View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16839_low_7 (Length: 394)

Name: NF16839_low_7
Description: NF16839
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16839_low_7
NF16839_low_7
[»] chr2 (41 HSPs)
chr2 (66-375)||(11084205-11084521)
chr2 (66-358)||(16806031-16806311)
chr2 (66-358)||(16845312-16845592)
chr2 (127-294)||(25713867-25714035)
chr2 (66-269)||(42871899-42872098)
chr2 (65-294)||(20170908-20171131)
chr2 (65-319)||(15507827-15508080)
chr2 (69-243)||(41541619-41541793)
chr2 (66-320)||(25713488-25713737)
chr2 (69-375)||(4316936-4317239)
chr2 (65-346)||(1397832-1398105)
chr2 (69-276)||(44898596-44898803)
chr2 (70-275)||(36243514-36243717)
chr2 (65-246)||(29408325-29408504)
chr2 (65-269)||(4700656-4700863)
chr2 (83-246)||(3309421-3309583)
chr2 (65-243)||(33660575-33660751)
chr2 (70-238)||(157607-157774)
chr2 (65-211)||(12412943-12413090)
chr2 (65-211)||(12425003-12425150)
chr2 (124-213)||(45271892-45271980)
chr2 (65-212)||(4958973-4959120)
chr2 (65-212)||(34424372-34424519)
chr2 (136-246)||(21253025-21253136)
chr2 (69-247)||(13588484-13588659)
chr2 (65-214)||(27746962-27747109)
chr2 (202-358)||(45272930-45273092)
chr2 (101-208)||(7485726-7485833)
chr2 (249-358)||(32113091-32113202)
chr2 (127-207)||(4135777-4135857)
chr2 (15-66)||(11084549-11084600)
chr2 (126-212)||(25965306-25965392)
chr2 (110-211)||(43043236-43043335)
chr2 (299-358)||(3309565-3309625)
chr2 (299-358)||(29408486-29408546)
chr2 (203-269)||(149973-150039)
chr2 (117-223)||(37360751-37360859)
chr2 (183-282)||(1405825-1405923)
chr2 (139-210)||(37814941-37815011)
chr2 (206-294)||(33024653-33024738)
chr2 (66-147)||(33024746-33024825)
[»] chr8 (27 HSPs)
chr8 (92-375)||(14896892-14897172)
chr8 (65-346)||(32234038-32234314)
chr8 (67-358)||(5871171-5871464)
chr8 (65-358)||(38401877-38402160)
chr8 (66-276)||(34039294-34039504)
chr8 (110-352)||(34146613-34146851)
chr8 (65-354)||(27232013-27232299)
chr8 (65-242)||(35970072-35970248)
chr8 (65-233)||(29315231-29315399)
chr8 (127-358)||(11087495-11087727)
chr8 (117-259)||(7694941-7695083)
chr8 (126-358)||(35970380-35970608)
chr8 (65-239)||(3742186-3742360)
chr8 (69-215)||(1256235-1256381)
chr8 (225-358)||(29315414-29315548)
chr8 (65-209)||(36683400-36683542)
chr8 (65-241)||(1530198-1530374)
chr8 (69-212)||(3443318-3443462)
chr8 (225-358)||(36682951-36683080)
chr8 (69-212)||(9455562-9455704)
chr8 (184-269)||(30887514-30887599)
chr8 (65-151)||(13385441-13385527)
chr8 (69-173)||(38459081-38459181)
chr8 (299-360)||(16599072-16599134)
chr8 (135-212)||(2742601-2742682)
chr8 (229-275)||(3742096-3742142)
chr8 (181-210)||(7940421-7940450)
[»] chr7 (45 HSPs)
chr7 (66-354)||(16197192-16197475)
chr7 (69-358)||(4567718-4568004)
chr7 (73-290)||(2798769-2798985)
chr7 (65-269)||(28226737-28226941)
chr7 (65-358)||(27723625-27723904)
chr7 (65-275)||(17270026-17270235)
chr7 (66-246)||(37124624-37124803)
chr7 (65-319)||(41746905-41747158)
chr7 (83-358)||(35792520-35792797)
chr7 (65-272)||(43368968-43369172)
chr7 (77-281)||(39618102-39618304)
chr7 (69-269)||(2271338-2271536)
chr7 (65-236)||(3835246-3835417)
chr7 (110-269)||(41690207-41690366)
chr7 (65-358)||(10534419-10534717)
chr7 (65-247)||(33258861-33259044)
chr7 (115-269)||(2273282-2273433)
chr7 (70-214)||(15643631-15643774)
chr7 (113-267)||(8614563-8614717)
chr7 (65-212)||(14771025-14771172)
chr7 (65-212)||(15221477-15221624)
chr7 (65-212)||(4962546-4962692)
chr7 (139-294)||(39599424-39599582)
chr7 (113-233)||(47541912-47542034)
chr7 (65-210)||(46671628-46671775)
chr7 (110-247)||(10025848-10025985)
chr7 (65-212)||(39434428-39434576)
chr7 (149-353)||(12394563-12394767)
chr7 (65-164)||(12394778-12394877)
chr7 (70-269)||(27228902-27229098)
chr7 (65-212)||(4678859-4679008)
chr7 (65-212)||(39429922-39430072)
chr7 (136-226)||(372403-372492)
chr7 (176-270)||(7808801-7808895)
chr7 (299-358)||(2271552-2271612)
chr7 (65-164)||(1752047-1752146)
chr7 (134-243)||(1719580-1719689)
chr7 (127-265)||(21529146-21529279)
chr7 (132-212)||(24393759-24393838)
chr7 (299-358)||(37124582-37124642)
chr7 (71-169)||(25741605-25741704)
chr7 (147-276)||(14734638-14734767)
chr7 (126-212)||(46094515-46094598)
chr7 (113-210)||(45635209-45635303)
chr7 (65-212)||(25290951-25291098)
[»] chr3 (48 HSPs)
chr3 (65-358)||(45646926-45647218)
chr3 (65-358)||(16236986-16237280)
chr3 (65-358)||(27817766-27818064)
chr3 (67-293)||(296848-297073)
chr3 (70-294)||(9589154-9589380)
chr3 (65-269)||(2599479-2599683)
chr3 (89-276)||(2094182-2094369)
chr3 (65-358)||(21933900-21934209)
chr3 (65-233)||(38750451-38750618)
chr3 (66-269)||(1405302-1405509)
chr3 (135-358)||(45667763-45667990)
chr3 (92-265)||(376138-376310)
chr3 (65-269)||(34669099-34669304)
chr3 (65-346)||(45759055-45759336)
chr3 (83-375)||(6749267-6749548)
chr3 (70-375)||(6472240-6472536)
chr3 (70-226)||(37030369-37030526)
chr3 (65-212)||(7259295-7259443)
chr3 (75-358)||(5493955-5494235)
chr3 (70-253)||(12568817-12568999)
chr3 (70-253)||(13545281-13545463)
chr3 (101-237)||(21916014-21916147)
chr3 (70-230)||(633035-633193)
chr3 (127-241)||(19229316-19229429)
chr3 (69-234)||(27264256-27264419)
chr3 (112-358)||(42735061-42735301)
chr3 (226-358)||(38750634-38750769)
chr3 (101-212)||(13779147-13779257)
chr3 (65-212)||(21959318-21959465)
chr3 (92-270)||(34823619-34823790)
chr3 (142-246)||(19578487-19578588)
chr3 (65-210)||(34824182-34824321)
chr3 (227-356)||(21915864-21915994)
chr3 (142-242)||(1272671-1272772)
chr3 (176-269)||(22722252-22722345)
chr3 (109-211)||(25841504-25841603)
chr3 (132-269)||(388872-389008)
chr3 (177-272)||(39493070-39493165)
chr3 (123-276)||(20140542-20140694)
chr3 (127-243)||(10617896-10618011)
chr3 (249-358)||(37030542-37030649)
chr3 (69-143)||(1273100-1273174)
chr3 (205-281)||(6512106-6512181)
chr3 (308-375)||(6512297-6512365)
chr3 (188-247)||(23272483-23272542)
chr3 (101-142)||(5482038-5482079)
chr3 (127-188)||(45885348-45885408)
chr3 (205-281)||(6512200-6512276)
[»] chr4 (46 HSPs)
chr4 (67-358)||(49299318-49299609)
chr4 (70-358)||(54982157-54982441)
chr4 (65-269)||(9808040-9808241)
chr4 (65-266)||(17330842-17331042)
chr4 (71-358)||(34031469-34031765)
chr4 (65-358)||(19443042-19443323)
chr4 (69-318)||(45666680-45666927)
chr4 (71-247)||(24073335-24073511)
chr4 (65-358)||(38839893-38840184)
chr4 (70-358)||(49263401-49263689)
chr4 (66-343)||(47943957-47944221)
chr4 (69-243)||(50721382-50721555)
chr4 (66-239)||(41503013-41503186)
chr4 (66-358)||(1821068-1821346)
chr4 (83-358)||(53393707-53393978)
chr4 (65-319)||(37209540-37209796)
chr4 (71-253)||(53370054-53370234)
chr4 (65-239)||(33890057-33890229)
chr4 (113-268)||(46250277-46250430)
chr4 (71-210)||(46430403-46430542)
chr4 (65-208)||(9088741-9088884)
chr4 (65-212)||(38433837-38433983)
chr4 (65-225)||(26625584-26625740)
chr4 (69-341)||(38044246-38044516)
chr4 (65-319)||(6949402-6949641)
chr4 (136-258)||(22349374-22349493)
chr4 (65-212)||(37371016-37371166)
chr4 (109-234)||(2685076-2685201)
chr4 (181-358)||(25494129-25494306)
chr4 (65-212)||(24537900-24538045)
chr4 (70-212)||(55344061-55344204)
chr4 (105-267)||(33809356-33809507)
chr4 (113-221)||(46016413-46016520)
chr4 (127-210)||(31104810-31104893)
chr4 (138-276)||(20782857-20782995)
chr4 (200-358)||(9089141-9089300)
chr4 (214-269)||(30912827-30912882)
chr4 (225-358)||(41502877-41503002)
chr4 (299-358)||(50721308-50721368)
chr4 (15-58)||(2905216-2905259)
chr4 (75-144)||(46196526-46196595)
chr4 (299-352)||(2493508-2493562)
chr4 (324-358)||(33889920-33889954)
chr4 (290-358)||(24073751-24073819)
chr4 (83-148)||(25494305-25494370)
chr4 (70-154)||(23674124-23674208)
[»] chr6 (22 HSPs)
chr6 (118-358)||(2437273-2437510)
chr6 (115-354)||(23410868-23411107)
chr6 (70-270)||(14093211-14093410)
chr6 (65-269)||(8049779-8049985)
chr6 (65-239)||(26252004-26252177)
chr6 (65-358)||(25056899-25057189)
chr6 (65-208)||(6026522-6026664)
chr6 (113-286)||(31660855-31661027)
chr6 (69-236)||(31656042-31656209)
chr6 (194-358)||(8049583-8049751)
chr6 (78-278)||(8461114-8461309)
chr6 (109-248)||(6110662-6110801)
chr6 (65-212)||(21526915-21527062)
chr6 (135-351)||(9353493-9353706)
chr6 (69-212)||(7972257-7972400)
chr6 (301-372)||(6110832-6110903)
chr6 (314-358)||(14093406-14093450)
chr6 (132-236)||(31871454-31871557)
chr6 (132-231)||(21013160-21013257)
chr6 (192-236)||(4123131-4123175)
chr6 (125-174)||(34132030-34132079)
chr6 (150-247)||(9103067-9103166)
[»] chr1 (36 HSPs)
chr1 (65-358)||(13254142-13254439)
chr1 (70-319)||(41117359-41117608)
chr1 (65-328)||(6295187-6295452)
chr1 (66-358)||(32769315-32769618)
chr1 (75-293)||(4395534-4395753)
chr1 (65-239)||(52415602-52415777)
chr1 (65-290)||(19270081-19270302)
chr1 (65-269)||(10430080-10430283)
chr1 (69-257)||(11795463-11795650)
chr1 (65-223)||(1394824-1394981)
chr1 (69-269)||(2752079-2752278)
chr1 (150-270)||(45925833-45925953)
chr1 (65-246)||(36319436-36319616)
chr1 (65-293)||(52957615-52957834)
chr1 (88-242)||(23698862-23699016)
chr1 (65-244)||(4671864-4672043)
chr1 (66-233)||(40518582-40518747)
chr1 (65-236)||(39386988-39387159)
chr1 (225-358)||(40518764-40518894)
chr1 (225-354)||(30280935-30281063)
chr1 (70-230)||(30281082-30281240)
chr1 (69-212)||(11237594-11237736)
chr1 (65-212)||(31622773-31622920)
chr1 (127-269)||(21965683-21965825)
chr1 (225-358)||(52415461-52415590)
chr1 (137-287)||(1453955-1454103)
chr1 (116-212)||(43021437-43021531)
chr1 (70-164)||(11817494-11817588)
chr1 (249-358)||(4671737-4671837)
chr1 (135-212)||(23697483-23697559)
chr1 (223-319)||(39157219-39157314)
chr1 (214-269)||(43021319-43021374)
chr1 (127-236)||(36964477-36964585)
chr1 (114-149)||(23699827-23699862)
chr1 (115-212)||(786624-786722)
chr1 (297-358)||(36319596-36319658)
[»] chr5 (35 HSPs)
chr5 (89-352)||(8544148-8544408)
chr5 (67-296)||(17201875-17202104)
chr5 (70-241)||(6428534-6428705)
chr5 (88-358)||(12436154-12436423)
chr5 (70-358)||(19804090-19804380)
chr5 (71-358)||(1583843-1584132)
chr5 (66-233)||(248892-249057)
chr5 (138-358)||(42673539-42673760)
chr5 (66-211)||(1584179-1584324)
chr5 (71-272)||(32474591-32474791)
chr5 (65-294)||(13219800-13220030)
chr5 (101-272)||(17200487-17200658)
chr5 (66-242)||(37270025-37270200)
chr5 (124-267)||(39940175-39940317)
chr5 (112-358)||(11991722-11991966)
chr5 (132-360)||(18412830-18413056)
chr5 (65-246)||(28620492-28620670)
chr5 (72-212)||(36059554-36059693)
chr5 (65-212)||(20202163-20202310)
chr5 (65-164)||(39585348-39585447)
chr5 (75-372)||(19133037-19133337)
chr5 (112-269)||(25612756-25612911)
chr5 (70-214)||(17558295-17558438)
chr5 (135-243)||(14967820-14967928)
chr5 (66-212)||(16366045-16366191)
chr5 (115-234)||(36244539-36244657)
chr5 (70-241)||(11825179-11825352)
chr5 (228-292)||(37269943-37270007)
chr5 (65-164)||(32717599-32717697)
chr5 (225-358)||(249070-249204)
chr5 (147-269)||(17592033-17592154)
chr5 (136-241)||(31126899-31127003)
chr5 (308-358)||(17201814-17201865)
chr5 (297-358)||(28620451-28620512)
chr5 (278-358)||(39585458-39585539)
[»] scaffold0188 (1 HSPs)
scaffold0188 (77-269)||(5604-5797)
[»] scaffold0841 (2 HSPs)
scaffold0841 (127-294)||(4205-4373)
scaffold0841 (110-265)||(3870-4026)
[»] scaffold1327 (1 HSPs)
scaffold1327 (67-346)||(1121-1397)
[»] scaffold0005 (2 HSPs)
scaffold0005 (90-294)||(257183-257386)
scaffold0005 (69-212)||(271855-272004)
[»] scaffold1986 (1 HSPs)
scaffold1986 (89-269)||(565-747)
[»] scaffold1130 (1 HSPs)
scaffold1130 (65-212)||(709-856)
[»] scaffold0097 (1 HSPs)
scaffold0097 (113-212)||(48529-48627)
[»] scaffold0637 (1 HSPs)
scaffold0637 (131-269)||(3774-3910)
[»] scaffold0006 (1 HSPs)
scaffold0006 (66-212)||(45913-46058)
[»] scaffold0018 (1 HSPs)
scaffold0018 (113-184)||(184568-184639)


Alignment Details
Target: chr2 (Bit Score: 246; Significance: 1e-136; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 66 - 375
Target Start/End: Complemental strand, 11084521 - 11084205
Alignment:
Q  66 ttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatat 165  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  11084521 ttcctttttaagtgtcattttggaatattaacatcaaaatagtaaagtgtgtttttatacattttcttcctattataccctcattttaatctaccaatat 11084422  T
Q  166 atttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaaca 265  Q
    |||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  11084421 attcatattattttgcacacactttctctttccaataaatttaatatgttatctttctctcgtaacaaacatttgttaattaatatttttttctccaaca 11084322  T
Q  266 aatttctttttgttttgcacact------ctctcttacgtaacaaatgattgtcaa-tttttaaatattgtgcacatctttttaattaatttaagtcaat 358  Q
    |||| ||||||||||||||||||      ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  11084321 aattcctttttgttttgcacactctctttctctcttacgtaacaaatgattgtcaattttttaaatattgtgcacatctctttaattaatttaagtcaat 11084222  T
Q  359 tttcaatgagtcttcca 375  Q
    |||||||||||||||||    
T  11084221 tttcaatgagtcttcca 11084205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 66 - 358
Target Start/End: Original strand, 16806031 - 16806311
Alignment:
Q  66 ttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatat 165  Q
    |||||||||||||||| |||| ||||||||| | ||||||||| | |||||||||| ||| |||||||||||||||||||| ||||||||||||||||      
T  16806031 ttcctttttaagtgtctttttagaaaattaaaaccaaaatagtgatgtgtatttttgcacgttttcttcctattataccctaattttaatccaccaatga 16806130  T
Q  166 atttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaaca 265  Q
               |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| |||| | ||| |||||||||||| ||||    
T  16806131 -----------tttgcacacactttatctttccaataaatttaatatgttatctttctctcgtaacaaacaattgtcagttattatctttttctctaaca 16806219  T
Q  266 aatttctttttgttttgcacactctctcttacgtaacaaatgattgtcaatttt-taaatattgtgcacatctttttaattaatttaagtcaat 358  Q
    ||||  | ||| || ||| | ||||||||  | |||||||  |||||||||||| ||||||||||| |||||| |||||||| |||||||||||    
T  16806220 aattcatattttttgtgctctctctctct--cataacaaacaattgtcaattttctaaatattgtggacatctatttaattattttaagtcaat 16806311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 66 - 358
Target Start/End: Original strand, 16845312 - 16845592
Alignment:
Q  66 ttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatat 165  Q
    |||||||||||||||| |||| ||||||||| | ||||||||| | |||||||||| ||| |||||||||||||||||||| ||||||||||||||||      
T  16845312 ttcctttttaagtgtctttttagaaaattaaaaccaaaatagtgatgtgtatttttgcacgttttcttcctattataccctaattttaatccaccaatga 16845411  T
Q  166 atttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaaca 265  Q
               |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| |||| | ||| |||||||||||| ||||    
T  16845412 -----------tttgcacacactttatctttccaataaatttaatatgttatctttctctcgtaacaaacaattgtcagttattatctttttctctaaca 16845500  T
Q  266 aatttctttttgttttgcacactctctcttacgtaacaaatgattgtcaatttt-taaatattgtgcacatctttttaattaatttaagtcaat 358  Q
    ||||  | ||| || ||| | ||||||||  | |||||||  |||||||||||| ||||||||||| |||||| |||||||| |||||||||||    
T  16845501 aattcatattttttgtgctctctctctct--cataacaaacaattgtcaattttctaaatattgtggacatctatttaattattttaagtcaat 16845592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 127 - 294
Target Start/End: Original strand, 25713867 - 25714035
Alignment:
Q  127 ttttcttcctattataccctcattttaatccaccaatatatttctattatttt-gcacacactttctctttccaataaatttaatattttatctttctct 225  Q
    |||||||||||||||||||||||||||||||||||||||||| || || |||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  25713867 ttttcttcctattataccctcattttaatccaccaatatattccttttttttttgcacacactttctctttccaataaatttaatatgttatctttctct 25713966  T
Q  226 cgtaacaaacatttgttaattaatatctttttctccaacaaatttctttttgttttgcacactctctct 294  Q
    |||||||||||||||||| | | | | ||||||||||||||||| |||||| |||||||| ||||||||    
T  25713967 cgtaacaaacatttgttagtcagtgtgtttttctccaacaaattccttttttttttgcacgctctctct 25714035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 66 - 269
Target Start/End: Original strand, 42871899 - 42872098
Alignment:
Q  66 ttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatat 165  Q
    |||||||||||||||| |||| ||| | ||||||||||||||  |||||||||||| || ||||||||||||| ||||||||||||||||||||||||||    
T  42871899 ttcctttttaagtgtcgttttagaatactaacatcaaaatagcgaagtgtatttttgcatattttcttcctatcataccctcattttaatccaccaatat 42871998  T
Q  166 atttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaaca 265  Q
    ||| |||||||||||  |||||||||||  || |||||||||||||| |||| ||||||||||||||||||||||||| ||| ||| ||||||| |||||    
T  42871999 attcctattattttg--cacactttctcactctaataaatttaatatgttat-tttctctcgtaacaaacatttgttagttactat-tttttcttcaaca 42872094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 65 - 294
Target Start/End: Original strand, 20170908 - 20171131
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaata 164  Q
    |||||| |||||||||| |||| ||| ||||||||  ||||||  |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  20170908 gttcctctttaagtgtcgttttagaatattaacattgaaatagcgaagtgtatttttgcacattttcttcctattataccctcattttaatccaccaata 20171007  T
Q  165 tatttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaac 264  Q
    |||| ||||| ||||| |||||||||   |||   |||| ||| || | |||||||||||||||||||||||| | ||| ||| ||||||||||||||||    
T  20171008 tattcctatttttttgtacacacttt---ttt---ataattttcatttgttatctttctctcgtaacaaacatgtattagttactatctttttctccaac 20171101  T
Q  265 aaatttctttttgttttgcacactctctct 294  Q
    ||||| ||| || ||||||| |||||||||    
T  20171102 aaattccttatttttttgcatactctctct 20171131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 65 - 319
Target Start/End: Complemental strand, 15508080 - 15507827
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaata 164  Q
    ||||||||||||||||| |||| | | ||||||  ||||||||  || ||||||||| | || ||||||||||||||||| |||||||||||||||||||    
T  15508080 gttcctttttaagtgtcgttttagtatattaacgccaaaatagcgaattgtatttttgctcactttcttcctattataccttcattttaatccaccaata 15507981  T
Q  165 ta-tttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaa 263  Q
    || |||||||| ||||||| |||||| || ||||| || |||||||||| |||||||||| || |||||||||||||||| ||| ||| |||||||||||    
T  15507980 tattttctatttttttgcatacacttcctttttcc-attaatttaatatgttatctttctgtcttaacaaacatttgttagttactatgtttttctccaa 15507882  T
Q  264 caaatttctttttgttttgcacactctctcttacgtaacaaatgattgtcaatttt 319  Q
    | || ||||| || |||||||||||||||||  | |||||||  ||||||||||||    
T  15507881 ctaa-ttcttatttttttgcacactctctctctcataacaaacaattgtcaatttt 15507827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 69 - 243
Target Start/End: Complemental strand, 41541793 - 41541619
Alignment:
Q  69 ctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatatatt 168  Q
    |||||||| |||  |||| ||| ||||||| |||||||  |||||||| |||| || ||||||||||||||||||||| |||||||||||||||||||||    
T  41541793 ctttttaattgttgttttagaatattaacaccaaaataacaaagtgtacttttgcatattttcttcctattatacccttattttaatccaccaatatatt 41541694  T
Q  169 tctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgtta 243  Q
      |||| |||| |||||||||||||||||||||||||||||||| |||| ||||||  |||||||||||||||||    
T  41541693 cttattctttttcacacactttctctttccaataaatttaatatgttatttttctcctgtaacaaacatttgtta 41541619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 66 - 320
Target Start/End: Original strand, 25713488 - 25713737
Alignment:
Q  66 ttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatat 165  Q
    ||||||||||| |||| ||||  || |||||||  ||||||   |||||||||||| ||  |||||||||||||||||||||||||||||| | ||||||    
T  25713488 ttcctttttaaatgtcgttttaaaatattaacactaaaataacgaagtgtattttttcagtttttcttcctattataccctcattttaatctaacaatat 25713587  T
Q  166 atttctatta-ttttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaac 264  Q
    ||| || ||| ||||| |||||||||||||||||||||| ||||| || |||| |||||| | |||||||||||||||| ||| | | ||||||||||||    
T  25713588 attccttttatttttgaacacactttctctttccaataattttaacatgttatttttctcacataacaaacatttgttagttattgtgtttttctccaac 25713687  T
Q  265 aaatttctttttgttttgcacactctctcttacgtaacaaatgattgtcaattttt 320  Q
    |      ||||| |||||||| ||||||||  | |||||||| |||||||||||||    
T  25713688 a------ttttttttttgcacgctctctctctcctaacaaataattgtcaattttt 25713737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 69 - 375
Target Start/End: Complemental strand, 4317239 - 4316936
Alignment:
Q  69 ctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaata---t 165  Q
    |||||||||||||||||||||  |||| ||||||| |||  ||||||||||||  |||||||||| |||||||| ||| |||||||||||||||||   |    
T  4317239 ctttttaagtgtcattttggactattagcatcaaattagcgaagtgtatttttctacattttctttctattatatccttattttaatccaccaataaatt 4317140  T
Q  166 atttctattattttgcacacactttctctttccaataaatttaata-ttttatctttctctcgtaacaaacatttgttaattaatatctttttctccaac 264  Q
     ||| | || ||| |||||  |||||| ||| | ||||||||||||  |||||||||||||| ||||||||| |||||||||| ||||| |||||| |||    
T  4317139 cttttttttttttcgcacaagctttcttttttccataaatttaatacatttatctttctctcataacaaacaattgttaattactatctctttctcaaac 4317040  T
Q  265 aaatttctttttgttttgcacactctctcttacgtaacaaatgattgtcaatttt-taaatattgtgcacatctttttaattaatttaagtcaattttca 363  Q
    ||||  |    | |||| || |||||||    | |||||||  |||||||||||| |||||| ||||||||| |||||||||| ||||||||||||  ||    
T  4317039 aaatacc----tatttttcatactctct----cataacaaacaattgtcaattttctaaatagtgtgcacatttttttaattattttaagtcaattacca 4316948  T
Q  364 atgagtcttcca 375  Q
    ||||||||||||    
T  4316947 atgagtcttcca 4316936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 65 - 346
Target Start/End: Complemental strand, 1398105 - 1397832
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaata 164  Q
    |||| ||| |||||||  |||| ||||||||||| ||||||||  | |||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  1398105 gttcatttgtaagtgtttttttagaaaattaacaccaaaatagcgatgtgtatttttgcacattttcttccaattataccctcattttaatccaccaata 1398006  T
Q  165 tatttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaac 264  Q
     ||| |||     |  |||||||||| ||||||||||||||||||||| |||| |||||| |||||||||        ||||| ||||||||||||||||    
T  1398005 aattccta-----tctcacacactttatctttccaataaatttaatatgttatgtttctcccgtaacaaa-------aaattattatctttttctccaac 1397918  T
Q  265 aaa-----tttctttttgttttgcacactctctcttacgtaacaaatgattgtcaa-tttttaaatattgtgcacatctttttaatta 346  Q
    |||     ||| ||||| |||||| | ||| ||||  | |||||||  |||||||| |||||||||||||||||||||||||||||||    
T  1397917 aaattgctttttttttttttttgcgctctcgctct--cataacaaacaattgtcaactttttaaatattgtgcacatctttttaatta 1397832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 69 - 276
Target Start/End: Complemental strand, 44898803 - 44898596
Alignment:
Q  69 ctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatatatt 168  Q
    ||||| ||||||  |||||||| |||| || |||| |||  |||||||||| |||||||||| || |||||||||||||||||||||||||||||| |||    
T  44898803 cttttgaagtgtggttttggaatattagcaccaaattagcgaagtgtatttctacacattttatttctattataccctcattttaatccaccaataaatt 44898704  T
Q  169 tctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaacaaat 268  Q
      |||| |||| |  |||||||| ||||  |||||||||||||| |||| |||||||||||||||||| |||||| ||| | ||| |||||||| |||||    
T  44898703 cttattttttttcttacactttccctttttaataaatttaatatattatttttctctcgtaacaaacaattgttagttactttctctttctccaccaaat 44898604  T
Q  269 ttcttttt 276  Q
    | ||||||    
T  44898603 tccttttt 44898596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 70 - 275
Target Start/End: Original strand, 36243514 - 36243717
Alignment:
Q  70 tttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatatattt 169  Q
    ||||||||||| ||||| |||  ||||||  ||||||   || ||||||||| ||  |||| ||||||||||||||||||||||||| |||||| ||||     
T  36243514 tttttaagtgtaattttagaattttaacactaaaataacgaaatgtattttt-cattttttattcctattataccctcattttaatcaaccaatgtattc 36243612  T
Q  170 ctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaacaaatt 269  Q
    ||||| ||||||| ||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||  |   |||||||||||||||||| ||    
T  36243613 ctatt-ttttgcatacactttctctttccaataaatttaatatgttatctttctttcataacaaacatttgttggtagctatctttttctccaacaattt 36243711  T
Q  270 tctttt 275  Q
    | ||||    
T  36243712 tttttt 36243717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 65 - 246
Target Start/End: Original strand, 29408325 - 29408504
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaata 164  Q
    |||||||||||| |||  |||| ||||||||||| |||||||   | |||||||||| ||||||||||| |||||||||||||||||||||||||||| |    
T  29408325 gttcctttttaaatgtttttttagaaaattaacaccaaaataacgatgtgtatttttgcacattttctttctattataccctcattttaatccaccaaca 29408424  T
Q  165 tatttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaatt 246  Q
     |||  |||  |||| || ||||||| ||||| ||||||||||||||| ||||||||||||| ||||||||| |||| ||||    
T  29408425 aattcttat--tttttcatacactttatcttttcaataaatttaatatgttatctttctctcataacaaacaattgtcaatt 29408504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 65 - 269
Target Start/End: Original strand, 4700656 - 4700863
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattata----ccctcattttaatccacc 160  Q
    |||| ||||||| |||| ||||| || |||||||||||| ||   |||||||||||| ||| ||| ||||| |||| |    || | |||||||||||||    
T  4700656 gttcttttttaactgtcgttttgaaatattaacatcaaattaacgaagtgtatttttgcacctttacttccaattacatagaccgttattttaatccacc 4700755  T
Q  161 aatatatttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctc 260  Q
    ||||||||  |||| |||| |||||||||||||||| |||||| |||||||| |||||||||| |||||||||| | |||||| ||| ||||||||||||    
T  4700756 aatatattcatatttttttacacacactttctctttacaataa-tttaatatgttatctttctttcgtaacaaataattgttagttagtatctttttctc 4700854  T
Q  261 caacaaatt 269  Q
    |||||||||    
T  4700855 caacaaatt 4700863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 83 - 246
Target Start/End: Original strand, 3309421 - 3309583
Alignment:
Q  83 ttttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatatatttctattattttgca 182  Q
    |||| ||||||||||||||||| |   | |||||||||| ||||||||||||||||||||||||||||||||| || ||||| ||| ||| | |||||||    
T  3309421 ttttagaaaattaacatcaaaacaacgatgtgtatttttgcacattttcttcctattataccctcattttaattcatcaataaattcctact-ttttgca 3309519  T
Q  183 cacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaatt 246  Q
    |||| ||| | ||| |||| |||||||||| ||||||||||||| ||||||||| |||| ||||    
T  3309520 cacattttatattttcaatcaatttaatatgttatctttctctcttaacaaacaattgtcaatt 3309583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 65 - 243
Target Start/End: Complemental strand, 33660751 - 33660575
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaata 164  Q
    ||||||||||||||||| |||| ||| ||||| |  ||||||| ||||||||||||| ||| |||||||  |||||||| ||||||||||| ||||   |    
T  33660751 gttcctttttaagtgtcgttttagaatattaatacaaaaatagcaaagtgtatttttgcaccttttctttgtattatactctcattttaattcacc--ca 33660654  T
Q  165 tatttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgtta 243  Q
    | || ||||| |||||||||  ||||||||||| |||||||||||||| |||| |||||||| || |||||||||||||    
T  33660653 tgttcctatttttttgcacaggctttctctttctaataaatttaatatattatatttctctcatagcaaacatttgtta 33660575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 70 - 238
Target Start/End: Original strand, 157607 - 157774
Alignment:
Q  70 tttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatatattt 169  Q
    ||||||||| ||  ||| ||| |||||| | ||| ||| ||||| |||||||||||||||||||||||||||| ||||||||||||||| ||  |  |||    
T  157607 tttttaagtctcgctttagaatattaacgttaaattagcaaagtatatttttacacattttcttcctattatatcctcattttaatccatcagcaatttt 157706  T
Q  170 ctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatt 238  Q
     |||| ||||||||||||||||  |||| |||||||||||||| |||||||||| | ||||||||||||    
T  157707 ttatt-ttttgcacacactttccatttctaataaatttaatatgttatctttcttttgtaacaaacatt 157774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 65 - 211
Target Start/End: Complemental strand, 12413090 - 12412943
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaata 164  Q
    ||||||||||||||||| |||| |||  ||||||  |||| ||  |||||||||||| |||| ||| |||||||||||||||||||||||||||  ||||    
T  12413090 gttcctttttaagtgtcgttttagaattttaacacaaaaaaagcgaagtgtatttttgcacacttttttcctattataccctcattttaatccattaata 12412991  T
Q  165 tatttct-attattttgcacacactttctctttccaataaatttaata 211  Q
      ||||| ||| ||||||||||||||| ||||||||||||||||||||    
T  12412990 gttttctaatttttttgcacacactttatctttccaataaatttaata 12412943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 65 - 211
Target Start/End: Complemental strand, 12425150 - 12425003
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaata 164  Q
    ||||||||||||||||| |||| |||  ||||||  |||| ||  |||||||||||| |||| ||| |||||||||||||||||||||||||||  ||||    
T  12425150 gttcctttttaagtgtcgttttagaattttaacacaaaaaaagcgaagtgtatttttgcacacttttttcctattataccctcattttaatccattaata 12425051  T
Q  165 tatttct-attattttgcacacactttctctttccaataaatttaata 211  Q
