832175 ttgtccccatgagcttagctcatctggtaaggggtgatgcacaatatgtgcaggggtcggggttcgaaccccaaacaccccacttattcatctttaaggt 2832076  T
Q  475 gaatt 479  Q
    |||||    
T  2832075 gaatt 2832071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 135 - 215
Target Start/End: Complemental strand, 8170980 - 8170900
Alignment:
Q  135 caatttgttagtcgaaataatctttgacgttaaaatatttgattaatattgtcttatcagttcttcaatatacttacttat 215  Q
    ||||| ||||||| ||||||||| | |  ||||||| ||| |||||||||||| ||| ||| |||||||||||||||||||    
T  8170980 caattcgttagtcaaaataatctctaatattaaaatgtttcattaatattgtcatattagtacttcaatatacttacttat 8170900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 159 - 215
Target Start/End: Original strand, 31903362 - 31903418
Alignment:
Q  159 tgacgttaaaatatttgattaatattgtcttatcagttcttcaatatacttacttat 215  Q
    ||||||||||||| || |||| ||||||| ||||||| |||||||||||||||||||    
T  31903362 tgacgttaaaataattcattagtattgtcatatcagtccttcaatatacttacttat 31903418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 500
Target Start/End: Original strand, 50815700 - 50815823
Alignment:
Q  378 gtccccatgagcttagctcatttggtaagggataatgc---atttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgt 474  Q
    |||||||||||||||||||||||| ||| |||||||||   |||||  | ||||||||| |||||||||||   ||||||||  |||||| ||| || ||    
T  50815700 gtccccatgagcttagctcatttgataaaggataatgcacaatttg--tgcaggggccggggttcgaaccccggacaccccacatattcatcttaaaggt 50815797  T
Q  475 gaatttctttaaccgctagactactt 500  Q
    |||||||| || || |||| ||||||    
T  50815798 gaatttctctagccactaggctactt 50815823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 377 - 416
Target Start/End: Complemental strand, 27862934 - 27862895
Alignment:
Q  377 tgtccccatgagcttagctcatttggtaagggataatgca 416  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  27862934 tgtccccatgagcttagctcatttgataagggataatgca 27862895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 449 - 500
Target Start/End: Original strand, 35733439 - 35733490
Alignment:
Q  449 acaccccatttattcacctttaatgtgaatttctttaaccgctagactactt 500  Q
    |||||||| |||||||||||||| |||| |||||||| ||||||||||||||    
T  35733439 acaccccacttattcacctttaaggtgagtttctttagccgctagactactt 35733490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 377 - 416
Target Start/End: Original strand, 49635424 - 49635463
Alignment:
Q  377 tgtccccatgagcttagctcatttggtaagggataatgca 416  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  49635424 tgtccccatgagtttagctcatttggtaagggataatgca 49635463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 399 - 500
Target Start/End: Complemental strand, 2766839 - 2766737
Alignment:
Q  399 ttggtaagggataatgcatt-tgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttctttaaccgctagacta 497  Q
    |||||||||||||||||||| ||||| ||||||||| | ||||||||| |  |||| || |  ||||||||||| ||||||||||  | ||||||| |||    
T  2766839 ttggtaagggataatgcattatgtatgcaggggccgggattcgaaccccaggcacctcactatttcacctttaaggtgaatttctccagccgctaggcta 2766740  T
Q  498 ctt 500  Q
    |||    
T  2766739 ctt 2766737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 378 - 416
Target Start/End: Complemental strand, 41971401 - 41971363
Alignment:
Q  378 gtccccatgagcttagctcatttggtaagggataatgca 416  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  41971401 gtccccatgagcttagctcatttggtaagtgataatgca 41971363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 376 - 482
Target Start/End: Original strand, 9692953 - 9693060
Alignment:
Q  376 ttgtccccatgagcttagctcatttggtaagggataatgcatt--tgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatg 473  Q
    |||||||| ||||| ||||||| |||| | |||||||||||||  | ||| ||||||||| |||||||||||   |||||||| |||||||| || || |    
T  9692953 ttgtccccgtgagcatagctcagttggca-gggataatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcactttaaaag 9693051  T
Q  474 tgaatttct 482  Q
    |||||||||    
T  9693052 tgaatttct 9693060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 141 - 257
Target Start/End: Original strand, 11839861 - 11839977
Alignment:
Q  141 gttagtcgaaataatctttgacgttaaaatatttgattaatattgtcttatcagttcttcaatatacttacttatcatcttattagtccttatatatact 240  Q
    ||||||| ||||| || ||||| |||||||| ||  ||||||||||| ||| ||| |||||||| ||||||||||  || ||| ||||||||    ||||    
T  11839861 gttagtcaaaatagtccttgacattaaaatacttcgttaatattgtcatattagtccttcaatacacttacttattgtcatataagtccttaccagtact 11839960  T
Q  241 tacttattgtcacttca 257  Q
    | |||||||||| ||||    
T  11839961 tgcttattgtcatttca 11839977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 142 - 242
Target Start/End: Complemental strand, 24806742 - 24806642
Alignment:
Q  142 ttagtcgaaataatctttgacgttaaaatatttgattaatattgtcttatcagttcttcaatatacttacttatcatcttattagtccttatatatactt 241  Q
    |||||| ||||| ||| | || |||||||| ||  ||||||||||| ||  |||| ||||||||||||||||||  || ||||| ||||||||| |||||    
T  24806742 ttagtcaaaatagtctctaacattaaaataatttgttaatattgtcatagtagtttttcaatatacttacttattgtcatattattccttatatgtactt 24806643  T
Q  242 a 242  Q
    |    
T  24806642 a 24806642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 381 - 500
Target Start/End: Complemental strand, 26885499 - 26885379
Alignment:
Q  381 cccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatt 479  Q
    |||||||||||||||||||||| | |||||||||||  || ||| | ||||||| |||||||||||   |||| ||| ||||| | |||||| ||| |||    
T  26885499 cccatgagcttagctcatttggcaggggataatgcacattatatgctggggccggggttcgaaccccggacactccacttatttatctttaaggtggatt 26885400  T
Q  480 tctttaaccgctagactactt 500  Q
    ||| || || |||| ||||||    
T  26885399 tctctagccactaggctactt 26885379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 381 - 417
Target Start/End: Original strand, 39387474 - 39387510
Alignment:
Q  381 cccatgagcttagctcatttggtaagggataatgcat 417  Q
    ||||||| |||||||||||||||||||||||||||||    
T  39387474 cccatgaacttagctcatttggtaagggataatgcat 39387510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 385 - 500
Target Start/End: Complemental strand, 49811502 - 49811387
Alignment:
Q  385 tgagcttagctcatttggtaagggataatgcat-ttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttctt 483  Q
    |||||||| |||| ||||||||| ||||||||| || |||  |||||| | |||||||||||   | |||||| ||||||||||||||  |||||||||     
T  49811502 tgagcttatctcacttggtaaggaataatgcatattatatgtaggggcag-ggttcgaacccataataccccacttattcacctttaagatgaatttctc 49811404  T
Q  484 taaccgctagactactt 500  Q
    || ||||||| ||||||    
T  49811403 tagccgctaggctactt 49811387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 138 - 262
Target Start/End: Complemental strand, 50384629 - 50384506
Alignment:
Q  138 tttgttagtcgaaataatctttgacgttaaaatatttgattaatattgtcttatcagttcttcaatatacttacttatcatcttattagtccttatatat 237  Q
    |||||||||| ||||| | | ||| |||||||||||| |||| ||||||| |||  ||  |||||||||||||||||| ||| ||| | ||||||||  |    
T  50384629 tttgttagtcaaaatagtttatgatgttaaaatatttcatta-tattgtcatattcgtctttcaatatacttacttattatcatatcaatccttataagt 50384531  T
Q  238 acttacttattgtcacttcattctc 262  Q
    | ||| ||||||||| |||| ||||    
T  50384530 atttatttattgtcatttcagtctc 50384506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 377 - 416
Target Start/End: Complemental strand, 8716493 - 8716454
Alignment:
Q  377 tgtccccatgagcttagctcatttggtaagggataatgca 416  Q
    ||||||||||| ||||||||||||| ||||||||||||||    
T  8716493 tgtccccatgaacttagctcatttgataagggataatgca 8716454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 158 - 257
Target Start/End: Original strand, 9297461 - 9297560
Alignment:
Q  158 ttgacgttaaaatatttgattaatattgtcttatcagttcttcaatatacttacttatcatcttattagtccttatatatacttacttattgtcacttca 257  Q
    ||||| |||||||| ||  ||||||||||| ||| |||  || |||||||||| |||| ||| ||| |||||||||| ||||||  ||||||||| ||||    
T  9297461 ttgacattaaaatactttgttaatattgtcatattagtcattaaatatacttatttattatcatatcagtccttataaatacttctttattgtcatttca 9297560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 391 - 497
Target Start/End: Original strand, 32037573 - 32037680
Alignment:
Q  391 tagctcatttggtaagggataatgcat-ttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttctttaaccg 489  Q
    ||||||| ||||| ||||||||||||| || ||| |||||| || ||||| || |||  | | ||||||||||||| ||||| |||||||||| || |||    
T  32037573 tagctcacttggttagggataatgcatattatatgcaggggtcggggttcaaatcctggatatcccatttattcacatttaaagtgaatttctctagccg 32037672  T
Q  490 ctagacta 497  Q
    ||| ||||    
T  32037673 ctaaacta 32037680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 381 - 416
Target Start/End: Original strand, 36993037 - 36993072
Alignment:
Q  381 cccatgagcttagctcatttggtaagggataatgca 416  Q
    ||||||||||||||||||||| ||||||||||||||    
T  36993037 cccatgagcttagctcatttgataagggataatgca 36993072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 449 - 500
Target Start/End: Original strand, 49607615 - 49607666
Alignment:
Q  449 acaccccatttattcacctttaatgtgaatttctttaaccgctagactactt 500  Q
    |||||||| |||||||||||||| |||||||||| || ||| ||||||||||    
T  49607615 acaccccacttattcacctttaaggtgaatttctctagccgatagactactt 49607666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 215
Target Start/End: Original strand, 51150956 - 51151007
Alignment:
Q  164 ttaaaatatttgattaatattgtcttatcagttcttcaatatacttacttat 215  Q
    |||||||||||  ||||||||||| ||| ||| |||||||||||||||||||    
T  51150956 ttaaaatattttgttaatattgtcatattagtacttcaatatacttacttat 51151007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 378 - 416
Target Start/End: Complemental strand, 13210266 - 13210228
Alignment:
Q  378 gtccccatgagcttagctcatttggtaagggataatgca 416  Q
    ||||| |||||||||||||||||||| ||||||||||||    
T  13210266 gtccctatgagcttagctcatttggtcagggataatgca 13210228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 378 - 416
Target Start/End: Original strand, 23448966 - 23449004
Alignment:
Q  378 gtccccatgagcttagctcatttggtaagggataatgca 416  Q
    |||||||||| ||||||| ||||||||||||||||||||    
T  23448966 gtccccatgaacttagcttatttggtaagggataatgca 23449004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 382 - 416
Target Start/End: Complemental strand, 35909127 - 35909093
Alignment:
Q  382 ccatgagcttagctcatttggtaagggataatgca 416  Q
    ||||||||||||||||||| |||||||||||||||    
T  35909127 ccatgagcttagctcattttgtaagggataatgca 35909093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 418
Target Start/End: Original strand, 9884829 - 9884858
Alignment:
Q  389 cttagctcatttggtaagggataatgcatt 418  Q
    ||||||||||||||||||||||||||||||    
T  9884829 cttagctcatttggtaagggataatgcatt 9884858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 214
Target Start/End: Complemental strand, 28286487 - 28286403
Alignment:
Q  129 attgtacaatttgttagtcgaaataatctttgacgttaaaatatttgattaatattgtcttatcagttcttcaatatacttactta 214  Q
    |||||| | |||||||||  ||||| |||||||||||||||| |||  |||||| |||| |||||| || |||||||| |||||||    
T  28286487 attgtatactttgttagttaaaatagtctttgacgttaaaatctttcgttaatactgtcatatcag-tcctcaatataattactta 28286403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 376 - 416
Target Start/End: Original strand, 8716545 - 8716585
Alignment:
Q  376 ttgtccccatgagcttagctcatttggtaagggataatgca 416  Q
    ||||||| || |||||| |||||||||||||||||||||||    
T  8716545 ttgtccctataagcttatctcatttggtaagggataatgca 8716585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 449 - 497
Target Start/End: Original strand, 22525453 - 22525501
Alignment:
Q  449 acaccccatttattcacctttaatgtgaatttctttaaccgctagacta 497  Q
    |||||||| ||||||||||||||  ||||||||| |||||||| |||||    
T  22525453 acaccccacttattcacctttaagatgaatttctctaaccgctggacta 22525501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 376 - 416
Target Start/End: Original strand, 43084438 - 43084478
Alignment:
Q  376 ttgtccccatgagcttagctcatttggtaagggataatgca 416  Q
    ||||| ||||||||||| |||||||||||||| ||||||||    
T  43084438 ttgtctccatgagcttaactcatttggtaaggaataatgca 43084478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 378 - 445
Target Start/End: Original strand, 55055913 - 55055980
Alignment:
Q  378 gtccccatgagcttagctcatttggtaagggataatgcat-ttgtatccaggggccgtggttcgaaccc 445  Q
    |||||| ||||||||||||| ||||| ||||| ||||||| || ||| ||||||||| |||||||||||    
T  55055913 gtccccgtgagcttagctcagttggt-agggacaatgcatattttatgcaggggccgaggttcgaaccc 55055980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 1e-30; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 376 - 500
Target Start/End: Original strand, 5228062 - 5228186
Alignment:
Q  376 ttgtccccatgagcttagctcatttggtaagggataatgcatttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtg 475  Q
    |||||||||||||||||||||| ||| ||| ||||||||||||| ||| ||||||||| |||||||| |||  |||||||| |||||||||||||| |||    
T  5228062 ttgtccccatgagcttagctcacttgataaaggataatgcatttttatgcaggggccggggttcgaatcctggacaccccacttattcacctttaaggtg 5228161  T
Q  476 aatttctttaaccgctagactactt 500  Q
    ||||||| || ||||||| ||||||    
T  5228162 aatttctctagccgctaggctactt 5228186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 373 - 500
Target Start/End: Original strand, 14707281 - 14707408
Alignment:
Q  373 taattgtccccatgagcttagctcatttggtaagggataatgcatttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaat 472  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||||  | |||||||||||   |||||||| |||||||||||||      
