View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16835_high_9 (Length: 251)
Name: NF16835_high_9
Description: NF16835
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16835_high_9 |
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Alignment Details
Target: chr2 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 4372186 - 4372422
Alignment:
| Q |
1 |
ataatgacaagtctctttgttagatctgaaatgtcttgcaaagttatcttctaaggataggtatgatttgatcagcaaaa-tacttgtaaaacaagaaaa |
99 |
Q |
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| T |
4372186 |
ataatgacaattctctttgttagatctgaaacgtcttgcaaggttatcttctaaggataggtatgatttgatcagcaaaaatacttgtaaaacaagaaaa |
4372285 |
T |
|
| Q |
100 |
gttaaaatcgccttaaattaaggatgaatcttttaatttcaacataagtcgaaatggacttttgtacctgaaactaccttgtttcccgaaccaaatactt |
199 |
Q |
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||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4372286 |
gttaaaatccccttaaattaaggatgaatcttttaatttcaacataagtcgaaatggacttttgtacctgaaactaccttgtttcccgaaccaaatactt |
4372385 |
T |
|
| Q |
200 |
atctcggcaaaaaattctgatctaacaaaaagtacag |
236 |
Q |
| |
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|||||||||||||||||||||||| |||||||||||| |
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| T |
4372386 |
atctcggcaaaaaattctgatctaccaaaaagtacag |
4372422 |
T |
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