      ||||| ||| ||||||||||||||| ||||||||||||||||||||    
T  12425050 gttttctaatttttttgcacacactttatctttccaataaatttaata 12425003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 124 - 213
Target Start/End: Original strand, 45271892 - 45271980
Alignment:
Q  124 acattttcttcctattataccctcattttaatccaccaatatatttctattattttgcacacactttctctttccaataaatttaatatt 213  Q
    |||||||||||||||||||||||||||||||||||||| || |||| |||| ||||||||||||||| ||||||||||||||||||||||    
T  45271892 acattttcttcctattataccctcattttaatccaccattacatttttatt-ttttgcacacactttatctttccaataaatttaatatt 45271980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 65 - 212
Target Start/End: Original strand, 4958973 - 4959120
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaata 164  Q
    ||||||||||||||||  |||| ||   ||||||  ||||||| ||||||||| ||| |||| ||| |||||||||||||||||||||||||||| ||||    
T  4958973 gttcctttttaagtgttgttttagagttttaacactaaaatagcaaagtgtatctttgcacacttttttcctattataccctcattttaatccactaata 4959072  T
Q  165 tatttctattattttgcacacactttctctttccaataaatttaatat 212  Q
      || || || ||||||||||||||| |||||||| ||||||||||||    
T  4959073 atttcctttttttttgcacacactttatctttccattaaatttaatat 4959120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 65 - 212
Target Start/End: Original strand, 34424372 - 34424519
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaata 164  Q
    ||||||||||||||||| ||||  ||  ||||||  |||||||  ||||||||||||||||| ||| || |||||||||||| ||||||||||||  |||    
T  34424372 gttcctttttaagtgtcgttttaaaattttaacacaaaaatagcgaagtgtatttttacacactttttttctattatacccttattttaatccactgata 34424471  T
Q  165 tatttctattattttgcacacactttctctttccaataaatttaatat 212  Q
      || |||||  |||||||||||||| |||||||||||||||||||||    
T  34424472 atttcctatttctttgcacacactttatctttccaataaatttaatat 34424519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 136 - 246
Target Start/End: Complemental strand, 21253136 - 21253025
Alignment:
Q  136 tattataccctcattttaatccaccaatatat-ttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaa 234  Q
    ||||||||| ||||||||||||||||||| || || | || ||||||||||||||| ||||| ||||||||||||||| |||| ||||||| ||||||||    
T  21253136 tattataccttcattttaatccaccaataaatattttttttttttgcacacactttatcttttcaataaatttaatatgttatttttctctagtaacaaa 21253037  T
Q  235 catttgttaatt 246  Q
    || |||||||||    
T  21253036 caattgttaatt 21253025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 69 - 247
Target Start/End: Complemental strand, 13588659 - 13588484
Alignment:
Q  69 ctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatatatt 168  Q
    ||||||||||||| |||| ||||| |||||||||| ||  |||||| ||||||  || |||| |  ||||||||||||| ||| |||||||||||| |||    
T  13588659 ctttttaagtgtcgttttagaaaagtaacatcaaattaagaaagtggatttttgtacctttttt--ctattataccctcgttt-aatccaccaataaatt 13588563  T
Q  169 tctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaatta 247  Q
    | |||| ||||||| | | |||||||||| |||||||||||| | |||| || ||||| ||||||||| ||||| ||||    
T  13588562 tttatttttttgcataaaatttctctttcaaataaatttaatgtgttattttcctctcataacaaacaattgtttatta 13588484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 65 - 214
Target Start/End: Complemental strand, 27747109 - 27746962
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaata 164  Q
    ||||||||||||||||| |||| |||  |||| |  |||||||  |||  ||||||| ||| |||| |  ||||||||||||||||||||||||| ||||    
T  27747109 gttcctttttaagtgtcgttttagaattttaaaacaaaaatagctaagcatatttttgcacttttttt--ctattataccctcattttaatccactaata 27747012  T
Q  165 tatttctattattttgcacacactttctctttccaataaatttaatattt 214  Q
      || ||||| ||||||||||||||| | |||||||||||||||||||||    
T  27747011 atttcctatttttttgcacacactttatttttccaataaatttaatattt 27746962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 202 - 358
Target Start/End: Original strand, 45272930 - 45273092
Alignment:
Q  202 aaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaacaaatttctttttgttttgcacactctctcttac---- 297  Q
    ||||||||||| |||| ||||||||||||||| || |||| | ||| |||||||||||||| |||||| || ||| |||||||| ||||||||  |        
T  45272930 aaatttaatatgttatatttctctcgtaacaagcaattgtcagttattatctttttctccatcaaattcctattt-ttttgcacgctctctctccctatc 45273028  T
Q  298 --gtaacaaatgattgtcaatttt-taaatattgtgcacatctttttaattaatttaagtcaat 358  Q
       |||||||  |||||||||||| ||||||||||||||||||||| ||||| |||||||||||    
T  45273029 ttataacaaacaattgtcaattttctaaatattgtgcacatcttttaaattattttaagtcaat 45273092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 101 - 208
Target Start/End: Original strand, 7485726 - 7485833
Alignment:
Q  101 aaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatatatttctattattttgcacacactttctctttccaa 200  Q
    ||||||| ||| |||||||||| ||||||| |||||||||||| |||||||||||| || ||||  || ||||| ||||||| ||||||| ||||| |||    
T  7485726 aaaatagcaaaatgtatttttagacatttttttcctattatactctcattttaatctactaataatttcctatttttttgcatacactttatctttgcaa 7485825  T
Q  201 taaattta 208  Q
    ||||||||    
T  7485826 taaattta 7485833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 249 - 358
Target Start/End: Original strand, 32113091 - 32113202
Alignment:
Q  249 tatctttttctccaacaaatttctt-tttgttttgcacactctctcttacgtaacaaatgattgtcaatttttaa-atattgtgcacatctttttaatta 346  Q
    ||||||||||||||||||||| |   ||| |||||||||| ||||||  | |||||||  ||||||||||||| | ||||||||||||||| |||| |||    
T  32113091 tatctttttctccaacaaattccacattttttttgcacacactctctctcataacaaacaattgtcaattttttagatattgtgcacatctctttattta 32113190  T
Q  347 atttaagtcaat 358  Q
    ||||||||||||    
T  32113191 atttaagtcaat 32113202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 127 - 207
Target Start/End: Complemental strand, 4135857 - 4135777
Alignment:
Q  127 ttttcttcctattataccctcattttaatccaccaatatatttctattattttgcacacactttctctttccaataaattt 207  Q
    |||||| |||||||||||||| |||||||||||||||| |||  |||| |||||  |||||  ||||||||||||||||||    
T  4135857 ttttctccctattataccctcgttttaatccaccaatagattcatatttttttgtgcacaccctctctttccaataaattt 4135777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 66
Target Start/End: Complemental strand, 11084600 - 11084549
Alignment:
Q  15 cacagacacagaaaaattgcaatcaacaagaattaaaattatgacaaagagt 66  Q
    |||| |||||||||||| ||||||||||||||||||| ||||||||||||||    
T  11084600 cacaaacacagaaaaatcgcaatcaacaagaattaaatttatgacaaagagt 11084549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 126 - 212
Target Start/End: Original strand, 25965306 - 25965392
Alignment:
Q  126 attttcttcctattataccctcattttaatccaccaatatatttc--tattattttgcacacactttctctttccaataaatttaatat 212  Q
    ||||| |||||||||||||||||||| ||||||| ||| ||||||  | || |||| |||||||||| |||||||||||||||||||||    
T  25965306 atttttttcctattataccctcattt-aatccactaat-tatttccttttttttttacacacactttatctttccaataaatttaatat 25965392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 110 - 211
Target Start/End: Complemental strand, 43043335 - 43043236
Alignment:
Q  110 aagtgtatttttacacattttcttcctattataccctcattttaatccaccaatatatttctattattttgcacacactttctctttccaataaatttaa 209  Q
    |||||||||||| |||||||  || ||||||||| || |||| |||||| | ||||||| ||||| ||||||||||  |||||| |||||||||||||||    
T  43043335 aagtgtatttttgcacatttattttctattatactcttatttcaatccatcgatatattcctatt-ttttgcacacgttttctc-ttccaataaatttaa 43043238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 299 - 358
Target Start/End: Original strand, 3309565 - 3309625
Alignment:
Q  299 taacaaatgattgtcaatttt-taaatattgtgcacatctttttaattaatttaagtcaat 358  Q
    |||||||  |||||||||||| |||||||||||||||||||||| |||| |||||||||||    
T  3309565 taacaaacaattgtcaattttctaaatattgtgcacatctttttgattattttaagtcaat 3309625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 299 - 358
Target Start/End: Original strand, 29408486 - 29408546
Alignment:
Q  299 taacaaatgattgtcaatttt-taaatattgtgcacatctttttaattaatttaagtcaat 358  Q
    |||||||  |||||||||||| ||||||||||||||||||||||||||| | |||||||||    
T  29408486 taacaaacaattgtcaattttataaatattgtgcacatctttttaattactgtaagtcaat 29408546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 269
Target Start/End: Original strand, 149973 - 150039
Alignment:
Q  203 aatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaacaaatt 269  Q
    ||||||||||  || |||||||| |||||||||| |||||| ||| |||||||| ||||||||||||    
T  149973 aatttaatatgctagctttctcttgtaacaaacaattgttagttattatcttttactccaacaaatt 150039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 117 - 223
Target Start/End: Complemental strand, 37360859 - 37360751
Alignment:
Q  117 tttttacacattttcttcctattataccctcattttaatccaccaatatatttctattattttgcacacactt--tctctttccaataaatttaatattt 214  Q
    |||||||||||||| || ||||||||||||| | |||||  | ||||| ||| ||||| ||||||| ||| ||  ||||| | ||||||||||||||  |    
T  37360859 tttttacacattttatttctattataccctcgtgttaatgaaacaataaattcctatttttttgcaaacattttctctctattcaataaatttaataggt 37360760  T
Q  215 tatctttct 223  Q
    |||||||||    
T  37360759 tatctttct 37360751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 183 - 282
Target Start/End: Original strand, 1405825 - 1405923
Alignment:
Q  183 cacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaacaaatttctttttgttttg 282  Q
    |||||||||||| | ||||||||||||| | |||| ||| |||| ||| |||||||||||| ||| | ||  | |||||||||||||  |||||||||||    
T  1405825 cacactttctctgttcaataaatttaatgtgttat-tttttctcataagaaacatttgttagttactctccctctctccaacaaattcatttttgttttg 1405923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 210
Target Start/End: Complemental strand, 37815011 - 37814941
Alignment:
Q  139 tataccctcattttaatccaccaatatatttctattattttgcacacactttctctttccaataaatttaat 210  Q
    ||||||| ||||||||||||| |||| | || | || |||||||||||||||||||||| ||| ||||||||    
T  37815011 tatacccccattttaatccacaaataaaattatttt-ttttgcacacactttctctttcgaatcaatttaat 37814941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 294
Target Start/End: Complemental strand, 33024738 - 33024653
Alignment:
Q  206 ttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaacaaatttctttttgttttgcacactctctct 294  Q
    ||||||| |||||||| | ||||||||||||||| ||   || |||||||||||||||||||||  ||||| |||  ||||| ||||||    
T  33024738 ttaatatgttatctttttatcgtaacaaacatttatt---tactatctttttctccaacaaattcatttttttttcacacacactctct 33024653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 147
Target Start/End: Complemental strand, 33024825 - 33024746
Alignment:
Q  66 ttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctc 147  Q
    ||||||||||||| ||||||| |||| ||| || |||||||| |||||||| |||| || |||| |||||||||||| ||||    
T  33024825 ttcctttttaagtatcattttagaaattta-caccaaaatagcaaagtgta-ttttgcatatttacttcctattatatcctc 33024746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 147; Significance: 2e-77; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 92 - 375
Target Start/End: Complemental strand, 14897172 - 14896892
Alignment:
Q  92 attaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatatatttctattattttgcacacactttc 191  Q
    ||||||||||||| ||  |||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||  |||| | |||||||| |||||    
T  14897172 attaacatcaaaagagcgaagtgtatttttgcacattttctttctattatgccctcattttaatccaccaatatattcttattttcttgcacacgctttc 14897073  T
Q  192 tctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaacaaatttctttttgttttgcacactctc 291  Q
    ||||| ||||||||||||||| |||| ||||||||||||||||||||||||| ||  ||||||||||||||| ||||| |||||  ||||||||||| ||    
T  14897072 tcttttcaataaatttaatatgttatatttctctcgtaacaaacatttgttagttcctatctttttctccaaaaaattcctttt--ttttgcacactttc 14896975  T
Q  292 tcttacgtaacaaatgattgtcaatttt-taaatattgtgcacatctttttaattaatttaagtcaattttcaatgagtcttcca 375  Q
    |||  | |||||||  |||||||||||| |||||||||| ||||||| || ||||||||||||||||||| ||||||||||||||    
T  14896974 tct--cataacaaacaattgtcaattttctaaatattgtacacatctcttcaattaatttaagtcaatttccaatgagtcttcca 14896892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 65 - 346
Target Start/End: Complemental strand, 32234314 - 32234038
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaata 164  Q
    ||||||||||||||||  |||| ||||||| ||||||||||||  | ||||||||||  |||||||||||||||||||||||||||| ||||||||||||    
T  32234314 gttcctttttaagtgtttttttagaaaatttacatcaaaatagcgatgtgtatttttgtacattttcttcctattataccctcatttcaatccaccaata 32234215  T
Q  165 tatttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaac 264  Q
     ||| ||||| |||||  |||||||| | |||  |||||||||||||| |||| |||||||||||||||||| |||||| ||  |||||||||||| |||    
T  32234214 aattcctatttttttg--cacactttatttttttaataaatttaatatgttatttttctctcgtaacaaacaattgttagtttttatctttttctctaac 32234117  T
Q  265 aaatttctttttgttttgcacactctctcttacgtaacaaatgattgtcaatttt-taaatattgtgcacatctttttaatta 346  Q
    |||||||| ||  |||||| || |||||||||  |||||||  |||||||||||| |||||||||||||||||||||||||||    
T  32234116 aaatttctatt--ttttgcgcattctctctta--taacaaacaattgtcaattttctaaatattgtgcacatctttttaatta 32234038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 67 - 358
Target Start/End: Complemental strand, 5871464 - 5871171
Alignment:
Q  67 tcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatata 166  Q
    ||||||||||||||| ||||  |||||||| |||||| |||  | || |||||||||||||||||||||||||||||| ||||||||||||||||||| |    
T  5871464 tcctttttaagtgtctttttaaaaaattaatatcaaattagcgatgtatatttttacacattttcttcctattataccttcattttaatccaccaataaa 5871365  T
Q  167 tttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaacaa 266  Q
    || ||||| ||| ||||||| ||| | |||||||| |||||||||| |||| ||||||| |||||||||| |||| ||||| ||| ||||||||||||||    
T  5871364 ttcctattttttcgcacacattttatttttccaatgaatttaatatgttatttttctcttgtaacaaacaattgtcaattattatttttttctccaacaa 5871265  T
Q  267 atttctttttgttttgcacact--ctctcttacgtaacaaatgattgtcaatttt-taaatattgtgcacatctttttaattaatttaagtcaat 358  Q
    ||| |  ||| |||||  ||||  ||||||  | ||  |||  |||||||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  5871264 attccaattt-ttttgttcactagctctctctcatatgaaacaattgtcaattttctaaatattgtgcacatctttttaattattttaaggcaat 5871171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 65 - 358
Target Start/End: Complemental strand, 38402160 - 38401877
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaata 164  Q
    ||||||||||||||||| |||| |||| ||||||||||||||| || |||||||||| ||||||| ||| |||||||||||||||||||||||||| |||    
T  38402160 gttcctttttaagtgtctttttagaaa-ttaacatcaaaatagcaatgtgtatttttgcacattt-ctttctattataccctcattttaatccaccgata 38402063  T
Q  165 tatttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaac 264  Q
     |||  || | ||||||||||||||| ||||||||||||| ||||||| ||||| ||||||| ||||||||| ||| |  ||| ||||||||||||||||    
T  38402062 aattcttaat-ttttgcacacactttatctttccaataaacttaatatgttatcattctctcataacaaacaattg-tcgttattatctttttctccaac 38401965  T
Q  265 aaatttctttttgttttgcacactctctcttacgtaacaaatgattgtcaa-tttttaaatattgtgcacatctttttaattaatttaagtcaat 358  Q
    |||||| | ||| |||||| | ||||      | |||||||  |||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  38401964 aaatttatattt-ttttgcgctctct------cataacaaacaattgtcaactttctaaatattgtgcacatctttttaattaatttaagtcaat 38401877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 66 - 276
Target Start/End: Complemental strand, 34039504 - 34039294
Alignment:
Q  66 ttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatat 165  Q
    ||||||||||| |||| |||| |||  ||||||  |||||| | |||||||||||||||||||||||| ||||| || |||| |||||||||||||||||    
T  34039504 ttcctttttaaatgtcgttttagaattttaacacaaaaataatgaagtgtatttttacacattttctttctattttatcctcgttttaatccaccaatat 34039405  T
Q  166 atttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaaca 265  Q
    ||| ||||| | ||||||||| |||||||||||||||| |||||||| ||||||||||||| ||||||| |||||||| ||| ||| |||||||||||||    
T  34039404 attcctattttcttgcacacattttctctttccaataagtttaatatattatctttctctcataacaaatatttgttagttactatatttttctccaaca 34039305  T
Q  266 aatttcttttt 276  Q
    |||| ||||||    
T  34039304 aattccttttt 34039294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 110 - 352
Target Start/End: Complemental strand, 34146851 - 34146613
Alignment:
Q  110 aagtgtatttttacacattttcttcctattataccctcattttaatccaccaatatatttctattattttgcacacactttctctttccaataaatttaa 209  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||  |||| ||||||||||| ||| ||||||||||||||||||    
T  34146851 aagtgtatttttacacattttctttctattataccctcattttaatccaccaataaattcttatttttttgcacacattttatctttccaataaatttaa 34146752  T
Q  210 tattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaacaaatttctttttgttttgcacactctctcttacgtaacaaatgat 309  Q
    ||| |||||||||| ||| |||||||| ||||   ||| |||||||||||||||||||||||   || |||||    ||||||||  | || ||||  ||    
T  34146751 tatgttatctttctttcgcaacaaacaattgtctgttattatctttttctccaacaaatttcaactt-ttttg----ctctctctctcatatcaaacaat 34146657  T
Q  310 tgtcaa-tttttaaatattgtgcacatctttttaattaatttaa 352  Q
    ||| || ||||||||||||||| ||||||||||||||| |||||    
T  34146656 tgtgaattttttaaatattgtgtacatctttttaattattttaa 34146613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 65 - 354
Target Start/End: Complemental strand, 27232299 - 27232013
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaata 164  Q
    ||||||||||||||||  |||| |||||||||   |||| |||  | ||||| ||||  |||||||||||  |||||||||||||||||||| |||||||    
T  27232299 gttcctttttaagtgtttttttagaaaattaaacccaaattagcgatgtgtacttttgtacattttcttc--attataccctcattttaatcaaccaata 27232202  T
Q  165 tatttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaac 264  Q
     ||| ||| | ||||||||||| ||| |||||| |||||||||||||| ||||||||||||||||||||||| |||| | ||| ||||||||||||||||    
T  27232201 aattactagttttttgcacacattttatctttcaaataaatttaatatgttatctttctctcgtaacaaacaattgtcagttattatctttttctccaac 27232102  T
Q  265 aaatttctttttgtt-ttgcacactctctcttacgtaacaaatgattgtcaatttt-taaatattgtgcacatctttttaattaatttaagt 354  Q
    ||| ||||| ||||| ||||||| |||||||  | |||||||  ||||| |||||| |||||||| |||| | ||||||||||| |||||||    
T  27232101 aaa-ttcttattgttattgcacattctctct--cataacaaacaattgttaattttctaaatattttgcatacctttttaattagtttaagt 27232013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 65 - 242
Target Start/End: Original strand, 35970072 - 35970248
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaata 164  Q
    |||||||||||| | || |||| ||| ||||||| |||| ||| ||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||    
T  35970072 gttcctttttaactatcgttttagaatattaacaccaaattagcaaagtgtatttttgcacattttcttcctatcataccctcgttttaatccaccaata 35970171  T
Q  165 tatttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgtt 242  Q
    |||| ||||| |||| ||||| |||||| ||||||||||||||||||| ||||| |||||||  |||||| |||||||    
T  35970172 tattcctatt-tttttcacacgctttctttttccaataaatttaatatgttatcattctctcaaaacaaatatttgtt 35970248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 65 - 233
Target Start/End: Original strand, 29315231 - 29315399
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaata 164  Q
    |||| |||||||||||| |||| |||||||  ||| ||||||| ||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||    
T  29315231 gttcttttttaagtgtcgttttagaaaatttccatgaaaatagcaaagtgtatatttgcacattttcttcctattataccctcaatttaatccaccaata 29315330  T
Q  165 tatttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaa 233  Q
    ||| | |||| ||| ||||| ||||| ||||| ||||||||||||||| |||| ||| |||||||||||    
T  29315331 tatatttattttttggcacatactttatcttttcaataaatttaatatgttatatttttctcgtaacaa 29315399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 127 - 358
Target Start/End: Complemental strand, 11087727 - 11087495
Alignment:
Q  127 ttttcttcctattataccctcattttaatccaccaatatatttctattattttgcacacactttctctttccaataaatttaatattttatctttctctc 226  Q
    ||||| |||||||||| ||||||||||||||||||||| |||  |||| |||| || ||| ||| |||||  ||||||||||| || ||||||||||||     
T  11087727 ttttcatcctattatatcctcattttaatccaccaataaattcttattttttt-catacattttatctttttaataaatttaacatgttatctttctctt 11087629  T
Q  227 gtaacaaacatttgttaattaatatctttttctccaacaaatttctttttgttttgcacactctctctta--cgtaacaaatgattgtcaa-tttttaaa 323  Q
     ||||||||| |||| | ||| ||||||||||||||||||| ||| |||| || ||| |||||||||| |  | |||||||  |||||||| ||||||||    
T  11087628 ataacaaacaattgtcagttactatctttttctccaacaaa-ttcatttttttatgcgcactctctctcactcataacaaacaattgtcaattttttaaa 11087530  T
Q  324 tattgtgcacatctttttaattaatttaagtcaat 358  Q
    ||||||||||||||||||||||| ||||| |||||    
T  11087529 tattgtgcacatctttttaattattttaaatcaat 11087495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 117 - 259
Target Start/End: Original strand, 7694941 - 7695083
Alignment:
Q  117 tttttacacattttcttcctattataccctcattttaatccaccaatatatttctattattttgcacacactttctctttccaataaatttaatatttta 216  Q
    ||||| |||||||||||||||||||| ||||||||||||| || |||| ||| ||||| ||||||||||||||| ||||| ||||||||||||||| |||    
T  7694941 tttttgcacattttcttcctattatatcctcattttaatctacaaataaattcctatttttttgcacacactttatcttttcaataaatttaatatgtta 7695040  T
Q  217 tctttctctcgtaacaaacatttgttaattaatatctttttct 259  Q
    ||||||||| |||||||||| |||| | ||| || ||||||||    
T  7695041 tctttctcttgtaacaaacaattgtcagttattacctttttct 7695083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 126 - 358
Target Start/End: Complemental strand, 35970608 - 35970380
Alignment:
Q  126 attttcttcctattataccctcattttaatccaccaatatatttctattattttgcacacactttctctttccaataaatttaatattttatctttctct 225  Q
    ||||||||||||| |||||||| |||||||||||||||||||| || ||  ||| | |||||||||| |||  |||||||||||||| ||||||||||||    
T  35970608 attttcttcctatcataccctcgttttaatccaccaatatattcctttt--tttccgcacactttctttttt-aataaatttaatatgttatctttctct 35970512  T
Q  226 cgtaacaaacatttgttaattaatatctttttctccaacaaatttctttttgttttgcacactctctcttacgtaacaaatgattgtcaatttttaaata 325  Q
    | ||||||| |||||||| ||| |||||||| || ||| |||||| ||| | ||||||||||| ||||   | |||||||  ||||||||||||| || |    
T  35970511 cataacaaatatttgttagttactatcttttacttcaataaatttatttattttttgcacactttctcccccataacaaacaattgtcaattttttaaaa 35970412  T
Q  326 ttgtgcacatctttttaattaatttaagtcaat 358  Q
     | |||| |||| |||||||| |||||||||||    
T  35970411 at-tgcatatctctttaattattttaagtcaat 35970380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 65 - 239
Target Start/End: Complemental strand, 3742360 - 3742186
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaata 164  Q
    |||||||||| | |||| |||| |||||||  ||  ||||||  ||||||||||||| |||||||||||  ||||||||||||| |||||||||||||||    
T  3742360 gttccttttttaatgtcgttttcgaaaatttccacaaaaataacaaagtgtatttttgcacattttctttttattataccctcaatttaatccaccaata 3742261  T
Q  165 tatttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacattt 239  Q
    ||| |||| | |||  | |||||||| ||||||||||||||||||||| |||| ||| |||| ||||||||||||    
T  3742260 tatctctactttttgacgcacactttatctttccaataaatttaatatgttatatttttctcataacaaacattt 3742186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 69 - 215
Target Start/End: Original strand, 1256235 - 1256381
Alignment:
Q  69 ctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatatatt 168  Q
    ||||||||||||| |||| ||||||||||| | || ||| |  |||||||||| |||||||| | |||||||||| || ||||||||||||||||| |||    
T  1256235 ctttttaagtgtctttttagaaaattaacaccgaattagcattgtgtatttttgcacattttttccctattatactctaattttaatccaccaataaatt 1256334  T
Q  169 tctattattttgcacacactttctctttccaataaatttaatatttt 215  Q
      |||| ||| ||||||||||| ||||||||||||||||||||||||    
T  1256335 cttattttttagcacacactttatctttccaataaatttaatatttt 1256381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 225 - 358
Target Start/End: Original strand, 29315414 - 29315548
Alignment:
Q  225 tcgtaacaaacatttgttaattaatatctttttctccaacaaatt--tctttttgttttgcacactctctcttacgtaacaaatgattgtcaa-ttttta 321  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||  | ||||| |||||||||||||||||  | |||||||  |||||||| ||||||    
T  29315414 tcgtaacaaacatttgttacttactatctttttctccaacaaattcgttttttttttttgcacactctctct--cataacaaacaattgtcaatttttta 29315511  T
Q  322 aatattgtgcacatctttttaattaatttaagtcaat 358  Q
    ||||| |||||||||| |||||||||||||| |||||    
T  29315512 aatatcgtgcacatctctttaattaatttaactcaat 29315548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 65 - 209
Target Start/End: Complemental strand, 36683542 - 36683400
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaata 164  Q
    ||||| ||||||||||  |||| |||||||  ||| ||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||| || || |    
T  36683542 gttcccttttaagtgttgttttagaaaatttccatgaaaatagcaaagtgtatttttgcacattttcttcctattataccctcaatttaatcgactaaca 36683443  T
Q  165 tatttctattattttgcacacactttctctttccaataaatttaa 209  Q
    ||| |||||| ||| |  |||||||| ||||||||||||||||||    
T  36683442 tatctctattttttgg--cacactttatctttccaataaatttaa 36683400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 65 - 241
Target Start/End: Original strand, 1530198 - 1530374
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaata 164  Q
    |||| |||| ||||||  |||| ||||||||||| | || |||  | |||||||||| || ||||||||| ||||||||| ||||||||||| || ||||    
T  1530198 gttcattttgaagtgtttttttagaaaattaacaccgaattagggaggtgtatttttgcaaattttcttcttattataccttcattttaatctacaaata 1530297  T
Q  165 tatttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgt 241  Q
      || ||||| |||| |||||| ||| ||||| ||||||||||||||| |||||||||| |||||||||||| ||||    
T  1530298 acttcctatttttttccacacattttatcttttcaataaatttaatatgttatctttctttcgtaacaaacaattgt 1530374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 69 - 212
Target Start/End: Original strand, 3443318 - 3443462
Alignment:
Q  69 ctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacaca-ttttcttcctattataccctcattttaatccaccaatatat 167  Q
    ||||||||| ||| |||| |||  ||||||  |||||||  |||||||||||| |||| |||| |||||||||||||||||||||||||||| ||||  |    
T  3443318 ctttttaagcgtcgttttagaattttaacacaaaaatagcgaagtgtatttttgcacactttttttcctattataccctcattttaatccactaataatt 3443417  T
Q  168 ttctattattttgcacacactttctctttccaataaatttaatat 212  Q
    | ||||| |||| |||||||||| ||| |||||||||||||||||    
T  3443418 tcctattctttttcacacactttatctatccaataaatttaatat 3443462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 225 - 358
Target Start/End: Complemental strand, 36683080 - 36682951
Alignment:
Q  225 tcgtaacaaacatttgttaattaatatctttttctccaacaaatttctttttgttttgcacactctctcttacgtaacaaatgattgtcaatttt-taaa 323  Q
    |||||||||| ||||||||  || |||||||||||||||||| ||| |||||   ||||||||||||||| |  |||||||  ||||| |||||| ||||    
T  36683080 tcgtaacaaatatttgttacatactatctttttctccaacaatttttttttt---ttgcacactctctctca--taacaaacaattgttaattttctaaa 36682986  T
Q  324 tattgtgcacatctttttaattaatttaagtcaat 358  Q
    ||||| |||||||| ||||||||||||||||||||    
T  36682985 tattgcgcacatctctttaattaatttaagtcaat 36682951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 69 - 212
Target Start/End: Complemental strand, 9455704 - 9455562
Alignment:
Q  69 ctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatatatt 168  Q
    ||||||||||||||||||  ||  ||||||  ||||||| ||||||||||||| |||| ||| || ||||||||||||||||||||| ||| |||| |||    
T  9455704 ctttttaagtgtcattttaaaattttaacacaaaaatagcaaagtgtatttttgcacacttt-tttctattataccctcattttaatacactaata-att 9455607  T
Q  169 tc-tattattttgcacacactttctctttccaataaatttaatat 212  Q
    || || | ||||||||||| ||| | |||||||||||||||||||    
T  9455606 tcttacttttttgcacacattttatttttccaataaatttaatat 9455562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 184 - 269
Target Start/End: Original strand, 30887514 - 30887599
Alignment:
Q  184 acactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaacaaatt 269  Q
    ||||||| |||||  |||||||||||||| | || |||||||| |||||||||||||||| ||| |||||||||||||||||||||    
T  30887514 acactttatctttttaataaatttaatatgtaatttttctctcctaacaaacatttgttagttactatctttttctccaacaaatt 30887599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 65 - 151
Target Start/End: Complemental strand, 13385527 - 13385441
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattt 151  Q
    |||| |||||||||||| |||||||| | |||||  ||| ||  ||||||||| |||||||||||||||||||||||||||||||||    
T  13385527 gttcttttttaagtgtcgttttggaatagtaacacaaaattaagaaagtgtatatttacacattttcttcctattataccctcattt 13385441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 69 - 173
Target Start/End: Complemental strand, 38459181 - 38459081
Alignment:
Q  69 ctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatatatt 168  Q
    ||||||||||||| |||   ||||||| ||||||||||    | |||||||||||||| |||||| |||||||||||||||||||||||| ||||| |||    
T  38459181 ctttttaagtgtcttttaaaaaaattaccatcaaaata----actgtatttttacacaatttctttctattataccctcattttaatccaacaataaatt 38459086  T
Q  169 tctat 173  Q
     ||||    
T  38459085 cctat 38459081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 299 - 360
Target Start/End: Original strand, 16599072 - 16599134
Alignment:
Q  299 taacaaatgattgtcaatttt-taaatattgtgcacatctttttaattaatttaagtcaattt 360  Q