T  14707281 taatcgtccccatgagcttagctcatttggtaagggataatgcatttatatgcaggggttggggttcgaaccccggacaccccacttattcacctttata 14707380  T
Q  473 gtgaatttctttaaccgctagactactt 500  Q
    |||||||||| || ||| ||||||||||    
T  14707381 gtgaatttctctagccgttagactactt 14707408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 378 - 500
Target Start/End: Original strand, 15025149 - 15025272
Alignment:
Q  378 gtccccatgagcttagctcatttggtaagggataatgcat-ttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtga 476  Q
    ||||||||||||||| |||||||||||||||||||||||| || ||| ||||||||| ||||| |||||   |||||||| |||||||||||||| ||||    
T  15025149 gtccccatgagcttaactcatttggtaagggataatgcatattttatacaggggccggggttcaaaccccgaacaccccacttattcacctttaaggtga 15025248  T
Q  477 atttctttaaccgctagactactt 500  Q
    |||||| || ||||||| ||||||    
T  15025249 atttctctacccgctaggctactt 15025272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 402 - 482
Target Start/End: Complemental strand, 10091534 - 10091454
Alignment:
Q  402 gtaagggataatgcatttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttct 482  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||| |||||| | |||||||||||||| ||||||||||    
T  10091534 gtaagggataatgcatttgtatgcaggggccggggttcgaaccctagacacccaacttattcacctttaaggtgaatttct 10091454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 377 - 482
Target Start/End: Original strand, 40273813 - 40273919
Alignment:
Q  377 tgtccccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtg 475  Q
    ||||||||||||||||||||||||||||||||||||||||   | | | ||||||||| |||||||||||   |||||||| ||||||| |||||| |||    
T  40273813 tgtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaaggtg 40273912  T
Q  476 aatttct 482  Q
    |||||||    
T  40273913 aatttct 40273919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 385 - 502
Target Start/End: Original strand, 46243291 - 46243409
Alignment:
Q  385 tgagcttagctcatttggtaagggataatgcat-ttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttctt 483  Q
    ||||||||||||||||||||||||||||||||| || |||  ||||  ||  |||||||| |   |||||||| |||||||||||||| ||||||||||     
T  46243291 tgagcttagctcatttggtaagggataatgcatattatatatagggatcggagttcgaactccgaacaccccacttattcacctttaaggtgaatttctc 46243390  T
Q  484 taaccgctagactacttaa 502  Q
    ||||||||||| |||||||    
T  46243391 taaccgctagaatacttaa 46243409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 378 - 502
Target Start/End: Original strand, 37665737 - 37665862
Alignment:
Q  378 gtccccatgagcttagctcatttggtaagggataatgcat-ttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtga 476  Q
    |||||| |||||||| |||||||||||| ||||||  ||| || ||| ||||||||| ||||| |||||   |||||||| |||||| ||||||| ||||    
T  37665737 gtccccgtgagcttaactcatttggtaaaggataaaacatattatatgcaggggccggggttcaaaccccggacaccccacttattcgcctttaaggtga 37665836  T
Q  477 atttctttaaccgctagactacttaa 502  Q
    ||||||||| || |||||||||||||    
T  37665837 atttctttagccactagactacttaa 37665862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 378 - 500
Target Start/End: Original strand, 24029978 - 24030100
Alignment:
Q  378 gtccccatgagcttagctcatttggtaagggataatgca---tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgt 474  Q
    ||||||||||| |||||||||||| ||||||||||||||   | ||| |  |||||||| ||||||||||| | |||||||||||||||| |||||| ||    
T  24029978 gtccccatgagtttagctcatttgataagggataatgcacaatatgtgt--aggggccggggttcgaaccccagacaccccatttattcatctttaaggt 24030075  T
Q  475 gaatttctttaaccgctagactactt 500  Q
    |||||||| || || |||||||||||    
T  24030076 gaatttctctagcc-ctagactactt 24030100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 378 - 500
Target Start/End: Complemental strand, 48433812 - 48433689
Alignment:
Q  378 gtccccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtga 476  Q
    |||||||||||||||||||||||||||||||||||||||   | | | ||||||||| ||||| |||||   |||||||| ||||||| |||||| ||||    
T  48433812 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcaaaccccggacaccccacttattcatctttaaggtga 48433713  T
Q  477 atttctttaaccgctagactactt 500  Q
    |||||| || || |||| ||||||    
T  48433712 atttctctagccactaggctactt 48433689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 385 - 482
Target Start/End: Complemental strand, 44662558 - 44662460
Alignment:
Q  385 tgagcttagctcatttggtaagggataatgcatt-tgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttct 482  Q
    ||||||||||||| | |||||||||||||||||| ||||| ||||||||| |||||||||||   |||||||| |  ||||||||||| ||||||||||    
T  44662558 tgagcttagctcactaggtaagggataatgcattatgtatgcaggggccggggttcgaaccccggacaccccactatttcacctttaaggtgaatttct 44662460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 381 - 493
Target Start/End: Original strand, 20013578 - 20013690
Alignment:
Q  381 cccatgagcttagctcatttggtaagggataatgcatttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaattt 480  Q
    ||||||| |||| |||||||||||| ||||||||||||||||| |||||||||  ||||||| ||   ||| |||| |||| |||||||||  |||||||    
T  20013578 cccatgaacttaactcatttggtaaaggataatgcatttgtatgcaggggccgaagttcgaatcccggacatcccacttatccacctttaagatgaattt 20013677  T
Q  481 ctttaaccgctag 493  Q
    || || |||||||    
T  20013678 ctctagccgctag 20013690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 394 - 482
Target Start/End: Original strand, 20529906 - 20529994
Alignment:
Q  394 ctcatttggtaagggataatgcatttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttct 482  Q
    |||||||||||||||||||||||||||||| |||||  || ||||| | |||   |||||||| |||||||||||||| ||||||||||    
T  20529906 ctcatttggtaagggataatgcatttgtatgcagggatcggggttcaagccccggacaccccacttattcacctttaaggtgaatttct 20529994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 385 - 500
Target Start/End: Original strand, 23602274 - 23602390
Alignment:
Q  385 tgagcttagctcatttggtaagggataatgcat-ttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttctt 483  Q
    ||||||||||||||||| ||||| ||||||||| || ||| ||| | |||  ||||||||||   ||||| || |||||||||||||| |||||||||||    
T  23602274 tgagcttagctcatttgataaggaataatgcatattatatgcagtgaccggagttcgaaccccggacacctcacttattcacctttaaggtgaatttctt 23602373  T
Q  484 taaccgctagactactt 500  Q
    || || |||||||||||    
T  23602374 tagccactagactactt 23602390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 382 - 498
Target Start/End: Complemental strand, 48258281 - 48258165
Alignment:
Q  382 ccatgagcttagctcatttggtaagggataatgcatttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttc 481  Q
    |||||| |||| || |||||||||| ||||||||||||||||  ||| | ||  ||||||||||   ||||||||||||||||||||||| ||||||||     
T  48258281 ccatgaacttaacttatttggtaagtgataatgcatttgtatgtaggagtcggagttcgaaccccggacaccccatttattcacctttaaagtgaatttg 48258182  T
Q  482 tttaaccgctagactac 498  Q
    | || ||||||| ||||    
T  48258181 tctagccgctaggctac 48258165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 385 - 500
Target Start/End: Complemental strand, 9668909 - 9668795
Alignment:
Q  385 tgagcttagctcatttggtaagggataatgcatttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttcttt 484  Q
    ||||||||||||| ||||||||||||||||||| | ||| ||||| |   ||||||||||| | ||||| |||||||||||| |||| |||||||||| |    
T  9668909 tgagcttagctcacttggtaagggataatgcatatttatgcagggactagggttcgaaccccaaacacctcatttattcacc-ttaaggtgaatttctct 9668811  T
Q  485 aaccgctagactactt 500  Q
      ||||||| ||||||    
T  9668810 ggccgctaggctactt 9668795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 394 - 500
Target Start/End: Complemental strand, 10624882 - 10624777
Alignment:
Q  394 ctcatttggtaagggataatgcatttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttctttaaccgctag 493  Q
    |||||||| |||||||||||||||||| || |||||| |  ||||||||||| | ||||| || ||||||| |||||| |||||||||| || ||||| |    
T  10624882 ctcatttgataagggataatgcatttgcatgcaggggtcagggttcgaaccccaaacaccgcacttattca-ctttaaggtgaatttctctagccgcttg 10624784  T
Q  494 actactt 500  Q
    |||||||    
T  10624783 actactt 10624777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 382 - 482
Target Start/End: Original strand, 12166079 - 12166180
Alignment:
Q  382 ccatgagcttagctcatttggtaagggataatgc---atttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaat 478  Q
    |||||| |||||||||||||||||||||||||||   |||||  | ||||||| | ||||||||||| | |||||||| ||||||| |||||| ||||||    
T  12166079 ccatgaacttagctcatttggtaagggataatgcacaatttg--tgcaggggctggggttcgaaccccagacaccccacttattcatctttaaggtgaat 12166176  T
Q  479 ttct 482  Q
    ||||    
T  12166177 ttct 12166180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 164 - 257
Target Start/End: Original strand, 39608431 - 39608524
Alignment:
Q  164 ttaaaatatttgattaatattgtcttatcagttcttcaatatacttacttatcatcttattagtccttatatatacttacttattgtcacttca 257  Q
    |||||||| ||||||||||||||| ||| |||  |||| ||||||||||||| ||| |||||||| |||||  |||||| ||||||||| ||||    
T  39608431 ttaaaatacttgattaatattgtcatattagtcattcagtatacttacttattatcgtattagtctttataattacttatttattgtcatttca 39608524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 376 - 416
Target Start/End: Complemental strand, 23824695 - 23824655
Alignment:
Q  376 ttgtccccatgagcttagctcatttggtaagggataatgca 416  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  23824695 ttgtccccatgagcttagctcatttggtaagggataatgca 23824655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 378 - 484
Target Start/End: Complemental strand, 33248904 - 33248797
Alignment:
Q  378 gtccccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtga 476  Q
    ||||||||||||||||||||||||||||||||| |||||   | ||| ||| || || |||||||||||   |||||| | ||||||| |||||| ||||    
T  33248904 gtccccatgagcttagctcatttggtaagggatgatgcacaatatatgcagaggtcggggttcgaaccccggacaccctacttattcatctttaaggtga 33248805  T
Q  477 atttcttt 484  Q
    ||||||||    
T  33248804 atttcttt 33248797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 375 - 416
Target Start/End: Original strand, 44986584 - 44986625
Alignment:
Q  375 attgtccccatgagcttagctcatttggtaagggataatgca 416  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  44986584 attgtcctcatgagcttagctcatttggtaagggataatgca 44986625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 377 - 500
Target Start/End: Original strand, 46266660 - 46266784
Alignment:
Q  377 tgtccccatgagcttagctcatttggtaagggataatgc---atttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatg 473  Q
    |||||||||||||||| ||||||||||||||||||||||   |||||  | | |||| || |||||||||| |  ||| |||| ||||||| ||| || |    
T  46266660 tgtccccatgagcttaactcatttggtaagggataatgcacaatttg--tgcgggggacggggttcgaaccttgaacatcccacttattcatcttaaagg 46266757  T
Q  474 tgaatttctttaaccgctagactactt 500  Q
    ||||||| | ||||| |||||||||||    
T  46266758 tgaatttatctaaccactagactactt 46266784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 129 - 252
Target Start/End: Original strand, 12927654 - 12927777
Alignment:
Q  129 attgtacaatttgttagtcgaaataatctttgacgttaaaatatttgattaatattgtcttatcagttcttcaatatacttacttatcatcttattagtc 228  Q
    ||||| || |||||||||| ||||| || || |  |||||||||||  ||||||||||| | | |||||||||||| ||||| ||||  || |||| |||    
T  12927654 attgtgcactttgttagtcaaaatagtccttcatattaaaatattttgttaatattgtcatgttagttcttcaatagacttagttattgtcatatttgtc 12927753  T
Q  229 cttatatatacttacttattgtca 252  Q
    ||||||  |||||||||| |||||    
T  12927754 cttatacgtacttacttactgtca 12927777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 378 - 500
Target Start/End: Complemental strand, 26456107 - 26455984
Alignment:
Q  378 gtccccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtga 476  Q
    |||||||||||||||||||||||||||||||| ||||||   | | | ||||| | |  ||| |||||| | |||| ||| ||||||||||| || ||||    
T  26456107 gtccccatgagcttagctcatttggtaagggacaatgcacaatatgtgcagggactgacgtttgaaccccagacactccagttattcaccttaaaggtga 26456008  T
Q  477 atttctttaaccgctagactactt 500  Q
    |||||| || || |||||||||||    
T  26456007 atttctctagccactagactactt 26455984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 381 - 416
Target Start/End: Original strand, 27454007 - 27454042
Alignment:
Q  381 cccatgagcttagctcatttggtaagggataatgca 416  Q
    ||||||||||||||||||||||||||||||||||||    
T  27454007 cccatgagcttagctcatttggtaagggataatgca 27454042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 449 - 500
Target Start/End: Original strand, 32376504 - 32376555
Alignment:
Q  449 acaccccatttattcacctttaatgtgaatttctttaaccgctagactactt 500  Q
    |||||||||||||||| |||||| ||||||||||||| |||||| |||||||    
T  32376504 acaccccatttattcaactttaaggtgaatttctttagccgctaaactactt 32376555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 378 - 416
Target Start/End: Complemental strand, 3902375 - 3902337
Alignment:
Q  378 gtccccatgagcttagctcatttggtaagggataatgca 416  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  3902375 gtccccacgagcttagctcatttggtaagggataatgca 3902337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 136 - 250
Target Start/End: Original strand, 5362332 - 5362446
Alignment:
Q  136 aatttgttagtcgaaataatctttgacgttaaaatatttgattaatattgtcttatcagttcttcaatatacttacttatcatcttattagtccttatat 235  Q
    |||||||||||| ||||| ||  |||  |||||||| ||  ||||||| ||| ||| ||| |||||||||||||| |||| ||| ||| | ||||||||     
T  5362332 aatttgttagtcaaaatagtccctgatattaaaatacttcgttaatatggtcatattagtccttcaatatacttatttattatcatatcaatccttataa 5362431  T
Q  236 atacttacttattgt 250  Q
    ||| |||||||||||    
T  5362432 atatttacttattgt 5362446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 378 - 416