    |||||||| ||| |||||||| |||||||||||||||||| |||||||| |||||||||||||    
T  16599072 taacaaataattatcaattttctaaatattgtgcacatctctttaattattttaagtcaattt 16599134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 212
Target Start/End: Original strand, 2742601 - 2742682
Alignment:
Q  135 ctattataccctcattttaatccaccaatatatttctattatttt-----gcacacactttctctttccaataaatttaatat 212  Q
    ||||||||||||||||||||||||| |||| |||||| || ||||     ||||||| ||| |||||||||||||||||||||    
T  2742601 ctattataccctcattttaatccactaata-atttcttttttttttttttgcacacattttatctttccaataaatttaatat 2742682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 275
Target Start/End: Complemental strand, 3742142 - 3742096
Alignment:
Q  229 aacaaacatttgttaattaatatctttttctccaacaaatttctttt 275  Q
    ||||||||||||||| ||| |||||||||||||||||| ||| ||||    
T  3742142 aacaaacatttgttatttactatctttttctccaacaattttttttt 3742096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Complemental strand, 7940450 - 7940421
Alignment:
Q  181 cacacactttctctttccaataaatttaat 210  Q
    ||||||||||||||||||||||||||||||    
T  7940450 cacacactttctctttccaataaatttaat 7940421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 141; Significance: 8e-74; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 66 - 354
Target Start/End: Complemental strand, 16197475 - 16197192
Alignment:
Q  66 ttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatat 165  Q
    |||||||||||||||| |||| ||||||||||| ||||||||| | |||||||||| ||||||||||| |||||||||||||||||||||||| |||||     
T  16197475 ttcctttttaagtgtctttttagaaaattaacaccaaaatagtgatgtgtatttttgcacattttctttctattataccctcattttaatccatcaataa 16197376  T
Q  166 atttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaaca 265  Q
    ||| ||||| ||||||| | ||||| ||||||||||||||||||||| |||||||||||| |||||||||| |||| | ||| ||||||||| |||||||    
T  16197375 attcctatt-ttttgcataaactttatctttccaataaatttaatatgttatctttctcttgtaacaaacaattgtcagttattatctttttttccaaca 16197277  T
Q  266 aatttctttttgttttgcacactctctcttacgtaacaaatgattgtcaa-tttttaaatattgtgcacatctttttaattaatttaagt 354  Q
    |||| || ||| |||||||||||||||    | |||||||  |||||||| |||||||||||||||||| |||||||||||| |||||||    
T  16197276 aattcctattt-ttttgcacactctct----cataacaaacaattgtcaattttttaaatattgtgcacgtctttttaattattttaagt 16197192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 69 - 358
Target Start/End: Complemental strand, 4568004 - 4567718
Alignment:
Q  69 ctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatatatt 168  Q
    |||||||| |||| |||| ||||||||||||||||||||   ||||||||||||||| || |||| ||||||||||||||||||||||||||| || |||    
T  4568004 ctttttaaatgtctttttagaaaattaacatcaaaatagcgcagtgtatttttacacgttatctttctattataccctcattttaatccaccactaaatt 4567905  T
Q  169 tctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaacaaat 268  Q
      |||| ||||||||||||||| ||||||||||||||||||||| |||| |||||||| ||||||||| |||| ||||| ||||||||||| |  |||||    
T  4567904 cttatt-ttttgcacacactttatctttccaataaatttaatatgttatatttctctcataacaaacaattgtcaattattatctttttcttcggcaaat 4567806  T
Q  269 ttctttttgttttgcacactctctcttacgtaacaaatgattgtcaatttt-taaatattgtgcacatctttttaattaatttaagtcaat 358  Q
    |||| ||| | |||||||||||||||  | |||||||  ||||| |||||| ||||||||||||||||||||||||||| ||| |||||||    
T  4567805 ttctattt-tcttgcacactctctct--cataacaaacaattgttaattttctaaatattgtgcacatctttttaattattttcagtcaat 4567718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 73 - 290
Target Start/End: Complemental strand, 2798985 - 2798769
Alignment:
Q  73 ttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatatatttcta 172  Q
    |||| |||| ||||| || ||||||| |||| |||| |||||||||||| ||  ||| |||||||||||||||| ||| |||||||||||||||||||||    
T  2798985 ttaaatgtcgttttgaaatattaacaccaaattagtgaagtgtatttttgcatctttacttcctattatacccttattctaatccaccaatatatttcta 2798886  T
Q  173 ttattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaacaaatttct 272  Q
    || |||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||| || ||||||| ||| ||||||||||||||||| ||    
T  2798885 tttttttgcacacactttctctttctaataaatttaatatgttatctttcgctcgtaacaaacaatttttaattactatatttttctccaacaaattcct 2798786  T
Q  273 ttttgttttgcacactct 290  Q
     ||| |||||||||||||    
T  2798785 attt-ttttgcacactct 2798769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 65 - 269
Target Start/End: Complemental strand, 28226941 - 28226737
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaata 164  Q
    |||| |||||||||||| |||||||| ||||||| |||| |||  | ||||||||||  |  ||| |||||||||||||||| |||||||||||  ||||    
T  28226941 gttcatttttaagtgtcgttttggaatattaacaccaaattagcgatgtgtatttttgtatctttacttcctattatacccttattttaatccaataata 28226842  T
Q  165 tatttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaac 264  Q
    |||| ||||| ||||||||||| | | ||||||||||||||||||||| |||||||||| |||||||||||| |||||| ||||||||||||||||||||    
T  28226841 tattcctattgttttgcacacattatatctttccaataaatttaatatgttatctttctatcgtaacaaacaattgttagttaatatctttttctccaac 28226742  T
Q  265 aaatt 269  Q
    |||||    
T  28226741 aaatt 28226737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 65 - 358
Target Start/End: Complemental strand, 27723904 - 27723625
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaata 164  Q
    ||||||||| ||||||| |||| ||||||||||| ||||||||  | || |||||||| | |||||||||||||||||||||||||||||||||||||||    
T  27723904 gttccttttgaagtgtcgttttagaaaattaacaccaaaatagcgatgtatatttttaaatattttcttcctattataccctcattttaatccaccaata 27723805  T
Q  165 tatttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaac 264  Q
     |||||||||      |||||||||| ||||||||||||||||||||| |||| ||||||  |||||||||       ||||| | ||||||||||||||    
T  27723804 aatttctattt-----cacacactttatctttccaataaatttaatatgttatttttctcctgtaacaaac-------aattattgtctttttctccaac 27723717  T
Q  265 aaatttctttttgttttgcacactctctcttacgtaacaaatgattgtcaatttt-taaatattgtgcacatctttttaattaatttaagtcaat 358  Q
    ||| ||| | |  |||| | ||||||||||  | |||||||  |||||||||||| ||||||||||||||||||||||||||| | |||||||||    
T  27723716 aaa-ttcctatgcttttacgcactctctct--cataacaaacaattgtcaattttctaaatattgtgcacatctttttaattattgtaagtcaat 27723625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 65 - 275
Target Start/End: Complemental strand, 17270235 - 17270026
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaata 164  Q
    ||||||||||||||||| |||| ||||||||| | ||||||| | |||||| |||||||||||||| | |||||||||| |||||||||||||| ||||     
T  17270235 gttcctttttaagtgtcgttttagaaaattaataccaaaataatgaagtgtgtttttacacattttttccctattatactctcattttaatccatcaatt 17270136  T
Q  165 tatttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaac 264  Q
    |||| ||||| ||||| | |||||||||| || ||||| ||||||||| |||| |||||||||||||||||||||||||  || ||||||||||| ||||    
T  17270135 tattcctatt-ttttgtatacactttctcgtttcaatatatttaatatattatatttctctcgtaacaaacatttgttagatactatctttttctacaac 17270037  T
Q  265 aaatttctttt 275  Q
    || ||| ||||    
T  17270036 aattttttttt 17270026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 66 - 246
Target Start/End: Complemental strand, 37124803 - 37124624
Alignment:
Q  66 ttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatat 165  Q
    |||||||||||||||| |||| |||||||| ||||||||||| || |||| ||||| |||||||||||||||||||||||| ||||||||| || ||||     
T  37124803 ttcctttttaagtgtctttttagaaaattagcatcaaaatagcaatgtgtgtttttgcacattttcttcctattataccctgattttaatcaacaaata- 37124705  T
Q  166 atttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaatt 246  Q
    | |||  || ||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||| |||| ||||    
T  37124704 aattcattttttttgcacacactttatctttccaataaatttaatatgttatctttctctcataacaaacaattgtcaatt 37124624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 65 - 319
Target Start/End: Original strand, 41746905 - 41747158
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaata 164  Q
    |||| |||||||||||| ||||| || || ||||||||| |||  || ||||||||||||||||| | || |||| ||| ||  || |||||||  ||||    
T  41746905 gttcttttttaagtgtcgttttgaaatatcaacatcaaattagcgaaatgtatttttacacatttacctcatattgtactctt-ttgtaatccattaata 41747003  T
Q  165 tatttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaac 264  Q
    |||||||||| |||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||| ||| |||||||| |||    
T  41747004 tatttctattttttt-cacgcactttctcttttcaataaatttaatattttatctttctctcgtaacaaacaattgttagttactatatttttctctaac 41747102  T
Q  265 aaatttctttttgttttgcacactc--tctcttacgtaacaaatgattgtcaatttt 319  Q
    |||||| || || ||||||||||||  |||||  | |||||||| ||||||||||||    
T  41747103 aaattt-ttatttttttgcacactcggtctctctcataacaaataattgtcaatttt 41747158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 83 - 358
Target Start/End: Original strand, 35792520 - 35792797
Alignment:
Q  83 ttttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatatatttctattattttgca 182  Q
    |||| |||||||||||  |||||||  | |||||||||| || ||||| |||||||||||||||||||| | |||||||||| ||| ||||| |||        
T  35792520 ttttagaaaattaacacaaaaatagcgatgtgtatttttgcatatttttttcctattataccctcattt-actccaccaataaattcctattttttattt 35792618  T
Q  183 cacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaacaaa----tttctttttgt 278  Q
    |||||||| |||||| |||||||||||||| ||||||||||||||||||||||| |||| | ||| ||||||||||||||| |||    ||| ||||| |    
T  35792619 cacactttatctttctaataaatttaatatgttatctttctctcgtaacaaacaattgtaacttattatctttttctccaaaaaaatccttttttttttt 35792718  T
Q  279 tttgcacactctctcttacgtaacaaatgattgtcaatttt-taaatattgtgcacatctttttaattaatttaagtcaat 358  Q
    | ||| | ||||||||  | |||||||  |||||||||||| || ||||| |||||||||||||||||| |||||||||||    
T  35792719 tgtgcgcgctctctct--cataacaaacaattgtcaattttctagatattatgcacatctttttaattattttaagtcaat 35792797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 65 - 272
Target Start/End: Complemental strand, 43369172 - 43368968
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaata 164  Q
    ||||||||||||||||| |||| ||| ||||||| |||| ||  |||||||| |||| ||| ||| ||| || ||||||||| | |||||||||| ||||    
T  43369172 gttcctttttaagtgtcgttttagaatattaacaccaaattaa-aaagtgtaattttgcacctttacttactgttatacccttactttaatccacaaata 43369074  T
Q  165 tatttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaac 264  Q
    |||||||||| |||||||||||||  |||||| ||||||||||||||| |||| ||||||||||||||| || |||||| ||| ||| ||||||||||||    
T  43369073 tatttctatttttttgcacacact--ctcttttcaataaatttaatatgttatttttctctcgtaacaagcaattgttagttattatttttttctccaac 43368976  T
Q  265 aaatttct 272  Q
    ||||||||    
T  43368975 aaatttct 43368968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 77 - 281
Target Start/End: Complemental strand, 39618304 - 39618102
Alignment:
Q  77 gtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatatatttctattat 176  Q
    ||||| |||| |||||||||||| ||||||   | |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||  |||| |    
T  39618304 gtgtctttttagaaaattaacataaaaatatagatgtgtatttttgcacattttcttcctattataccctcattttaatccaccaataaattcttatttt 39618205  T
Q  177 tttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaacaaatttcttttt 276  Q
    |||||||| | ||| |||||||||||||||||  || |||| |||||||| ||||||||| |||  | ||| ||| ||||||| ||||||||||||||||    
T  39618204 tttgcacatattttatctttccaataaattta--atgttatttttctctcataacaaacaattgccagttattatatttttcttcaacaaatttcttttt 39618107  T
Q  277 gtttt 281  Q
     ||||    
T  39618106 ttttt 39618102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 69 - 269
Target Start/End: Original strand, 2271338 - 2271536
Alignment:
Q  69 ctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatatatt 168  Q
    ||||||||||||| |||| | ||||||||| ||||||||  | |||||||||| |||||||||||||||||||| ||||||||||||| |||| || |||    
T  2271338 ctttttaagtgtctttttaggaaattaacaccaaaatagcgatgtgtatttttgcacattttcttcctattatatcctcattttaatctaccactaaatt 2271437  T
Q  169 tctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaacaaat 268  Q
      |||| |||| ||||| |||| |||||||||| |||||||||| |||| |||||||||||||||||| |||| | ||| ||||| ||||||||||||||    
T  2271438 cttattgttttccacaccctttatctttccaat-aatttaatatgttat-tttctctcgtaacaaacaattgtcagttattatctctttctccaacaaat 2271535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 65 - 236
Target Start/End: Original strand, 3835246 - 3835417
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaata 164  Q
    ||||||||||||||||  |||   ||||||| |||||||||||  | |||||||||| ||   ||||||||||||||| |||||||||||||||| ||||    
T  3835246 gttcctttttaagtgttttttaaaaaaattaccatcaaaatagcgatgtgtatttttccatgatttcttcctattatatcctcattttaatccacgaata 3835345  T
Q  165 tatttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaaca 236  Q
     ||| ||||| ||||||||||||||| ||||||||||||||||||||| |||||||||||| ||||||||||    
T  3835346 aattcctatttttttgcacacactttatctttccaataaatttaatatgttatctttctcttgtaacaaaca 3835417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 110 - 269
Target Start/End: Complemental strand, 41690366 - 41690207
Alignment:
Q  110 aagtgtatttttacacattttcttcctattataccctcattttaatccaccaatatatttctattattttgcacacactttctctttccaataaatttaa 209  Q
    ||||||||||||||||||||||||  |||||||||||||||||||| ||| |||| ||| ||| | ||| ||||| ||||| | ||||||||||||||||    
T  41690366 aagtgtatttttacacattttctttttattataccctcattttaattcacgaataaattcctactttttagcacaaactttatatttccaataaatttaa 41690267  T
Q  210 tattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaacaaatt 269  Q
    ||| |||| ||| |||||||||||||| |||| ||||| |||||||||||||||||||||    
T  41690266 tatgttatatttatctcgtaacaaacaattgtcaattattatctttttctccaacaaatt 41690207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 65 - 358
Target Start/End: Original strand, 10534419 - 10534717
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaata 164  Q
    |||||||||||| |||| |||| ||||||||||| |||||||   | |||||||||| ||| |||| ||  ||||||||| |||||||||||||||||||    
T  10534419 gttcctttttaaatgtctttttagaaaattaacaccaaaataacgatgtgtatttttgcacttttttttt-tattataccttcattttaatccaccaata 10534517  T
Q  165 tatttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaac 264  Q
     ||| ||||| ||||||||||| ||| | |||  |||||||||||||| |||||||| | |||||||||||| ||||   ||| ||||||||||||||||    
T  10534518 aattcctatttttttgcacacattttatttttttaataaatttaatatgttatctttatgtcgtaacaaacaattgtctgttattatctttttctccaac 10534617  T
Q  265 aaatttctttttgttttg------cacactctctcttacgtaacaaatgattgtcaa-tttttaaatattgtgcacatctttttaattaatttaagtcaa 357  Q
    ||||| || ||| |||||      | | ||||||||  | |||||||  |||||||| ||||||||| ||||||| ||||||||||||| | ||||||||    
T  10534618 aaattcctgttt-ttttgcgcgctctctctctctctctcataacaaacaattgtcaattttttaaattttgtgcaaatctttttaattattgtaagtcaa 10534716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 65 - 247
Target Start/End: Complemental strand, 33259044 - 33258861
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaata 164  Q
    ||||||||||||||||| |||| ||| ||||||| |||||||   ||||||||||||  | |||||||||||||||||||||||||||||||||||||||    
T  33259044 gttcctttttaagtgtcgttttagaatattaacaccaaaataacgaagtgtatttttgtagattttcttcctattataccctcattttaatccaccaata 33258945  T
Q  165 tatttcta----ttattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaatta 247  Q
    |||| |||    || ||||||| ||| |||   ||| |||||||||||||||  ||||||||||| |||||||||||||||||||||    
T  33258944 tattcctatttttttttttgcatacatttt---ttttcaataaatttaatatggtatctttctcttgtaacaaacatttgttaatta 33258861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 115 - 269
Target Start/End: Original strand, 2273282 - 2273433
Alignment:
Q  115 tatttttacacattttcttcctattataccctcattttaatccaccaatatatttctattattttgcacacactttctctttccaataaatttaatattt 214  Q
    ||||||| ||| ||| |||||||||||||||| ||||||||  ||||||||||| ||||| |||| |||||||||||||||| ||||||||||||| ||     
T  2273282 tatttttgcacctttacttcctattatacccttattttaatgtaccaatatattcctattttttt-cacacactttctcttttcaataaatttaatgtt- 2273379  T
Q  215 tatctttctctcgtaacaaacatttgttaattaatatctttttctccaacaaatt 269  Q
     ||||||||||||||||||||| |||||| ||| ||||||||||| |||||||||    
T  2273380 -atctttctctcgtaacaaacaattgttagttattatctttttcttcaacaaatt 2273433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 70 - 214
Target Start/End: Complemental strand, 15643774 - 15643631
Alignment:
Q  70 tttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatatattt 169  Q
    |||||||||||| |||| |||| ||||||  |||||||| |||||||||||| |||||||| || | ||||||||||||||||||||||| ||||  |||    
T  15643774 tttttaagtgtcgttttagaaatttaacacaaaaatagttaagtgtatttttgcacatttt-ttacgattataccctcattttaatccactaataatttt 15643676  T
Q  170 ctattattttgcacacactttctctttccaataaatttaatattt 214  Q
    ||||| ||||||||||| ||| |||||||||||||||||||||||    
T  15643675 ctatttttttgcacacattttatctttccaataaatttaatattt 15643631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 113 - 267
Target Start/End: Original strand, 8614563 - 8614717
Alignment:
Q  113 tgtatttttacacattttcttcctattataccctcattttaatccaccaatatatttctattatttt-gcacacactttctctttccaataaatttaata 211  Q
    ||||||||  ||||||| |||  ||||||||| ||||||||||||||||||| ||| || || |||| ||||||||||| |||||| |||||||| ||||    
T  8614563 tgtattttagcacatttgctttttattataccttcattttaatccaccaataaattcctcttttttttgcacacactttatctttctaataaatt-aata 8614661  T
Q  212 ttttatctttctctcgtaacaaacatttgttaattaatatctttttctccaacaaa 267  Q
    | ||||||||||||||||||||||| |||| | ||| |||||||||||||||||||    
T  8614662 tattatctttctctcgtaacaaacaattgtcagttattatctttttctccaacaaa 8614717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 65 - 212
Target Start/End: Original strand, 14771025 - 14771172
Alignment:
Q  65 gttcctttttaagtgtca-ttttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaat 163  Q
    |||||||||||||||||| |||| |||  ||||||  |||||||||||||||||||||||||| ||| |  ||||||||||||||||||||||||| |||    
T  14771025 gttcctttttaagtgtcagttttagaattttaacacaaaaatagtaaagtgtatttttacacactttttctctattataccctcattttaatccactaat 14771124  T
Q  164 atatttctattattttgcacacactttctctttccaataaatttaatat 212  Q
    |  || ||||| ||||||||||||||| ||||| ||||||||| |||||    
T  14771125 aatttcctatt-ttttgcacacactttatcttttcaataaattaaatat 14771172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 65 - 212
Target Start/End: Original strand, 15221477 - 15221624
Alignment:
Q  65 gttcctttttaagtgtca-ttttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaat 163  Q
    |||||||||||||||||| |||| |||  ||||||  |||||||||||||||||||||||||| ||| |  ||||||||||||||||||||||||| |||    
T  15221477 gttcctttttaagtgtcagttttagaattttaacacaaaaatagtaaagtgtatttttacacactttttctctattataccctcattttaatccactaat 15221576  T
Q  164 atatttctattattttgcacacactttctctttccaataaatttaatat 212  Q
    |  || ||||| ||||||||||||||| ||||| ||||||||| |||||    
T  15221577 aatttcctatt-ttttgcacacactttatcttttcaataaattaaatat 15221624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 65 - 212
Target Start/End: Original strand, 4962546 - 4962692
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaata 164  Q
    ||||||||||||||| | |||| |||  ||||||  |||||||| || ||||||||| |||| ||| ||||||||||||||||||||||||| || ||||    
T  4962546 gttcctttttaagtgccgttttagaattttaacacaaaaatagtgaaatgtattttttcacacttttttcctattataccctcattttaatcaactaata 4962645  T
Q  165 tatttctattattttgcacacactttctctttccaataaatttaatat 212  Q
      || ||||| ||||||||||||||| |||||||||||||||||||||    
T  4962646 atttcctatt-ttttgcacacactttatctttccaataaatttaatat 4962692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 139 - 294
Target Start/End: Original strand, 39599424 - 39599582
Alignment:
Q  139 tataccctcattttaatccaccaatatatttctattattttgcacacactttctct--ttccaataaatttaatattttatctttctctcgtaacaaaca 236  Q
    |||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||  || ||||||||||||||| |||| ||||| |||||||||||     
T  39599424 tataccctaattttaatccaccaatatattcctatt-ttttgcacacactttctctcttttcaataaatttaatatcttatttttctttcgtaacaaacg 39599522  T
Q  237 tttgtta---attaatatctttttctccaacaaatttctttttgttttgcacactctctct 294  Q
     ||||||    ||| ||||||||||||||||||||||| | ||||||| ||| ||||||||    
T  39599523 attgttagttgttactatctttttctccaacaaatttc-tattgttttacactctctctct 39599582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 113 - 233
Target Start/End: Complemental strand, 47542034 - 47541912
Alignment:
Q  113 tgtatttttacacattttcttcctattataccctcattttaatccaccaatatatttctat---tattttgcacacactttctctttccaataaatttaa 209  Q
    ||||||||| ||| |||||||||||||||||| ||||||||||||||||||| |||||| |   | |||||| |||||||| ||||||||||||||||||    
T  47542034 tgtatttttgcacgttttcttcctattatacc-tcattttaatccaccaataaatttctctgttttttttgcgcacactttatctttccaataaatttaa 47541936  T
Q  210 tattttatctttctctcgtaacaa 233  Q
    ||| |||| |||||||||||||||    
T  47541935 tatgttatatttctctcgtaacaa 47541912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 65 - 210
Target Start/End: Original strand, 46671628 - 46671775
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaatt-aacatcaaaatagtaaagtgtatttttacaca-ttttcttcctattataccctcattttaatccaccaa 162  Q
    ||||||||||||||||| |||| |||  || ||||  ||||||| |||| |||||||| |||| |||| ||||||||||||||||||||||| |||| ||    
T  46671628 gttcctttttaagtgtcgttttagaatttttaacacaaaaatagcaaagggtatttttgcacaatttttttcctattataccctcattttaagccactaa 46671727  T
Q  163 tatatttctattattttgcacacactttctctttccaataaatttaat 210  Q
    ||  |||||||| ||||||||||||||| | |||||||||||||||||    
T  46671728 taattttctatttttttgcacacactttatttttccaataaatttaat 46671775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 110 - 247
Target Start/End: Original strand, 10025848 - 10025985
Alignment:
Q  110 aagtgtatttttacacattttcttcctattataccctcattttaatccaccaatatatttctattattttgcacacactttctctttccaataaatttaa 209  Q
    |||| ||||||| ||||||| |||| | ||||||||| ||||||||||| ||||| |||  | || ||| ||||||| ||||||||| ||||||||||||    
T  10025848 aagtttatttttgcacatttacttcttgttatacccttattttaatccatcaatacattcatgttttttagcacacaatttctcttttcaataaatttaa 10025947  T
Q  210 tattttatctttctctcgtaacaaacatttgttaatta 247  Q
    ||| |||||||||| | |||||||||| ||||||||||    
T  10025948 tatgttatctttcttttgtaacaaacaattgttaatta 10025985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 65 - 212
Target Start/End: Complemental strand, 39434576 - 39434428
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaatt-aacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaat 163  Q
    ||||||||||||||||| |||| |||  || || |  |||||||  |||||||||||| |||| ||| ||||||||||||||| ||||||||| || |||    
T  39434576 gttcctttttaagtgtcgttttagaatttttaatacaaaaatagcgaagtgtatttttgcacacttttttcctattatacccttattttaatcgactaat 39434477  T
Q  164 atatttctattattttgcacacactttctctttccaataaatttaatat 212  Q
    |  || ||||| || |||||||||||| |||||||||||||||||||||    
T  39434476 aatttcctatttttgtgcacacactttatctttccaataaatttaatat 39434428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 149 - 353
Target Start/End: Complemental strand, 12394767 - 12394563
Alignment:
Q  149 ttttaatccaccaatatatttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaa 248  Q
    ||||||||||||||||   |  |||| ||||||||||| |||  ||||||||||||||||| || ||||||||||||| ||||||||| |||| | |||     
T  12394767 ttttaatccaccaataacatcttattgttttgcacacattttagctttccaataaatttaacatgttatctttctctcttaacaaacaattgtcagttat 12394668  T
Q  249 tatc-tttttctccaacaaatttctttttgttttgcacactctctcttacgtaacaaatgattgtcaatttt-taaatattgtgcacatctttttaatta 346  Q
    |||| ||||||||||| ||||| |  ||  ||| |||  ||||||||  | || ||||  |||||||||||| |||||||||||||||||||||| ||||    
T  12394667 tatcttttttctccaataaattccaatt--tttcgcattctctctctgtcatatcaaacaattgtcaattttctaaatattgtgcacatcttttttatta 12394570  T
Q  347 atttaag 353  Q
     ||||||    
T  12394569 ttttaag 12394563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 65 - 164
Target Start/End: Complemental strand, 12394877 - 12394778
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaata 164  Q
    |||||||  |||||||| |||| |||||| |||| ||||||| | | ||| |||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  12394877 gttccttcctaagtgtctttttagaaaatgaacaccaaaataatgatgtgcatttttgcacattttcttcctattatactctcattttaatccaccaata 12394778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 70 - 269
Target Start/End: Original strand, 27228902 - 27229098
Alignment:
Q  70 tttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccc-tcattttaatccaccaatatatt 168  Q
    |||||||||||| |||||||||| |||||||||| ||   |||||| |||    |||||||||| ||||||||||| |||||||||| || ||||| |||    
T  27228902 tttttaagtgtcgttttggaaaagtaacatcaaattaaagaagtgtgttta---acattttcttactattatacccatcattttaattcaacaataaatt 27228998  T
Q  169 tctattatttt--gcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaacaa 266  Q
     || || ||||  ||| |||||||||||||||   ||||||||| | |||||||| || | ||||||||| |||||| ||| | ||||||||| ||||||    
T  27228999 cctttttttttttgcaaacactttctctttcc---aaatttaatgtgttatctttatcacataacaaacaattgttagttactctctttttcttcaacaa 27229095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 65 - 212
Target Start/End: Complemental strand, 4679008 - 4678859
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttct---tcctattataccctcattttaatccacca 161  Q
    ||||||||||||||||||||||  ||  ||||||  |||||||  |||||||||||||||| |||| |   || ||||||| |||||||||||||||| |    
T  4679008 gttcctttttaagtgtcattttataattttaacacaaaaatagcgaagtgtatttttacactttttttttctcttattatatcctcattttaatccacta 4678909  T
Q  162 atatatttc-tattattttgcacacactttctctttccaataaatttaatat 212  Q
    | | ||||| |||| ||||| ||||||||| |||||||||||||||||||||    
T  4678908 aca-atttcatatt-ttttgtacacactttatctttccaataaatttaatat 4678859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 65 - 212
Target Start/End: Original strand, 39429922 - 39430072
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacaca---ttttcttcctattataccctcattttaatccacca 161  Q
    |||| |||||||||||||||||  ||  ||||||  |||||||  |||||||||||| ||||   |||| || |||||||||||| ||||||||| || |    
T  39429922 gttcatttttaagtgtcattttataattttaacacaaaaatagcgaagtgtatttttgcacacttttttttttctattatacccttattttaatcaacta 39430021  T
Q  162 atatatttctattattttgcacacactttctctttccaataaatttaatat 212  Q
     ||  || ||||| || |||||||||||| ||||| |||||||||||||||    
T  39430022 ttaatttcctatttttgtgcacacactttatcttttcaataaatttaatat 39430072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 136 - 226
Target Start/End: Original strand, 372403 - 372492
Alignment:
Q  136 tattataccctcattttaatccaccaatatatttctattattttgcacacactttctctttccaataaatttaatattttatctttctctc 226  Q
    ||||||||||| ||||||||| ||||||||||| ||||| ||||   |||||||||||||| ||||||||||||||| || ||| ||||||    
T  372403 tattatacccttattttaatctaccaatatattgctatttttttatgcacactttctcttt-caataaatttaatatgttctctctctctc 372492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 270
Target Start/End: Original strand, 7808801 - 7808895
Alignment:
Q  176 ttttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaacaaattt 270  Q
    ||||||||| | ||||||||| ||||||||||||||| |||| |||||||| |||||||||  ||||| ||| |  || ||||||||||||||||    
T  7808801 ttttgcacaaaatttctcttttcaataaatttaatatgttatatttctctcataacaaacaaatgttagttactccctctttctccaacaaattt 7808895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 299 - 358
Target Start/End: Original strand, 2271552 - 2271612
Alignment:
Q  299 taacaaatgattgtcaatttt-taaatattgtgcacatctttttaattaatttaagtcaat 358  Q
    |||||||  |||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  2271552 taacaaacaattgtcaattttctaaatattgtgcacatctttttaattattttaagtcaat 2271612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 65 - 164
Target Start/End: Original strand, 1752047 - 1752146
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaata 164  Q
    |||| |||||||||||  |||||||| | ||||| |||  ||   |||||||||||| ||||||||||| ||||||||||||||| |||||||| |||||    
T  1752047 gttcttttttaagtgttgttttggaataataacaccaatttaaggaagtgtattttttcacattttctttctattataccctcatgttaatccatcaata 1752146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 134 - 243
Target Start/End: Original strand, 1719580 - 1719689
Alignment:
Q  134 cctattataccctcattttaatccaccaatatatttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaa 233  Q
    ||||||||||| |  |||||||||||||||| |||  |||  |||| || ||||||||||||| ||||||||||||| | |||||| || ||| | ||||    
T  1719580 cctattataccattgttttaatccaccaataaattcttatatttttacatacactttctcttttcaataaatttaatgtgttatctatccctcatcacaa 1719679  T
Q  234 acatttgtta 243  Q
    ||| ||||||    
T  1719680 acaattgtta 1719689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 127 - 265
Target Start/End: Original strand, 21529146 - 21529279
Alignment:
Q  127 ttttcttcctattataccctcattttaatccaccaatatatttctattattttgcacacactttctctttccaataaatttaatattttatctttctctc 226  Q
    ||||||||| ||||||||||||| | |||||||||||| |||  |||| |||| |||| | |||||| |   ||||||| |||||| |||||||||||||    