Target Start/End: Complemental strand, 36528321 - 36528283
Alignment:
Q  378 gtccccatgagcttagctcatttggtaagggataatgca 416  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  36528321 gtccccatgagcttaactcatttggtaagggataatgca 36528283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 382 - 416
Target Start/End: Original strand, 42554631 - 42554665
Alignment:
Q  382 ccatgagcttagctcatttggtaagggataatgca 416  Q
    |||||||||||||||||||||||||||||||||||    
T  42554631 ccatgagcttagctcatttggtaagggataatgca 42554665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 149 - 210
Target Start/End: Original strand, 1344444 - 1344505
Alignment:
Q  149 aaataatctttgacgttaaaatatttgattaatattgtcttatcagttcttcaatatactta 210  Q
    |||||||||||||  |||||||| || ||||||||||||  |||||| ||||||||||||||    
T  1344444 aaataatctttgatattaaaatacttcattaatattgtcacatcagtccttcaatatactta 1344505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 368 - 500
Target Start/End: Complemental strand, 26606221 - 26606088
Alignment:
Q  368 ctacgtaattgtccccatgagcttagctcatttggtaagggataatgcatttg-tatccaggggccgtggttcgaaccctatacaccccatttattcacc 466  Q
    |||| ||| |||||| |||||||||| ||| ||| ||||| ||||||||  |  |||  |||||||| |||| |||||||  |||| ||| |||||||||    
T  26606221 ctacttaactgtccctatgagcttagttcacttgataaggaataatgcaaatcatatgtaggggccggggtttgaaccctggacactccacttattcacc 26606122  T
Q  467 tttaatgtgaatttctttaaccgctagactactt 500  Q
    ||||| |||||||||| || ||||| | ||||||    
T  26606121 tttaaggtgaatttctctagccgcttggctactt 26606088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 378 - 482
Target Start/End: Original strand, 31793461 - 31793566
Alignment:
Q  378 gtccccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtga 476  Q
    |||| ||||||||||||||||||| ||||||||||||||   | | | |||||| || |||||||||||   |||||||| ||||||| |||||| |||     
T  31793461 gtccacatgagcttagctcatttgttaagggataatgcacaatatgtgcaggggtcggggttcgaaccccggacaccccacttattcatctttaaggtgg 31793560  T
Q  477 atttct 482  Q
    ||||||    
T  31793561 atttct 31793566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 177 - 234
Target Start/End: Original strand, 32996366 - 32996423
Alignment:
Q  177 ttaatattgtcttatcagttcttcaatatacttacttatcatcttattagtccttata 234  Q
    ||||||||||| ||| ||| |||||||||||||| |||| ||| ||||||||||||||    
T  32996366 ttaatattgtcatattagtccttcaatatacttatttattatcatattagtccttata 32996423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 379 - 416
Target Start/End: Complemental strand, 42338348 - 42338311
Alignment:
Q  379 tccccatgagcttagctcatttggtaagggataatgca 416  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  42338348 tccccatgagcttagctcatttggtaaggaataatgca 42338311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 373 - 445
Target Start/End: Complemental strand, 46570078 - 46570005
Alignment:
Q  373 taattgtccccatgagcttagctcatttggtaagggataatgcat-ttgtatccaggggccgtggttcgaaccc 445  Q
    |||| |||||| ||||||||||||| ||| |||||||||||||||  | ||| ||||||||| |||||||||||    
T  46570078 taatagtccccgtgagcttagctcacttgataagggataatgcatagtttatgcaggggccggggttcgaaccc 46570005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 377 - 413
Target Start/End: Original strand, 1575686 - 1575722
Alignment:
Q  377 tgtccccatgagcttagctcatttggtaagggataat 413  Q
    |||||||||||||||| ||||||||||||||||||||    
T  1575686 tgtccccatgagcttaactcatttggtaagggataat 1575722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 377 - 480
Target Start/End: Complemental strand, 8133898 - 8133794
Alignment:
Q  377 tgtccccatgagcttagctcatttggtaagggataatgcat-ttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtg 475  Q
    |||||| |||||||||||||| ||| ||| |||||||||||  | ||| |||||||||  |||||||| | | |||||||||| |||  ||||||| |||    
T  8133898 tgtccctatgagcttagctcacttgataatggataatgcataatttatgcaggggccgaagttcgaactccagacaccccattaatttgcctttaaggtg 8133799  T
Q  476 aattt 480  Q
    |||||    
T  8133798 aattt 8133794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 377 - 417
Target Start/End: Original strand, 8249697 - 8249737
Alignment:
Q  377 tgtccccatgagcttagctcatttggtaagggataatgcat 417  Q
    ||||||||||||||||||||| ||||||| |||||||||||    
T  8249697 tgtccccatgagcttagctcacttggtaaaggataatgcat 8249737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 381 - 417
Target Start/End: Original strand, 10900070 - 10900106
Alignment:
Q  381 cccatgagcttagctcatttggtaagggataatgcat 417  Q
    ||||||||||||||||||||||||||| |||||||||    
T  10900070 cccatgagcttagctcatttggtaaggaataatgcat 10900106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 390 - 500
Target Start/End: Complemental strand, 28914968 - 28914856
Alignment:
Q  390 ttagctcatttggtaagggataatgcat-ttgtatccagggg-ccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttctttaac 487  Q
    ||||||||  |||||||||||||||||| || ||| |||||| ||| |||||||||||   |||||||| |||||||| || || |||||||||| || |    
T  28914968 ttagctcacatggtaagggataatgcatattatatgcagggggccggggttcgaaccccggacaccccacttattcactttaaaggtgaatttctctagc 28914869  T
Q  488 cgctagactactt 500  Q
    | |||| ||||||    
T  28914868 cactaggctactt 28914856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 378 - 430
Target Start/End: Original strand, 32986339 - 32986391
Alignment:
Q  378 gtccccatgagcttagctcatttggtaagggataatgcatttgtatccagggg 430  Q
    |||||||| | |||| ||||||||| |||||||||||||||||||| ||||||    
T  32986339 gtccccatcaacttaactcatttggcaagggataatgcatttgtatgcagggg 32986391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 425 - 500
Target Start/End: Complemental strand, 4956146 - 4956071
Alignment:
Q  425 caggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttctttaaccgctagactactt 500  Q
    |||||| || ||||||||||||  |||||||| ||||||| |||||| |||||||||| || || |||| ||||||    
T  4956146 caggggtcggggttcgaaccctggacaccccacttattcatctttaaggtgaatttctctagccactaggctactt 4956071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 483
Target Start/End: Original strand, 29357801 - 29357899
Alignment:
Q  385 tgagcttagctcatttggtaagggataatgcatt-tgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttctt 483  Q
    ||||||||||||| ||| |||||||||||||||| | ||| || ||||||  |||||||||||  |||| ||| |  ||||||||||| |||||||||||    
T  29357801 tgagcttagctcacttgataagggataatgcattatatatgca-gggccggagttcgaaccctggacactccactatttcacctttaaggtgaatttctt 29357899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 161 - 252
Target Start/End: Complemental strand, 32188215 - 32188124
Alignment:
Q  161 acgttaaaatatttgattaatattgtcttatcagttcttcaatatacttacttatcatcttattagtccttatatatacttacttattgtca 252  Q
    |||||||||| | | |||||||||| | ||| ||| |  |||||||||||||||| ||| |||||||| ||||| ||||||| ||| |||||    
T  32188215 acgttaaaatgtctaattaatattgacatattagtcccccaatatacttacttattatcatattagtcattataaatacttaattagtgtca 32188124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 416
Target Start/End: Complemental strand, 38110277 - 38110246
Alignment:
Q  385 tgagcttagctcatttggtaagggataatgca 416  Q
    ||||||||||||||||||||||||||||||||    
T  38110277 tgagcttagctcatttggtaagggataatgca 38110246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 376 - 482
Target Start/End: Original strand, 46195909 - 46196016
Alignment:
Q  376 ttgtccccatgagcttagctcatttggtaagggataatgcatt-tgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgt 474  Q
    |||||||| ||| ||||||| | ||| |||||||||||| ||| ||||| |||||| || |||| ||||||   |||||||| |  ||||||||||| ||    
T  46195909 ttgtccccgtgaacttagcttacttgataagggataatgtattatgtatgcaggggtcggggtttgaaccccggacaccccactatttcacctttaaggt 46196008  T
Q  475 gaatttct 482  Q
    ||||||||    
T  46196009 gaatttct 46196016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 141 - 215
Target Start/End: Complemental strand, 5198096 - 5198022
Alignment:
Q  141 gttagtcgaaataatctttgacgttaaaatatttgattaatattgtcttatcagttcttcaatatacttacttat 215  Q
    ||||||| ||||||||| | || |||||||| || |||||||||||| ||| |||  ||||||||||||| ||||    
T  5198096 gttagtcaaaataatctctaacattaaaatacttcattaatattgtcatattagtctttcaatatacttatttat 5198022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 129 - 163
Target Start/End: Complemental strand, 39608606 - 39608572
Alignment:
Q  129 attgtacaatttgttagtcgaaataatctttgacg 163  Q
    ||||||||||||||||||| |||||||||||||||    
T  39608606 attgtacaatttgttagtcaaaataatctttgacg 39608572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 482
Target Start/End: Complemental strand, 6548805 - 6548709
Alignment:
Q  386 gagcttagctcatttggtaagggataatgcatt-tgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttct 482  Q
    |||||||||||| || |||||| |||||||||| ||||| || |||||| ||||||||| |   |||||||| |  ||||||||||| ||||||||||    
T  6548805 gagcttagctcacttagtaaggaataatgcattatgtatgca-gggccggggttcgaactccggacaccccactatttcacctttaaggtgaatttct 6548709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 418
Target Start/End: Original strand, 9992610 - 9992643
Alignment:
Q  385 tgagcttagctcatttggtaagggataatgcatt 418  Q
    ||||||||||||||||| ||||||||||||||||    
T  9992610 tgagcttagctcatttgataagggataatgcatt 9992643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 26905197 - 26905116
Alignment:
Q  176 attaatattgtcttatcagttcttcaatatacttacttatcatcttattagtccttatatatacttacttattgtcacttca 257  Q
    ||||||||| || ||| | | |||||||||||||||||||  || ||||||||||| ||  |||||| ||||||||| ||||    
T  26905197 attaatattatcatattattccttcaatatacttacttattgtcatattagtccttgtaagtacttatttattgtcatttca 26905116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 377 - 414
Target Start/End: Original strand, 28712360 - 28712397
Alignment:
Q  377 tgtccccatgagcttagctcatttggtaagggataatg 414  Q
    ||||| |||||||||| |||||||||||||||||||||    
T  28712360 tgtcctcatgagcttaactcatttggtaagggataatg 28712397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 167 - 215
Target Start/End: Original strand, 3116914 - 3116962
Alignment:
Q  167 aaatatttgattaatattgtcttatcagttcttcaatatacttacttat 215  Q
    |||||||| |||||||||||| ||| |||  ||||||||||||||||||    
T  3116914 aaatatttcattaatattgtcatattagtctttcaatatacttacttat 3116962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 379 - 446
Target Start/End: Complemental strand, 19753040 - 19752973
Alignment:
Q  379 tccccatgagcttagctcatttggtaagggataatgcat-ttgtatccaggggccgtggttcgaaccct 446  Q
    ||||| ||||||||||||| |||||| |||||| ||||| || ||| ||||||||| ||||||||||||    
T  19753040 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggggccggggttcgaaccct 19752973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 381 - 417
Target Start/End: Original strand, 25965742 - 25965778
Alignment:
Q  381 cccatgagcttagctcatttggtaagggataatgcat 417  Q
    |||||||||||||||||  ||||||||||||||||||    
T  25965742 cccatgagcttagctcacctggtaagggataatgcat 25965778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 137 - 209
Target Start/End: Original strand, 39129054 - 39129126
Alignment:
Q  137 atttgttagtcgaaataatctttgacgttaaaatatttgattaatattgtcttatcagttcttcaatatactt 209  Q
    |||| |||||| |||||||| ||||  |||||||||||  ||||||||||| ||| |||  ||||||||||||    
T  39129054 attttttagtcaaaataatcattgatattaaaatattttgttaatattgtcatattagtcattcaatatactt 39129126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 2e-23; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 138 - 257
Target Start/End: Original strand, 6541096 - 6541213
Alignment:
Q  138 tttgttagtcgaaataatctttgacgttaaaatatttgattaatattgtcttatcagttcttcaatatacttacttatcatcttattagtccttatatat 237  Q
    ||||||||||  ||||||||||||| |||||||||||  ||||||||||| ||| ||| |||||||||||||||||||  || ||| |||| ||||| ||    
T  6541096 tttgttagtc--aataatctttgacattaaaatatttcgttaatattgtcatattagtccttcaatatacttacttattgtcatatcagtctttataaat 6541193  T
Q  238 acttacttattgtcacttca 257  Q
    ||||||||||||||| ||||    
T  6541194 acttacttattgtcatttca 6541213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 35309718 - 35309825
Alignment:
Q  378 gtccccatgagcttagctcatttggtaagggataatgcatttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaa 477  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| ||||||  |  | ||||||||   |||||||| ||||||| |||||| |||||    
T  35309718 gtccccatgagcttagctcatttggtaagggataatacatttgtatgcaggggttggaggtcgaaccccgaacaccccacttattcatctttaaggtgaa 35309817  T
Q  478 tttcttta 485  Q
    ||||||||    
T  35309818 tttcttta 35309825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 394 - 500
Target Start/End: Complemental strand, 2350460 - 2350354
Alignment:
Q  394 ctcatttggtaagggataatgcatttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttctttaaccgctag 493  Q
    |||||||||||| ||||||| ||||||||| ||||| | | |||||||||||   |||||||| |||||||||||||| ||||||||||||| |||||||    
T  2350460 ctcatttggtaatggataatacatttgtatgcagggactggggttcgaaccccgaacaccccacttattcacctttaaagtgaatttctttagccgctag 2350361  T
Q  494 actactt 500  Q
     ||||||    
T  2350360 gctactt 2350354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 389 - 500
Target Start/End: Original strand, 19424050 - 19424162
Alignment:
Q  389 cttagctcatttggtaagggataatgcat-ttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttctttaac 487  Q
    ||||||||||||| ||||||||||||||| || ||| |||||| || |||||||||||   |||||||| |||||||||||||| |||||||||| || |    
T  19424050 cttagctcatttgataagggataatgcatattatatgcaggggtcggggttcgaaccccggacaccccacttattcacctttaaggtgaatttctctagc 19424149  T