T  21529146 ttttcttccaattataccctcatgt-aatccaccaataaattcttattttttt-cacaaaatttctcat---aataaatctaatatgttatctttctctc 21529240  T
Q  227 gtaacaaacatttgttaattaatatctttttctccaaca 265  Q
     ||||||||| |||||| ||| | |||  ||||||||||    
T  21529241 ataacaaacaattgttagttactctctccttctccaaca 21529279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 132 - 212
Target Start/End: Original strand, 24393759 - 24393838
Alignment:
Q  132 ttcctattataccctcattttaatccaccaatatatttctattattttgcacacactttctctttccaataaatttaatat 212  Q
    |||| |||||||| |||||||||||||| ||||  ||| || | |||| |||||||||| |||||||||||||||||||||    
T  24393759 ttccaattataccgtcattttaatccactaataattttttaatttttt-cacacactttatctttccaataaatttaatat 24393838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 299 - 358
Target Start/End: Complemental strand, 37124642 - 37124582
Alignment:
Q  299 taacaaatgattgtcaatttt-taaatattgtgcacatctttttaattaatttaagtcaat 358  Q
    |||||||  |||||||||||| |||||| |||||||||||||||||||| |||||||||||    
T  37124642 taacaaacaattgtcaattttctaaataatgtgcacatctttttaattattttaagtcaat 37124582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 71 - 169
Target Start/End: Original strand, 25741605 - 25741704
Alignment:
Q  71 ttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcatttt-aatccaccaatatattt 169  Q
    ||||||||||||| || ||  ||||||| | ||||||| |||||| ||||| ||| |||||||||||||||| | ||||||| ||||||||  |||||||    
T  25741605 ttttaagtgtcatattagagtattaacagctaaatagtgaagtgtttttttgcaccttttcttcctattatatcttcattttcaatccacctttatattt 25741704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 276
Target Start/End: Original strand, 14734638 - 14734767
Alignment:
Q  147 cattttaatccaccaatatatttctattattttgcaca-cactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaat 245  Q
    ||||||||| || ||||| |||| |||| ||||||| | |||||||| |||||||||||||| || | |||| |||||||  ||||||||| |||||| |    
T  14734638 cattttaattcatcaataaatttttatt-ttttgcaaaacactttctttttccaataaatttgatgtgttatttttctctgataacaaacaattgttatt 14734736  T
Q  246 taatatctttttctccaacaaatttcttttt 276  Q
    || | |||||| || |||||| ||| |||||    
T  14734737 tactctcttttccttcaacaatttttttttt 14734767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 212
Target Start/End: Complemental strand, 46094598 - 46094515
Alignment:
Q  126 attttcttcctattataccctcattttaatccaccaatatatttctattattttgcacacactttctctttccaataaatttaatat 212  Q
    ||||| || |||||||||  ||||||||||| |   |||||||||||   |||||||||||||||||||||  ||||||||||||||    
T  46094598 attttttttctattatactttcattttaatcaa---atatatttctaactttttgcacacactttctctttttaataaatttaatat 46094515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 210
Target Start/End: Complemental strand, 45635303 - 45635209
Alignment:
Q  113 tgtatttttacacattttcttcctattataccctcattttaatccaccaatatatttctattattttgcacacactttctctttccaataaatttaat 210  Q
    ||||||||| ||  ||||||| |||||||||  || | |||||||||| ||| ||||||||| ||||  ||||| ||||||| |||||||||||||||    
T  45635303 tgtatttttgcatgttttctttctattatacg-tcgtgttaatccaccgataaatttctattttttt--acacattttctctgtccaataaatttaat 45635209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 65 - 212
Target Start/End: Complemental strand, 25291098 - 25290951
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaatt-aacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaat 163  Q
    ||||||||||||||||| |||| |||  || ||||  |||||||  |||||||||||| |||   || ||||||||  | ||||||||||||||||  ||    
T  25291098 gttcctttttaagtgtcgttttagaatttttaacacaaaaatagcgaagtgtatttttgcacgcatttttcctattggatcctcattttaatccactgat 25290999  T
Q  164 atatttctattattttgcacacactttctctttccaataaatttaatat 212  Q
    |  || ||||| |||| |||||| ||| |  ||||||||||||||||||    
T  25290998 aatttcctatt-tttttcacacattttatgattccaataaatttaatat 25290951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 139; Significance: 1e-72; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 65 - 358
Target Start/End: Complemental strand, 45647218 - 45646926
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaata 164  Q
    |||| |||||||||||  |||| |||||||||||| |||||||  | ||||||| || |||||||||||||||||||||||||||||||||||  |||||    
T  45647218 gttcatttttaagtgtttttttagaaaattaacataaaaatagcgatgtgtattcttgcacattttcttcctattataccctcattttaatccgtcaata 45647119  T
Q  165 tatttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaac 264  Q
     |||  |||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||| |||| | ||| ||||||||||||||||    
T  45647118 aattcatatt-ttttgcacacactttatctttccaataaatttaatatgttatctttctctcataacaaacaattgtcacttattatctttttctccaac 45647020  T
Q  265 aaatttctttttgttttgcacactctctcttacgtaacaaatgattgtcaatttt-taaatattgtgcacatctttttaattaatttaagtcaat 358  Q
    ||||| || ||| |||||| |||||| |||| ||||| |||  |||||||||||| |||||||||||| |||||||||||||| ||||| |||||    
T  45647019 aaattcctattt-ttttgcgcactctatctttcgtaataaacaattgtcaattttctaaatattgtgcgcatctttttaattattttaaatcaat 45646926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 65 - 358
Target Start/End: Original strand, 16236986 - 16237280
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaata 164  Q
    ||||||||||||||||| |||| |||||||||||  |||||||  | |||||||||| ||||||||||||||||||||||||||||||||||||  ||||    
T  16236986 gttcctttttaagtgtctttttagaaaattaacacaaaaatagcgatgtgtattttttcacattttcttcctattataccctcattttaatccataaata 16237085  T
Q  165 tatttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaac 264  Q
     ||| ||||| | ||||||||||||| ||| |||||||||||||| || |||| ||||||||||||||||||  ||| | ||| ||||||||||| ||||    
T  16237086 aattcctattttcttgcacacactttatctctccaataaatttaaaatgttatttttctctcgtaacaaacaactgtcagttattatctttttcttcaac 16237185  T
Q  265 aaatttctttttgttttgcacactctctcttacgtaacaaatgattgtcaa-tttttaaatattgtgcacatctttttaattaatttaagtcaat 358  Q
     ||||  | ||| ||||||||  |||||||  | |||||||| |||||||| |||||||||||||| | |||||||||||||| |||||||||||    
T  16237186 caattcatattttttttgcacgttctctctctcataacaaataattgtcaattttttaaatattgtacgcatctttttaattattttaagtcaat 16237280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 65 - 358
Target Start/End: Complemental strand, 27818064 - 27817766
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaata 164  Q
    ||||||||||||||||  |||| |||||||||||  ||||||   | ||| |||||| |||||||| ||||||||||||||| |||||||||||||||||    
T  27818064 gttcctttttaagtgtttttttagaaaattaacacaaaaataacgatgtgcatttttgcacattttattcctattatacccttattttaatccaccaata 27817965  T
Q  165 tatttctattattttgcacacactttctctttccaataaatttaatatt-----ttatctttctctcgtaacaaacatttgttaattaatatctttttct 259  Q
     ||| ||||| ||||||||||| ||| ||||| |||||||||||||||      |||||||||| | |||||||||| || | | ||| || ||||||||    
T  27817964 aattcctatttttttgcacacattttatcttttcaataaatttaatataatatgttatctttcttttgtaacaaacaattatcagttattaactttttct 27817865  T
Q  260 ccaacaaatttctttttgttttgcacactctctcttacgtaacaaatgattgtcaatttt-taaatattgtgcacatctttttaattaatttaagtcaat 358  Q
    ||||||||||||| ||| |||||| ||||||||||  | |||||||  |||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  27817864 ccaacaaatttctattt-ttttgcgcactctctctatcataacaaacaattgtcaattttctaaatattgtgcacatctttttaattattttaagtcaat 27817766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 67 - 293
Target Start/End: Complemental strand, 297073 - 296848
Alignment:
Q  67 tcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatata 166  Q
    ||||||||||||||| |||| ||| ||||||| ||||||||  ||||||||||||  |||||||||||||| |||||||||||||||  |||||||||||    
T  297073 tcctttttaagtgtcgttttagaatattaacaccaaaatagcgaagtgtatttttgtacattttcttcctactataccctcattttataccaccaatata 296974  T
Q  167 tttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaacaa 266  Q
    |||||||| ||||||||||||||||||||| |||| |||||||||   |||||||| ||| |||||||||||||||| ||| |||||||||  |||||||    
T  296973 tttctatttttttgcacacactttctcttttcaattaatttaatacggtatctttcgctcataacaaacatttgttagttactatcttttttaccaacaa 296874  T
Q  267 atttctttttgttttgcacactctctc 293  Q
    ||| |||||| ||||| ||||||||||    
T  296873 attccttttt-ttttgtacactctctc 296848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 70 - 294
Target Start/End: Complemental strand, 9589380 - 9589154
Alignment:
Q  70 tttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatatat-- 167  Q
    ||||||||||||||||| ||| ||||||| |||||||| ||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||||      
T  9589380 tttttaagtgtcattttagaatattaacaccaaaatagcaaagtgtatttttgcactttttcttcctattgtaccctcattttaatccaccaatatatac 9589281  T
Q  168 -ttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaacaa 266  Q
     |||| || ||||||||| ||||||||||| ||||||||||||||| |||| ||| ||| |||||||||||| ||||  || |||  |||||| ||||||    
T  9589280 cttctttttttttgcacaaactttctcttttcaataaatttaatatgttatttttatcttgtaacaaacattcgttagatattat-gttttctacaacaa 9589182  T
Q  267 atttctttttgttttgcacactctctct 294  Q
    ||| |||||| |||||||||| ||||||    
T  9589181 attccttttttttttgcacacactctct 9589154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 65 - 269
Target Start/End: Complemental strand, 2599683 - 2599479
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaata 164  Q
    ||||||||||||||||| |||| |||||||||||  |||||||  | |||||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  2599683 gttcctttttaagtgtctttttagaaaattaacactaaaatagcgatgtgtatttttgcacattttattcctattataccctcattttaatccaccaata 2599584  T
Q  165 tatttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaac 264  Q
     |||  || | ||||||| || |||| ||||||||||||||||||||| ||||||||||||||||||||||  |||| | ||| |||||||||| |||||    
T  2599583 aattcatacttttttgcagactctttatctttccaataaatttaatatgttatctttctctcgtaacaaaccattgtcagttattatctttttcaccaac 2599484  T
Q  265 aaatt 269  Q
    |||||    
T  2599483 aaatt 2599479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 89 - 276
Target Start/End: Complemental strand, 2094369 - 2094182
Alignment:
Q  89 aaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatatatttctattattttgcacacact 188  Q
    |||||||||| ||||||||| | |||||||||| ||||||||||||||||||||| |||  ||||||||||||||| ||||||||| ||||| |||||||    
T  2094369 aaaattaacaccaaaatagtgatgtgtatttttgcacattttcttcctattatactctcggtttaatccaccaataaatttctatttttttggacacact 2094270  T
Q  189 ttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaacaaatttcttttt 276  Q
    || ||||| ||| ||||||||||| ||||||||||||||||||||| | |||| | ||| |||||||||||||| ||| ||| |||||    
T  2094269 ttatcttttcaaaaaatttaatatgttatctttctctcgtaacaaataattgtcagttattatctttttctccagcaatttttttttt 2094182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 65 - 358
Target Start/End: Original strand, 21933900 - 21934209
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaata 164  Q
    |||| |||||||||||| |||| |||||||  ||| ||||||| ||||||||||||| ||||||||||| | |||||||||||| |||||||||| ||||    
T  21933900 gttcttttttaagtgtcgttttagaaaattttcatgaaaatagcaaagtgtatttttgcacattttcttacgattataccctcaatttaatccactaata 21933999  T
Q  165 tatttctattattttgcacacactttctctttccaataaatttaatattttatctttctc--------------------tcgtaacaaacatttgttaa 244  Q
    ||| |||||| ||| |  |||||||| ||||||||||||||||||||| |||| ||| ||                    |||||||||| ||||||||     
T  21934000 tatctctattttttgg--cacactttatctttccaataaatttaatatgttatatttttctcgtaacattttttttaagatcgtaacaaatatttgttac 21934097  T
Q  245 ttaatatctttttctccaacaaatttctttttgttttgcacactctctcttacgtaacaaatgattgtcaatttt-taaatattgtgcacatctttttaa 343  Q
    ||| ||||||||||||||||||||| |||||| |||||||||||||||||  | |||||||  ||||| |||||| |||||||||||||||||| |||||    
T  21934098 ttattatctttttctccaacaaattccttttt-ttttgcacactctctct--cataacaaacaattgttaattttctaaatattgtgcacatctctttaa 21934194  T
Q  344 ttaatttaagtcaat 358  Q
    |||||||||||||||    
T  21934195 ttaatttaagtcaat 21934209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 65 - 233
Target Start/End: Original strand, 38750451 - 38750618
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaata 164  Q
    ||||||||||||||||| |||| |||||||  ||| ||||||| ||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||    
T  38750451 gttcctttttaagtgtcgttttagaaaattttcatgaaaatagcaaagtgtatttttgcacattttcttcctattatactctcaatttaatccaccaata 38750550  T
Q  165 tatttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaa 233  Q
    ||| | |||| ||| ||||||||||| ||||||||||||||||||||| ||||  || |||||||||||    
T  38750551 tatctttatt-tttggcacacactttatctttccaataaatttaatatgttataattttctcgtaacaa 38750618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 66 - 269
Target Start/End: Complemental strand, 1405509 - 1405302
Alignment:
Q  66 ttcctttttaa-gtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaata 164  Q
    ||||||||||| |||| ||||||||| ||||||| |||| || | |||||||||||| ||| ||| |||||||||||||||| |||||||||||| ||||    
T  1405509 ttcctttttaaagtgttattttggaatattaacaccaaattaatgaagtgtatttttgcacttttacttcctattatacccttattttaatccactaata 1405410  T
Q  165 tatttctattattttg----cacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctc 260  Q
     ||| || || ||||     |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||| ||| | ||||||||||    
T  1405409 aattgctttttttttttcttcacacactatctctttccaataaatttaatatgttatctttctctcgtaacaaacaattgttagttact-tctttttctc 1405311  T
Q  261 caacaaatt 269  Q
    |||||||||    
T  1405310 caacaaatt 1405302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 135 - 358
Target Start/End: Complemental strand, 45667990 - 45667763
Alignment:
Q  135 ctattataccctcattttaatccaccaatatatttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaa 234  Q
    |||||||||| ||||||||||||||||||| |||  |||| | ||||||||||||| ||||| ||||||||||||||| ||||||||||  |||||||||    
T  45667990 ctattataccttcattttaatccaccaataaattcttattttcttgcacacactttatcttttcaataaatttaatatgttatctttcttccgtaacaaa 45667891  T
Q  235 catttgttaattaatatctttttctccaacaaatttctttttgttttgcacactctctct----tacgtaacaaatgattgtcaatttt-taaatattgt 329  Q
    || |||| | ||| ||| ||||||||||||||||| || ||| |||||| |||| |||||    ||   ||||||  |||||||||||| ||||||||||    
T  45667890 caattgtcagttattatatttttctccaacaaattcctattt-ttttgcgcactttctctatcatagcaaacaaacaattgtcaattttctaaatattgt 45667792  T
Q  330 gcacatctttttaattaatttaagtcaat 358  Q
    ||||||||||||||||| |||||||||||    
T  45667791 gcacatctttttaattattttaagtcaat 45667763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 92 - 265
Target Start/End: Complemental strand, 376310 - 376138
Alignment:
Q  92 attaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatatatttctattattttgcacacactttc 191  Q
    |||||||  |||||||  ||||||||||||  |  |||||||||| ||||||| ||||||||||||| |||||||||| |||| ||||||||||||||||    
T  376310 attaacacaaaaatagcgaagtgtattttttaatcttttcttcctgttatacc-tcattttaatccatcaatatatttttatttttttgcacacactttc 376212  T
Q  192 tctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaaca 265  Q
    ||||||||| ||||||||||| |||||||||||| ||||||||||||||||  ||| |||| ||||||||||||    
T  376211 tctttccaacaaatttaatatgttatctttctctggtaacaaacatttgttggttactatccttttctccaaca 376138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 65 - 269
Target Start/End: Complemental strand, 34669304 - 34669099
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttc-ctattataccctcattttaatccaccaat 163  Q
    |||| |||||||||||  ||||||||||||||||| |||||||  | |||||||||| |||||||| ||  ||||||||| |||||||||||||| ||||    
T  34669304 gttcttttttaagtgtttttttggaaaattaacattaaaatagcgatgtgtatttttgcacatttttttttctattatactctcattttaatccatcaat 34669205  T
Q  164 atatttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaa 263  Q
    | ||||||| | ||||||| ||||||| | ||| |||||||||||||||  ||||||||| | |||||| ||| |||| ||||| |||||||| | ||||    
T  34669204 aaatttctacttttttgcagacactttattttttcaataaatttaatatgatatctttcttttgtaacagacagttgtcaattattatcttttacaccaa 34669105  T
Q  264 caaatt 269  Q
    ||||||    
T  34669104 caaatt 34669099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 65 - 346
Target Start/End: Original strand, 45759055 - 45759336
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaa--tagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaa 162  Q
    |||| |||||||||||  |||| ||||||||||||||||   || | | |||||||||   ||||||||||||||||||||||||| |||||||||||||    
T  45759055 gttcatttttaagtgtttttttagaaaattaacatcaaatattaatgatgtgtattttgt-acattttcttcctattataccctcaatttaatccaccaa 45759153  T
Q  163 tatatttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctcca 262  Q
    || ||| ||||| |||| |||||||||| | ||| | ||||||||||||| |||||||||||| || || |||| ||||   ||| ||||||||| ||||    
T  45759154 taaattactatttttttacacacactttattttttccataaatttaatatgttatctttctcttgtgacgaacaattgtcggttattatcttttt-tcca 45759252  T
Q  263 acaaatttctttttgttttgcacactctctcttacgtaacaaatgattgtcaa-tttttaaatattgtgcacatctttttaatta 346  Q
    || |||||| |||| |||||  |||| |||||  | |||||||  ||||| || |||||||||||||||||||| ||||||||||    
T  45759253 acgaatttcatttt-ttttgtgcactttctctcccataacaaacaattgttaattttttaaatattgtgcacatatttttaatta 45759336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 83 - 375
Target Start/End: Complemental strand, 6749548 - 6749267
Alignment:
Q  83 ttttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatatatttctattattttgca 182  Q
    |||||||| |||||||  ||| ||| ||| ||||||||||||||||||||| ||||||||||||| ||||||| |||||||| |||  |||| ||||||     
T  6749548 ttttggaatattaacactaaattagcaaaatgtatttttacacattttctttctattataccctcgttttaatgcaccaataaattcttatt-ttttgcg 6749450  T
Q  183 cacactttctctttc-caataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaacaaatttct-ttttgttt 280  Q
    |||| |||| ||||| ||||||||||||||| |||| ||||||| |||||||||| || ||| ||| ||||| ||||||||||||||| || |||| |||    
T  6749449 cacattttc-ctttctcaataaatttaatatgttatttttctcttgtaacaaacaatttttagttactatctctttctccaacaaattcctatttttttt 6749351  T
Q  281 tgcacactctctcttacgtaacaaatgattgtcaa-tttttaaatattgtgcacatctttttaattaatttaagtcaattttcaatgagtcttcca 375  Q
    |  |||||   ||||||          |||||||| |||||||||| |||||| ||||  ||||||| ||||||||||||| ||||||||||||||    
T  6749350 tagacact---tcttac---------aattgtcaattttttaaatactgtgcaaatctcgttaattattttaagtcaatttccaatgagtcttcca 6749267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 70 - 375
Target Start/End: Original strand, 6472240 - 6472536
Alignment:
Q  70 tttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatatattt 169  Q
    ||||||| | || |||||||| |||||||  ||| ||| ||| |||||||||||||||||| || ||||||||||||| |||||||||||||||| |||     
T  6472240 tttttaattatcgttttggaatattaacactaaattagcaaaatgtatttttacacattttttttctattataccctcgttttaatccaccaataaattc 6472339  T
Q  170 ctattattttgcacacactttctctttc-caataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaacaaat 268  Q
     |||| |||||| |||| |||| ||||| |||||||||||  || |||| ||||||| |||||||||| || ||| ||| ||||| ||||||||| ||||    
T  6472340 ttatt-ttttgcgcacattttc-ctttctcaataaattta--atgttatttttctcttgtaacaaacaatttttagttactatctctttctccaataaat 6472435  T
Q  269 ttct-ttttgttttgcacactctc-tcttacgtaacaaatgattgtcaa-tttttaaatattgtgcacatctttttaattaatttaagtcaattttcaat 365  Q
    | || ||||||||| || || ||| ||||         || |||||||| ||||||||||||||||| ||||  ||||||| ||||||||||||| ||||    
T  6472436 tcctattttgtttttcagacactcttctt---------ataattgtcaattttttaaatattgtgcaaatctcgttaattattttaagtcaatttccaat 6472526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 70 - 226
Target Start/End: Original strand, 37030369 - 37030526
Alignment:
Q  70 tttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtattttta-cacattttcttcctattataccctcattttaatccaccaatatatt 168  Q
    |||||||||||  |||| |||||||||||  |||||    ||||||||||||  ||||||||||||||| ||||||||||||||||||||| |||| |||    
T  37030369 tttttaagtgtttttttagaaaattaacacaaaaatcacgaagtgtattttttgcacattttcttcctagtataccctcattttaatccactaataaatt 37030468  T
Q  169 tctattattttgcacacactttctctttccaataaatttaatattttatctttctctc 226  Q
    || ||| ||||||| ||||||| ||||||||||||||||||||| |||| ||||||||    
T  37030469 tcaattgttttgcaaacactttatctttccaataaatttaatatgttatatttctctc 37030526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 65 - 212
Target Start/End: Original strand, 7259295 - 7259443
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacaca-ttttcttcctattataccctcattttaatccaccaat 163  Q
    ||||||||||||||||| |||| |||  ||||||  ||||||| ||||||||||||| |||| |||| |||||||||||||||||||||||||||| |||    
T  7259295 gttcctttttaagtgtcgttttagaattttaacacaaaaatagcaaagtgtatttttgcacactttttttcctattataccctcattttaatccactaat 7259394  T
Q  164 atatttctattattttgcacacactttctctttccaataaatttaatat 212  Q
    |  ||| |||| |||||||| |||||| ||||||||||||| |||||||    
T  7259395 aattttttatttttttgcacccactttatctttccaataaaattaatat 7259443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 75 - 358
Target Start/End: Complemental strand, 5494235 - 5493955
Alignment:
Q  75 aagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatatatttctatt 174  Q
    ||||||| |||| ||||||||| |  |||||||| | |||||||||| |||||||||||||||||||| ||||| |||| |||||||||| ||| || ||    
T  5494235 aagtgtctttttagaaaattaatacaaaaatagtgatgtgtatttttgcacattttcttcctattatatcctca-tttactccaccaataaattcct-tt 5494138  T
Q  175 attttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaata-tctttttctccaacaaatttctt 273  Q
     |||| | |||||||| |||||  |||||||||||||| |||||||| |||||||||||||| |||| | ||| || | ||||||||||| ||||| ||     
T  5494137 ttttttctcacactttatctttataataaatttaatatgttatctttttctcgtaacaaacaattgtcacttattattttttttctccaataaattccta 5494038  T
Q  274 tttgttttgcacactctctcttacgtaacaaatgattgtcaa-tttttaaatattgtgcacatctttttaattaatttaagtcaat 358  Q
    ||| || ||| | |||||| | |    |||||  ||| |||| |||||| ||| | |||||||||||||||||| |||||||||||    
T  5494037 ttttttgtgcgcgctctctttca---tacaaacaattatcaattttttagatactatgcacatctttttaattattttaagtcaat 5493955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 70 - 253
Target Start/End: Complemental strand, 12568999 - 12568817
Alignment:
Q  70 tttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatatattt 169  Q
    |||||||||||  | |||||| ||||||| ||||||||| |||||||||||| |||||||||||| ||||||||||    |||||||||  |||||||||    
T  12568999 tttttaagtgttctgttggaatattaacaccaaaatagtgaagtgtatttttgcacattttcttcttattataccc----tttaatccatgaatatattt 12568904  T
Q  170 ctattattttgcacacactttctctttcc---aataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatct 253  Q
    | ||| |||| ||||  |||| |||||||   |||||||||||||| |||| ||| ||||||||||||||||||||| ||| |||||    
T  12568903 ccatttttttacacaagctttttctttccaataataaatttaatatattatatttatctcgtaacaaacatttgttagttactatct 12568817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 70 - 253
Target Start/End: Complemental strand, 13545463 - 13545281
Alignment:
Q  70 tttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatatattt 169  Q
    |||||||||||  | |||||| ||||||| ||||||||| |||||||||||| |||||||||||| ||||||||||    |||||||||  |||||||||    
T  13545463 tttttaagtgttctgttggaatattaacaccaaaatagtgaagtgtatttttgcacattttcttcttattataccc----tttaatccatgaatatattt 13545368  T
Q  170 ctattattttgcacacactttctctttcc---aataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatct 253  Q
    | ||| |||| ||||  |||| |||||||   |||||||||||||| |||| ||| ||||||||||||||||||||| ||| |||||    
T  13545367 ccatttttttacacaagctttttctttccaataataaatttaatatattatatttatctcgtaacaaacatttgttagttactatct 13545281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 101 - 237
Target Start/End: Complemental strand, 21916147 - 21916014
Alignment:
Q  101 aaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatatatttctattattttgcacacactttctctttccaa 200  Q
    ||||||||||||| ||||||| ||||||||||||||||   ||| ||| ||||| ||||||||||||| ||||| |||  |||||||||| |||||||||    
T  21916147 aaaatagtaaagtatatttttgcacattttcttcctat---accttcaatttaacccaccaatatattcctattttttgacacacactttatctttccaa 21916051  T
Q  201 taaatttaatattttatctttctctcgtaacaaacat 237  Q
    ||||||||||||||||| ||| ||| |||||||||||    
T  21916050 taaatttaatattttatatttttcttgtaacaaacat 21916014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 70 - 230
Target Start/End: Original strand, 633035 - 633193
Alignment:
Q  70 tttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatatattt 169  Q
    |||||||||||| ||| |||| |||| ||||||| || |||||||||||||| ||||||||||| | ||||||| |||||||||||||||||||| |||     
T  633035 tttttaagtgtcgttt-ggaatattagcatcaaattaataaagtgtatttttccacattttctttcaattatactctcattttaatccaccaataaattc 633133  T
Q  170 ctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaa 230  Q
     || | |||| ||||||||||   |||| |||||||||||||| |||||||||||||||||    
T  633134 ttact-tttttcacacacttttcttttctaataaatttaatatgttatctttctctcgtaa 633193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 127 - 241
Target Start/End: Original strand, 19229316 - 19229429
Alignment:
Q  127 ttttcttcctattataccctcattttaatccaccaatatatttctattattttgcacacactttctctttccaataaatttaatattttatctttctctc 226  Q
    |||||||| |||||||||||||||||||||||| ||||||   ||||| ||||||||| ||||||||||||||||||||||||||| |||| |||||||     
T  19229316 ttttcttcttattataccctcattttaatccactaatatacacctatt-ttttgcacagactttctctttccaataaatttaatatgttatttttctctg 19229414  T
Q  227 gtaacaaacatttgt 241  Q
     ||||||||||||||    
T  19229415 ataacaaacatttgt 19229429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 69 - 234
Target Start/End: Complemental strand, 27264419 - 27264256
Alignment:
Q  69 ctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatatatt 168  Q
    ||||||||||||| ||||  |||||||||| |||| |||    || |||||||  | ||||||||||||||||| ||| ||||||||||||||||| |||    
T  27264419 ctttttaagtgtctttttaaaaaattaacaccaaattagcgttgtttatttttgtatattttcttcctattatatcctaattttaatccaccaataaatt 27264320  T
Q  169 tctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaa 234  Q
     |||||  |||||||||||| | |||||||||||||| |||| |||  ||||||| ||||||||||    
T  27264319 cctatttatttgcacacactatatctttccaataaatctaatgttt--tctttctatcgtaacaaa 27264256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 112 - 358
Target Start/End: Original strand, 42735061 - 42735301
Alignment:
Q  112 gtgtatttttacacattttcttcctattataccctcattttaatccaccaatatatttctattattttgcacacactttctctttccaataaatttaata 211  Q
    ||||||||||  |||||||| | |||||||| ||| ||||||||||| ||||| ||| ||||| ||||||| ||||||| |||||   ||||||||||||    
T  42735061 gtgtatttttgtacattttcgttctattatatcct-attttaatccatcaataaattcctatttttttgcatacactttatctttttgataaatttaata 42735159  T
Q  212 ttttatctttctctcgtaacaaacatttgttaattaatatctttttctccaacaaatttctttttgttttgcacactctctcttacgtaacaaatgattg 311  Q
    | |||| ||| ||||||||||||||  | ||| ||| ||| ||||| || |  ||||| || ||| |||||  ||||||||    |||||||||  ||||    
T  42735160 tgttatttttttctcgtaacaaacaaattttagttattat-tttttttctagtaaattcctattt-ttttgtgcactctct----cgtaacaaagaattg 42735253  T
Q  312 tcaa-tttttaaatattgtgcacatctttttaattaatttaagtcaat 358  Q
    |||| |||||||||||||||||  |||||||||||| |||||||||||    
T  42735254 tcaattttttaaatattgtgcatgtctttttaattattttaagtcaat 42735301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 226 - 358
Target Start/End: Original strand, 38750634 - 38750769
Alignment:
Q  226 cgtaacaaacatttgttaattaatatctttttctccaacaaa--tttctttttgttttgcacactctctcttacgtaacaaatgattgtc-aatttttaa 322  Q
    |||||||||||||||||| ||| |||||||||||||||||||   || ||||| |||||||||||| ||||  | |||||||  |||||| | |||||||    
T  38750634 cgtaacaaacatttgttacttactatctttttctccaacaaaatctttttttttttttgcacactcactctctcataacaaacaattgtctattttttaa 38750733  T
Q  323 atattgtgcacatctttttaattaatttaagtcaat 358  Q
    |||| |||||||||| |||||||||||||| |||||    
T  38750734 atatcgtgcacatctctttaattaatttaaatcaat 38750769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 101 - 212
Target Start/End: Complemental strand, 13779257 - 13779147
Alignment:
Q  101 aaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatatatttctattattttgcacacactttctctttccaa 200  Q
    ||||||| ||||||| |||||  ||||||| ||||||||||||||||||||||||| || ||||  || ||||| |||||||||| |||| |||||||||    
T  13779257 aaaatagcaaagtgtgtttttggacatttt-ttcctattataccctcattttaatctactaataatttcctatttttttgcacaccctttatctttccaa 13779159  T
Q  201 taaatttaatat 212  Q
    ||||||||||||    
T  13779158 taaatttaatat 13779147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 65 - 212
Target Start/End: Original strand, 21959318 - 21959465
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaata 164  Q
    |||| |||||||||||| ||||  ||  ||||||| ||||||   |||||| ||||| ||||  || |||||||||||||||||||||||||||| ||||    
T  21959318 gttcttttttaagtgtcgttttaaaattttaacataaaaataacgaagtgtctttttgcacacctttttcctattataccctcattttaatccactaata 21959417  T
Q  165 tatttctattattttgcacacactttctctttccaataaatttaatat 212  Q
      || ||||| ||||||||||||||| | |||| ||||||| ||||||    
T  21959418 atttcctatttttttgcacacactttatatttctaataaatataatat 21959465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 92 - 270
Target Start/End: Original strand, 34823619 - 34823790