Q  488 cgctagactactt 500  Q
    |||||| ||||||    
T  19424150 cgctaggctactt 19424162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 378 - 500
Target Start/End: Complemental strand, 34702415 - 34702292
Alignment:
Q  378 gtccccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtga 476  Q
    |||||||||||||||||||||||||||||||||||||||   | | | ||||||||| |||||||||||   ||||| || ||||||| ||||||  |||    
T  34702415 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccccggacacctcacttattcatctttaagatga 34702316  T
Q  477 atttctttaaccgctagactactt 500  Q
    ||||||||| || |||||||||||    
T  34702315 atttctttagccactagactactt 34702292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 376 - 500
Target Start/End: Complemental strand, 43109342 - 43109217
Alignment:
Q  376 ttgtccccatgagcttagctcatttggtaagggataatgc-atttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgt 474  Q
    ||||| |||||||||||||||||||||||||||||||||| |  | | | ||||||||| |||||||||||   ||||| |||||||||| |||||| ||    
T  43109342 ttgtctccatgagcttagctcatttggtaagggataatgcaaaatatgtgcaggggccggggttcgaaccccggacacctcatttattcatctttaaggt 43109243  T
Q  475 gaatttctttaaccgctagactactt 500  Q
    |||||||| || || |||| ||||||    
T  43109242 gaatttctctagccactaggctactt 43109217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 385 - 500
Target Start/End: Original strand, 22779223 - 22779339
Alignment:
Q  385 tgagcttagctcatttggtaagggataatgcat-ttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttctt 483  Q
    ||||||||||||| ||||||||||||||||||| || ||| |||| | || ||||||||||| | |||||||| ||||||||||||||  |||||||||     
T  22779223 tgagcttagctcacttggtaagggataatgcatattttatacaggagtcggggttcgaaccccaaacaccccacttattcacctttaaaatgaatttctc 22779322  T
Q  484 taaccgctagactactt 500  Q
    || ||  ||||||||||    
T  22779323 tagccaatagactactt 22779339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 379 - 482
Target Start/End: Complemental strand, 24134725 - 24134621
Alignment:
Q  379 tccccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaa 477  Q
    ||||||||||||||||||||||||||||||||||||||   | | | ||||||||| |||||||||||   |||||||| ||||||| |||||| |||||    
T  24134725 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaaggtgaa 24134626  T
Q  478 tttct 482  Q
    |||||    
T  24134625 tttct 24134621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 381 - 500
Target Start/End: Original strand, 7438617 - 7438737
Alignment:
Q  381 cccatgagcttagctcatttggtaagggataatgc---atttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaa 477  Q
    |||||||||||||||||||||||||||||||||||   |||||| |  ||||| || ||||||||| |   |||||||| ||||||| ||| || |||||    
T  7438617 cccatgagcttagctcatttggtaagggataatgcacaatttgtgt--aggggtcggggttcgaactccggacaccccacttattcatcttaaaggtgaa 7438714  T
Q  478 tttctttaaccgctagactactt 500  Q
    |||||||| || |||||||||||    
T  7438715 tttctttagccactagactactt 7438737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 376 - 500
Target Start/End: Complemental strand, 12973382 - 12973257
Alignment:
Q  376 ttgtccccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgt 474  Q
    ||||||||||||| |||||||||||||||||||||||||||   | ||| ||||||||| | ||| ||| |   |||||||| ||||||| |||||| ||    
T  12973382 ttgtccccatgagtttagctcatttggtaagggataatgcacaatatatgcaggggccgagattcaaactcctgacaccccacttattcatctttaaggt 12973283  T
Q  475 gaatttctttaaccgctagactactt 500  Q
     |||||||||| || |||||||||||    
T  12973282 aaatttctttagccactagactactt 12973257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 378 - 482
Target Start/End: Original strand, 50011500 - 50011605
Alignment:
Q  378 gtccccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtga 476  Q
    |||||||||||||||||||||||||||||||||||||||   | | | ||||||| | ||||||||||| | ||| |||| ||||||| |||||| ||||    
T  50011500 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccagacatcccacttattcatctttaaggtga 50011599  T
Q  477 atttct 482  Q
    ||||||    
T  50011600 atttct 50011605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 376 - 482
Target Start/End: Original strand, 8893851 - 8893958
Alignment:
Q  376 ttgtccccatgagcttagctcatttggtaagggataatgc---atttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaat 472  Q
    |||||| ||||||||||| |||||||||||||||||||||   || ||||  |||||| || ||||||||||| | |||||||| ||||||| ||||||     
T  8893851 ttgtccacatgagcttagttcatttggtaagggataatgcacaatatgta--caggggtcggggttcgaaccccaaacaccccacttattcatctttaag 8893948  T
Q  473 gtgaatttct 482  Q
    ||||||||||    
T  8893949 gtgaatttct 8893958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 380 - 502
Target Start/End: Original strand, 17916702 - 17916821
Alignment:
Q  380 ccccatgagcttagctcatttggtaagggataatgcatt-tgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaat 478  Q
    |||| ||||||||||||||||||||| |||||||| ||| | ||| |||||| || |||||||||    ||||||| | |  ||||||||||||||||||    
T  17916702 ccccgtgagcttagctcatttggtaaaggataatgtattatatatgcaggggtcggggttcgaac----tacaccctactatttcacctttaatgtgaat 17916797  T
Q  479 ttctttaaccgctagactacttaa 502  Q
    ||||  ||||||||| ||||||||    
T  17916798 ttctccaaccgctaggctacttaa 17916821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 378 - 500
Target Start/End: Original strand, 29332279 - 29332400
Alignment:
Q  378 gtccccatgagcttagctcatttggtaagggataatgcatttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaa 477  Q
    ||||||||||||||| |||| ||| |||||||||||| || |  || || |||||| |||| ||||||   |||||||| |||||||||||||| |||||    
T  29332279 gtccccatgagcttaactcacttgataagggataatgtatata-atgcatgggccggggtttgaaccccggacaccccacttattcacctttaaggtgaa 29332377  T
Q  478 tttctttaaccgctagactactt 500  Q
    ||||| || ||||||| ||||||    
T  29332378 tttctctagccgctaggctactt 29332400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 376 - 482
Target Start/End: Original strand, 44583579 - 44583685
Alignment:
Q  376 ttgtccccatgagcttagctcatttggtaagggataatgcatttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtg 475  Q
    |||| |||||||||||| |||||||| ||||||||||| |||||||||  ||||| || ||||||||| |   |||| |||  ||||||||||||| |||    
T  44583579 ttgttcccatgagcttaactcatttgataagggataatacatttgtatgtaggggtcggggttcgaactccggacactccacctattcacctttaaggtg 44583678  T
Q  476 aatttct 482  Q
    |||||||    
T  44583679 aatttct 44583685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 376 - 417
Target Start/End: Complemental strand, 39304307 - 39304266
Alignment:
Q  376 ttgtccccatgagcttagctcatttggtaagggataatgcat 417  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  39304307 ttgtccccatgagcttagctcatttggtaagggataatgcat 39304266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 385 - 500
Target Start/End: Complemental strand, 35195706 - 35195590
Alignment:
Q  385 tgagcttagctcatttggtaagggataatgcat-ttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttctt 483  Q
    ||||||||||||| ||  ||||||||||||||| || ||| ||||| ||  |||||||||||  ||||| ||| |||||||||||||| || |||||||     
T  35195706 tgagcttagctcacttaataagggataatgcatattatatgcagggaccagggttcgaaccccgtacactccacttattcacctttaaggtaaatttctc 35195607  T
Q  484 taaccgctagactactt 500  Q
    || ||||||| ||||||    
T  35195606 tagccgctaggctactt 35195590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 381 - 500
Target Start/End: Complemental strand, 40210014 - 40209894
Alignment:
Q  381 cccatgagcttagctcatttggtaagggataatgcat-ttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatt 479  Q
    ||||||||||||| ||| ||||||||||| ||||||| || |||  ||||| ||  |||||||||| | ||||| ||||| ||||||||||| |||||||    
T  40210014 cccatgagcttagatcacttggtaagggacaatgcatattatatgtaggggtcgaagttcgaaccccaaacacctcattttttcacctttaaggtgaatt 40209915  T
Q  480 tctttaaccgctagactactt 500  Q
    ||| |  || |||||||||||    
T  40209914 tctctggccactagactactt 40209894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 381 - 492
Target Start/End: Complemental strand, 46532594 - 46532482
Alignment:
Q  381 cccatgagcttagctcatttggtaagggataatgcatt-tgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatt 479  Q
    |||||||||||| |||||||||||||| |||||| ||| ||||| | ||||||| | |||||||   | |||||||| |  ||||||||||| |||||||    
T  46532594 cccatgagcttaactcatttggtaaggaataatgtattatgtatgctggggccgggattcgaacttcagacaccccactatttcacctttaaggtgaatt 46532495  T
Q  480 tctttaaccgcta 492  Q
    ||| |||||||||    
T  46532494 tctctaaccgcta 46532482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 378 - 500
Target Start/End: Original strand, 4126892 - 4127015
Alignment:
Q  378 gtccccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtga 476  Q
    ||||||||||| |||||||||||||||||||||||||||   | ||| ||| |||||  ||| |||| |   |||||||||||||||| |||||| ||||    
T  4126892 gtccccatgagtttagctcatttggtaagggataatgcacaatatatgcagaggccgatgtttgaacaccggacaccccatttattcatctttaaggtga 4126991  T
Q  477 atttctttaaccgctagactactt 500  Q
    |||| | || || |||||||||||    
T  4126992 atttatctagccactagactactt 4127015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 375 - 503
Target Start/End: Original strand, 25421844 - 25421974
Alignment:
Q  375 attgtccccatgagcttagctcatttggtaagggataatgc---atttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctt-ta 470  Q
    |||||||||||||||||| |||||||||||||||| |||||   |||||| |  |||||| | ||||| ||||| | |||| ||| |||||||||||  |    
T  25421844 attgtccccatgagcttaactcatttggtaagggacaatgcacaatttgtgt--aggggctggggttcaaaccccagacactccacttattcaccttaaa 25421941  T
Q  471 atgtgaatttctttaaccgctagactacttaac 503  Q
    | |||||||||| ||||| ||| ||||||||||    
T  25421942 aggtgaatttctctaaccactaaactacttaac 25421974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 135 - 234
Target Start/End: Complemental strand, 36145069 - 36144970
Alignment:
Q  135 caatttgttagtcgaaataatctttgacgttaaaatatttgattaatattgtcttatcagttcttcaatatacttacttatcatcttattagtccttata 234  Q
    ||||||||||||| ||||| ||  ||| |||||||| ||| |||||||||||| ||| |||| ||||||||||||| ||||  || ||| ||||||||||    
T  36145069 caatttgttagtcaaaatagtccatgatgttaaaatcttttattaatattgtcatattagtttttcaatatacttagttattgtcatatcagtccttata 36144970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 378 - 500
Target Start/End: Original strand, 49619965 - 49620088
Alignment:
Q  378 gtccccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtga 476  Q
    |||||||||||||||||||||||||||||||||||||||   | | | |||||| || |||||  ||||   |||||||| ||||||| |||||| ||||    
T  49619965 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggtcggggttcagaccccggacaccccacttattcatctttaaagtga 49620064  T
Q  477 atttctttaaccgctagactactt 500  Q
    |||||| || || |||| ||||||    
T  49620065 atttctctagccactaggctactt 49620088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 378 - 416
Target Start/End: Original strand, 27054683 - 27054721
Alignment:
Q  378 gtccccatgagcttagctcatttggtaagggataatgca 416  Q
    |||||||||||||||||||||||||||||||||||||||    
T  27054683 gtccccatgagcttagctcatttggtaagggataatgca 27054721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 376 - 416
Target Start/End: Complemental strand, 2017788 - 2017748
Alignment:
Q  376 ttgtccccatgagcttagctcatttggtaagggataatgca 416  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  2017788 ttgtcctcatgagcttagctcatttggtaagggataatgca 2017748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 138 - 241
Target Start/End: Complemental strand, 5529886 - 5529783
Alignment:
Q  138 tttgttagtcgaaataatctttgacgttaaaatatttgattaatattgtcttatcagttcttcaatatacttacttatcatcttattagtccttatatat 237  Q
    |||||||||| ||||| | | |||| |||||||| ||  ||||||||||||||| ||| ||| ||||||||||||||| ||  ||| ||| ||||||| |    
T  5529886 tttgttagtcaaaatagtttctgacattaaaatacttcgttaatattgtcttattagtacttaaatatacttacttattattatatcagttcttatatgt 5529787  T
Q  238 actt 241  Q
    ||||    
T  5529786 actt 5529783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 378 - 500
Target Start/End: Complemental strand, 24253745 - 24253622
Alignment:
Q  378 gtccccatgagcttagctcatttggtaagggataatgcat-ttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtga 476  Q
    |||||||||||||||||||| ||| |||||||||||||||  | ||| |||||| || | ||||||||  | ||| |  | |||||| |||||||  |||    
T  24253745 gtccccatgagcttagctcacttgataagggataatgcataatttatgcaggggtcgggattcgaacctcagacatcttacttattcgcctttaagatga 24253646  T
Q  477 atttctttaaccgctagactactt 500  Q
    |||||| |||||| ||||||||||    
T  24253645 atttctctaaccgttagactactt 24253622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 149 - 252
Target Start/End: Complemental strand, 34827067 - 34826964
Alignment:
Q  149 aaataatctttgacgttaaaatatttgattaatattgtcttatcagttcttcaatatacttacttatcatcttattagtccttatatatacttacttatt 248  Q
    ||||| ||||||| |||||||| |||  ||||||||||| ||| |||  ||||||||||||| ||||  || ||| ||| ||||||  ||||||||||||    
T  34827067 aaatagtctttgatgttaaaatgtttcgttaatattgtcatattagtcattcaatatacttatttattgtcatatcagtacttataagtacttacttatt 34826968  T
Q  249 gtca 252  Q
    ||||    
T  34826967 gtca 34826964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 378 - 413
Target Start/End: Complemental strand, 35527603 - 35527568
Alignment:
Q  378 gtccccatgagcttagctcatttggtaagggataat 413  Q
    ||||||||||||||||||||||||||||||||||||    
T  35527603 gtccccatgagcttagctcatttggtaagggataat 35527568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 381 - 416
Target Start/End: Original strand, 47651868 - 47651903
Alignment:
Q  381 cccatgagcttagctcatttggtaagggataatgca 416  Q
    ||||||||||||||||||||||||||||||||||||    
T  47651868 cccatgagcttagctcatttggtaagggataatgca 47651903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 382 - 500
Target Start/End: Complemental strand, 10123150 - 10123032
Alignment:
Q  382 ccatgagcttagctcatttggtaagggataatgcatttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttc 481  Q
    ||||||||||| ||||||||||||||||||||     | | |  ||||| || ||||||||||| | |||||||| ||||||| |||||| |||||||||    
T  10123150 ccatgagcttaactcatttggtaagggataattacaatatgtgtaggggtcggggttcgaaccccaaacaccccacttattcatctttaaggtgaatttc 10123051  T
Q  482 tttaaccgctagactactt 500  Q
    | || || |||| ||||||    
T  10123050 tctagccactaggctactt 10123032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 378 - 416
Target Start/End: Complemental strand, 15417919 - 15417881
Alignment:
Q  378 gtccccatgagcttagctcatttggtaagggataatgca 416  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  15417919 gtccccatgagcttagctcatttggtaaaggataatgca 15417881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 378 - 416
Target Start/End: Original strand, 15550879 - 15550917
Alignment:
Q  378 gtccccatgagcttagctcatttggtaagggataatgca 416  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  15550879 gtccccatgagcttatctcatttggtaagggataatgca 15550917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 378 - 416
Target Start/End: Complemental strand, 35527437 - 35527399
Alignment:
Q  378 gtccccatgagcttagctcatttggtaagggataatgca 416  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  35527437 gtccccatgaacttagctcatttggtaagggataatgca 35527399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 374 - 416
Target Start/End: Original strand, 50064999 - 50065041
Alignment:
Q  374 aattgtccccatgagcttagctcatttggtaagggataatgca 416  Q
    |||||||||||| ||||||||||||||| ||||||||||||||    
T  50064999 aattgtccccataagcttagctcatttgataagggataatgca 50065041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 435 - 500
Target Start/End: Original strand, 52720735 - 52720800
Alignment:
Q  435 ggttcgaaccctatacaccccatttattcacctttaatgtgaatttctttaaccgctagactactt 500  Q
    ||||||||||| | ||||| || ||||||| |||||| |||||||||| ||||| |||||||||||    
T  52720735 ggttcgaaccccagacaccacacttattcatctttaaagtgaatttctctaaccactagactactt 52720800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 381 - 480
Target Start/End: Complemental strand, 23368831 - 23368731
Alignment:
Q  381 cccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatt 479  Q
    ||||||||||||||||||||| ||||||||||||||  || | | ||||| |||  ||||||||||   |||||||| |||||||| || || |||||||    
T  23368831 cccatgagcttagctcatttgataagggataatgcacattttgtgcagggaccgatgttcgaaccccggacaccccacttattcacattaaaggtgaatt 23368732  T
Q  480 t 480  Q
    |    
T  23368731 t 23368731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 176 - 252
Target Start/End: Complemental strand, 38267389 - 38267313
Alignment:
Q  176 attaatattgtcttatcagttcttcaatatacttacttatcatcttattagtccttatatatacttacttattgtca 252  Q
    |||||||||||| ||| | | |||||||||| ||||||||  || ||| ||||||||||  ||||||||||||||||    
T  38267389 attaatattgtcatattaatccttcaatatatttacttattgtcgtatcagtccttataagtacttacttattgtca 38267313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 378 - 500
Target Start/End: Original strand, 40061436 - 40061559
Alignment:
Q  378 gtccccatgagcttagctcatttggtaagggataatgc---atttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgt 474  Q
    ||||||||||||||| |||||||||||||||||| |||   || |||||  |||||| | ||||||||| |   |||||||| ||||||| |||||| ||    
T  40061436 gtccccatgagcttaactcatttggtaagggatagtgcacaatatgtat--aggggctggggttcgaactccggacaccccacttattcatctttaaggt 40061533  T
Q  475 gaatttctttaaccgctagactactt 500  Q
    | |||||| || || |||| ||||||    
T  40061534 ggatttctctagccactaggctactt 40061559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 385 - 417
Target Start/End: Original strand, 40513237 - 40513269
Alignment:
Q  385 tgagcttagctcatttggtaagggataatgcat 417  Q
    |||||||||||||||||||||||||||||||||    
T  40513237 tgagcttagctcatttggtaagggataatgcat 40513269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 381 - 500
Target Start/End: Complemental strand, 48497312 - 48497192
Alignment:
Q  381 cccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatt 479  Q
    |||||||| |||||||||||||||||||||||||||   | | | |||||||||  ||||||| ||   |||| ||||||||||| |||||| || ||||    
T  48497312 cccatgagtttagctcatttggtaagggataatgcacaatatgtgcaggggccggagttcgaatcccggacactccatttattcatctttaaggtaaatt 48497213  T
Q  480 tctttaaccgctagactactt 500  Q
    ||| || || |||| ||||||    
T  48497212 tctctagccactaggctactt 48497192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 414
Target Start/End: Complemental strand, 16986027 - 16985992
Alignment:
Q  379 tccccatgagcttagctcatttggtaagggataatg 414  Q
    |||||||||| |||||||||||||||||||||||||    
T  16986027 tccccatgagtttagctcatttggtaagggataatg 16985992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 417
Target Start/End: Original strand, 48813727 - 48813766
Alignment:
Q  378 gtccccatgagcttagctcatttggtaagggataatgcat 417  Q
    |||||||||||||||  |||||||||||||||||||||||    
T  48813727 gtccccatgagcttatttcatttggtaagggataatgcat 48813766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 376 - 414
Target Start/End: Complemental strand, 4684281 - 4684243
Alignment:
Q  376 ttgtccccatgagcttagctcatttggtaagggataatg 414  Q
    ||||||||| ||||||| |||||||||||||||||||||    
T  4684281 ttgtccccacgagcttacctcatttggtaagggataatg 4684243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 129 - 215
Target Start/End: Complemental strand, 8069161 - 8069075
Alignment:
Q  129 attgtacaatttgttagtcgaaataatctttgacgttaaaatatttgattaatattgtcttatcagttcttcaatatacttacttat 215  Q
    |||||||| || ||||||| |||||||| || |  |||||||||||  ||||||||||| ||| | | | |||||||||||||||||    
T  8069161 attgtacatttcgttagtcaaaataatccttaatattaaaatattttgttaatattgtcatattaatccatcaatatacttacttat 8069075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 381 - 482
Target Start/End: Complemental strand, 14262820 - 14262718
Alignment:
Q  381 cccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatt 479  Q
    |||||||| ||| |||||||| ||||||||||||||   | ||| |||||| || |||||||||||   |||||| | ||||||| |||||| |||||||    
T  14262820 cccatgagattaactcatttgataagggataatgcacaatatatgcaggggtcggggttcgaaccccggacaccctacttattcatctttaaggtgaatt 14262721  T
Q  480 tct 482  Q
    |||    
T  14262720 tct 14262718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 378 - 416
Target Start/End: Complemental strand, 22386338 - 22386300
Alignment:
Q  378 gtccccatgagcttagctcatttggtaagggataatgca 416  Q
    ||||||| ||||||||||||||||||||||||| |||||    
T  22386338 gtccccacgagcttagctcatttggtaagggattatgca 22386300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 384 - 500
Target Start/End: Original strand, 30735827 - 30735944
Alignment:
Q  384 atgagcttagctcatttggtaagggataatgc---atttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaattt 480  Q
    ||||||||| ||||||||||||||||||||||   |||||  | |||||||||  ||| |||||||  ||||| || ||||||| ||  || ||||||||    
T  30735827 atgagcttaactcatttggtaagggataatgcacaatttg--tgcaggggccggagtttgaaccctggacaccacacttattcatctcaaaggtgaattt 30735924  T
Q  481 ctttaaccgctagactactt 500  Q
    || ||||| |||| ||||||    
T  30735925 ctctaaccactaggctactt 30735944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 379 - 456
Target Start/End: Complemental strand, 35605695 - 35605618
Alignment:
Q  379 tccccatgagcttagctcatttggtaagggataatgcat-ttgtatccaggggccgtggttcgaaccctatacacccca 456  Q
    ||||| ||||||||||||| |||||| |||||| ||||| || ||| |||||| || ||||||||||||| ||||||||    
T  35605695 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggggtcggggttcgaaccctaaacacccca 35605618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 435 - 485
Target Start/End: Complemental strand, 47428939 - 47428889
Alignment:
Q  435 ggttcgaaccctatacaccccatttattcacctttaatgtgaatttcttta 485  Q
    ||||||||||| | |||||||| ||||||| |||||| |||||||||||||    
T  47428939 ggttcgaaccccaaacaccccacttattcatctttaaagtgaatttcttta 47428889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 129 - 215
Target Start/End: Complemental strand, 50155800 - 50155714
Alignment:
Q  129 attgtacaatttgttagtcgaaataatctttgacgttaaaatatttgattaatattgtcttatcagttcttcaatatacttacttat 215  Q
    |||||||||||  |||||| ||||| ||  |||  ||||||| ||| |||||||||||| ||||| | |||||||| ||||||||||    
T  50155800 attgtacaattcattagtcaaaatagtcactgatattaaaatgtttcattaatattgtcctatcaatgcttcaatacacttacttat 50155714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 417
Target Start/End: Complemental strand, 2466037 - 2465996
Alignment:
Q  376 ttgtccccatgagcttagctcatttggtaagggataatgcat 417  Q
    ||||||||||| | ||||||||||||||||||||| ||||||    
T  2466037 ttgtccccatgtgtttagctcatttggtaagggatgatgcat 2465996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 210
Target Start/End: Original strand, 9890601 - 9890682
Alignment:
Q  129 attgtacaatttgttagtcgaaataatctttgacgttaaaatatttgattaatattgtcttatcagttcttcaatatactta 210  Q
    |||||||| || ||||||| |||||||| || || ||| |||| ||  ||||||||||| ||| ||| ||||||||||||||    
T  9890601 attgtacatttcgttagtcaaaataatccttaacattagaatacttcgttaatattgtcatattagtccttcaatatactta 9890682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 186
Target Start/End: Complemental strand, 27900928 - 27900871
Alignment:
Q  129 attgtacaatttgttagtcgaaataatctttgacgttaaaatatttgattaatattgt 186  Q
    ||||| ||||| ||||||||||||| ||  |||||||||||| ||| |||||||||||    
T  27900928 attgtgcaattagttagtcgaaatagtccatgacgttaaaatgtttcattaatattgt 27900871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 482
Target Start/End: Original strand, 39238707 - 39238814
Alignment:
Q  376 ttgtccccatgagcttagctcatttggtaagggataatgcatt--tgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatg 473  Q
    |||||||| ||||| ||||||| |||| | |||| ||||||||  | ||| ||||||||| |||||||||||   |||||||| |||||||| || || |    
T  39238707 ttgtccccgtgagcatagctcagttggca-gggacaatgcattattatatgcaggggccgaggttcgaaccccggacaccccacttattcactttaaaag 39238805  T
Q  474 tgaatttct 482  Q
    |||||||||    
T  39238806 tgaatttct 39238814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 500
Target Start/End: Complemental strand, 42946543 - 42946446
Alignment:
Q  404 aagggataatgcat-ttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttctttaaccgctagactactt 500  Q
    |||||||||||||| || ||| ||||||| | |||| ||||||   |||||||| ||||||||||| || |||||||||| || ||| ||| ||||||    
T  42946543 aagggataatgcatattatatgcaggggctggggtttgaaccccggacaccccacttattcaccttaaaggtgaatttctctagccgttaggctactt 42946446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 473
Target Start/End: Complemental strand, 52426979 - 52426891
Alignment:
Q  385 tgagcttagctcatttggtaagggataatgcat-ttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatg 473  Q
    ||||||||||||| ||| || |||||| ||||| || ||| ||||||||||||||||||| | | ||||||||||| | ||| |||||||    
T  52426979 tgagcttagctcagttgata-gggatattgcatattatatgcaggggccgtggttcgaactccagacaccccatttctccacatttaatg 52426891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 6e-23; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 378 - 493
Target Start/End: Original strand, 17855643 - 17855758
Alignment:
Q  378 gtccccatgagcttagctcatttggtaagggataatgcatttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaa 477  Q
    |||||||| |||||| ||||||||||| | |||||||||||||||| ||||||||| |||||||||||   |||||||| |||||||| ||||| |||||    
T  17855643 gtccccataagcttaactcatttggtaggcgataatgcatttgtatgcaggggccggggttcgaaccccggacaccccacttattcacatttaaagtgaa 17855742  T
Q  478 tttctttaaccgctag 493  Q
    ||| | || |||||||    
T  17855743 tttttctagccgctag 17855758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 385 - 500
Target Start/End: Complemental strand, 39172307 - 39172192
Alignment:
Q  385 tgagcttagctcatttggtaagggataatgcatttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttcttt 484  Q
    |||||||| |||||||||||| |||||||||||||||||  || |||||  ||||||| ||   ||||||||||||||||||||||| ||||||||||||    
T  39172307 tgagcttaactcatttggtaaaggataatgcatttgtatgtagaggccgaagttcgaatcccggacaccccatttattcacctttaaagtgaatttcttt 39172208  T
Q  485 aaccgctagactactt 500  Q
    | || |||| ||||||    
T  39172207 agcccctaggctactt 39172192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 376 - 482
Target Start/End: Complemental strand, 41454931 - 41454824
Alignment:
Q  376 ttgtccccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgt 474  Q
    |||||||||||||||||||||||||||||||||||||||||   | | | ||||||||| |||||||||||   |||||||| ||||||| |||||||||    
T  41454931 ttgtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaatgt 41454832  T
Q  475 gaatttct 482  Q
    ||||||||    
T  41454831 gaatttct 41454824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 376 - 482
Target Start/End: Original strand, 32822107 - 32822213
Alignment:
Q  376 ttgtccccatgagcttagctcatttggtaagggataatgcatttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtg 475  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||  |||||| |  |||||||||| | ||| |||| | |||||| ||||| |||    
T  32822107 ttgtccccatgagcttaactcatttggtaagggataatgcatttgtatataggggcgggagttcgaaccccagacatcccactcattcacttttaaggtg 32822206  T