Alignment:
Q  92 attaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatatatttctattattttgcacacactttc 191  Q
    ||||||| |||| |||  ||||||||||||  | ||||||||||||| |||||||| |||||||||||| |||||||  |||| |||| | |||||| ||    
T  34823619 attaacaccaaattagcgaagtgtatttttgtatattttcttcctatcataccctcgttttaatccaccgatatattcttatt-tttttcgcacactatc 34823717  T
Q  192 tctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaacaaattt 270  Q
    | ||||||||||||| ||||| |||| |||||||| ||      |||||||| ||| |||||||| ||| |||||||||    
T  34823718 tttttccaataaattcaatatgttatttttctctctta------atttgttagttactatcttttactcgaacaaattt 34823790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 142 - 246
Target Start/End: Complemental strand, 19578588 - 19578487
Alignment:
Q  142 accctcattttaatccaccaatatatttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgt 241  Q
    ||||||||||||||||| ||||| ||| ||||| ||||   |||| ||||| ||||||||||||| ||||| |||||||||||| |||||||||||||||    
T  19578588 accctcattttaatccaacaataaattcctattttttt---cacaatttctatttccaataaattcaatatgttatctttctcttgtaacaaacatttgt 19578492  T
Q  242 taatt 246  Q
     ||||    
T  19578491 aaatt 19578487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 65 - 210
Target Start/End: Complemental strand, 34824321 - 34824182
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaata 164  Q
    ||||||||||||||||| |||| ||| ||| ||| |||| |||| |||||||||||| ||||||||||| |||| |||||||| ||      ||||||||    
T  34824321 gttcctttttaagtgtcgttttagaatattcacaccaaattagtgaagtgtatttttgcacattttctttctatcataccctcgtt------caccaata 34824228  T
Q  165 tatttctattattttgcacacactttctctttccaataaatttaat 210  Q
    |||| ||||| | || | |||||||||| |||| ||||||||||||    
T  34824227 tattcctattttatttcgcacactttctttttctaataaatttaat 34824182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 227 - 356
Target Start/End: Complemental strand, 21915994 - 21915864
Alignment:
Q  227 gtaacaaacatttgttaattaatatctttttctccaacaaatttct-ttttgttttgcacactctctcttacgtaacaaatgattgtcaattttt--aaa 323  Q
    |||||| |||| ||||| ||||||| ||||||||||| |||||  | |||| ||||| ||||||||| |||  |||||||  ||| |||||||||  |||    
T  21915994 gtaacatacatctgttagttaatatatttttctccaaaaaattcttatttttttttgtacactctctatta--taacaaacaattatcaatttttttaaa 21915897  T
Q  324 tattgtgcacatctttttaattaatttaagtca 356  Q
    |||||||||||||| ||||||||||||||||||    
T  21915896 tattgtgcacatctctttaattaatttaagtca 21915864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 142 - 242
Target Start/End: Complemental strand, 1272772 - 1272671
Alignment:
Q  142 accctcattttaatccaccaatatatttctattatttt-gcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttg 240  Q
    |||| ||||||||||||  |||||||| || || |||| ||||||||  ||||||||||||||||||||||| |||| |||| || ||||||||||||||    
T  1272772 acccacattttaatccagtaatatattccttttttttttgcacacaccctctctttccaataaatttaatatgttatttttcgctggtaacaaacatttg 1272673  T
Q  241 tt 242  Q
    ||    
T  1272672 tt 1272671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 176 - 269
Target Start/End: Original strand, 22722252 - 22722345
Alignment:
Q  176 ttttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaacaaatt 269  Q
    ||||||||||||||| ||||||||||||||||||| | ||||| ||||||| ||||  ||| |||||| ||| | ||||||||| |||||||||    
T  22722252 ttttgcacacactttttctttccaataaatttaatgtgttatcattctctcataacttacaattgttagttactctctttttcttcaacaaatt 22722345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 109 - 211
Target Start/End: Original strand, 25841504 - 25841603
Alignment:
Q  109 aaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatatatttctattattttgcacacactttctctttccaataaattta 208  Q
    ||||||||||||| |||||||| || ||||||||||||||||||||| ||| ||||  || ||||| |||   ||||| ||| |||||||||||||||||    
T  25841504 aaagtgtatttttgcacattttttttctattataccctcattttaattcactaataatttcctatttttt---acacattttatctttccaataaattta 25841600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 132 - 269
Target Start/End: Original strand, 388872 - 389008
Alignment:
Q  132 ttcctattataccctcattttaatccaccaatatatttctattatt-ttgcacacactttctctttccaataaatttaatattttatctttctctcgtaa 230  Q
    ||||||||||||  |||||||||||||| | ||  |||||||| || |||||||||  ||||||||| ||||||||| |  | |||||||||||| ||||    
T  388872 ttcctattatactatcattttaatccactagtaagtttctatttttgttgcacaca--ttctctttctaataaatttgacgtgttatctttctcttgtaa 388969  T
Q  231 caaacatttgttaattaatatctttttctccaacaaatt 269  Q
    |||||| |||||| ||| |||| || ||||  |||||||    
T  388970 caaacaattgttagttactatccttctctcatacaaatt 389008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 39493165 - 39493070
Alignment:
Q  177 tttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaacaaatttct 272  Q
    ||||||||||| || |||||| |||||||||||| | |||||||||| || ||| ||||| || ||| ||| | ||| ||||||||||||||||||    
T  39493165 tttgcacacacattttctttctaataaatttaatgtattatctttctttcataataaacaattattagttactctctctttctccaacaaatttct 39493070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 123 - 276
Target Start/End: Original strand, 20140542 - 20140694
Alignment:
Q  123 cacattttcttcctattataccctcattttaatccaccaatatatttctattatttt-gcacacactttctctttccaataaatttaatattttatcttt 221  Q
    ||||||||| ||||||||||||||||||| | |||||||||| ||| | ||| |||| | ||| | ||| | ||||||||||||||||| | |||||||     
T  20140542 cacattttcatcctattataccctcattt-actccaccaataaattccaattttttttgtacaaaattttt-tttccaataaatttaatgtgttatcttg 20140639  T
Q  222 ctctcgtaacaaacatttgttaattaatatctttttctccaacaaatttcttttt 276  Q
    ||||| ||||||| | |||||||||| | ||| |||| | ||||| ||| |||||    
T  20140640 ctctcctaacaaataattgttaattactctctctttcgcgaacaatttttttttt 20140694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 127 - 243
Target Start/End: Complemental strand, 10618011 - 10617896
Alignment:
Q  127 ttttcttcctattataccctcattttaatccaccaatatatttctattattttgcacacactttctctttccaataaatttaatattttatctttctctc 226  Q
    ||||||||||||||||||||| | ||||||   ||||| ||||||||| ||| ||||||||||||| ||  |||||||| ||||   |||||||| |||     
T  10618011 ttttcttcctattataccctcgtgttaatctgtcaataaatttctattttttggcacacactttct-ttgtcaataaatataatgcgttatctttttctt 10617913  T
Q  227 gtaacaaacatttgtta 243  Q
     ||||||||| ||||||    
T  10617912 ataacaaacaattgtta 10617896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 249 - 358
Target Start/End: Original strand, 37030542 - 37030649
Alignment:
Q  249 tatctttttctccaacaaatttctttttgttttgcacactctctcttacgtaacaaatgattgtcaatttt-taaatattgtgcacatctttttaattaa 347  Q
    ||||||||||||||||||||| || ||| |||| ||  | |||||| |  |||||||  |||||||||||| ||||||||||| ||||||||| |||||     
T  37030542 tatctttttctccaacaaattcctattt-ttttacatgcactctctca--taacaaacaattgtcaattttctaaatattgtgtacatcttttcaattat 37030638  T
Q  348 tttaagtcaat 358  Q
    |||||||||||    
T  37030639 tttaagtcaat 37030649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 143
Target Start/End: Complemental strand, 1273174 - 1273100
Alignment:
Q  69 ctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattatac 143  Q
    ||||||||||||| ||||| ||  |||||||||||| | | |||||||||||| || |||||||||||| |||||    
T  1273174 ctttttaagtgtcgttttgaaattttaacatcaaaacattgaagtgtatttttgcaaattttcttcctaatatac 1273100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 281
Target Start/End: Original strand, 6512106 - 6512181
Alignment:
Q  205 tttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaacaaatttctttttgtttt 281  Q
    |||||||| |||||||||||| |||||||||| || ||| ||| |||| | ||||||||||||||||| ||| ||||    
T  6512106 tttaatatgttatctttctcttgtaacaaacaatttttagttagtatc-tcttctccaacaaatttctatttttttt 6512181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 375
Target Start/End: Original strand, 6512297 - 6512365
Alignment:
Q  308 attgtcaatttt-taaatattgtgcacatctttttaattaatttaagtcaattttcaatgagtcttcca 375  Q
    |||||||||||| ||||||||  ||| |||| |||||||| ||||||||||||| ||||||| ||||||    
T  6512297 attgtcaattttttaaatatttagcaaatctctttaattattttaagtcaatttccaatgagccttcca 6512365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 188 - 247
Target Start/End: Complemental strand, 23272542 - 23272483
Alignment:
Q  188 tttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaatta 247  Q
    ||||| ||| ||||||||||||| |  |||||||||||| ||||||||| ||||||||||    
T  23272542 tttcttttttcaataaatttaatgtgctatctttctctcctaacaaacaattgttaatta 23272483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 142
Target Start/End: Original strand, 5482038 - 5482079
Alignment:
Q  101 aaaatagtaaagtgtatttttacacattttcttcctattata 142  Q
    ||||||| ||||| ||||||| ||||||||||||||||||||    
T  5482038 aaaatagcaaagtttatttttgcacattttcttcctattata 5482079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 188
Target Start/End: Complemental strand, 45885408 - 45885348
Alignment:
Q  127 ttttcttcctattataccctcattttaatccaccaatatatttctattattttgcacacact 188  Q
    |||||||||||||||||| |||||||||||||| |||| |||  | || |||||||||||||    
T  45885408 ttttcttcctattatacc-tcattttaatccacaaataaattaatttttttttgcacacact 45885348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 281
Target Start/End: Original strand, 6512200 - 6512276
Alignment:
Q  205 tttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaacaaatttctttttgtttt 281  Q
    |||||||| |||||||||||| ||||||| || || ||| ||| ||||| ||| | |||||||||||| ||| ||||    
T  6512200 tttaatatgttatctttctcttgtaacaagcaatttttagttactatctcttttttcaacaaatttctatttttttt 6512276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 127; Significance: 2e-65; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 67 - 358
Target Start/End: Original strand, 49299318 - 49299609
Alignment:
Q  67 tcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttccta-ttataccctcattttaatccaccaatat 165  Q
    ||||||||||||||| |||| |||||||||||  |||||||  | |||||||||| ||| |||| |||| | ||||||||||||||||||||| |||||     
T  49299318 tcctttttaagtgtctttttagaaaattaacacaaaaatagcgatgtgtatttttgcacttttttttcccaattataccctcattttaatccatcaataa 49299417  T
Q  166 atttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaaca 265  Q
    ||| ||||| |||||||| |||||| | ||||||||||||||||||| ||||||||| ||||||||||||| |||| | ||| ||||||||| || ||||    
T  49299418 attactatttttttgcactcactttatttttccaataaatttaatatgttatctttcactcgtaacaaacaattgtcagttattatctttttatctaaca 49299517  T
Q  266 aatttctttttgttttgcacactctctcttacgtaacaaatgattgtcaatttt-taaatattgtgcacatctttttaattaatttaagtcaat 358  Q
    |||| |||||| |||||  |||||||||| || |||||||  ||||| |||||| |||||| |||||||||||||||||||| |||||||||||    
T  49299518 aattccttttttttttg--cactctctctcacataacaaacaattgttaattttctaaataatgtgcacatctttttaattattttaagtcaat 49299609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 70 - 358
Target Start/End: Original strand, 54982157 - 54982441
Alignment:
Q  70 tttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatatattt 169  Q
    |||||||||||| |||| ||||||||||||||||||||| | |||||||||| ||| ||||||| ||||||| |||||||||||||||| ||||| ||||    
T  54982157 tttttaagtgtctttttagaaaattaacatcaaaatagtgatgtgtatttttgcacgttttctttctattatgccctcattttaatcca-caataaattt 54982255  T
Q  170 cta-ttattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaacaaat 268  Q
    ||| || ||||||||| ||||| ||||||||||||||| ||||  |||| |||||| ||||||||||| || | | ||| ||||||||||||||||||||    
T  54982256 ctattttttttgcacatactttatctttccaataaattcaataagttatatttctcacgtaacaaacaattatcagttattatctttttctccaacaaat 54982355  T
Q  269 ttctttttgttttgcacactctctcttacgtaacaaatgattgtcaatttt-taaatattgtgcacatctttttaattaatttaagtcaat 358  Q
    | || ||| |||   || ||||||||  | || ||||  ||||| |||||| ||||||||||||||||||||||||||| |||||||||||    
T  54982356 tcctattttttt---acgctctctct--cataccaaacaattgttaattttctaaatattgtgcacatctttttaattattttaagtcaat 54982441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 65 - 269
Target Start/End: Complemental strand, 9808241 - 9808040
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaata 164  Q
    |||||||||||| |||| |||| ||||||||||| ||||||||  | |||||||||| |||||||||||||||||||| |||||||||||||||| ||||    
T  9808241 gttcctttttaaatgtc-ttttagaaaattaacaccaaaatagcgatgtgtattttt-cacattttcttcctattatatcctcattttaatccactaata 9808144  T
Q  165 tatttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaac 264  Q
     ||| ||||| ||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||||||| || | | ||| ||||||||||||||||    
T  9808143 aattcctatt-ttttgcacacactttatctttctaataaatttaatatgttatctttctctcgtaacaaacaattatcagttattatctttttctccaac 9808045  T
Q  265 aaatt 269  Q
    |||||    
T  9808044 aaatt 9808040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 65 - 266
Target Start/End: Complemental strand, 17331042 - 17330842
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaata 164  Q
    ||||||||| ||||||| |||| ||||||||||| |||||||| || |||||||||| |||||||||||||||||||||||| |||||||| || |||||    
T  17331042 gttccttttgaagtgtctttttagaaaattaacaccaaaatagcaatgtgtatttttgcacattttcttcctattataccctaattttaatgcatcaata 17330943  T
Q  165 tatttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaac 264  Q
     ||| ||||| |||| |||||||||| ||||||||||||||||||||| |||| ||||||||| |||||||| |||||  ||| |||||||| |||||||    
T  17330942 aattcctatt-tttttcacacactttatctttccaataaatttaatatattatttttctctcgaaacaaacaattgtttgttattatcttttcctccaac 17330844  T
Q  265 aa 266  Q
    ||    
T  17330843 aa 17330842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 71 - 358
Target Start/End: Original strand, 34031469 - 34031765
Alignment:
Q  71 ttttaagtgtcattttg-gaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatatatt- 168  Q
    ||||||||||| ||||  ||||||||| | ||||||||| | |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||     
T  34031469 ttttaagtgtcttttttagaaaattaagaccaaaatagtgatgtgtatttttgcacattttcttcctattataccctcattttaatccaccaataaattc 34031568  T
Q  169 --tctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaacaa 266  Q
      | | || ||||||||||||||| ||||| ||  |||||||| || |||||||| |||||||||||||| ||||||  |||||||||||| |||||| |    
T  34031569 aatttttttttttgcacacactttatcttttcaggaaatttaacatgttatcttt-tctcgtaacaaacaattgttagataatatctttttatccaacta 34031667  T
Q  267 atttctttttgttttgcaca------ctctctcttacgtaacaaatgattgtcaa-tttttaaatattgtgcacatctttttaattaatttaagtcaat 358  Q
    ||| || ||| |||||| ||      ||||||||  | ||| |||  |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  34031668 attcctattt-ttttgcgcagtctctctctctctctcataataaacaattgtcaattttttaaatattgtgcacatctttttaattaatttaagtcaat 34031765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 65 - 358
Target Start/End: Original strand, 19443042 - 19443323
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaata 164  Q
    ||||||||||||||||| |||| ||||||||| | ||| |||   | || ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  19443042 gttcctttttaagtgtctttttagaaaattaataccaagataacgatgtatatttttgcacattttcttcctattataccctcattttaatccaccaata 19443141  T
Q  165 tatttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaac 264  Q
     |||||||     ||  ||||| ||| ||||||||||||||||||||| |||| ||||| |||||||||||       ||||| ||||||||||||||||    
T  19443142 aatttcta-----tttaacacattttatctttccaataaatttaatatgttatgtttctttcgtaacaaac-------aattattatctttttctccaac 19443229  T
Q  265 aaatttctttttgttttgcacactctctcttacgtaacaaatgattgtcaatttt-taaatattgtgcacatctttttaattaatttaagtcaat 358  Q
    ||| ||||| || |||||| | ||||||||  | |||||||  |||||||||||| ||||||||| ||||||||||||||||| | |||||||||    
T  19443230 aaa-ttcttctttttttgcgctctctctctctcataacaaacaattgtcaattttctaaatattgagcacatctttttaattattgtaagtcaat 19443323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 69 - 318
Target Start/End: Complemental strand, 45666927 - 45666680
Alignment:
Q  69 ctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatatatt 168  Q
    |||| |||||||| ||||  |||||| ||| ||||||||  | |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||    
T  45666927 ctttataagtgtctttttaaaaaattcacaccaaaatagcgatgtgtatttttgcacattttcttcctattataccctcattttaatccaccaataaatt 45666828  T
Q  169 tctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaacaaat 268  Q
     ||||| ||||||||||||||| ||||| ||||||| |||| || |||||  ||||| |||||||||| |||||| ||  ||||||||||||||||||||    
T  45666827 cctatttttttgcacacactttatcttttcaataaaattaacatgttatc--tctcttgtaacaaacaattgttagttgttatctttttctccaacaaat 45666730  T
Q  269 ttctttttgttttgcacactctctcttacgtaacaaatgattgtcaattt 318  Q
    |||| ||| ||||   |||| |||||  | |||||||  |||||||||||    
T  45666729 ttctattttttttatgcactatctctctcctaacaaacaattgtcaattt 45666680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 71 - 247
Target Start/End: Original strand, 24073335 - 24073511
Alignment:
Q  71 ttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatatatttc 170  Q
    ||||||| ||| | || ||||||||||| |||||||| ||||||||||||| ||||||||||||||| ||||| ||| |||||||||||||||| |||||    
T  24073335 ttttaagcgtcttcttagaaaattaacaccaaaatagcaaagtgtatttttgcacattttcttcctaatatactctcgttttaatccaccaataaatttc 24073434  T
Q  171 tattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaatta 247  Q
    ||||  |||||||||||||| ||||| ||||||||||||||| |||| |||||||||||||||||| |||| |||||    
T  24073435 tatttctttgcacacactttatcttttcaataaatttaatatgttatatttctctcgtaacaaacaattgtcaatta 24073511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 65 - 358
Target Start/End: Original strand, 38839893 - 38840184
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaata 164  Q
    ||||||||||||||||  |||   ||| |||||| ||||| ||  | || ||||||| ||||||||||| |||||||||| | |||||||||||||||||    
T  38839893 gttcctttttaagtgttttttaaaaaacttaacaccaaaacagcgatgtatatttttgcacattttctttctattatacc-taattttaatccaccaata 38839991  T
Q  165 tatttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaac 264  Q
     ||||||||| |||||||||||| || ||||||||||||||||||||| |||||||| ||| ||||||||||  ||| | ||| |||||||||||| |||    
T  38839992 aatttctatt-ttttgcacacaccttatctttccaataaatttaatatattatctttttcttgtaacaaacaaatgtcagttattatctttttctcaaac 38840090  T
Q  265 aaatttctttttgttttgcacactctctcttacgtaacaaatgattgtcaattt-ttaaatattgtgcacatctttttaattaatttaagtcaat 358  Q
    ||||| || ||| |||||| |||| |||||  | ||| |||  |||||||||||  ||||||||||| |||||||||| |||| |||||||||||    
T  38840091 aaattcctattt-ttttgcgcactttctctctcataagaaacaattgtcaatttcctaaatattgtgaacatctttttgattattttaagtcaat 38840184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 70 - 358
Target Start/End: Complemental strand, 49263689 - 49263401
Alignment:
Q  70 tttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatatattt 169  Q
    |||||||||||| |||| ||||||||||| ||||||||  |||||||||||| |||||||||||||||||| ||||| |||||||||||| |||| |||     
T  49263689 tttttaagtgtctttttagaaaattaacaccaaaatagcgaagtgtatttttgcacattttcttcctattagaccctgattttaatccactaataaattc 49263590  T
Q  170 ctattatttt--gcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacat--ttgttaattaatatctttttctccaaca 265  Q
    || || ||||   |||||| ||| |||||||||||||||||  || |||| |||||||||||||||| ||  ||||||  || |||||||||||||||||    
T  49263589 cttttttttttctcacacattttatctttccaataaattta--atgttatttttctctcgtaacaaatataattgttagctattatctttttctccaaca 49263492  T
Q  266 aatttctttttgttttgcacactctctcttacgtaacaaatgattgtcaatttt-taaatattgtgcacatctttttaattaatttaagtcaat 358  Q
    || |||| |   ||||| || | ||||||  | || ||||| |||||||||||| ||||||||   | |||||||||||||| |||||||||||    
T  49263491 aaattctat---ttttgtacgcgctctctctcatagcaaataattgtcaattttctaaatattacacgcatctttttaattattttaagtcaat 49263401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 66 - 343
Target Start/End: Original strand, 47943957 - 47944221
Alignment:
Q  66 ttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatat 165  Q
    ||||||| |||||||| ||||  |||||||||| ||||||||  | |||||||||| ||||||||||||||||||||||||||||||||||||||||||     
T  47943957 ttcctttgtaagtgtctttttaaaaaattaacaccaaaatagcgatgtgtatttttgcacattttcttcctattataccctcattttaatccaccaataa 47944056  T
Q  166 atttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaaca 265  Q
    ||| |||     || |||||||||| |||||| |||||||||||||| |||| ||| |||||| | ||||       ||||| ||||||||||| |||||    
T  47944057 attccta-----tttcacacactttatctttctaataaatttaatatgttatgtttatctcgt-ataaac-------aattattatctttttcttcaaca 47944143  T
Q  266 aatttctttttgttttgcacactctctcttacgtaacaaatgattgtcaa-tttttaaatattgtgcacatctttttaa 343  Q
     ||| || ||| |||||| | ||||||||  | |||||||  |||||||| ||||||||||||||||||||||||||||    
T  47944144 cattcctattt-ttttgcgcgctctctctatcataacaaacaattgtcaattttttaaatattgtgcacatctttttaa 47944221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 69 - 243
Target Start/End: Complemental strand, 50721555 - 50721382
Alignment:
Q  69 ctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatatatt 168  Q
    |||||||||| | |||||  |||||||||| |||||||| || || |||||||  ||||||||||||||||||||||| |||| |||| ||||||| |||    
T  50721555 ctttttaagtattattttaaaaaattaacaccaaaatagcaatgtatatttttgtacattttcttcctattatacccttatttcaatctaccaataaatt 50721456  T
Q  169 tctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgtta 243  Q
    | || | ||||||||||||||| |||||||| |||||||||||| ||||||||||||||||||||||| ||||||    
T  50721455 tttagt-ttttgcacacactttatctttccactaaatttaatatgttatctttctctcgtaacaaacaattgtta 50721382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 66 - 239
Target Start/End: Complemental strand, 41503186 - 41503013
Alignment:
Q  66 ttcctttttaagtgtcattttggaaaattaaca-tcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaata 164  Q
    |||||||||||||||||||||  ||||||  ||   ||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  41503186 ttcctttttaagtgtcattttaaaaaatttccacgaaaaatagcaaagtgtatttttgcacattttcttcctattataccctcaatttaatccaccaata 41503087  T
Q  165 tatttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacattt 239  Q
    ||||| |||  ||| ||||||||||| |||||| |||||||||||||| |||| ||| | || ||||||||||||    
T  41503086 tatttatatattttggcacacactttatctttctaataaatttaatatgttatattt-tttcataacaaacattt 41503013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 66 - 358
Target Start/End: Original strand, 1821068 - 1821346
Alignment:
Q  66 ttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaat---ccaccaa 162  Q
    |||||||||||||||| ||||  |||||||||| ||||||||  | |||||||||| |||||||||||||||||||||||||||||||||   |||||||    
T  1821068 ttcctttttaagtgtctttttaaaaaattaacaccaaaatagcgatgtgtatttttgcacattttcttcctattataccctcattttaatccaccaccaa 1821167  T
Q  163 tatatttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctcca 262  Q
    || |||  ||     || |||||||||| ||||||||||||||||||||| |||| ||||||   |||||| |       ||||| ||||||||||||||    
T  1821168 taaattcgta-----tttcacacactttatctttccaataaatttaatatgttatgtttctcctttaacaacc-------aattattatctttttctcca 1821255  T
Q  263 acaaatttctttttgttttgcacactctctcttacgtaacaaatgattgtcaatttt-taaatattgtgcacatctttttaattaatttaagtcaat 358  Q
    ||||||| || ||  |||||| | ||||||    | |||||||  |||||||||||| ||||||||||||||||| ||||||||| | |||||||||    
T  1821256 acaaattcctatt--ttttgcgccctctct----cataacaaacaattgtcaattttataaatattgtgcacatcattttaattattgtaagtcaat 1821346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 83 - 358
Target Start/End: Complemental strand, 53393978 - 53393707
Alignment:
Q  83 ttttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatatatttctattattttgca 182  Q
    |||| |||||||||||  ||| |||  | |||||||||| |||||||||||| |||| ||| || |||||||||||||  || ||| |||||||||||||    
T  53393978 ttttagaaaattaacacaaaactagcgaggtgtatttttgcacattttcttcatattctactcttattttaatccacctttaaattcctattattttgca 53393879  T
Q  183 cacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaacaaatttctttttgttttg 282  Q
    |||||||| ||| | |||||| |||||||| |||| ||| ||| |||| ||||| |||| | ||| |||||||| ||||||||||||  ||||| |||||    
T  53393878 cacactttatctattcaataattttaatatgttatatttttcttgtaataaacaattgtcagttattatctttt-ctccaacaaattcattttttttttg 53393780  T
Q  283 cacactctctcttacgtaacaaatgattgtcaatttt-taaatattgtgcacatctttttaattaatttaagtcaat 358  Q
      |||||||||    ||||||||  ||| ||||| || ||||  ||||||||||||||||||||| |||||||||||    
T  53393779 tgcactctctc----gtaacaaacaattatcaatattctaaactttgtgcacatctttttaattattttaagtcaat 53393707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 65 - 319
Target Start/End: Original strand, 37209540 - 37209796
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaata 164  Q
    ||||||||||||||||| |||| |||||||| || ||||||||  | ||||||||||  ||||||||||||||| |||| || |||||||||| ||||||    
T  37209540 gttcctttttaagtgtctttttagaaaattaccaccaaaatagcgatgtgtatttttgtacattttcttcctatcatactcttattttaatccgccaata 37209639  T
Q  165 tatttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaata------tctttttc 258  Q
     |||  |||| ||||||||||||||| ||||| ||||||||||||||| ||| |||| ||||| |||||||| |||| ||||| ||      | ||||||    
T  37209640 aattcttattcttttgcacacactttatcttttcaataaatttaatatgtta-cttt-tctcggaacaaacaattgtcaattattatacccttatttttc 37209737  T
Q  259 tccaacaaatttctttttgttttgcacactctctcttacgtaacaaatgattgtcaatttt 319  Q
    |||||||||||||| ||  |||||| |||| |||||  | |||||||  ||||||||||||    
T  37209738 tccaacaaatttctatt--ttttgctcactttctctctcataacaaacaattgtcaatttt 37209796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 71 - 253
Target Start/End: Original strand, 53370054 - 53370234
Alignment:
Q  71 ttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatatatttc 170  Q
    |||||| |||| |||| ||| |||||||  |||||| |||||||||||||| ||| |||| ||||||||||||| ||||| ||||| |||||||||||      
T  53370054 ttttaaatgtcgtttttgaatattaacacaaaaataataaagtgtatttttgcaccttttattcctattataccatcattctaatcaaccaatatatt-- 53370151  T
Q  171 tattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatct 253  Q
     || | |||||||| | ||||||||| ||||||||||||||| |||| |||||||||||| |||||||||||| ||| |||||    
T  53370152 cataaatttgcacaaattttctcttttcaataaatttaatatgttatatttctctcgtaataaacatttgttagttactatct 53370234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 65 - 239
Target Start/End: Complemental strand, 33890229 - 33890057
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaata 164  Q
    ||||||||||||||||| ||||  ||||||   |  ||||||  |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  33890229 gttcctttttaagtgtcgttttaaaaaatttctacgaaaataacaaagtgtatttttacatattttcttcctattataccctcaatttaatccaccaata 33890130  T
Q  165 tatttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacattt 239  Q
    ||| |||||| ||||    ||||| | |||||||||||||||||  || |||| ||| |||||||||||||||||    
T  33890129 tatctctattttttttattacactctatctttccaataaattta--atgttatatttttctcgtaacaaacattt 33890057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 113 - 268
Target Start/End: Complemental strand, 46250430 - 46250277
Alignment:
Q  113 tgtatttttacacattttcttcctattataccctcattttaatccaccaatatatttctattattttgcacacactttctctttccaataaatttaatat 212  Q
    |||||||||  || ||| ||| ||||||||| || |||||||||||||||||||||  |||| |||| |||||||||||||||||||||||||| | |||    
T  46250430 tgtatttttgtacctttactttctattatactcttattttaatccaccaatatattcatattttttt-cacacactttctctttccaataaattgagtat 46250332  T
Q  213 tttatctttctctcgtaacaaacatttgttaattaatatctttttctccaacaaat 268  Q
     |||||||| | |||||| ||||| ||||||| || ||||||||||||||||||||    
T  46250331 attatctttttttcgtaagaaacaattgttaa-tactatctttttctccaacaaat 46250277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 71 - 210
Target Start/End: Original strand, 46430403 - 46430542
Alignment:
Q  71 ttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatatatttc 170  Q
    ||||||||||| ||||  |||||||||| |||||||   | ||||||||||  | ||||||||||||||| || |||||||||||| ||||||| |||||    
T  46430403 ttttaagtgtctttttaaaaaattaacaccaaaataacgatgtgtatttttgaatattttcttcctattacactctcattttaatctaccaataaatttc 46430502  T
Q  171 tattattttgcacacactttctctttccaataaatttaat 210  Q
    |||| ||| ||||||||||| |||||||||||||||||||    
T  46430503 tattttttagcacacactttatctttccaataaatttaat 46430542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 65 - 208
Target Start/End: Original strand, 9088741 - 9088884
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaata 164  Q
    |||||||||||||| || |||| ||| |||||||  |||||||  | ||||||| || |||||||||||||||||||||||||||||||||||||||| |    
T  9088741 gttcctttttaagtatctttttagaacattaacactaaaatagcgatgtgtattcttgcacattttcttcctattataccctcattttaatccaccaaaa 9088840  T
Q  165 tatttctattattttgcacacactttctctttccaataaattta 208  Q
     |||  | || ||||||||||||||  | |||||||||||||||    
T  9088841 aattcttttttttttgcacacacttcatttttccaataaattta 9088884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 65 - 212
Target Start/End: Original strand, 38433837 - 38433983
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaata 164  Q
    ||||||||||||||||| ||||  ||  ||||||  |||||||  |||| ||||||| || | ||| |||||||||||||||||||||||||||| ||||    