Q  476 aatttct 482  Q
    |||||||    
T  32822207 aatttct 32822213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 383 - 500
Target Start/End: Complemental strand, 10621472 - 10621354
Alignment:
Q  383 catgagcttagctcatttggtaagggataatgcatt-tgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttc 481  Q
    ||||||||||||||| ||| |||||||||||||||| ||||| |||||| |  |||| ||||||   ||||||||||| |||||||||||||||||||||    
T  10621472 catgagcttagctcacttgataagggataatgcattatgtatgcaggggtcagggtttgaaccccggacaccccattttttcacctttaatgtgaatttc 10621373  T
Q  482 tttaaccgctagactactt 500  Q
    ||   ||||||| ||||||    
T  10621372 ttccgccgctaggctactt 10621354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 379 - 482
Target Start/End: Original strand, 1032564 - 1032668
Alignment:
Q  379 tccccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaa 477  Q
    ||||||||||||||||||||||||||||||||||||||   | | | ||||||| | ||||||||||| | |||||||| ||||||| |||||| |||||    
T  1032564 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccagacaccccacttattcatctttaaggtgaa 1032663  T
Q  478 tttct 482  Q
    |||||    
T  1032664 tttct 1032668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 389 - 500
Target Start/End: Complemental strand, 19957412 - 19957300
Alignment:
Q  389 cttagctcatttggtaagggataatgcat-ttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttctttaac 487  Q
    ||||||||| ||||||||||||||||||| || ||| |||||| || |||||||||||   |||||||| |||||||||||||| |||||||||| || |    
T  19957412 cttagctcacttggtaagggataatgcatattatatgcaggggacgaggttcgaaccccggacaccccacttattcacctttaaggtgaatttctctagc 19957313  T
Q  488 cgctagactactt 500  Q
     ||||| ||||||    
T  19957312 agctaggctactt 19957300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 149 - 252
Target Start/End: Complemental strand, 33508687 - 33508584
Alignment:
Q  149 aaataatctttgacgttaaaatatttgattaatattgtcttatcagttcttcaatatacttacttatcatcttattagtccttatatatacttacttatt 248  Q
    ||||||||| |||| |||||||| || ||||||||| || ||| ||| ||||||||||||||||||| ||  ||| |||  |||||| ||||||||||||    
T  33508687 aaataatctctgacattaaaatacttcattaatattatcgtattagtccttcaatatacttacttattattatatcagttattatatgtacttacttatt 33508588  T
Q  249 gtca 252  Q
    ||||    
T  33508587 gtca 33508584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 376 - 485
Target Start/End: Complemental strand, 41845533 - 41845423
Alignment:
Q  376 ttgtccccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgt 474  Q
    ||||| |||||||||||||||||||||||||||||||||||   | | | |||||  || |||||||||||   |||||| ||||||||| |||||| ||    
T  41845533 ttgtctccatgagcttagctcatttggtaagggataatgcacaatatgtgcagggatcggggttcgaaccccgaacaccctatttattcatctttaaggt 41845434  T
Q  475 gaatttcttta 485  Q
    |||||||||||    
T  41845433 gaatttcttta 41845423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 377 - 500
Target Start/End: Complemental strand, 44828536 - 44828411
Alignment:
Q  377 tgtccccatgagcttagctcatttggtaagggataatgc---atttgtatccaggggccgtggttcgaaccctatacaccccatttattca-cctttaat 472  Q
    |||||||||||||||||||||||||||||||||||||||   |||||  | ||||| | | ||||||||||| | ||||| || ||||||| | |||||     
T  44828536 tgtccccatgagcttagctcatttggtaagggataatgcacaatttg--tgcagggtctggggttcgaaccccagacaccacacttattcatcttttaag 44828439  T
Q  473 gtgaatttctttaaccgctagactactt 500  Q
    ||||||||||||| ||  ||||||||||    
T  44828438 gtgaatttctttagccattagactactt 44828411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 378 - 488
Target Start/End: Complemental strand, 19733171 - 19733060
Alignment:
Q  378 gtccccatgagcttagctcatttggtaagggataatgcat-ttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtga 476  Q
    |||||||| |||||||||||||||||||||||||||||||  | ||| |||||| || |||||||| ||   |||||  | ||||||| |||||| ||||    
T  19733171 gtccccataagcttagctcatttggtaagggataatgcataatatatgcaggggtcggggttcgaatcccgaacacctaaattattcatctttaaggtga 19733072  T
Q  477 atttctttaacc 488  Q
    |||||| |||||    
T  19733071 atttctctaacc 19733060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 374 - 464
Target Start/End: Original strand, 23139063 - 23139154
Alignment:
Q  374 aattgtccccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattca 464  Q
    ||||||||||||||||||||||||||||  |||||||||||||   ||| | ||||||||| ||||||||| | | |||||||| |||||||    
T  23139063 aattgtccccatgagcttagctcatttgacaagggataatgcacaatgtgtgcaggggccgaggttcgaacaccagacaccccacttattca 23139154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 376 - 482
Target Start/End: Complemental strand, 38289339 - 38289232
Alignment:
Q  376 ttgtccccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgt 474  Q
    |||| ||||| ||||||||||||||||||||||||||||||   | | | |||||| || ||||||||||  | |||||||| ||||||| |||||| ||    
T  38289339 ttgttcccataagcttagctcatttggtaagggataatgcacaatatgtgcaggggtcggggttcgaacctcaaacaccccacttattcatctttaaggt 38289240  T
Q  475 gaatttct 482  Q
    ||||||||    
T  38289239 gaatttct 38289232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 129 - 215
Target Start/End: Complemental strand, 1249302 - 1249216
Alignment:
Q  129 attgtacaatttgttagtcgaaataatctttgacgttaaaatatttgattaatattgtcttatcagttcttcaatatacttacttat 215  Q
    |||||||| || ||||||| ||||||||| | || |||||||||||  |||||| |||| ||||||| |||||||||| ||||||||    
T  1249302 attgtacatttcgttagtcaaaataatctataacattaaaatattttgttaatactgtcatatcagtacttcaatatatttacttat 1249216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 378 - 416
Target Start/End: Complemental strand, 13906728 - 13906690
Alignment:
Q  378 gtccccatgagcttagctcatttggtaagggataatgca 416  Q
    |||||||||||||||||||||||||||||||||||||||    
T  13906728 gtccccatgagcttagctcatttggtaagggataatgca 13906690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 374 - 416
Target Start/End: Original strand, 30466668 - 30466710
Alignment:
Q  374 aattgtccccatgagcttagctcatttggtaagggataatgca 416  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  30466668 aattgtccccatgagcttagctcatttggtaagggctaatgca 30466710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 376 - 500
Target Start/End: Original strand, 38063968 - 38064093
Alignment:
Q  376 ttgtccccatgagcttagctcatttggtaagggataatgc---atttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaat 472  Q
    |||||||||||||||||  |||||||||||||||||||||   |||||  | ||||| | | || | |||||| | |||||||| ||||||| ||||||     
T  38063968 ttgtccccatgagcttaattcatttggtaagggataatgcacaatttg--tgcagggactgggggttgaaccccagacaccccacttattcatctttaag 38064065  T
Q  473 gtgaatttctttaaccgctagactactt 500  Q
    |||||||||| ||||| || ||||||||    
T  38064066 gtgaatttctctaaccactggactactt 38064093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 377 - 500
Target Start/End: Original strand, 4259851 - 4259975
Alignment:
Q  377 tgtccccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtg 475  Q
    ||||| |||||||||| |||||||||||||||||||||||   | | | ||||||||| ||||| |||||   || ||||| ||||||| |||||| |||    
T  4259851 tgtccgcatgagcttaactcatttggtaagggataatgcacaatatgtgcaggggccggggttccaaccccggactccccacttattcatctttaaggtg 4259950  T
Q  476 aatttctttaaccgctagactactt 500  Q
    ||||||| || || |||| ||||||    
T  4259951 aatttctctagccactaggctactt 4259975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 384 - 482
Target Start/End: Complemental strand, 11052680 - 11052581
Alignment:
Q  384 atgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttct 482  Q
    ||||||||| |||||||||||||||||||||||  |  | | ||||||||  |||  |||||||| |||||||| ||||||| |||||| ||||||||||    
T  11052680 atgagcttaactcatttggtaagggataatgcacatattgtgcaggggccaaggtgtgaaccctaaacaccccacttattcatctttaaggtgaatttct 11052581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 378 - 416
Target Start/End: Original strand, 10161957 - 10161995
Alignment:
Q  378 gtccccatgagcttagctcatttggtaagggataatgca 416  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  10161957 gtccccatgagcttagctcatctggtaagggataatgca 10161995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 382 - 482
Target Start/End: Original strand, 22652680 - 22652781
Alignment:
Q  382 ccatgagcttagctcatttggtaagggataatgcat-ttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaattt 480  Q
    |||||||||||||||||||| |||||||||||||||  | | | |||||||||  ||||||||||   |||||||| |||||||  || || ||||||||    
T  22652680 ccatgagcttagctcatttgataagggataatgcataatttgtgcaggggccggtgttcgaaccccggacaccccaattattcatgttaaaggtgaattt 22652779  T
Q  481 ct 482  Q
    ||    
T  22652780 ct 22652781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 449 - 485
Target Start/End: Complemental strand, 11690984 - 11690948
Alignment:
Q  449 acaccccatttattcacctttaatgtgaatttcttta 485  Q
    ||||||||||||||||||||||| |||||||||||||    
T  11690984 acaccccatttattcacctttaaggtgaatttcttta 11690948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 163 - 215
Target Start/End: Original strand, 21600517 - 21600569
Alignment:
Q  163 gttaaaatatttgattaatattgtcttatcagttcttcaatatacttacttat 215  Q
    |||||||||||| |||||||||||| |||  || |||||||||||||||||||    
T  21600517 gttaaaatatttcattaatattgtcatatttgtccttcaatatacttacttat 21600569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 378 - 418
Target Start/End: Original strand, 31220337 - 31220377
Alignment:
Q  378 gtccccatgagcttagctcatttggtaagggataatgcatt 418  Q
    |||||| ||||||||||||| ||||||||||||||||||||    
T  31220337 gtccccgtgagcttagctcacttggtaagggataatgcatt 31220377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 449 - 492
Target Start/End: Original strand, 8145838 - 8145881
Alignment:
Q  449 acaccccatttattcacctttaatgtgaatttctttaaccgcta 492  Q
    |||||||| |||||||||||||| |||||||||| |||||||||    
T  8145838 acaccccacttattcacctttaaggtgaatttctctaaccgcta 8145881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 375 - 417
Target Start/End: Original strand, 40444695 - 40444737
Alignment:
Q  375 attgtccccatgagcttagctcatttggtaagggataatgcat 417  Q
    ||||||| | ||||||||||||| |||||||||||||||||||    
T  40444695 attgtccacgtgagcttagctcacttggtaagggataatgcat 40444737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 386 - 416
Target Start/End: Complemental strand, 43456746 - 43456716
Alignment:
Q  386 gagcttagctcatttggtaagggataatgca 416  Q
    |||||||||||||||||||||||||||||||    
T  43456746 gagcttagctcatttggtaagggataatgca 43456716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 482
Target Start/End: Original strand, 10201259 - 10201360
Alignment:
Q  382 ccatgagcttagctcatttggtaagggataatgcatt-tgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaattt 480  Q
    ||||||| |||| | | |||||||| ||||||||||  | |||  ||||| || |||||||||||   ||||| ||||||||||||||||| ||||||||    
T  10201259 ccatgagtttagtttagttggtaagagataatgcataatatatgtaggggtcggggttcgaaccccggacacctcatttattcacctttaaagtgaattt 10201358  T
Q  481 ct 482  Q
    ||    
T  10201359 ct 10201360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 252
Target Start/End: Original strand, 42659910 - 42660007
Alignment:
Q  155 tctttgacgttaaaatatttgattaatattgtcttatcagttcttcaatatacttacttatcatcttattagtccttatatatacttacttattgtca 252  Q
    |||||||  ||||||| ||| || ||||||||| ||| |||  ||||||||||||||||||  ||  || ||||||||||   |||||||||||||||    
T  42659910 tctttgatattaaaatgtttcatcaatattgtcatattagtcattcaatatacttacttattgtcacatcagtccttataagcacttacttattgtca 42660007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 138 - 234
Target Start/End: Original strand, 2986969 - 2987065
Alignment:
Q  138 tttgttagtcgaaataatctttgacgttaaaatatttgattaatattgtcttatcagttcttcaatatacttacttatcatcttattagtccttata 234  Q
    |||||||||| ||||| | ||| | |||||||| ||| ||||||| | || ||| |||  ||||||||||||||||||  || || |||||||||||    
T  2986969 tttgttagtcaaaatagtatttaatgttaaaatgtttcattaatactatcatattagtctttcaatatacttacttattgtcatactagtccttata 2987065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 176 - 252
Target Start/End: Original strand, 7604021 - 7604097
Alignment:
Q  176 attaatattgtcttatcagttcttcaatatacttacttatcatcttattagtccttatatatacttacttattgtca 252  Q
    |||||||||||| ||| | |  ||||||||| ||||||||  || || ||||| ||||||||| |||||||||||||    
T  7604021 attaatattgtcatattaatctttcaatatatttacttattgtcatactagtctttatatatatttacttattgtca 7604097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 376 - 416
Target Start/End: Original strand, 29114093 - 29114133
Alignment:
Q  376 ttgtccccatgagcttagctcatttggtaagggataatgca 416  Q
    |||| ||||||| ||||||||||||| ||||||||||||||    
T  29114093 ttgttcccatgaacttagctcatttgataagggataatgca 29114133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 6e-23; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 389 - 500
Target Start/End: Original strand, 7164699 - 7164810
Alignment:
Q  389 cttagctcatttggtaagggataatgcatttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttctttaacc 488  Q
    ||||||||||||| ||||||||||||||||| |||  ||||||||  ||||||||||    ||||||| |||||||||||||| |||||||||| || ||    
T  7164699 cttagctcatttgataagggataatgcatttatatgtaggggccggagttcgaaccccgaccaccccacttattcacctttaaggtgaatttctctagcc 7164798  T
Q  489 gctagactactt 500  Q
    ||||||||||||    
T  7164799 gctagactactt 7164810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 377 - 500
Target Start/End: Complemental strand, 6228363 - 6228239
Alignment:
Q  377 tgtccccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtg 475  Q
    ||||||||||||||||||||||||||||||||||||||||   | | | ||||||||| |||||||||||   |||||||| ||||||| |||||| |||    
T  6228363 tgtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaaggtg 6228264  T
Q  476 aatttctttaaccgctagactactt 500  Q
    ||||||| || || |||| ||||||    
T  6228263 aatttctctagccactaggctactt 6228239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 374 - 500
Target Start/End: Complemental strand, 4854412 - 4854285
Alignment:
Q  374 aattgtccccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaat 472  Q
    ||||||||||||||||||||||||||||| ||||||||||| |   ||| | ||||||||| |||||||||||   |||||||| ||||||| ||||||     
T  4854412 aattgtccccatgagcttagctcatttggcaagggataatgtacaatgtgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaag 4854313  T
Q  473 gtgaatttctttaaccgctagactactt 500  Q
    || ||||||| ||||| |||| ||||||    
T  4854312 gtaaatttctctaaccactagcctactt 4854285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 397 - 480
Target Start/End: Original strand, 9455852 - 9455935
Alignment:
Q  397 atttggtaagggataatgcatttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaattt 480  Q
    |||||||||||||||||||||||||||  ||||| ||  |||||||||| | |||||||| ||||||||||||||  |||||||    
T  9455852 atttggtaagggataatgcatttgtatgtaggggtcggagttcgaaccccaaacaccccacttattcacctttaagttgaattt 9455935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 378 - 500
Target Start/End: Complemental strand, 18903469 - 18903346
Alignment:
Q  378 gtccccatgagcttagctcatttggtaagggataatgcatt-tgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtga 476  Q
    ||||||||||||||||||||||||| |||||||||| ||   | | | ||||||||| |||||||||||   |||||||| ||||||| |||||| ||||    
T  18903469 gtccccatgagcttagctcatttggcaagggataatacacaatatgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaaggtga 18903370  T
Q  477 atttctttaaccgctagactactt 500  Q
    |||||| || || |||| ||||||    
T  18903369 atttctctagccactaggctactt 18903346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 407 - 503
Target Start/End: Original strand, 32344662 - 32344758
Alignment:
Q  407 ggataatgcatttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttctttaaccgctagactacttaac 503  Q
    |||||||| |||||||| ||||||  | ||||||||| |   |||||||| |||||||||||||| ||||||||| ||| ||| |||||||||||||    
T  32344662 ggataatgtatttgtatgcaggggttggggttcgaactccggacaccccacttattcacctttaaagtgaatttccttagccgttagactacttaac 32344758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 378 - 416
Target Start/End: Complemental strand, 15717115 - 15717077
Alignment:
Q  378 gtccccatgagcttagctcatttggtaagggataatgca 416  Q
    |||||||||||||||||||||||||||||||||||||||    
T  15717115 gtccccatgagcttagctcatttggtaagggataatgca 15717077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 380 - 417
Target Start/End: Original strand, 17216953 - 17216990
Alignment:
Q  380 ccccatgagcttagctcatttggtaagggataatgcat 417  Q
    ||||||||||||||||||||||||||||||||||||||    
T  17216953 ccccatgagcttagctcatttggtaagggataatgcat 17216990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 379 - 482
Target Start/End: Complemental strand, 20415663 - 20415559
Alignment:
Q  379 tccccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaa 477  Q
    |||||||||| ||||||||||| |||||||||||||||   | | | ||||||||  |||||||||||   |||||||| ||||||| |||||| |||||    
T  20415663 tccccatgagtttagctcattttgtaagggataatgcacaatatgtgcaggggccagggttcgaaccccggacaccccacttattcatctttaaggtgaa 20415564  T
Q  478 tttct 482  Q
    |||||    
T  20415563 tttct 20415559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 446
Target Start/End: Original strand, 24466825 - 24466893
Alignment:
Q  378 gtccccatgagcttagctcatttggtaagggataatgcatttgtatccaggggccgtggttcgaaccct 446  Q
    |||||||| ||||||||||||||||| | ||||||||||| | ||| |||||| || ||||||||||||    
T  24466825 gtccccataagcttagctcatttggtgaaggataatgcatatatatgcaggggacggggttcgaaccct 24466893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 449 - 500
Target Start/End: Complemental strand, 5641720 - 5641669
Alignment:
Q  449 acaccccatttattcacctttaatgtgaatttctttaaccgctagactactt 500  Q
    |||||||| |||||||||||||| |||||||||| || ||||||||||||||    
T  5641720 acaccccacttattcacctttaaggtgaatttctctagccgctagactactt 5641669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 138 - 257
Target Start/End: Complemental strand, 10067737 - 10067617
Alignment:
Q  138 tttgttagtcgaaataatctttgacgttaaaatatttgattaatattgtcttatcagttcttcaatatacttactta-tcatcttattagtccttatata 236  Q
    ||||||| || ||||| ||| |||| |||||||| ||  ||||||||||| ||| |||  ||||||||||||||||| |  || ||| ||||||||||      
T  10067737 tttgttaatcaaaatagtctctgacattaaaatactttgttaatattgtcatattagtcattcaatatacttacttatttgtcatatcagtccttataat 10067638  T
Q  237 tacttacttattgtcacttca 257  Q
    |||||||| ||||||| ||||    
T  10067637 tacttactaattgtcatttca 10067617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 426 - 482
Target Start/End: Original strand, 11611411 - 11611467
Alignment:
Q  426 aggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttct 482  Q
    |||||| | ||||||||||||  |||||||| ||||||| |||||||||||||||||    
T  11611411 aggggctggggttcgaaccctggacaccccacttattcatctttaatgtgaatttct 11611467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 376 - 416
Target Start/End: Complemental strand, 18618643 - 18618603
Alignment:
Q  376 ttgtccccatgagcttagctcatttggtaagggataatgca 416  Q
    ||||||||||||||||||||||||||||||  |||||||||    
T  18618643 ttgtccccatgagcttagctcatttggtaaaagataatgca 18618603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 384 - 416
Target Start/End: Complemental strand, 24794991 - 24794959
Alignment:
Q  384 atgagcttagctcatttggtaagggataatgca 416  Q
    |||||||||||||||||||||||||||||||||    
T  24794991 atgagcttagctcatttggtaagggataatgca 24794959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 482
Target Start/End: Complemental strand, 14981804 - 14981699
Alignment:
Q  378 gtccccatgagcttagctcatttggtaagggataatgcatt--tgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtg 475  Q
    |||||| ||||| ||||||| |||| | |||| ||||||||  | ||| ||||||||| ||||||||||||  |||||||| |||||||| || || |||    
T  14981804 gtccccgtgagcatagctcagttggca-gggacaatgcattattatatgcaggggccggggttcgaaccctggacaccccacttattcactttaaaagtg 14981706  T
Q  476 aatttct 482  Q
    |||||||    
T  14981705 aatttct 14981699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 382 - 413
Target Start/End: Original strand, 25045737 - 25045768
Alignment:
Q  382 ccatgagcttagctcatttggtaagggataat 413  Q
    ||||||||||||||||||||||||||||||||    
T  25045737 ccatgagcttagctcatttggtaagggataat 25045768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 215
Target Start/End: Original strand, 31142032 - 31142083
Alignment:
Q  164 ttaaaatatttgattaatattgtcttatcagttcttcaatatacttacttat 215  Q
    |||||||| || |||||||||||| ||||||| |||||||||| ||||||||    
T  31142032 ttaaaatacttcattaatattgtcatatcagtacttcaatatatttacttat 31142083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 6699489 - 6699555
Alignment:
Q  149 aaataatctttgacgttaaaatatttgattaatattgtcttatcagttcttcaatatacttacttat 215  Q
    ||||||||||| |||||||||||||| |||| ||||||  ||| ||| | ||||||||| |||||||    
T  6699489 aaataatcttttacgttaaaatatttcattagtattgtgatattagtccatcaatatacgtacttat 6699555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 129 - 215
Target Start/End: Complemental strand, 25085110 - 25085024
Alignment:
Q  129 attgtacaatttgttagtcgaaataatctttgacgttaaaatatttgattaatattgtcttatcagttcttcaatatacttacttat 215  Q
    ||||| || |||||||||| ||||| ||||| || |||||||| ||  ||||||||||| ||| | |  ||||||||||||||||||    
T  25085110 attgtgcactttgttagtcaaaatagtctttaacattaaaataatttgttaatattgtcatattattctttcaatatacttacttat 25085024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 423
Target Start/End: Complemental strand, 4096661 - 4096621
Alignment:
Q  382 ccatgagcttagctcatttggtaagggataatgcatttgtat 423  Q
    |||||||||||||||||||||||||||||  |||||||||||    
T  4096661 ccatgagcttagctcatttggtaagggat-ttgcatttgtat 4096621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 257
Target Start/End: Complemental strand, 16431647 - 16431554
Alignment:
Q  164 ttaaaatatttgattaatattgtcttatcagttcttcaatatacttacttatcatcttattagtccttatatatacttacttattgtcacttca 257  Q
    |||||||| || | |||||||||| ||| |||  ||||||||||||||||||  || ||| |||||||  |  |||||||||||||||| ||||    
T  16431647 ttaaaataattcactaatattgtcatattagtcattcaatatacttacttattgtcatatcagtccttcaaattacttacttattgtcatttca 16431554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 416
Target Start/End: Complemental strand, 21874322 - 21874285
Alignment:
Q  379 tccccatgagcttagctcatttggtaagggataatgca 416  Q
    ||||||| |||||| |||||||||||||||||||||||    
T  21874322 tccccataagcttaactcatttggtaagggataatgca 21874285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 414
Target Start/End: Complemental strand, 30422207 - 30422174
Alignment:
Q  381 cccatgagcttagctcatttggtaagggataatg 414  Q
    |||||||||||| |||||||||||||||||||||    
T  30422207 cccatgagcttaactcatttggtaagggataatg 30422174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 377 - 482
Target Start/End: Original strand, 9064858 - 9064964
Alignment:
Q  377 tgtccccatgagcttagctcatttggtaagggataatgcatt--tgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgt 474  Q
    ||||||| ||||| ||||||| |||| | |||| ||||||||  | ||| ||||||||| ||||||||||| | |||||||| ||||| || || || ||    
T  9064858 tgtccccgtgagcatagctcagttggca-gggacaatgcattattatatgcaggggccggggttcgaaccccagacaccccacttatttactttaaaagt 9064956  T
Q  475 gaatttct 482  Q
    ||||||||    
T  9064957 gaatttct 9064964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 159 - 215
Target Start/End: Complemental strand, 9307459 - 9307403
Alignment:
Q  159 tgacgttaaaatatttgattaatattgtcttatcagttcttcaatatacttacttat 215  Q
    |||| |||||||| || ||||| |||||| ||| ||| |||||||||||||||||||    
T  9307459 tgacattaaaataattcattaacattgtcatattagtccttcaatatacttacttat 9307403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 388 - 416
Target Start/End: Original strand, 19748102 - 19748130
Alignment:
Q  388 gcttagctcatttggtaagggataatgca 416  Q
    |||||||||||||||||||||||||||||    
T  19748102 gcttagctcatttggtaagggataatgca 19748130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 1e-21; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 376 - 500
Target Start/End: Complemental strand, 38503361 - 38503236
Alignment:
Q  376 ttgtccccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgt 474  Q
    |||||||||||||||||||||||||||||||||||||||||   | | | ||||||||| |||||||||||   |||||||| ||||||| |||||| ||    
T  38503361 ttgtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaaggt 38503262  T
Q  475 gaatttctttaaccgctagactactt 500  Q
    |||||||| || ||  ||||||||||    
T  38503261 gaatttctctagccaatagactactt 38503236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 379 - 482
Target Start/End: Original strand, 31250141 - 31250245
Alignment:
Q  379 tccccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaa 477  Q
    ||||||||||||||||||||||||||||||||||||||   | | | ||||||||| |||||||||||   |||||||| ||||||| |||||| |||||    
T  31250141 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaaggtgaa 31250240  T
Q  478 tttct 482  Q
    |||||    
T  31250241 tttct 31250245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 385 - 500
Target Start/End: Original strand, 20191442 - 20191557
Alignment:
Q  385 tgagcttagctcatttggtaagggataatgcatttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttcttt 484  Q
    |||||||| |||| ||||||||||||||||||||| ||| |||||| || |||||||||||   |||| ||| |||||||||||||| || ||||||| |    
T  20191442 tgagcttaactcacttggtaagggataatgcatttatatgcaggggtcggggttcgaaccccggacactccacttattcacctttaaggtaaatttctct 20191541  T
Q  485 aaccgctagactactt 500  Q
      || |||||||||||    
T  20191542 ggccactagactactt 20191557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 129 - 252
Target Start/End: Original strand, 27001197 - 27001320
Alignment:
Q  129 attgtacaatttgttagtcgaaataatctttgacgttaaaatatttgattaatattgtcttatcagttcttcaatatacttacttatcatcttattagtc 228  Q
    ||||| ||||||||||||| ||||| ||||||| ||||||||| || |||||||||||| ||| |   | |||||||||||||||||  || ||| ||||    
T  27001197 attgtgcaatttgttagtcaaaatagtctttgatgttaaaatacttcattaatattgtcatattaccccgtcaatatacttacttattgtcatatcagtc 27001296  T
Q  229 cttatatatacttacttattgtca 252  Q
     ||||| ||||||| |||||||||    
T  27001297 tttataaatacttaattattgtca 27001320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 379 - 482
Target Start/End: Original strand, 43227860 - 43227964
Alignment:
Q  379 tccccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaa 477  Q
    |||| |||||||||||||||||||||||||||||||||   | | | ||||||||| |||||||||||   |||||||| ||||||| |||||| |||||    
T  43227860 tccctatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaaggtgaa 43227959  T
Q  478 tttct 482  Q
    |||||    
T  43227960 tttct 43227964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 394 - 500
Target Start/End: Original strand, 34729481 - 34729587
Alignment:
Q  394 ctcatttggtaagggataatgcat-ttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttctttaaccgcta 492  Q
    |||| ||||||||||||||||||| || ||| |||||| || |||||||||||   |||||||| |||||||||||||| |||||||||| ||||||||     