T  38433837 gttcctttttaagtgtcgttttaaaattttaacacaaaaatagcgaagtatatttttgcaaacttttttcctattataccctcattttaatccactaata 38433936  T
Q  165 tatttctattattttgcacacactttctctttccaataaatttaatat 212  Q
      || ||||| ||||||||||||||| |||||||||||||||||||||    
T  38433937 atttcctatt-ttttgcacacactttatctttccaataaatttaatat 38433983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 65 - 225
Target Start/End: Original strand, 26625584 - 26625740
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaata 164  Q
    ||||||||||||| ||||||||| || ||||||| |||  ||   |||||||||||| |||  || |||||||||||||| | |||||||||    ||||    
T  26625584 gttcctttttaagggtcattttgaaatattaacaccaagttatcgaagtgtatttttgcactcttacttcctattatacctttattttaatc----aata 26625679  T
Q  165 tatttctattattttgcacacactttctctttccaataaatttaatattttatctttctct 225  Q
    ||||  |||| ||||| ||| ||||||||||||||||||||||||||| ||||||||||||    
T  26625680 tattcttatttttttgtacatactttctctttccaataaatttaatatgttatctttctct 26625740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 69 - 341
Target Start/End: Original strand, 38044246 - 38044516
Alignment:
Q  69 ctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatatatt 168  Q
    ||||||||||||  ||||  ||||||||||| ||||||| || |||||||||| |||||||||||| |||| |||  ||||||||||| ||||||| |||    
T  38044246 ctttttaagtgtttttttaaaaaattaacataaaaatagcaatgtgtatttttgcacattttcttcttattgtactttcattttaatcaaccaataaatt 38044345  T
Q  169 tcta---ttattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatat---ctttttctcca 262  Q
    ||||   || ||||||||||||     ||||    | |||||||||| |||| |||||||||||||||||| || | | ||| |||   |||||||||||    
T  38044346 tctattttttttttgcacacac-----cttt----ttaatttaatatgttatatttctctcgtaacaaacacttatgagttagtattaactttttctcca 38044436  T
Q  263 acaaatttctttttgttttgcacactctctcttacgtaacaaatgattgtcaatttt-taaatattgtgcacatcttttt 341  Q
    |||||||  | ||| |||||| || | |||||  ||||| |||  |||||||||||| |||||||| ||||||| |||||    
T  38044437 acaaattcttattttttttgcgcattatctctctcgtaataaacaattgtcaattttctaaatattatgcacattttttt 38044516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 65 - 319
Target Start/End: Complemental strand, 6949641 - 6949402
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaata 164  Q
    ||||||||||||||||  |||| ||||||||||| |||| ||   | ||||||||||  |||||||||||||||||||| |||  |||||||||||||||    
T  6949641 gttcctttttaagtgtatttttagaaaattaacaccaaattaacgatgtgtatttttgtacattttcttcctattatacactctctttaatccaccaata 6949542  T
Q  165 tatttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaac 264  Q
     |||              |||||||| ||||||||||||||||||||| |||||||||  || ||||||||| ||||   |||  |||||||||||||||    
T  6949541 aatt--------------cacactttatctttccaataaatttaatatgttatctttcgttcataacaaacaattgtcggttataatctttttctccaac 6949456  T
Q  265 aaatttctttttgttttgcacactctctcttacgtaacaaatgattgtcaatttt 319  Q
    ||| ||| | || |||||||| ||||||||  | | |||||  ||||||||||||    
T  6949455 aaa-ttcatatttttttgcacgctctctctctcatgacaaacaattgtcaatttt 6949402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 136 - 258
Target Start/End: Complemental strand, 22349493 - 22349374
Alignment:
Q  136 tattataccctcattttaatccaccaatatatttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaac 235  Q
    ||||||||||| ||||||||| |||||||||||||||||  ||  |||||| ||||||||| ||||||||| ||||| ||||||||||||||||| ||||    
T  22349493 tattatacccttattttaatctaccaatatatttctatttgtt--cacacattttctcttttcaataaattaaatatgttatctttctctcgtaa-aaac 22349397  T
Q  236 atttgttaattaatatctttttc 258  Q
    | |||||| ||| ||||| ||||    
T  22349396 aattgttagttactatctatttc 22349374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 65 - 212
Target Start/End: Original strand, 37371016 - 37371166
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtattttt--acacattttcttcctattataccctcattttaatccaccaa 162  Q
    ||||||||||||||||| |||| |||  ||||||  |||||||| ||||||||||||  |||| |||| || |||||||||||||| |||||||||| ||    
T  37371016 gttcctttttaagtgtcgttttagaattttaacacaaaaatagtgaagtgtatttttgaacactttttttttctattataccctcaatttaatccactaa 37371115  T
Q  163 tatatttc-tattattttgcacacactttctctttccaataaatttaatat 212  Q
    ||  || | | || ||||||||||||||| ||||| |||||||||||||||    
T  37371116 taatttacttttttttttgcacacactttatcttttcaataaatttaatat 37371166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 109 - 234
Target Start/End: Complemental strand, 2685201 - 2685076
Alignment:
Q  109 aaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatatatttctattattttgc-acacactttctctttccaataaattt 207  Q
    ||||||||||||| |||||||||||| ||||||| | ||||||||| ||||||||| |||| |||| |||||| | ||||||||||||| ||||||||||    
T  2685201 aaagtgtatttttgcacattttcttcttattatatcttcattttaaaccaccaataaatttttatt-ttttgcgatacactttctcttttcaataaattt 2685103  T
Q  208 aatattttatctttctctcgtaacaaa 234  Q
    ||  | ||||||||||||  |||||||    
T  2685102 aacgtgttatctttctcttataacaaa 2685076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 181 - 358
Target Start/End: Complemental strand, 25494306 - 25494129
Alignment:
Q  181 cacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaacaaatttctttttgttt 280  Q
    |||||||||| | ||| ||||||||||||| ||  |||||  |||| ||||||||| |||| | ||| ||||||||||||||||||||| || ||| |||    
T  25494306 cacacactttatattttcaataaatttaatgtt--atcttcatctcataacaaacaattgtcatttattatctttttctccaacaaattcctattt-ttt 25494210  T
Q  281 tgcacactctctcttacg--taacaaatgattgtcaatttt-taaatattgtgcacatctttttaattaatttaagtcaat 358  Q
    ||| | ||||||||  |   |||||||  |||||||||||| ||||||| ||||||||||||||||||| |||||||||||    
T  25494209 tgctcgctctctctccctcttaacaaacaattgtcaattttctaaatatcgtgcacatctttttaattattttaagtcaat 25494129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 65 - 212
Target Start/End: Original strand, 24537900 - 24538045
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacaca-ttttcttcctattataccctcattttaatccaccaat 163  Q
    ||||||||||||||||| |||| |||  ||||||| |||||||  |||||||||||| |||| |||| ||||||||||| | ||| |||||||||| |||    
T  24537900 gttcctttttaagtgtcgttttagaattttaacataaaaatagcgaagtgtatttttgcacactttttttcctattata-cttca-tttaatccactaat 24537997  T
Q  164 atatttctattattttgcacacactttctctttccaataaatttaatat 212  Q
    |  || ||||| |||| |||||||||| |||||||||||||||||||||    
T  24537998 aatttcctatt-tttttcacacactttatctttccaataaatttaatat 24538045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 70 - 212
Target Start/End: Complemental strand, 55344204 - 55344061
Alignment:
Q  70 tttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcc-tattataccctcattttaatccaccaatatatt 168  Q
    |||||||||||| |||| |||  ||||||  |||||||  || ||||||||| |||||||| || | |||||||||||||||||||||||| ||||  ||    
T  55344204 tttttaagtgtcgttttagaattttaacacaaaaatagcgaaatgtatttttgcacattttttttcatattataccctcattttaatccactaataattt 55344105  T
Q  169 tctattattttgcacacactttctctttccaataaatttaatat 212  Q
     ||||  ||||||||||||||| ||| || ||||||||||||||    
T  55344104 cctatatttttgcacacactttatctgtctaataaatttaatat 55344061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 105 - 267
Target Start/End: Complemental strand, 33809507 - 33809356
Alignment:
Q  105 tagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatatatttctattattttgcacacactttctctttccaataaa 204  Q
    ||||||||| ||||||| ||| |||  || ||| |||||||| |||||||||||||||||||||| || | ||||||||||||||||||               
T  33809507 tagtaaagtatatttttgcacctttattttctaatatacccttattttaatccaccaatatatttttaattttttgcacacactttctc----------- 33809419  T
Q  205 tttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaacaaa 267  Q
    |||| ||| |||| ||| | |||||||||||| |||||| ||| |||||||||||||||||||    
T  33809418 tttactatgttatttttatatcgtaacaaacaattgttagttattatctttttctccaacaaa 33809356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 113 - 221
Target Start/End: Original strand, 46016413 - 46016520
Alignment:
Q  113 tgtatttttacacattttcttcctattataccctcattttaatccaccaatatatttctattattttgcacacactttctctttccaataaatttaatat 212  Q
    |||||||||  || ||| ||| ||||||||| || |||||||||||||||||||||  |||| |||| |||||||||||||||||||||||||| | |||    
T  46016413 tgtatttttgtacctttactttctattatactcttattttaatccaccaatatattcatattttttt-cacacactttctctttccaataaattgagtat 46016511  T
Q  213 tttatcttt 221  Q
     ||||||||    
T  46016512 attatcttt 46016520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 127 - 210
Target Start/End: Original strand, 31104810 - 31104893
Alignment:
Q  127 ttttcttcctattataccctcattttaatccaccaatatatttctattattttgcacacactttctctttccaataaatttaat 210  Q
    |||||||||||||||||||||||||||||| |  |||| |||||||   |||||||||||||||| |||| |||||||||||||    
T  31104810 ttttcttcctattataccctcattttaatcaaggaataaatttctaactttttgcacacactttcacttttcaataaatttaat 31104893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 138 - 276
Target Start/End: Complemental strand, 20782995 - 20782857
Alignment:
Q  138 ttataccctcattttaatccaccaatatatttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacat 237  Q
    ||||||||||||||||||||||||||| | |  |||| || | |||||| ||||||||| ||||||||||||||| |||| | ||||||  ||||||||     
T  20782995 ttataccctcattttaatccaccaataaaatcatatttttctacacacattttctcttttcaataaatttaatatgttatatgtctctcaaaacaaacaa 20782896  T
Q  238 ttgttaattaatatctttttctccaacaaatttcttttt 276  Q
     | ||  ||||||||  ||||||||| ||||| ||||||    
T  20782895 atttttgttaatatccatttctccaataaattccttttt 20782857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 200 - 358
Target Start/End: Original strand, 9089141 - 9089300
Alignment:
Q  200 ataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaacaaatttctttttgttttgcacactctctcttacgt 299  Q
    ||||||||||||| ||||  ||||||||||||||| | ||||   ||| ||||||||||||||||||||| ||  || ||||||||  |||||||  | |    
T  9089141 ataaatttaatatgttatagttctctcgtaacaaataattgtcggttattatctttttctccaacaaattcctactt-ttttgcacgttctctctctcat 9089239  T
Q  300 aacaaatgattgtcaattttt--aaatattgtgcacatctttttaattaatttaagtcaat 358  Q
    ||||||  | |||||||||||  |||||||| |||||| ||||||||||  ||||||||||    
T  9089240 aacaaacaactgtcaattttttaaaatattgggcacatatttttaattatcttaagtcaat 9089300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 214 - 269
Target Start/End: Complemental strand, 30912882 - 30912827
Alignment:
Q  214 ttatctttctctcgtaacaaacatttgttaattaatatctttttctccaacaaatt 269  Q
    |||| ||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  30912882 ttatttttctctcgtaacaaacatttgttagttactatctttttctccaacaaatt 30912827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 225 - 358
Target Start/End: Complemental strand, 41503002 - 41502877
Alignment:
Q  225 tcgtaacaaacatttgttaattaatatctttttctccaacaaatttctttttgttttgcacactctctcttacgtaacaaatgattgtcaatttt-taaa 323  Q
    ||||||||||||||||||| ||| ||||||||||||||||||       ||| |||| |||||||  |||  | |||||||  ||||||||||||  |||    
T  41503002 tcgtaacaaacatttgttacttactatctttttctccaacaa-------ttttttttacacactccttct--cataacaaacaattgtcaattttcgaaa 41502912  T
Q  324 tattgtgcacatctttttaattaatttaagtcaat 358  Q
    ||||||||||| || ||||||||||||||||||||    
T  41502911 tattgtgcacaactctttaattaatttaagtcaat 41502877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 299 - 358
Target Start/End: Complemental strand, 50721368 - 50721308
Alignment:
Q  299 taacaaatgattgtcaattttta-aatattgtgcacatctttttaattaatttaagtcaat 358  Q
    |||||||| |||||||||||||  |||||||| |||||||||||||||| |||||||||||    
T  50721368 taacaaataattgtcaatttttttaatattgtacacatctttttaattattttaagtcaat 50721308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 58
Target Start/End: Complemental strand, 2905259 - 2905216
Alignment:
Q  15 cacagacacagaaaaattgcaatcaacaagaattaaaattatga 58  Q
    |||| |||||||||||||||||||||||| ||||||||||||||    
T  2905259 cacaaacacagaaaaattgcaatcaacaacaattaaaattatga 2905216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 75 - 144
Target Start/End: Complemental strand, 46196595 - 46196526
Alignment:
Q  75 aagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattatacc 144  Q
    ||||||| ||||  |||||||||| ||||||||  | |||||||||| || |||||||||||||||||||    
T  46196595 aagtgtctttttataaaattaacaccaaaatagcgaggtgtatttttgcatattttcttcctattatacc 46196526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 352
Target Start/End: Complemental strand, 2493562 - 2493508
Alignment:
Q  299 taacaaatgattgtcaattttt-aaatattgtgcacatctttttaattaatttaa 352  Q
    |||||||  ||||||||||||| ||||||| |||||||||||||||||| |||||    
T  2493562 taacaaacaattgtcaattttttaaatattatgcacatctttttaattattttaa 2493508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 324 - 358
Target Start/End: Complemental strand, 33889954 - 33889920
Alignment:
Q  324 tattgtgcacatctttttaattaatttaagtcaat 358  Q
    |||||||||||||| ||||||||||||||||||||    
T  33889954 tattgtgcacatctctttaattaatttaagtcaat 33889920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 358
Target Start/End: Original strand, 24073751 - 24073819
Alignment:
Q  290 tctcttacgtaacaaatgattgtcaatttt-taaatattgtgcacatctttttaattaatttaagtcaat 358  Q
    |||||| | |||||||  |||||||||||| |||||||| |||||||| ||||||||| |||||||||||    
T  24073751 tctctttcataacaaacaattgtcaattttctaaatattttgcacatc-ttttaattattttaagtcaat 24073819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 148
Target Start/End: Complemental strand, 25494370 - 25494305
Alignment:
Q  83 ttttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctca 148  Q
    |||| ||||||||||| |||| |||  | ||| |||||| |||||| |||||||||||||||||||    
T  25494370 ttttagaaaattaacaccaaattagcgatgtgcatttttgcacattgtcttcctattataccctca 25494305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 154
Target Start/End: Original strand, 23674124 - 23674208
Alignment:
Q  70 tttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaa 154  Q
    |||||||||||| ||||| || |  ||||  ||| ||| ||||||||||||| |||| || |||| ||||||||||| |||||||    
T  23674124 tttttaagtgtcgttttgaaatagcaacactaaattagaaaagtgtatttttgcacacttccttcatattatacccttattttaa 23674208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 124; Significance: 1e-63; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 118 - 358
Target Start/End: Original strand, 2437273 - 2437510
Alignment:
Q  118 ttttacacattttcttcctattataccctcattttaatccaccaatatatttctattattttgcacacactttctctttccaataaatttaatattttat 217  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||| ||| ||||| ||||||||||||||| ||||||||||||||||||||| ||||    
T  2437273 ttttgcacattttcttcctattataccatcattttaatccaccaataaattcctatttttttgcacacactttatctttccaataaatttaatatgttat 2437372  T
Q  218 ctttctctcgtaacaaacatttgttaattaatatctttttctccaacaaatttctttttgttttgcacactctctcttacgtaacaaatgattgtcaatt 317  Q
    || |||||| ||||||||  |||| ||||| ||||||||||| |||||||||  ||| | |||||| | ||||||||||  |||||||  ||||||||||    
T  2437373 ctatctctcataacaaactattgtcaattattatctttttcttcaacaaatt--tttattttttgcgcgctctctctta--taacaaacaattgtcaatt 2437468  T
Q  318 tt-taaatattgtgcacatctttttaattaatttaagtcaat 358  Q
    || ||||||||||||| ||||||||||||| |||||||||||    
T  2437469 ttctaaatattgtgcaaatctttttaattattttaagtcaat 2437510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 115 - 354
Target Start/End: Complemental strand, 23411107 - 23410868
Alignment:
Q  115 tatttttacacattttcttcctattataccctcattttaatccaccaatatatttctattattttgcacacactttctctttccaataaatttaatattt 214  Q
    ||||||| ||| ||||  |||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||| |    
T  23411107 tatttttgcactttttgatcctattataccctcattttaatccaccaatatattcctatttttttgcatacactttctctttccaataaatttaatatgt 23411008  T
Q  215 tatctttctctcgtaacaaacatttgttaattaatatctttttctccaacaaatttctttttgttttgcacac--tctctcttacgtaacaaatgattgt 312  Q
    |||||||||||||||||||| |||| ||| ||| ||||||||||||||||||||| |||||| ||||||||||  | |||||  | || ||||  |||||    
T  23411007 tatctttctctcgtaacaaatatttcttagttactatctttttctccaacaaattccttttt-ttttgcacacattttctctctcatagcaaacaattgt 23410909  T
Q  313 caat-ttttaaatattgtgcacatctttttaattaatttaagt 354  Q
    |||| ||||||||||  ||||||||| ||||||||||| ||||    
T  23410908 caatattttaaatat--tgcacatctctttaattaattgaagt 23410868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 70 - 270
Target Start/End: Original strand, 14093211 - 14093410
Alignment:
Q  70 tttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatatattt 169  Q
    ||||||||| || |||| |||| |||||| |||| ||| || |||||||||| |||||||||||||||||||||||||||||||||||| ||||| | ||    
T  14093211 tttttaagtatc-ttttagaaagttaacaccaaattagcaatgtgtatttttgcacattttcttcctattataccctcattttaatccatcaataaactt 14093309  T
Q  170 ctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaacaaatt 269  Q
    ||||| ||||||||||||||| || |||||||||||||||||| | ||||||||||||||||||||| ||||   ||| ||||||||||| |||||||||    
T  14093310 ctatttttttgcacacactttatccttccaataaatttaatatgtcatctttctctcgtaacaaacaattgtcggttattatctttttctacaacaaatt 14093409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 65 - 269
Target Start/End: Complemental strand, 8049985 - 8049779
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaata 164  Q
    ||||||||||| ||||| ||||  |||||||||| ||||||||  | |||| ||||| |||||||||||||||||||||||||||||| |||||||||||    
T  8049985 gttcctttttatgtgtctttttaaaaaattaacaccaaaatagcgatgtgtgtttttgcacattttcttcctattataccctcattttgatccaccaata 8049886  T
Q  165 tatttctattatttt--gcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctcca 262  Q
     |||  |||| ||||  ||||||||||| | ||||||||||||||||||| ||||||||||||| ||||||||| |||||| ||| ||||||||||||||    
T  8049885 aattcttatttttttttgcacacactttatatttccaataaatttaatatgttatctttctctcataacaaacaattgttacttattatctttttctcca 8049786  T
Q  263 acaaatt 269  Q
     ||||||    
T  8049785 tcaaatt 8049779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 65 - 239
Target Start/End: Original strand, 26252004 - 26252177
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaata 164  Q
    ||||||||||||||||| |||| |||||||  ||| |||||||||||||||||||||  ||||||||||||||||||||||||| |||||| ||||||||    
T  26252004 gttcctttttaagtgtcgttttagaaaatttccatgaaaatagtaaagtgtatttttgtacattttcttcctattataccctcaatttaat-caccaata 26252102  T
Q  165 tatttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacattt 239  Q
    ||| |||||| ||| ||||||||||| |||||| |||||||||||||| |||| ||| |||||||||||||||||    
T  26252103 tatctctattttttggcacacactttatctttctaataaatttaatatgttatatttttctcgtaacaaacattt 26252177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 65 - 358
Target Start/End: Complemental strand, 25057189 - 25056899
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaata 164  Q
    |||| |||||||||||| ||||  ||||||||||||||||||   | | ||||||||| ||||||||||||||||||||| ||| ||||||||| |||||    
T  25057189 gttcatttttaagtgtctttttaaaaaattaacatcaaaataacgatgggtatttttatacattttcttcctattataccttcaatttaatccatcaata 25057090  T
Q  165 tatttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaac 264  Q
     |||  |||| ||||||||||||||| ||||||||||||||||||| | ||||||||||||| ||||||||| ||| |  ||| ||| |||||||| |||    
T  25057089 aattcttatt-ttttgcacacactttatctttccaataaatttaatgtgttatctttctctcataacaaacagttg-tggttattatatttttctctaac 25056992  T
Q  265 aaatttctttttgttttgcacactctctcttacgtaacaaatgattgtcaa-tttttaaatattgtgcacatctttttaattaatttaagtcaat 358  Q
    ||||| | |||| |||| |   ||||||||||  ||||||   |||||||| |||||||||||| ||||||  |||||||||| |||||||||||    
T  25056991 aaattccgttttttttttcgttctctctctta--taacaagcaattgtcaattttttaaatattatgcacacatttttaattattttaagtcaat 25056899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 65 - 208
Target Start/End: Complemental strand, 6026664 - 6026522
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaata 164  Q
    ||||||||||||||||| |||| ||| |||||||  ||||||| ||||||||| ||| ||| ||||||| ||||||||| ||||||||||||||| ||||    
T  6026664 gttcctttttaagtgtcgttttagaatattaacacaaaaatagcaaagtgtatgtttgcactttttctttctattatactctcattttaatccacgaata 6026565  T
Q  165 tatttctattattttgcacacactttctctttccaataaattta 208  Q
    ||||  |||| |||| ||||||||||||||||||||||||||||    
T  6026564 tattcatatt-ttttacacacactttctctttccaataaattta 6026522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 113 - 286
Target Start/End: Complemental strand, 31661027 - 31660855
Alignment:
Q  113 tgtatttttacacattttcttcctattataccctcattttaatccaccaatatatttctattattttgcacacactttctctttccaataaatttaatat 212  Q
    |||||||| ||| ||||||||||||||||||| ||||||||||| ||||||  ||| ||||  || || ||||||||||||||||||||||||||||| |    
T  31661027 tgtattttaacatattttcttcctattataccttcattttaatctaccaattgattcctatctttctggacacactttctctttccaataaatttaatgt 31660928  T
Q  213 tttatctttctctcgtaacaaacatttgttaattaatatctttttctccaacaaatttctttttgttttgcaca 286  Q
     ||||||||||||| || |||||| | |||| ||| | ||||||||| ||||||| |||||||| |||| ||||    
T  31660927 gttatctttctctcatagcaaacaatcgttagttactctctttttcttcaacaaa-ttcttttttttttccaca 31660855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 69 - 236
Target Start/End: Complemental strand, 31656209 - 31656042
Alignment:
Q  69 ctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatatatt 168  Q
    ||||| |||||||||||||||| | ||||| |||| ||  |||||||||||| |||||||||||| |||||||||||||||||||||  ||||||| |||    
T  31656209 cttttcaagtgtcattttggaatagtaacaccaaattaagaaagtgtattttaacacattttctttctattataccctcattttaatttaccaatagatt 31656110  T
Q  169 tctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaaca 236  Q
      |||| || || |||||  |||||||| ||||||||||||| | |||| |||||||| |||||||||    
T  31656109 catatttttctggacacatgttctcttttcaataaatttaatgtgttatatttctctcataacaaaca 31656042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 194 - 358
Target Start/End: Complemental strand, 8049751 - 8049583
Alignment:
Q  194 tttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaacaaatt--tctttttgttttgcacactctc 291  Q
    ||||||||||||||||||| ||||||||||||| ||||||||| |||||  ||| |||||||||||||||||||||  | ||||| || ||  | |||||    
T  8049751 tttccaataaatttaatatgttatctttctctcataacaaacaattgttgcttattatctttttctccaacaaattcatattttttttgtgtgctctctc 8049652  T
Q  292 tcttacgtaacaaatgattgtcaa--tttttaaatattgtgcacatctttttaattaatttaagtcaat 358  Q
    |||  | |||||||  ||||||||  |||||||||||||||||| |||||||||||| |||||||||||    
T  8049651 tctctcataacaaacaattgtcaatttttttaaatattgtgcacctctttttaattattttaagtcaat 8049583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 78 - 278
Target Start/End: Complemental strand, 8461309 - 8461114
Alignment:
Q  78 tgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccacca--atatatttctatta 175  Q
    ||||||||| ||| |||||||| ||||||| |||||||||||||  ||||||| ||||| || |||||| |||||||||||| |  |||||||||| |      
T  8461309 tgtcattttagaatattaacataaaaatagcaaagtgtatttttgtacatttttttcctgttttaccctaattttaatccactaatatatatttctgtat 8461210  T
Q  176 ttttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaacaaatttctttt 275  Q
    ||||||||||| ||||||||| ||||||||||    ||||   |||||||| ||| |||||||||||| ||| ||| ||||||||||||||||| || ||    
T  8461209 ttttgcacacattttctctttgcaataaattt----tttt---tttctctcataataaacatttgttagttactatatttttctccaacaaattcctatt 8461117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 109 - 248
Target Start/End: Original strand, 6110662 - 6110801
Alignment:
Q  109 aaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatatatttctattattttgcacacactttctctttccaataaattta 208  Q
    ||||||||||||||||||||||||| |||||||||  |||||||||||||| |||  |||  |||| | ||||||||||||||  ||| |||||||||||    
T  6110662 aaagtgtatttttacacattttctttctattatactttcattttaatccactaatgaattattattttcttgcacacactttccgttttcaataaattta 6110761  T
Q  209 atattttatctttctctcgtaacaaacatttgttaattaa 248  Q
    |||| | |||||||||| |||||||||| |||||| ||||    
T  6110762 atatgtcatctttctcttgtaacaaacaattgttagttaa 6110801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 65 - 212
Target Start/End: Original strand, 21526915 - 21527062
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaa-tagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaat 163  Q
    ||||||||||||||||| |||| |||  |||| ||||||| |||  |||||||||||| |||| ||| ||||||||| |||||||||||||||||| |||    
T  21526915 gttcctttttaagtgtcgttttagaattttaa-atcaaaaatagcgaagtgtatttttgcacacttttttcctattacaccctcattttaatccactaat 21527013  T
Q  164 atatttctattattttgcacacactttctctttccaataaatttaatat 212  Q
    |  || ||||| ||||||||||||||| ||||| |||||||||||||||    
T  21527014 aatttcctatttttttgcacacactttatcttttcaataaatttaatat 21527062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 135 - 351
Target Start/End: Complemental strand, 9353706 - 9353493
Alignment:
Q  135 ctattataccctcattttaatccaccaatatatttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaa 234  Q
    |||||||||||||||||||| |||||||||  || ||||| ||| | |||||| || |||||  |||||||||||||| ||||||||||| ||||||  |    
T  9353706 ctattataccctcattttaa-ccaccaataagttcctattttttcg-acacacattatctttaaaataaatttaatatattatctttctcccgtaac--a 9353611  T
Q  235 catttgttaattaatatctttttctccaacaaatttctttttgttttgcacactctctcttacgtaacaaatgattgtcaatttt-taaatattgtgcac 333  Q
    ||||| | | ||| || ||||||||| ||||| || |||||| |||||||| ||||||||  | || ||||  |||||||||||| |||||||||||||     
T  9353610 catttttcatttattacctttttctcgaacaacttccttttttttttgcacgctctctctctcatatcaaacaattgtcaattttctaaatattgtgcat 9353511  T
Q  334 atctttttaattaattta 351  Q
    || |||||||||| ||||    
T  9353510 atttttttaattatttta 9353493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 69 - 212
Target Start/End: Original strand, 7972257 - 7972400
Alignment:
Q  69 ctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatatatt 168  Q
    ||||||||||| | |||| |||  ||||||  ||||||   |||||||||||| |||| ||| || ||||||||||||||||||||||||| ||||  ||    
T  7972257 ctttttaagtgacgttttagaattttaacacaaaaataacgaagtgtatttttgcacactttttttctattataccctcattttaatccactaataattt 7972356  T
Q  169 tctattattttgcacacactttctctttccaataaatttaatat 212  Q
     ||||| ||||||||||| ||| |||||||||||||||||||||    
T  7972357 cctatttttttgcacacattttatctttccaataaatttaatat 7972400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 301 - 372
Target Start/End: Original strand, 6110832 - 6110903
Alignment:
Q  301 acaaatgattgtcaatttttaaa-tattgtgcacatctttttaattaatttaagtcaattttcaatgagtctt 372  Q
    |||||| ||| |||||||||||| |||||||||||||| ||||||| ||||||||||||||  ||||||||||    
T  6110832 acaaataattttcaatttttaaaatattgtgcacatctctttaatt-atttaagtcaatttaaaatgagtctt 6110903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 314 - 358
Target Start/End: Original strand, 14093406 - 14093450
Alignment:
Q  314 aatttttaaatattgtgcacatctttttaattaatttaagtcaat 358  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||    
T  14093406 aattttttaatattgtgcacatctttttaattattttaagtcaat 14093450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 132 - 236
Target Start/End: Original strand, 31871454 - 31871557
Alignment:
Q  132 ttcctattataccctcattttaatccaccaatatatttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaac 231  Q
    |||||||| ||||||| ||||||||||| |||| ||||||||| |||| || ||||||| |||||  |||| |||||||   |||| |||||||| ||||    
T  31871454 ttcctattgtaccctctttttaatccactaataaatttctatt-ttttacaaacactttatcttttaaatagatttaatgggttatttttctctcataac 31871552  T
Q  232 aaaca 236  Q
    |||||    
T  31871553 aaaca 31871557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 132 - 231
Target Start/End: Original strand, 21013160 - 21013257
Alignment:
Q  132 ttcctattataccctcattttaatccaccaatatatttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaac 231  Q
    |||||||||||||||| ||| |||||||||||  |||| |||| ||||||||| | ||| ||| |||||||||||| || | ||||||||||||| ||||    
T  21013160 ttcctattataccctcgttt-aatccaccaatcaatttttatt-ttttgcacaaaatttatctctccaataaatttcatgtgttatctttctctcataac 21013257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 4123175 - 4123131
Alignment:
Q  192 tctttccaataaatttaatattttatctttctctcgtaacaaaca 236  Q
    ||||||||||||||||||| | ||||||||||||| |||||||||    
T  4123175 tctttccaataaatttaatgtgttatctttctctcataacaaaca 4123131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 174
Target Start/End: Original strand, 34132030 - 34132079
Alignment:
Q  125 cattttcttcctattataccctcattttaatccaccaatatatttctatt 174  Q
    ||||||||||||||| |||| | |||||||||||| |||| |||||||||    
T  34132030 cattttcttcctattttaccattattttaatccactaataaatttctatt 34132079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 247
Target Start/End: Complemental strand, 9103166 - 9103067
Alignment:
Q  150 tttaatccaccaatatatttctattatttt--gcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaatta 247  Q
    |||||||||||| || ||||||||| ||||  |||||||||  || ||| |||||||||| || | |||||||| |||| ||||||| | ||||| ||||    
T  9103166 tttaatccaccattaaatttctatttttttttgcacacactcactattttcaataaatttgatgtgttatctttttctcataacaaataattgtttatta 9103067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 124; Significance: 1e-63; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 65 - 358
Target Start/End: Original strand, 13254142 - 13254439
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaata 164  Q
    ||||||||||||| ||  |||| ||||||||||||||||||||  | |||||||||| |||||||||||| |||||| | |||||||||||||| |||||    
T  13254142 gttcctttttaagcgtttttttagaaaattaacatcaaaatagcgatgtgtatttttgcacattttcttcatattatgctctcattttaatccatcaata 13254241  T
Q  165 tatttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaac 264  Q
     ||| ||||| |||| |||||||| | ||||||||||||||||||||| |||| |||||||||||||||||| |||| | ||  |||||||||||||||     
T  13254242 aattcctattttttttcacacactatatctttccaataaatttaatatgttatttttctctcgtaacaaacaattgtcagtttttatctttttctccaaa 13254341  T
Q  265 aaat---ttctttttgttttgcacactctctcttacgtaacaaatgattgtcaa-tttttaaatattgtgcacatctttttaattaatttaagtcaat 358  Q
    ||||   || ||||| |||||| | ||||||||  | |||||||  |||||||| |||||||||||| ||| |||||||||||||| |||||||||||    
T  13254342 aaattcctttttttttttttgcgcgctctctctctcataacaaacaattgtcaattttttaaatattatgcgcatctttttaattattttaagtcaat 13254439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 70 - 319
Target Start/End: Complemental strand, 41117608 - 41117359
Alignment:
Q  70 tttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatatattt 169  Q
    |||||||||||| |||| ||||||||||| |||| |||  | |||||||||| ||  |||| || |||||||||||||||||||||||||||||| ||||    
T  41117608 tttttaagtgtctttttagaaaattaacaccaaactagcgatgtgtatttttgcattttttttttctattataccctcattttaatccaccaataaattt 41117509  T
Q  170 ctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaacaaatt 269  Q
     |||| ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||   || | ||| ||||||||||| |||||||||    
T  41117508 ttatttttttgcacacactttatctttccaataaatttaatatgttatctttctctcgtaacaaacaaacgtcacttattatctttttcttcaacaaatt 41117409  T
Q  270 tctttttgttttgcacactctctcttacgtaacaaatgattgtcaatttt 319  Q
     || ||| |||| |||||| |||||  | |||||||  ||||||||||||    
T  41117408 cctattttttttccacactttctctctcataacaaacaattgtcaatttt 41117359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 65 - 328
Target Start/End: Original strand, 6295187 - 6295452
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaata 164  Q
    |||||||||||| |||| |||| |||||||||||  |||||||  | |||||||||| ||||||||||| ||||||||||||||| ||| ||||||||||    
T  6295187 gttcctttttaaatgtctttttagaaaattaacactaaaatagcgatgtgtatttttgcacattttctttctattataccctcatgttactccaccaata 6295286  T
Q  165 tatttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaac 264  Q
     ||||||||| |||| |||||| ||| |||||| || ||||||||||| ||||||||||||||||||||||| ||||   ||| ||| ||||||||||||    
T  6295287 aatttctatttttttacacacattttatctttctaaaaaatttaatatgttatctttctctcgtaacaaacaattgtcggttattatttttttctccaac 6295386  T
Q  265 aaatttct-ttttgttttgcacactctctcttacgtaacaaatgattgtcaatttt-taaatattg 328  Q
    |||||||| |||| ||  || | ||||||||  | |||||||| |||||||||||| |||||||||    
T  6295387 aaatttctgtttttttgcgcgctctctctctctcataacaaataattgtcaattttctaaatattg 6295452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 66 - 358
Target Start/End: Complemental strand, 32769618 - 32769315
Alignment:
Q  66 ttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatat 165  Q
    |||||||||||||||| |||| |||||||  ||  ||||||| ||| | ||||||| |||||||||||||||||||| ||||| ||||||||||||||||    
T  32769618 ttcctttttaagtgtcgttttagaaaattttcacgaaaatagcaaattttattttttcacattttcttcctattatatcctcaatttaatccaccaatat 32769519  T
Q  166 atttctattatttt-gcacacactttctctttccaataaatttaatattttatctttct-------------ctcgtaacaaacatttgttaattaatat 251  Q
    || |||||| |||| ||||||||||| ||||||||||||||||||||| |||| ||| |               | |||||||||||||||| ||| |||    
T  32769518 atctctatttttttggcacacactttatctttccaataaatttaatatgttatattttttccataacataagaccataacaaacatttgttacttactat 32769419  T
Q  252 ctttttctccaacaaatttctttttgttttgcacactctctcttacgtaacaaatgattgtcaa-tttttaaatattgtgcacatctttttaattaattt 350  Q
    ||||||||||||||||||  ||||| |||||||||||||||||  | |||||||| |||||||| |||||||||||  ||||||||| ||||||||||||    
T  32769418 ctttttctccaacaaattctttttttttttgcacactctctct--cataacaaataattgtcaattttttaaatat--tgcacatctctttaattaattt 32769323  T
Q  351 aagtcaat 358  Q
    ||||||||    
T  32769322 aagtcaat 32769315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 75 - 293
Target Start/End: Original strand, 4395534 - 4395753
Alignment:
Q  75 aagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatatatttctatt 174  Q
    ||||||| ||||||||  ||||||  |||||||  |||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||| |||||    
T  4395534 aagtgtcgttttggaattttaacacaaaaatagcgaagtgtattttttcaccttttcttcctattataccatcattttaatccaccaatatattcctatt 4395633  T
Q  175 attttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaacaaatttc--- 271  Q
     || | | ||||||||||||||||||||||||||  |||||||||||| |||||||||||| ||||||  ||| |||||||||||||||||||||||       
T  4395634 tttctacgcacactttctctttccaataaattta--attttatctttccctcgtaacaaacttttgttggttactatctttttctccaacaaatttcaaa 4395731  T
Q  272 tttttgttttgcacactctctc 293  Q
    ||||| |||||||||| |||||    
T  4395732 ttttttttttgcacacactctc 4395753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 65 - 239
Target Start/End: Complemental strand, 52415777 - 52415602
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaata 164  Q
    ||||||||||||||||| |||| |||||||| ||  ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  52415777 gttcctttttaagtgtcgttttagaaaattaccacgaaaatagcaaagtgtatttttacacattttcttcctattataccctcaatttaatccaccaata 52415678  T
Q  165 tatttctattattt-tgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacattt 239  Q
    |||  ||||| |||  ||||||||||| ||||||||||||||||||||| |||| ||| |||||||||||||||||    
T  52415677 tatccctattttttcggcacacactttttctttccaataaatttaatatgttatatttttctcgtaacaaacattt 52415602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 65 - 290
Target Start/End: Complemental strand, 19270302 - 19270081
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaata 164  Q
    ||||||||||||||||| ||||| || ||||||| |||| |||  ||||||||| || ||||||||  || |||||||||||||||||||||||||||||    
T  19270302 gttcctttttaagtgtcgttttgaaatattaacaccaaattagcgaagtgtattattgcacatttttgtcttattataccctcattttaatccaccaata 19270203  T
Q  165 tatttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaac 264  Q
     |||  |||| ||||||| | |||||||||||||||||||||||||||||||||  |||||||||||||||| |||||| ||| |||||||||||||||     
T  19270202 aattgttatt-ttttgcataaactttctctttccaataaatttaatattttatc--tctctcgtaacaaacaattgttagttactatctttttctccaaa 19270106  T
Q  265 aaatttctttttgttttgcacactct 290  Q
    |||  ||| ||| |||||||||||||    
T  19270105 aaaaatctattt-ttttgcacactct 19270081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 65 - 269
Target Start/End: Original strand, 10430080 - 10430283
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaata 164  Q
    |||| |||||||||||  |||||||| |||||||||||| ||| ||||||||||||| || ||||  ||  ||||||| ||| |||||||||||||||||    
T  10430080 gttcttttttaagtgttgttttggaatattaacatcaaattagcaaagtgtatttttgcaaatttaatttttattatatccttattttaatccaccaata 10430179  T
Q  165 tatttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaac 264  Q
    |||| ||| | ||||||||||||||| ||||||||||||||||||||  ||||||||||||| ||||||| | |||||| ||| ||||||||||||||||    
T  10430180 tattcctact-ttttgcacacactttttctttccaataaatttaatacgttatctttctctcataacaaataattgttagttactatctttttctccaac 10430278  T
Q  265 aaatt 269  Q
     ||||    
T  10430279 caatt 10430283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 69 - 257
Target Start/End: Original strand, 11795463 - 11795650
Alignment:
Q  69 ctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatatatt 168  Q
    ||||||||||||| |||| ||| ||||||   |||||| | ||| |||||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  11795463 ctttttaagtgtcgttttagaatattaacgctaaaatattgaagagtatttttgcacattttcttcatattataccctcattttaatccaccaatatatt 11795562  T
Q  169 tctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatcttttt 257  Q
     || || ||||||||||||||||||||||||||||||||||||| |||| ||| |||  |||||||||||| ||| ||| |||||||||    
T  11795563 act-tttttttgcacacactttctctttccaataaatttaatatgttatatttttcttataacaaacattttttagttactatcttttt 11795650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 65 - 223
Target Start/End: Complemental strand, 1394981 - 1394824
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaata 164  Q
    ||||||||||||||||| |||| ||| ||| |||||||| |||| |||||||||||| ||||||||||| |||| |||||||||||||||||||||||||    
T  1394981 gttcctttttaagtgtcgttttagaatattcacatcaaattagtgaagtgtattttttcacattttctttctatcataccctcattttaatccaccaata 1394882  T
Q  165 tatttctattattttgcacacactttctctttccaataaatttaatattttatctttct 223  Q
    |||| ||||| |||| | |||||||||| ||||||||||||||||||| ||| ||||||    
T  1394881 tattcctatt-tttttcgcacactttctttttccaataaatttaatatgttaactttct 1394824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 69 - 269
Target Start/End: Complemental strand, 2752278 - 2752079
Alignment:
Q  69 ctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatatatt 168  Q
    |||||||||| || |||| ||| | |||||| ||| ||  |||||||||||||  ||||||||||||||||||||||||||||||||| |||||||  ||    
T  2752278 ctttttaagtatcgttttagaatagtaacattaaattaagaaagtgtatttttgtacattttcttcctattataccctcattttaatcgaccaataagtt 2752179  T
Q  169 tctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaacaaat 268  Q
    | |||| |||||||||||||||||||||| ||||||||| || | || ||||||||| |||| ||||| |||||||||| | ||||||||| ||||||||    
T  2752178 tatatt-ttttgcacacactttctctttcaaataaattttatgtgttgtctttctcttgtaataaacaattgttaattactttctttttcttcaacaaat 2752080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 150 - 270
Target Start/End: Complemental strand, 45925953 - 45925833
Alignment:
Q  150 tttaatccaccaatatatttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaat 249  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||| ||| |    
T  45925953 tttaatccaccaatatattcctatttttttgcacacactttctcttttcaataaatttaatatgttatctttctctcctaacaaacatttgttagttatt 45925854  T
Q  250 atctttttctccaacaaattt 270  Q
    ||||||||||||||| |||||    
T  45925853 atctttttctccaaccaattt 45925833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 65 - 246
Target Start/End: Original strand, 36319436 - 36319616
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaata 164  Q
    |||||||||||||| || |||| |||||||||||  |||||||  | |||||||||| ||||||||||||||||||||| |||||||||||||||| |||    
T  36319436 gttcctttttaagtatctttttagaaaattaacacaaaaatagcgatgtgtatttttgcacattttcttcctattatactctcattttaatccacc-ata 36319534  T
Q  165 tatttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaatt 246  Q
      || | ||| |||||||||||| || ||||||||||||||||||||| |||| ||| |||||||||||||| |||| ||||    
T  36319535 agttccaatttttttgcacacaccttatctttccaataaatttaatatgttatatttatctcgtaacaaacaattgtcaatt 36319616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 65 - 293
Target Start/End: Complemental strand, 52957834 - 52957615
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaata 164  Q
    |||| |||||||||| |||||| ||| ||||||||||||| | | |||||||||||| ||| |||||||| | ||||||| ||||||||||| || ||||    
T  52957834 gttcttttttaagtggcattttagaatattaacatcaaaacaatgaagtgtatttttgcaccttttcttcatgttataccatcattttaatctactaata 52957735  T
Q  165 tatttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaac 264  Q
    | ||  |||| ||||||||||||||||||| |         |||| || |||||||  ||| ||||||||||||||||| ||||||||||||||||||||    
T  52957734 tgttcttatt-ttttgcacacactttctctct--------attaacatgttatcttcatcttgtaacaaacatttgttagttaatatctttttctccaac 52957644  T
Q  265 aaatttctttttgttttgcacactctctc 293  Q
    |||||||| ||| |||||| | |||||||    
T  52957643 aaatttctattttttttgcgctctctctc 52957615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 88 - 242
Target Start/End: Original strand, 23698862 - 23699016
Alignment:
Q  88 gaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatatatttctattattttgcacacac 187  Q
    |||||||||||  |||||| | |||||||||||| ||||||||||||||||||||  |||| |||||||||||||||||||  |||| ||| ||||||||    
T  23698862 gaaaattaacacgaaaataatgaagtgtatttttgcacattttcttcctattataatctcaatttaatccaccaatatattcttattttttggcacacac 23698961  T
Q  188 tttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgtt 242  Q
    ||| ||||| |||| |||||||||| |||| ||| ||| |||||||| |||||||    
T  23698962 tttatcttttcaatgaatttaatatgttatatttatcttgtaacaaatatttgtt 23699016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 65 - 244
Target Start/End: Complemental strand, 4672043 - 4671864
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaata 164  Q
    |||| |||||||||||| |||| |||||||  ||  ||||||| ||||||||||||| || ||||||||||||||||||| ||| |||||| ||||||||    
T  4672043 gttcttttttaagtgtcgttttagaaaatttccacgaaaatagcaaagtgtatttttgcatattttcttcctattataccttcaatttaattcaccaata 4671944  T
Q  165 tatttctattattttgca-cacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaa 244  Q
    ||| |||| | ||||| |  ||||||| |||||||||||||||||| || |||| ||| ||||||||||||||||| ||||    
T  4671943 tatctctaat-ttttgaattacactttatctttccaataaatttaacatgttatatttttctcgtaacaaacattttttaa 4671864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 66 - 233
Target Start/End: Original strand, 40518582 - 40518747
Alignment:
Q  66 ttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatat 165  Q
    |||||||||||||||| ||||  ||| ||  ||| ||||||  ||||||||||||| |||||||||||||||||||||||||| ||||||| || |||||    
T  40518582 ttcctttttaagtgtcgttttaaaaattttccatgaaaataacaaagtgtatttttgcacattttcttcctattataccctcaatttaatctactaatat 40518681  T
Q  166 atttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaa 233  Q
    || |||||| ||| |  |||||||| | ||||||||||||||||||| |||| ||| |||||||||||    
T  40518682 atctctattttttgg--cacactttatatttccaataaatttaatatgttatatttttctcgtaacaa 40518747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 65 - 236
Target Start/End: Complemental strand, 39387159 - 39386988
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaata 164  Q
    |||| |||||||||||  |||| ||||||||  ||||||||||  | ||||| |||| || |||||||||||||||||  ||||||||||||||| ||||    
T  39387159 gttcatttttaagtgtatttttagaaaattactatcaaaatagcgatgtgtacttttgcaaattttcttcctattatattctcattttaatccacgaata 39387060  T
Q  165 tatttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaaca 236  Q
     ||| ||| | ||||||||||||||| |||||| ||||||||| |||| |||||||||||| ||||| ||||    
T  39387059 aattcctacttttttgcacacactttatctttcgaataaattttatatgttatctttctcttgtaaccaaca 39386988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 225 - 358
Target Start/End: Original strand, 40518764 - 40518894
Alignment:
Q  225 tcgtaacaaacatttgttaattaatatctttttctccaacaaatttctttttgttttgcacactctctcttacgtaacaaatgattgtcaatttt-taaa 323  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||| |||||  |||| ||||||||||||  | |||||||  ||||| |||||| ||||    
T  40518764 tcgtaacaaacatttgttacttagtatctttttctccaacaaattcctttt--tttttcacactctctct--cataacaaacaattgttaattttctaaa 40518859  T
Q  324 tattgtgcacatctttttaattaatttaagtcaat 358  Q
    |||||||||||||| ||||||||||||||||||||    
T  40518860 tattgtgcacatctctttaattaatttaagtcaat 40518894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 225 - 354
Target Start/End: Complemental strand, 30281063 - 30280935
Alignment:
Q  225 tcgtaacaaacatttgttaattaatatctttttctccaacaaatttctttttgttttgcacactctctcttacgtaacaaatgattgtcaa-tttttaaa 323  Q
    ||||||||||||||||||| | | ||||||||||||||| ||||| |||||| |||||||||||||||||  | |||||||  ||||| || ||||||||    
T  30281063 tcgtaacaaacatttgttactcactatctttttctccaagaaattacttttttttttgcacactctctct--cataacaaacaattgttaattttttaaa 30280966  T
Q  324 tattgtgcacatctttttaattaatttaagt 354  Q
    |||||||||||||| ||||||||||||||||    
T  30280965 tattgtgcacatctctttaattaatttaagt 30280935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 70 - 230
Target Start/End: Complemental strand, 30281240 - 30281082
Alignment:
Q  70 tttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatatattt 169  Q
    |||||||||||| ||||| ||| ||  ||||||||||| ||||||||||||| || ||||||||||||||||||||||| |||||| ||  ||||||| |    
T  30281240 tttttaagtgtcgttttgaaaattttccatcaaaatagcaaagtgtatttttgcatattttcttcctattataccctcaatttaattcattaatatatct 30281141  T
Q  170 ctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaa 230  Q
    ||||| ||| |  |||| ||| ||||| ||||||||||||||  |||| ||| ||||||||    
T  30281140 ctattttttgg--cacagtttatcttttcaataaatttaataagttatatttttctcgtaa 30281082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 69 - 212
Target Start/End: Original strand, 11237594 - 11237736
Alignment:
Q  69 ctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatatatt 168  Q
    ||||||||||||| |||| |||   |||||  |||||||| |||||||||||| ||  |||| ||||||||||||| |||||||||||||| ||||  ||    
T  11237594 ctttttaagtgtcgttttagaattataacacaaaaatagtgaagtgtatttttgcatttttt-ttcctattataccatcattttaatccactaataattt 11237692  T
Q  169 tctattattttgcacacactttctctttccaataaatttaatat 212  Q
    || ||| ||||||||||| ||| |||||||||||||||||||||    
T  11237693 tcaatttttttgcacacattttatctttccaataaatttaatat 11237736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 65 - 212
Target Start/End: Original strand, 31622773 - 31622920
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaata 164  Q
    |||||||||||||||||||| | |||  ||| ||  ||||||   |||||||||||| ||||||||  ||||||||| ||||||||||| ||||| ||||    
T  31622773 gttcctttttaagtgtcattctagaattttagcacaaaaataacgaagtgtatttttgcacatttttctcctattattccctcattttactccactaata 31622872  T
Q  165 tatttctattattttgcacacactttctctttccaataaatttaatat 212  Q
      || ||||| ||||||||||||||| ||||| |||||||||||||||    
T  31622873 atttcctatttttttgcacacactttatctttacaataaatttaatat 31622920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 127 - 269
Target Start/End: Original strand, 21965683 - 21965825
Alignment:
Q  127 ttttcttcctattataccctcattttaatccaccaatatatttctattattttgcacacactttctctttccaataaatttaatattttatctttctctc 226  Q
    ||||||||||||||||||||| | ||||||   ||||| ||||||||| ||| ||||||||||||| | |||||||||| |||| | ||||||||||||     
T  21965683 ttttcttcctattataccctcgtgttaatctgtcaataaatttctattttttggcacacactttctttgtccaataaatataatgtgttatctttctctt 21965782  T
Q  227 gtaacaaacatttgttaattaatatctttttctccaacaaatt 269  Q
     ||||||||| |||||| | | | ||||||||| |||||||||    
T  21965783 ataacaaacaattgttagtcactctctttttcttcaacaaatt 21965825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 225 - 358
Target Start/End: Complemental strand, 52415590 - 52415461
Alignment:
Q  225 tcgtaacaaacatttgttaattaatatctttttctccaacaaatttctttttgttttgcacactctctcttacgtaacaaatgattgtcaatttt-taaa 323  Q
    ||||||||||||||||||| ||| |||||||||||| ||  |||| ||||||  |||||||||| |||||  | |||||||  |||||||||||| ||||    
T  52415590 tcgtaacaaacatttgttagttactatctttttctcaaattaatt-cttttt--tttgcacactttctct--cctaacaaacaattgtcaattttctaaa 52415496  T
Q  324 tattgtgcacatctttttaattaatttaagtcaat 358  Q
    |||||||||||||| ||||||||||||||||||||    
T  52415495 tattgtgcacatctctttaattaatttaagtcaat 52415461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 137 - 287
Target Start/End: Original strand, 1453955 - 1454103
Alignment:
Q  137 attataccctcattttaatccaccaatatatttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaaca 236  Q
    |||||||||| ||||||||||| ||||| ||||||||| | ||||||| |  |||||||| ||||||||||||||  |||| ||||||||  ||||||||    
T  1453955 attatacccttattttaatccatcaatagatttctattttcttgcacatatattctcttttcaataaatttaataagttatttttctctcacaacaaaca 1454054  T
Q  237 tttgttaattaatatctttttctccaacaaatttctttttgttttgcacac 287  Q
     |||||| ||  | ||| | ||||||||||||| |||||| ||||||||||    
T  1454055 gttgttagtt--tctctctctctccaacaaattcctttttattttgcacac 1454103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 116 - 212
Target Start/End: Complemental strand, 43021531 - 43021437
Alignment:
Q  116 atttttacacattttcttcctattataccctcattttaatccaccaatatatttctattattttgcacacactttctctttccaataaatttaatat 212  Q
    |||||| ||||||| ||| |||||||||||| | |||||||||||||||||||  |||| |||||  ||||||||||||||||||||||||||||||    
T  43021531 atttttgcacatttactttctattatacccttagtttaatccaccaatatattcatatttttttg--cacactttctctttccaataaatttaatat 43021437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 70 - 164
Target Start/End: Original strand, 11817494 - 11817588
Alignment:
Q  70 tttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaata 164  Q
    ||||||||| || ||||  |||||||||| |||| ||| || | |||||||| || ||||| |||||||||||||||||||||||||||||||||    
T  11817494 tttttaagtttctttttaaaaaattaacaccaaattagcaatgcgtatttttgcagatttttttcctattataccctcattttaatccaccaata 11817588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 249 - 358
Target Start/End: Complemental strand, 4671837 - 4671737
Alignment:
Q  249 tatctttttctccaacaaatttctttttgttttgcacactctctcttacgtaacaaatgattgtcaattttt-aaatattgtgcacatctttttaattaa 347  Q
    |||||||||||||||||||||| |||||    ||||||||||| |      ||||||  ||||||||||||| ||||||||||||||||| |||||||||    
T  4671837 tatctttttctccaacaaatttattttt----tgcacactctcac------aacaaacaattgtcaattttttaaatattgtgcacatctatttaattaa 4671748  T
Q  348 tttaagtcaat 358  Q
    |||||||||||    
T  4671747 tttaagtcaat 4671737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 212
Target Start/End: Original strand, 23697483 - 23697559
Alignment:
Q  135 ctattataccctcattttaatccaccaatatatttctattattttgcacacactttctctttccaataaatttaatat 212  Q
    |||||||||||||||| |||||||   |||  |||||||  ||||||||||||||| |||||||||||||||||||||    
T  23697483 ctattataccctcattataatccattgataattttctatc-ttttgcacacactttatctttccaataaatttaatat 23697559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 223 - 319
Target Start/End: Complemental strand, 39157314 - 39157219
Alignment:
Q  223 tctcgtaacaaacatttgttaattaatatctttttctccaacaaatttctttttgttttgcacactctctcttacgtaacaaatgattgtcaatttt 319  Q
    |||| ||||||||| |||||| ||| |||| ||||||||||||||||| || || ||||||||||||| |||  | |||||||  ||||||||||||    
T  39157314 tctcataacaaacaattgttagttactatcattttctccaacaaattt-ttatttttttgcacactctatctctcataacaaacaattgtcaatttt 39157219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 214 - 269
Target Start/End: Complemental strand, 43021374 - 43021319
Alignment:
Q  214 ttatctttctctcgtaacaaacatttgttaattaatatctttttctccaacaaatt 269  Q
    |||| |||||||| ||| ||||| |||||| |||||||||||||||||||||||||    
T  43021374 ttatttttctctcataataaacaattgttagttaatatctttttctccaacaaatt 43021319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 127 - 236
Target Start/End: Original strand, 36964477 - 36964585
Alignment:
Q  127 ttttcttcctattataccctcattttaatccaccaatatatttctattattttgcacacactttctctttccaataaatttaatattttatctttctctc 226  Q
    ||||||| |||||||||||| |||| |||||||||||| |||  |||| ||||| | ||||||||| ||| |||||||||| ||    ||| ||||| ||    
T  36964477 ttttctttctattatacccttatttcaatccaccaataaattcatatttttttg-aaacactttcttttttcaataaatttgattaaatatatttctttc 36964575  T
Q  227 gtaacaaaca 236  Q
    ||||||||||    
T  36964576 gtaacaaaca 36964585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 114 - 149
Target Start/End: Original strand, 23699827 - 23699862
Alignment:
Q  114 gtatttttacacattttcttcctattataccctcat 149  Q
    |||||||| |||||||||||||||||||||||||||    
T  23699827 gtatttttgcacattttcttcctattataccctcat 23699862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 212
Target Start/End: Original strand, 786624 - 786722
Alignment:
Q  115 tatttttacacattttcttcctattataccctcattttaatccaccaatatatttcta-ttattttgcacacactttctctttccaataaatttaatat 212  Q
    |||||||  ||| ||| |||||||| ||||||||||||||||||  ||||  || ||| || |||| |||||| ||| |||||| ||||||||||||||    
T  786624 tatttttgtacacttttttcctattttaccctcattttaatccattaataatttcctactttttttccacacaatttatctttcaaataaatttaatat 786722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 358
Target Start/End: Original strand, 36319596 - 36319658
Alignment:
Q  297 cgtaacaaatgattgtcaatttt-taaatattgtgcacatctttttaattaatttaagtcaat 358  Q
    |||||||||  |||||||||||| ||||||||||| | || |||||||||| |||||||||||    
T  36319596 cgtaacaaacaattgtcaattttttaaatattgtgtatatttttttaattattttaagtcaat 36319658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 123; Significance: 4e-63; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 89 - 352
Target Start/End: Original strand, 8544148 - 8544408
Alignment:
Q  89 aaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatatatttctattattttgcacacact 188  Q
    |||||||||| |||| ||  || |||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||| ||  | ||||||||||||     
T  8544148 aaaattaacaccaaattaacaatgtgtatttttgcacattttcttcatattataccctcattttaatccaccaataaattcctgattttttgcacacacc 8544247  T
Q  189 ttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaacaaatttctttttgttttgcacact 288  Q
    || | ||||||||||||||||||| ||||||||||||||||| ||||| |||| ||||| ||||||||||||||||||||| | |||  |||||| ||||    
T  8544248 ttatatttccaataaatttaatatgttatctttctctcgtaagaaacaattgtcaattattatctttttctccaacaaattccattt--ttttgcccact 8544345  T
Q  289 ctctcttacgtaacaaatgattgtcaatttt-taaatattgtgcacatctttttaattaatttaa 352  Q
    ||||||  | || ||||  |||||||||||| ||||||||||||||||||||||||||| |||||    
T  8544346 ctctct--catatcaaacaattgtcaattttctaaatattgtgcacatctttttaattattttaa 8544408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 67 - 296
Target Start/End: Original strand, 17201875 - 17202104
Alignment:
Q  67 tcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatata 166  Q
    ||||||||||||||| |||| |||||||||||| |||||||  | |||||||||| |||||||||||||||||||||||||||||||||||||||||| |    
T  17201875 tcctttttaagtgtctttttagaaaattaacataaaaatagcgatgtgtatttttgcacattttcttcctattataccctcattttaatccaccaataaa 17201974  T
Q  167 tttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaacaa 266  Q
    || ||||| |||| |||| ||||| ||||||||||||||||||||| |||| |||||||||||||||||  |||| | |||  ||||| |||||||||||    
T  17201975 ttcctatttttttacacaaactttatctttccaataaatttaatatgttatttttctctcgtaacaaacgattgtcagttatgatcttattctccaacaa 17202074  T
Q  267 atttctttttgttttgcacactctctctta 296  Q
     ||| ||||| || |||||  |||||||||    
T  17202075 ttttattttttttgtgcactatctctctta 17202104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 70 - 241
Target Start/End: Complemental strand, 6428705 - 6428534
Alignment:
Q  70 tttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatatattt 169  Q
    |||||||||||| |||  ||||||||||| ||||||||| | |||||||||| ||||||||||| |||||||||| |||||||||||||||||||  ||     
T  6428705 tttttaagtgtcttttaagaaaattaacaccaaaatagtgatgtgtatttttgcacattttctttctattataccttcattttaatccaccaataagttc 6428606  T
Q  170 ctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgt 241  Q
    ||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  6428605 ctatttttttgcacacactttatctttccaataaatttaatatgttatctttctctcgtaacaaacaattgt 6428534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 88 - 358
Target Start/End: Original strand, 12436154 - 12436423
Alignment:
Q  88 gaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatatatttctattattttgcacacac 187  Q
    ||||||||||| ||||||| | | |||||||||| |||||||||||| |||||||| |||||||||||||||||||| |||  |||| ||||  ||||||    
T  12436154 gaaaattaacaccaaaataatgatgtgtatttttgcacattttcttcatattatacactcattttaatccaccaataaattcatatt-tttttaacacac 12436252  T
Q  188 tttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaacaaatttctttttgttttgcacac 287  Q
    ||| | ||| ||||| ||||||||| |||||||||||| |||||||||  ||||   ||| ||||||||||| ||||||||| || |||| ||||| |||    
T  12436253 tttattttttcaatatatttaatatgttatctttctctggtaacaaactattgtcggttattatctttttcttcaacaaattcctatttg-tttgcgcac 12436351  T
Q  288 tctctcttacgtaacaaatgattgtcaatttt-taaatattgtgcacatctttttaattaatttaagtcaat 358  Q
    ||| |||  |  ||||||  ||| |||||||| ||||||||||||||||||||||||||| |||||||||||    
T  12436352 tctttctctcaaaacaaacaattatcaattttctaaatattgtgcacatctttttaattattttaagtcaat 12436423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 70 - 358
Target Start/End: Complemental strand, 19804380 - 19804090
Alignment:
Q  70 tttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatatattt 169  Q
    |||||||||||| |||| |||||||||||  ||| ||| || ||||||||||  |||||||||||||||| |||||||||||||||| || |||| |||     
T  19804380 tttttaagtgtctttttagaaaattaacactaaattagcaatgtgtatttttgtacattttcttcctattctaccctcattttaatcgacaaataaattc 19804281  T
Q  170 ctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaacaaatt 269  Q
     |||| ||||| ||||||||| ||||||||| ||||||||||| |||| ||||||| |||||||| | |||| |  || |||||||||||||||||||||    
T  19804280 ttatttttttgtacacactttatctttccaacaaatttaatatgttatatttctctggtaacaaataattgtcagctattatctttttctccaacaaatt 19804181  T
Q  270 tct-ttttgttttgcacactctctcttacgtaacaaatgattgtcaatttt-taaatattgtgcacatctttttaattaatttaagtcaat 358  Q