T  34729481 ctcacttggtaagggataatgcatattatatgcaggggtcggggttcgaacccgg-acaccccacttattcacctttaaggtgaatttctctaaccgctt 34729579  T
Q  493 gactactt 500  Q
     |||||||    
T  34729580 aactactt 34729587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 378 - 482
Target Start/End: Complemental strand, 4395953 - 4395848
Alignment:
Q  378 gtccccatgagcttagctcatttggtaagggataatgcatt-tgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtga 476  Q
    ||||||||||||||| ||||||||| ||  ||||||||||  ||| | |||||||||  ||||||||||   |||||||||||||||| |||||| ||||    
T  4395953 gtccccatgagcttaactcatttggcaaatgataatgcataatgtgtgcaggggccggagttcgaacccctgacaccccatttattcatctttaaggtga 4395854  T
Q  477 atttct 482  Q
    ||||||    
T  4395853 atttct 4395848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 375 - 500
Target Start/End: Original strand, 3294073 - 3294199
Alignment:
Q  375 attgtccccatgagcttagctcatttggtaagggataatgcatt-tgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatg 473  Q
    ||||||||| |||||||| || | ||| |||||||||||||||  | ||| ||||||||| ||||||||  |   ||| |||||||||||| |||||| |    
T  3294073 attgtccccgtgagcttaacttacttgttaagggataatgcataatttatgcaggggccggggttcgaattccggacaacccatttattcatctttaagg 3294172  T
Q  474 tgaatttctttaaccgctagactactt 500  Q
    ||||||||| ||  |||||||||||||    
T  3294173 tgaatttctatagtcgctagactactt 3294199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 377 - 500
Target Start/End: Complemental strand, 15470724 - 15470600
Alignment:
Q  377 tgtccccatgagcttagctcatttggtaagggataatgcatt-tgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtg 475  Q
    |||||| |||||||||  ||||||||||||||||||||||   | | | || |||| | | ||||||||| | |||||||||||||||| |||||| |||    
T  15470724 tgtccctatgagcttaattcatttggtaagggataatgcacaatatgtgcaagggctgagattcgaaccccagacaccccatttattcatctttaaggtg 15470625  T
Q  476 aatttctttaaccgctagactactt 500  Q
    ||||||| || || ||| |||||||    
T  15470624 aatttctctagccactaaactactt 15470600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 449 - 500
Target Start/End: Complemental strand, 15680931 - 15680880
Alignment:
Q  449 acaccccatttattcacctttaatgtgaatttctttaaccgctagactactt 500  Q
    |||||||| |||||||||||||| |||||||||| |||||||||| ||||||    
T  15680931 acaccccacttattcacctttaaggtgaatttctctaaccgctaggctactt 15680880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 378 - 416
Target Start/End: Complemental strand, 12375514 - 12375476
Alignment:
Q  378 gtccccatgagcttagctcatttggtaagggataatgca 416  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  12375514 gtccccatgagcttagctcatttggtaatggataatgca 12375476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 375 - 416
Target Start/End: Original strand, 87781 - 87822
Alignment:
Q  375 attgtccccatgagcttagctcatttggtaagggataatgca 416  Q
    |||||||||||||||| | |||||||||||||||||||||||    
T  87781 attgtccccatgagctcaactcatttggtaagggataatgca 87822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 378 - 442
Target Start/End: Complemental strand, 31991863 - 31991798
Alignment:
Q  378 gtccccatgagcttagctcatttggtaagggataatgcatt-tgtatccaggggccgtggttcgaa 442  Q
    |||||| ||||||||||||| |||||||||||||||||||| | ||| |||||| || ||||||||    
T  31991863 gtccccttgagcttagctcacttggtaagggataatgcattatatatgcaggggtcggggttcgaa 31991798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 376 - 416
Target Start/End: Complemental strand, 1984293 - 1984253
Alignment:
Q  376 ttgtccccatgagcttagctcatttggtaagggataatgca 416  Q
    |||||| |||||||||| |||||||||||||||||||||||    
T  1984293 ttgtccacatgagcttaactcatttggtaagggataatgca 1984253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 149 - 205
Target Start/End: Complemental strand, 9572704 - 9572648
Alignment:
Q  149 aaataatctttgacgttaaaatatttgattaatattgtcttatcagttcttcaatat 205  Q
    ||||| |||||||||||||||||||   ||||||||||| ||||||| |||||||||    
T  9572704 aaatagtctttgacgttaaaatattattttaatattgtcgtatcagtccttcaatat 9572648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 384 - 416
Target Start/End: Original strand, 17077360 - 17077392
Alignment:
Q  384 atgagcttagctcatttggtaagggataatgca 416  Q
    |||||||||||||||||||||||||||||||||    
T  17077360 atgagcttagctcatttggtaagggataatgca 17077392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 138 - 257
Target Start/End: Original strand, 26675094 - 26675212
Alignment:
Q  138 tttgttagtcgaaataatctttgacgttaaaatatttgattaatattgtcttatcagttcttcaatatacttacttatcatcttattagtccttatatat 237  Q
    |||||||||| |||||||   | | |||||||||||| |||||||||||| ||| ||| |||||||||||||| ||||  || ||| ||| ||||||  |    
T  26675094 tttgttagtcaaaataattcataatgttaaaatatttcattaatattgtcatat-agtccttcaatatacttatttattgtcatatcagttcttataagt 26675192  T
Q  238 acttacttattgtcacttca 257  Q
    | ||| ||||||||| ||||    
T  26675193 atttatttattgtcatttca 26675212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 138 - 257
Target Start/End: Original strand, 26946702 - 26946820
Alignment:
Q  138 tttgttagtcgaaataatctttgacgttaaaatatttgattaatattgtcttatcagttcttcaatatacttacttatcatcttattagtccttatatat 237  Q
    |||||||||| |||||||   | | |||||||||||| |||||||||||| ||| ||| |||||||||||||| ||||  || ||| ||| ||||||  |    
T  26946702 tttgttagtcaaaataattcataatgttaaaatatttcattaatattgtcatat-agtccttcaatatacttatttattgtcatatcagttcttataagt 26946800  T
Q  238 acttacttattgtcacttca 257  Q
    | ||| ||||||||| ||||    
T  26946801 atttatttattgtcatttca 26946820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 215
Target Start/End: Original strand, 27769886 - 27769937
Alignment:
Q  164 ttaaaatatttgattaatattgtcttatcagttcttcaatatacttacttat 215  Q
    ||||||||||| |||||||||||| ||| |  ||||||||||||||||||||    
T  27769886 ttaaaatattttattaatattgtcatattaactcttcaatatacttacttat 27769937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 377 - 416
Target Start/End: Original strand, 43263205 - 43263244
Alignment:
Q  377 tgtccccatgagcttagctcatttggtaagggataatgca 416  Q
    |||||||||||||||| ||||||||||||| |||||||||    
T  43263205 tgtccccatgagcttaactcatttggtaagagataatgca 43263244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 164 - 210
Target Start/End: Original strand, 296415 - 296461
Alignment:
Q  164 ttaaaatatttgattaatattgtcttatcagttcttcaatatactta 210  Q
    ||||||||||| |||||||||||| ||| || |||||||||||||||    
T  296415 ttaaaatatttcattaatattgtcgtattagatcttcaatatactta 296461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 166 - 252
Target Start/End: Complemental strand, 8206281 - 8206195
Alignment:
Q  166 aaaatatttgattaatattgtcttatcagttcttcaatatacttacttatcatcttattagtccttatatatacttacttattgtca 252  Q
    |||||| || |||||||||||| ||| | | ||||||||||||||||||| ||| ||| | ||||||||  ||| |||| |||||||    
T  8206281 aaaataattcattaatattgtcatattaatccttcaatatacttacttattatcatatgaatccttataagtacctactaattgtca 8206195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 378 - 416
Target Start/End: Original strand, 13576316 - 13576354
Alignment:
Q  378 gtccccatgagcttagctcatttggtaagggataatgca 416  Q
    |||| |||||||||| |||||||||||||||||||||||    
T  13576316 gtcctcatgagcttaactcatttggtaagggataatgca 13576354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 435 - 488
Target Start/End: Original strand, 38435970 - 38436023
Alignment:
Q  435 ggttcgaaccctatacaccccatttattcacctttaatgtgaatttctttaacc 488  Q
    ||||||||||  | |||||| | |||||||||||||| ||||||||||||||||    
T  38435970 ggttcgaaccacagacaccctacttattcacctttaaggtgaatttctttaacc 38436023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 385 - 417
Target Start/End: Complemental strand, 1931872 - 1931840
Alignment:
Q  385 tgagcttagctcatttggtaagggataatgcat 417  Q
    ||||||||||| |||||||||||||||||||||    
T  1931872 tgagcttagcttatttggtaagggataatgcat 1931840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 428 - 468
Target Start/End: Complemental strand, 2058304 - 2058264
Alignment:
Q  428 gggccgtggttcgaaccctatacaccccatttattcacctt 468  Q
    |||||| ||||||||||| ||||||| ||||||||||||||    
T  2058304 gggccgaggttcgaaccccatacacctcatttattcacctt 2058264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 456 - 500
Target Start/End: Complemental strand, 12256519 - 12256475
Alignment:
Q  456 atttattcacctttaatgtgaatttctttaaccgctagactactt 500  Q
    |||||||||||||||| |||||||||| || ||||||| ||||||    
T  12256519 atttattcacctttaaggtgaatttctctagccgctaggctactt 12256475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 381 - 413
Target Start/End: Original strand, 42208913 - 42208945
Alignment:
Q  381 cccatgagcttagctcatttggtaagggataat 413  Q
    |||||||||||||||||||| ||||||||||||    
T  42208913 cccatgagcttagctcatttagtaagggataat 42208945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 51; Significance: 6e-20; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 138 - 252
Target Start/End: Complemental strand, 29462 - 29348
Alignment:
Q  138 tttgttagtcgaaataatctttgacgttaaaatatttgattaatattgtcttatcagttcttcaatatacttacttatcatcttattagtccttatatat 237  Q
    |||||||||| ||||| |||||||  |||| ||||||  ||||||||||| | | |||||||||||| ||||| ||||  || |||||||||||||| ||    
T  29462 tttgttagtcaaaatagtctttgatattaatatatttcgttaatattgtcatgttagttcttcaatagacttagttattttcatattagtccttatacat 29363  T
Q  238 acttacttattgtca 252  Q
    |||||||||||||||    
T  29362 acttacttattgtca 29348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 378 - 500
Target Start/End: Original strand, 419705 - 419828
Alignment:
Q  378 gtccccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtga 476  Q
    ||||||||||||||||||||||||||||||||||||| |   | | | ||||||||| |||||||||||   |||||||| ||||||| |||||| ||||    
T  419705 gtccccatgagcttagctcatttggtaagggataatgaacaatatgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaaggtga 419804  T
Q  477 atttctttaaccgctagactactt 500  Q
    |||||| || || |||| ||||||    
T  419805 atttctctagccactaggctactt 419828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 142 - 252
Target Start/End: Complemental strand, 349208 - 349098
Alignment:
Q  142 ttagtcgaaataatctttgacgttaaaatatttgattaatattgtcttatcagttcttcaatatacttacttatcatcttattagtccttatatatactt 241  Q
    |||||| ||||| |||||||  |||||||||||  ||||||||||| | | |||||||||||| ||||| ||||  || ||||||||||||||  |||||    
T  349208 ttagtcaaaatagtctttgatattaaaatatttcgttaatattgtcatgttagttcttcaatagacttagttattgtcatattagtccttatacgtactt 349109  T
Q  242 acttattgtca 252  Q
    |||||||||||    
T  349108 acttattgtca 349098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 44; Significance: 9e-16; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 164 - 251
Target Start/End: Original strand, 20651 - 20737
Alignment:
Q  164 ttaaaatatttgattaatattgtcttatcagttcttcaatatacttacttatcatcttattagtccttatatatacttacttattgtc 251  Q
    ||||||||||| |||||||||||| ||| ||| |||||||| ||||| ||||  || |||||||||||||| ||||||||||||||||    
T  20651 ttaaaatatttcattaatattgtcatattagtccttcaatagactta-ttattgtcatattagtccttatacatacttacttattgtc 20737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 501
Target Start/End: Original strand, 22462 - 22576
Alignment:
Q  388 gcttagctcatttggtaagggataatgcat-ttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttctttaa 486  Q
    |||||||||| ||||||||||||||| ||| || |||  |||||| | ||||||||||| | ||| |||| |||||||  ||||| |||||||| ||||     
T  22462 gcttagctcacttggtaagggataatacatattatatgtaggggctgaggttcgaaccccagacatcccacttattcatttttaaggtgaatttttttag 22561  T
Q  487 ccgctagactactta 501  Q
     |||||| |||||||    
T  22562 tcgctagtctactta 22576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 378 - 416
Target Start/End: Complemental strand, 121901 - 121863
Alignment:
Q  378 gtccccatgagcttagctcatttggtaagggataatgca 416  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  121901 gtccccatgagcttagctcatttggtaggggataatgca 121863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 401 - 485
Target Start/End: Complemental strand, 15409 - 15325
Alignment:
Q  401 ggtaagggataatgcatttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttcttta 485  Q
    ||||||||||||||||| | ||| |||||| || ||||||||||| | ||| | || | ||||| |||||| |||||||||||||    
T  15409 ggtaagggataatgcatatttatgcaggggtcggggttcgaaccccagacatcgcagtcattcatctttaaggtgaatttcttta 15325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 482
Target Start/End: Original strand, 7069 - 7174
Alignment:
Q  378 gtccccatgagcttagctcatttggtaagggataatgcatt--tgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtg 475  Q
    |||||| ||||| ||||||| ||| || |||| ||||||||  | ||| ||||||||| |||||||||||   ||||||||||||||||| || || |||    
T  7069 gtccccgtgagcatagctcagttgtta-gggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccatttattcactttaaaagtg 7167  T
Q  476 aatttct 482  Q
    |||||||    
T  7168 aatttct 7174  T

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Target: scaffold0687 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0687
Description:

Target: scaffold0687; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 176 - 252
Target Start/End: Original strand, 1705 - 1781
Alignment:
Q  176 attaatattgtcttatcagttcttcaatatacttacttatcatcttattagtccttatatatacttacttattgtca 252  Q
    |||||||||||| ||| | |  ||||||||| ||||||||  || || ||||| ||||||||| |||||||||||||    
T  1705 attaatattgtcatattaatctttcaatatatttacttattgtcatactagtctttatatatatttacttattgtca 1781  T

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