     || |||| ||  || | ||||||||  | | |||||  |||||||||||| ||||||||||  |||| |||||||||| |||||||||||    
T  19804180 cctatttttttgcgctctctctctctctcattacaaacaattgtcaattttctaaatattgtaaacatttttttaattattttaagtcaat 19804090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 71 - 358
Target Start/End: Complemental strand, 1584132 - 1583843
Alignment:
Q  71 ttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattt---taatccaccaatatat 167  Q
    |||||||| || ||||  ||||| ||||||||| |||  | |||||||||| ||||||||||||||||||||||  |||||   ||||||||||||| ||    
T  1584132 ttttaagtatctttttaaaaaataaacatcaaattagcgatgtgtatttttgcacattttcttcctattataccaccatttaattaatccaccaataaat 1584033  T
Q  168 ttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaacaaa 267  Q
    | ||||| ||||||||||||||| |||||| ||||||||| |||  || | |||||||| ||||||||| ||||   ||| ||||||||||||||| |||    
T  1584032 tcctatttttttgcacacactttatctttctaataaatttcata-gttgtatttctctcataacaaacaattgtccgttattatctttttctccaataaa 1583934  T
Q  268 tttctttttgttttgcacactctctcttacgtaacaaatgattgtcaattttt-aaatattgtgcacatctttttaattaatttaagtcaat 358  Q
    || || ||| |||||| | ||| ||||  | |||||||  ||||||||||||| |||||||||||||||||||| ||||| ||||| |||||    
T  1583933 ttcctattt-ttttgcgcgctcgctctctcataacaaacaattgtcaatttttgaaatattgtgcacatcttttaaattattttaaatcaat 1583843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 66 - 233
Target Start/End: Original strand, 248892 - 249057
Alignment:
Q  66 ttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatat 165  Q
    |||||||||||||||| |||| |||||||  ||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| || ||    
T  248892 ttcctttttaagtgtcgttttagaaaatttccataaaaatagcaaagtgtatttttacacattttcttcctattataccctcaatttaatccactaacat 248991  T
Q  166 atttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaa 233  Q
    || |||||| ||| |  |||||||| ||||||||| ||||||||||| |||| ||| |||||||||||    
T  248992 atctctattttttgg--cacactttatctttccaaaaaatttaatatgttatatttttctcgtaacaa 249057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 138 - 358
Target Start/End: Original strand, 42673539 - 42673760
Alignment:
Q  138 ttataccctcattttaatccaccaatatatttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacat 237  Q
    |||||||||  |||||||||||||||| |||  |||| ||||||||||||||| || ||| |||||||||||||| |||| |||||||| ||||||| |     
T  42673539 ttatacccttgttttaatccaccaataaattcttatt-ttttgcacacactttatcattctaataaatttaatatgttatatttctctcataacaaataa 42673637  T
Q  238 ttgttaattaatatctttttctccaacaaa-tttctttttgttttgcacactctctcttacgtaacaaatgattgtcaa-tttttaaatattgtgcacat 335  Q
    ||||   ||| |||||||||||| |||||| ||||||||| ||||||||  |||||||  | |||||||  |||||||| ||||||||||||||||||||    
T  42673638 ttgtcggttattatctttttctctaacaaattttcttttttttttgcacgatctctctctcataacaaacaattgtcaattttttaaatattgtgcacat 42673737  T
Q  336 ctttttaattaatttaagtcaat 358  Q
    ||||||||||| || ||||||||    
T  42673738 ctttttaattatttaaagtcaat 42673760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 66 - 211
Target Start/End: Complemental strand, 1584324 - 1584179
Alignment:
Q  66 ttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatat 165  Q
    |||||||||||||||| ||||  |||||||||| |||| |||  | |||||||||| ||||||||||| |||||||||||||||||||||||||| |||     
T  1584324 ttcctttttaagtgtctttttaaaaaattaacaccaaattagcgatgtgtatttttgcacattttctttctattataccctcattttaatccaccgataa 1584225  T
Q  166 atttctattattttgcacacactttctctttccaataaatttaata 211  Q
    ||||||||| || |||||||||||| ||||||||||||||||||||    
T  1584224 atttctatttttctgcacacactttatctttccaataaatttaata 1584179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 71 - 272
Target Start/End: Complemental strand, 32474791 - 32474591
Alignment:
Q  71 ttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatatatttc 170  Q
    |||||||| || |||  |||||||| |||||||||||  |  ||||||||| ||||||||||| |||||||||||||||||||||||| ||||| |||      
T  32474791 ttttaagtatcttttaagaaaattaccatcaaaatagcgatttgtatttttgcacattttctttctattataccctcattttaatccaacaataaattca 32474692  T
Q  171 tattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaacaaattt 270  Q
    |||| ||| ||| ||||||| ||||||||||||||||||||| |||||||| | |||||| ||||| |||| | ||| ||||||||||| ||||||||||    
T  32474691 tattttttcgcaaacactttatctttccaataaatttaatatgttatcttt-tatcgtaataaacaattgtcagttattatctttttcttcaacaaattt 32474593  T
Q  271 ct 272  Q
    ||    
T  32474592 ct 32474591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 65 - 294
Target Start/End: Original strand, 13219800 - 13220030
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttc--ctattataccctcattttaatccaccaa 162  Q
    ||||||||||||||||| |||| ||||||||||| |||| || | |  ||||||||| ||||| || |||  |||| |||||||||||| ||||||||||    
T  13219800 gttcctttttaagtgtc-ttttagaaaattaacaccaaattaatgatatgtatttttgcacatctttttcttctatcataccctcattt-aatccaccaa 13219897  T
Q  163 tatatttctattattttgcacacactt--tctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctc 260  Q
    |||||||||||| ||||||||||||||  | | ||||||||||||||||||| |||||||| | || ||||||||| |||| ||||| |||| ||||||     
T  13219898 tatatttctatttttttgcacacactttatttttttccaataaatttaatatgttatctttttatcataacaaacaattgtgaattattatccttttctt 13219997  T
Q  261 caacaaatttctttttgttttgcacactctctct 294  Q
    | ||||| |||||||| |||||| ||||||||||    
T  13219998 cgacaaa-ttcttttttttttgcgcactctctct 13220030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 101 - 272
Target Start/End: Complemental strand, 17200658 - 17200487
Alignment:
Q  101 aaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatatatttctattattttgcacacactttctctttccaa 200  Q
    |||||||| ||||||||||||  |  | |||||| ||||||| ||||||||||||| |  |||||||||| ||| | ||| |||||||||||||||| ||    
T  17200658 aaaatagtgaagtgtatttttgtatttcttcttcttattatatcctcattttaatctataaatatatttccattttgttgtacacactttctctttctaa 17200559  T
Q  201 taaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaacaaatttct 272  Q
    ||||| |||||| |||||||||| ||||||||||||||||||||||| ||||||||| | ||||||||||||    
T  17200558 taaatataatatgttatctttctttcgtaacaaacatttgttaattactatctttttatgcaacaaatttct 17200487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 66 - 242
Target Start/End: Complemental strand, 37270200 - 37270025
Alignment:
Q  66 ttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatat 165  Q
    |||||||||||||||| |||| |||||||  ||  ||||||| ||||||||||||| ||||||||||||||| |||||||||| |||||||||| |||||    
T  37270200 ttcctttttaagtgtcgttttagaaaatttccacaaaaatagcaaagtgtatttttgcacattttcttcctactataccctcaatttaatccactaatat 37270101  T
Q  166 atttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgtt 242  Q
    || | |||| |||||| |||||||| || ||| |||||||||||||| |||| ||| |||| |||||||||| ||||    
T  37270100 atctatatt-ttttgctcacactttatcattctaataaatttaatatgttatatttttctcataacaaacatatgtt 37270025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 124 - 267
Target Start/End: Original strand, 39940175 - 39940317
Alignment:
Q  124 acattttcttcctattataccctcattttaatccaccaatatatttctattattttgcacacactttctctttccaataaatttaatattttatctttct 223  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||| |||||||||  |||||||||||||||||||||||||| |||||    
T  39940175 acattttcttcctattataccctcattttaatccaccaataaattcctatt-tttttcacacacttgatctttccaataaatttaatattttatttttct 39940273  T
Q  224 ctcgtaacaaacatttgttaattaatatctttttctccaacaaa 267  Q
    ||| ||||||||  ||||   ||| || ||||||||||||||||    
T  39940274 ctcataacaaactattgtccgttattaactttttctccaacaaa 39940317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 112 - 358
Target Start/End: Original strand, 11991722 - 11991966
Alignment:
Q  112 gtgtatttttacacattttcttcctattataccctcattttaatccaccaatatatttctattattttgcacacactttctctttccaataaatttaata 211  Q
    |||||||||| ||||||||||||||| |||||| ||||||||||| ||||| | |||  | || ||||||||| ||||| | |||| |||||||||||||    
T  11991722 gtgtatttttgcacattttcttcctaatataccttcattttaatctaccaaaaaattcatgtttttttgcacaaactttatatttctaataaatttaata 11991821  T
Q  212 ttttatctttctctcgtaacaaacatttgttaattaatatctttttctccaacaaatttctttttgttttgcacactctctcttacgtaacaaatgattg 311  Q
    | |||||||||||| |||||||||| |||| |  || |||||||| || ||| ||||| |  ||| |||| ||| ||||||||  | |||||||  ||||    
T  11991822 tgttatctttctcttgtaacaaacaattgtcagatattatcttttacttcaaaaaattccaattt-ttttacacgctctctct--cataacaaacaattg 11991918  T
Q  312 tcaattt-ttaaatattgtgcacatctttttaattaatttaagtcaat 358  Q
    |||||||  |||||| ||||||||| |||||||||| |||||||||||    
T  11991919 tcaatttcctaaatactgtgcacatatttttaattattttaagtcaat 11991966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 132 - 360
Target Start/End: Original strand, 18412830 - 18413056
Alignment:
Q  132 ttcctattataccctcattttaatccaccaatatatttctattattttgcacacactttctctttcc-aataaatttaatattttatctttctctcgtaa 230  Q
    ||||||||||||| | ||||||||||||||||| |||| |||| ||||||||| ||||| | |||   |||||||||||||| |||||||||||||||||    
T  18412830 ttcctattatacctttattttaatccaccaataaatttttatt-ttttgcacatactttattttttttaataaatttaatatattatctttctctcgtaa 18412928  T
Q  231 caaacatttgttaattaatatctttttctccaacaaatttctttttgttttgcacactctctcttacgtaacaaatgattgtcaatttt-taaatattgt 329  Q
    |||||| |||| | ||| |||||||||||  || ||| ||||| || |||||  | | ||||||| | |||||||  |||||||||||| ||||||||||    
T  18412929 caaacaattgtcagttattatctttttctttaa-aaaattcttatttttttg--cgcgctctctttcataacaaacaattgtcaattttctaaatattgt 18413025  T
Q  330 gcacatctttttaattaatttaagtcaattt 360  Q
    |||||||||||| |||| |||||||| ||||    
T  18413026 gcacatctttttcattattttaagtcgattt 18413056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 65 - 246
Target Start/End: Complemental strand, 28620670 - 28620492
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaata 164  Q
    ||||||||||||||||| |||| |||||||||||   |||||   | |||||||||| ||| ||||||||||||||||||||||||||||||| ||| ||    
T  28620670 gttcctttttaagtgtctttttagaaaattaacac--aaataacgatgtgtatttttgcaccttttcttcctattataccctcattttaatccgcca-ta 28620574  T
Q  165 tatttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaatt 246  Q
      || ||||| |||||||||||| || ||||| ||||||||||||||  |||| |||||||||||||||||| |||| ||||    
T  28620573 agttcctatttttttgcacacaccttatcttttcaataaatttaataagttatatttctctcgtaacaaacaattgtcaatt 28620492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 72 - 212
Target Start/End: Original strand, 36059554 - 36059693
Alignment:
Q  72 tttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatatatttct 171  Q
    ||||||||||  ||| |||  ||||||  |||||||| |||||||||||| |||||||| |||||||||||||||||||||||||||| ||||  || ||    
T  36059554 tttaagtgtcgatttagaattttaacacaaaaatagtgaagtgtattttttcacatttttttcctattataccctcattttaatccactaataatttcct 36059653  T
Q  172 attattttgcacacactttctctttccaataaatttaatat 212  Q
    ||| ||||||||||||||| |||||||||||||||||||||    
T  36059654 att-ttttgcacacactttatctttccaataaatttaatat 36059693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 65 - 212
Target Start/End: Complemental strand, 20202310 - 20202163
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaata 164  Q
    ||||||||||||||||| ||||  ||  ||||||  |||||||  |||||||||||| |||||||| |||||||||||||||||||||||| ||| ||||    
T  20202310 gttcctttttaagtgtcgttttaaaattttaacacaaaaatagctaagtgtatttttgcacatttttttcctattataccctcattttaattcactaata 20202211  T
Q  165 tatttc-tattattttgcacacactttctctttccaataaatttaatat 212  Q
     ||||| |||| ||||||||||||||| ||||| |||||||||||||||    
T  20202210 -atttcatatttttttgcacacactttatcttttcaataaatttaatat 20202163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 65 - 164
Target Start/End: Original strand, 39585348 - 39585447
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaata 164  Q
    ||||||||||||||||| |||| ||||||||||| ||||||||  | |||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  39585348 gttcctttttaagtgtctttttagaaaattaacaccaaaatagcgacgtgtatttttgcacattttcttcctattataccctcattttaatccatcaata 39585447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 75 - 372
Target Start/End: Original strand, 19133037 - 19133337
Alignment:
Q  75 aagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatatatttctatt 174  Q
    |||||||||||||||| |||| ||  ||| |||  |||||||| ||||||||||||||| ||||||||||||||||| | | |||||     |||   ||    
T  19133037 aagtgtcattttggaatattagcacgaaattagcgaagtgtatatttacacattttctttctattataccctcattt-atttcacca-----ttt---tt 19133127  T
Q  175 attttgcacacactttctctttccaataaatttaatattttatct--------------ttctctcgtaacaaacatttgttaattaatatctttttctc 260  Q
     |||||||||||||||| |||||||||||||||||||| ||||||              | |||| |||||||||  || ||| ||| ||||| ||||||    
T  19133128 tttttgcacacactttccctttccaataaatttaatatgttatctaagataacttatcttcctcttgtaacaaacgattattagttactatctctttctc 19133227  T
Q  261 caacaaatttctttttgttttgcacactctctcttacgtaacaaatgattgtcaatttt-taaatattgtgcacatctttttaattaatttaagtcaatt 359  Q
    ||||||| |  ||||| ||||  ||||||||||| |  |||||||| ||| |||||||| |||||||||||||||||| ||||||| |||||||||||||    
T  19133228 caacaaaatctttttttttttttacactctctctaa--taacaaataattttcaattttctaaatattgtgcacatctctttaatt-atttaagtcaatt 19133324  T
Q  360 ttcaatgagtctt 372  Q
    ||||| |||||||    
T  19133325 ttcaacgagtctt 19133337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 112 - 269
Target Start/End: Original strand, 25612756 - 25612911
Alignment:
Q  112 gtgtatttttacacattttcttcctattataccctcattttaatccaccaatatatttctattattttgcacacactttctctttccaataaatttaata 211  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||||  |  ||| |||  || |||||||||| |||  |||||  |||||||||||||    
T  25612756 gtgtatttttgcacattttcttcctattataccctcattt-aatccattag-ataattcattttttttgcacacgcttcatctttagaataaatttaata 25612853  T
Q  212 ttttatctttctctcgtaacaaacatttgttaattaatatctttttctccaacaaatt 269  Q
    | ||||||||||||||||| ||||| | | || ||| |||||||||||||||||||||    
T  25612854 tgttatctttctctcgtaagaaacaatcgctagttattatctttttctccaacaaatt 25612911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 70 - 214
Target Start/End: Complemental strand, 17558438 - 17558295
Alignment:
Q  70 tttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatatattt 169  Q
    |||||||||||| |||| |||  ||||||  |||||||  |||||||||||||||||  || ||||||||||| |||||||||||||||| ||||  ||     
T  17558438 tttttaagtgtcgttttagaattttaacacaaaaatagcgaagtgtatttttacacacatttttcctattatatcctcattttaatccactaataatttc 17558339  T
Q  170 ctattattttgcacacactttctctttccaataaatttaatattt 214  Q
    ||||| ||||||||||||||| | ||||||||||| | |||||||    
T  17558338 ctatt-ttttgcacacactttatatttccaataaactaaatattt 17558295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 135 - 243
Target Start/End: Complemental strand, 14967928 - 14967820
Alignment:
Q  135 ctattataccctcattttaatccaccaatatatttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaa 234  Q
    ||||||||| || ||||||||||||||||| |||| |||| |||| |||||| ||| |||||| |||||||||||| | |||| |||||||| |||||||    
T  14967928 ctattatactctaattttaatccaccaataaatttatatttttttacacacattttttctttcgaataaatttaatgtgttatttttctctcataacaaa 14967829  T
Q  235 catttgtta 243  Q
    || ||||||    
T  14967828 caattgtta 14967820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 66 - 212
Target Start/End: Complemental strand, 16366191 - 16366045
Alignment:
Q  66 ttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatat 165  Q
    |||||||| ||||||| |||  |||  ||||||  |||||||| |||||||||||| || | ||| |||||||||||||||||||||||||  | ||||     
T  16366191 ttccttttgaagtgtcgtttaagaattttaacacaaaaatagtgaagtgtatttttgcaaacttttttcctattataccctcattttaatcttctaata- 16366093  T
Q  166 atttc-tattattttgcacacactttctctttccaataaatttaatat 212  Q
    ||||| |||  |||||| |||||||| |||||||||||||||||||||    
T  16366092 atttcatatatttttgcgcacactttatctttccaataaatttaatat 16366045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 115 - 234
Target Start/End: Original strand, 36244539 - 36244657
Alignment:
Q  115 tatttttacacattttcttcctattataccctcattttaatccaccaatatatttctattattttgcacacactttctctttccaataaatttaatattt 214  Q
    ||||||| ||||||||||| ||||||||| || ||||||||||||||||| ||||||||| |||||||  || ||||   |||||||||||||||| | |    
T  36244539 tatttttgcacattttctttctattatactcttattttaatccaccaataaatttctatt-ttttgcatgcattttcctgttccaataaatttaatgtgt 36244637  T
Q  215 tatctttctctcgtaacaaa 234  Q
    |||||||||||  |||||||    
T  36244638 tatctttctcttataacaaa 36244657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 70 - 241
Target Start/End: Original strand, 11825179 - 11825352
Alignment:
Q  70 tttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttaca--cattttcttcctattataccctcattttaatccaccaatatat 167  Q
    |||||||||||| |||| ||||||||| |  |||||||  |||||||||||  ||    |||||||||||||||||||||| | |||||||| |||||||    
T  11825179 tttttaagtgtcgttttagaaaattaatacaaaaatagcgaagtgtattttagcattttttttcttcctattataccctcaatgtaatccacaaatatat 11825278  T
Q  168 ttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgt 241  Q
    |  |||| ||| ||||| ||||| ||||  ||||||||||||||| |||| ||| |||| ||| ||||| ||||    
T  11825279 tcttattttttggcacatactttatcttctcaataaatttaatatgttatttttatctcataaaaaacaattgt 11825352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 228 - 292
Target Start/End: Complemental strand, 37270007 - 37269943
Alignment:
Q  228 taacaaacatttgttaattaatatctttttctccaacaaatttctttttgttttgcacactctct 292  Q
    |||||||||||||||| ||| |||||||||| ||||||||||  ||||| |||||||||||||||    
T  37270007 taacaaacatttgttacttactatctttttccccaacaaattctttttttttttgcacactctct 37269943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 65 - 164
Target Start/End: Original strand, 32717599 - 32717697
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaata 164  Q
    ||||||||||||||||| |||| |||  ||||||  |||||||  |||||||||||  |||| ||| |||||||||||||||||| ||||||||| ||||    
T  32717599 gttcctttttaagtgtcgttttagaattttaacacaaaaatagcgaagtgtattttg-cacacttttttcctattataccctcatgttaatccactaata 32717697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 358
Target Start/End: Original strand, 249070 - 249204
Alignment:
Q  225 tcgtaacaaacatttgttaattaatatctttttctccaacaaat--ttc--tttttgttttgcacactctctcttacgtaacaaatgattgtcaatttt- 319  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||  |||  ||| | |||||||||||||||||  | ||||||| |||    ||||||     
T  249070 tcgtaacaaacatttgttacttagtatctttttctccaacaaattattccttttattttttgcacactctctct--cataacaaa-gat----aattttc 249162  T
Q  320 taaatattgt---gcacatctttttaattaatttaagtcaat 358  Q
    ||||||||||   |||||||| ||||||||||||||||||||    
T  249163 taaatattgttgagcacatctctttaattaatttaagtcaat 249204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 147 - 269
Target Start/End: Complemental strand, 17592154 - 17592033
Alignment:
Q  147 cattttaatccaccaatatatttctattattttgc-acacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaat 245  Q
    ||||||||| || ||||| ||||||||| |||||| | ||||||||| |||||||||||||| || | |||| |||||||  ||||||||| |||||| |    
T  17592154 cattttaattcatcaataaatttctatt-ttttgcgaaacactttctttttccaataaatttgatgtgttatttttctct-ataacaaacaattgttatt 17592057  T
Q  246 taatatctttttctccaacaaatt 269  Q
    || | |||||| || |||||||||    
T  17592056 tactctcttttccttcaacaaatt 17592033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 136 - 241
Target Start/End: Complemental strand, 31127003 - 31126899
Alignment:
Q  136 tattataccctcattttaatccaccaatatatttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaac 235  Q
    |||||||| |||||||||||| ||||||| |||||||||  ||   |||||||||||||||  ||||||||| || | ||||| ||||||| | ||||||    
T  31127003 tattatactctcattttaatcgaccaataaatttctatttgttaatacacactttctcttttaaataaatttgatgtgttatc-ttctctcttgacaaac 31126905  T
Q  236 atttgt 241  Q
    | ||||    
T  31126904 aattgt 31126899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 308 - 358
Target Start/End: Complemental strand, 17201865 - 17201814
Alignment:
Q  308 attgtcaattttt-aaatattgtgcacatctttttaattaatttaagtcaat 358  Q
    ||||||||||||| ||||||||||| || ||||||||||| |||||||||||    
T  17201865 attgtcaattttttaaatattgtgcgcacctttttaattattttaagtcaat 17201814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 358
Target Start/End: Complemental strand, 28620512 - 28620451
Alignment:
Q  297 cgtaacaaatgattgtcaattttt-aaatattgtgcacatctttttaattaatttaagtcaat 358  Q
    |||||||||  ||||||||||||| |||||||||||| || |||||||||| |||||||||||    
T  28620512 cgtaacaaacaattgtcaattttttaaatattgtgcatat-tttttaattattttaagtcaat 28620451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 358
Target Start/End: Original strand, 39585458 - 39585539
Alignment:
Q  278 ttttgcacactctctcttacgtaacaaatgattgtcaatttt-taaatattgtgcacatctttttaattaatttaagtcaat 358  Q
    |||||||| ||||||||  | |||||||   |||| |||||| ||||||||||||| ||||||||| ||| |||||||||||    
T  39585458 ttttgcacgctctctctctcataacaaacatttgttaattttctaaatattgtgcatatctttttagttattttaagtcaat 39585539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 122; Significance: 2e-62; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 77 - 269
Target Start/End: Original strand, 5604 - 5797
Alignment:
Q  77 gtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatatatttcta-tta 175  Q
    ||||||||||| || |||||||||||||||| ||||||||||||| ||||||||||||| |||||||| |||||||||| ||| |||||||| ||| ||     
T  5604 gtgtcattttgaaatattaacatcaaaatagcaaagtgtatttttgcacattttcttccaattataccatcattttaattcactaatatattcctaattt 5703  T
Q  176 ttttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaacaaatt 269  Q
    ||||||||||||||||||||| ||||||||||||||| |||| ||||||| ||||||||||||||||| ||| |||||||||||||||||||||    
T  5704 ttttgcacacactttctcttttcaataaatttaatatgttatttttctcttgtaacaaacatttgttagttactatctttttctccaacaaatt 5797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0841 (Bit Score: 117; Significance: 2e-59; HSPs: 2)
Name: scaffold0841
Description:

Target: scaffold0841; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 127 - 294
Target Start/End: Original strand, 4205 - 4373
Alignment:
Q  127 ttttcttcctattataccctcattttaatccaccaatatatttctattattttgcacacactttctctttccaataaatttaatattttatctttctctc 226  Q
    |||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  4205 ttttcttcctattataccctcattttaatccaccaatatattcctttttttttgcacacactttctctttccaataaatttaatatattatctttctctc 4304  T
Q  227 gtaacaaacatttgttaattaatatctttttctccaacaaatttc-tttttgttttgcacactctctct 294  Q
    ||||||||||||||||| | ||| | ||||||||||||||||| | ||||| |||||||| ||||||||    
T  4305 gtaacaaacatttgttagtcaatgtgtttttctccaacaaattcctttttttttttgcacgctctctct 4373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0841; HSP #2
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 110 - 265
Target Start/End: Original strand, 3870 - 4026
Alignment:
Q  110 aagtgtatttttacacattttcttcctattataccctcattttaatccaccaatatatttctattatttt-gcacacactttctctttccaataaattta 208  Q
    |||||||||||| ||  |||||||||||||||||||||||||||||| | ||||||||| || || |||| |||||||||||||||||||||||||||||    
T  3870 aagtgtattttttcagtttttcttcctattataccctcattttaatctaacaatatattccttttttttttgcacacactttctctttccaataaattta 3969  T
Q  209 atattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaaca 265  Q
    | || |||| ||||||||||||||||||||||||| ||| | | |||||||||||||    
T  3970 acatgttatttttctctcgtaacaaacatttgttagttattgtgtttttctccaaca 4026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1327 (Bit Score: 114; Significance: 1e-57; HSPs: 1)
Name: scaffold1327
Description:

Target: scaffold1327; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 67 - 346
Target Start/End: Complemental strand, 1397 - 1121
Alignment:
Q  67 tcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatata 166  Q
    |||||||||||| || ||||  |||||||||| || ||||| || ||||||||||  |||||||||||||||||| | |||||||||||| ||||||| |    
T  1397 tcctttttaagtatctttttaaaaaattaacaccagaatagcaatgtgtatttttgtacattttcttcctattatgctctcattttaatc-accaataaa 1299  T
Q  167 tttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaacaa 266  Q
    ||| |||| |||  |||||||||| ||||| ||||||||||||||| ||||||||||||| ||||||||| |||| | ||| ||||||||||||||||||    
T  1298 tttttattttttgacacacactttatcttttcaataaatttaatatgttatctttctctcttaacaaacaattgtcacttattatctttttctccaacaa 1199  T
Q  267 atttctttttgttttgcacactctctcttacgtaacaaatgattgtcaatttt-taaatattgtgcacatctttttaatta 346  Q
    | |||  ||| |||||| | ||||||||  | |||||||  |||||||||||| |||||||||||||||||||||||||||    
T  1198 a-ttcaattttttttgcgcgctctctct--cataacaaacaattgtcaattttctaaatattgtgcacatctttttaatta 1121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 97; Significance: 1e-47; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 90 - 294
Target Start/End: Complemental strand, 257386 - 257183
Alignment:
Q  90 aaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatatatttctattattttgcacacactt 189  Q
    |||||||||  |||||||  | |||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||| ||||| ||||||||||||||    
T  257386 aaattaacacgaaaatagcgatgtgtatttttacacattttcttcctattataccctcatattaatccatcaataaattcctatttttttgcacacactt 257287  T
Q  190 tctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaacaaatttctttttgttttgcacactc 289  Q
    | ||||| ||||||||||||||| ||||| |||||||| |||||||| |||  | ||| ||||||||||| |||| |||| |||||| |||||| || ||    
T  257286 tatcttttcaataaatttaatatgttatccttctctcgaaacaaacaattg-cagttattatctttttcttcaacgaattccttttttttttgcgcattc 257188  T
Q  290 tctct 294  Q
    |||||    
T  257187 tctct 257183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 69 - 212
Target Start/End: Original strand, 271855 - 272004
Alignment:
Q  69 ctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacatttt-----cttcctattataccctcattttaatccaccaat 163  Q
    ||||||||||||| |||| |||  ||||||   |||||| |||||||| |||| ||| ||||     ||| ||||||||||||||||||||||||| |||    
T  271855 ctttttaagtgtcgttttagaattttaacacagaaatagcaaagtgtaattttgcactttttttttcctttctattataccctcattttaatccactaat 271954  T
Q  164 atatttc--tattattttgcacacactttctctttccaataaatttaatat 212  Q
    | |||||  | || |||| |||||||||| ||||| |||||||||||||||    
T  271955 a-atttcttttttttttttcacacactttatcttttcaataaatttaatat 272004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1986 (Bit Score: 96; Significance: 6e-47; HSPs: 1)
Name: scaffold1986
Description:

Target: scaffold1986; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 89 - 269
Target Start/End: Complemental strand, 747 - 565
Alignment:
Q  89 aaaattaacatcaaa--atagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatatatttctattattttgcacaca 186  Q
    |||||||||||||||  ||||  | ||||| |||||||||||||||| |||||||||||| ||||||||||||||||| ||||||||| |||| ||||||    
T  747 aaaattaacatcaaattatagcgatgtgtacttttacacattttctttctattataccctaattttaatccaccaataaatttctatttttttacacaca 648  T
Q  187 ctttctctttccaataaatttaatattttatctttctctcgtaacaaacatttgttaattaatatctttttctccaacaaatt 269  Q
    |||| ||||||||||||||| | ||| ||||||||||||||||| ||||| ||||   ||| |||||||||||||||||||||    
T  647 ctttatctttccaataaattaagtatgttatctttctctcgtaataaacacttgtctgttattatctttttctccaacaaatt 565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1130 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold1130
Description:

Target: scaffold1130; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 65 - 212
Target Start/End: Complemental strand, 856 - 709
Alignment:
Q  65 gttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacaca-ttttcttcctattataccctcattttaatccaccaat 163  Q
    ||||||||||||||||| ||||  ||  ||||||| ||||||  ||||||||||||| |||| |||| ||||||||||||||||| ||||||| || |||    
T  856 gttcctttttaagtgtcgttttataattttaacataaaaataaaaaagtgtatttttgcacactttttttcctattataccctcaatttaatctactaat 757  T
Q  164 atatttctattattttgcacacactttctctttccaataaatttaatat 212  Q
    | |||||  || ||||||| ||| ||| |||||||||||||||||||||    
T  756 a-atttccttttttttgcaaacattttatctttccaataaatttaatat 709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 113 - 212
Target Start/End: Original strand, 48529 - 48627
Alignment:
Q  113 tgtatttttacacattttcttcctattataccctcattttaatccaccaatatatttctattattttgcacacactttctctttccaataaatttaatat 212  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||  ||||  |||||||| ||||||||||||| | | ||| |||||||||||||||    
T  48529 tgtatttttacacatttttttc-tattataccctcattttaatccattaataattttctatttttttgcacacactatattttttcaataaatttaatat 48627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0637 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0637
Description:

Target: scaffold0637; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 131 - 269
Target Start/End: Complemental strand, 3910 - 3774
Alignment:
Q  131 cttcctattataccctcattttaatccaccaatatatttctattattttgcacacactttctctttccaataaatttaatattttatctttctctcgtaa 230  Q
    ||||||||| |||  ||||||||||||||||||| | | || || |||| |||||||||||||||||| ||||||||||||| |||||||| |||| |||    
T  3910 cttcctattttacattcattttaatccaccaataaaat-cttttttttt-cacacactttctctttccgataaatttaatatgttatctttgtctcataa 3813  T
Q  231 caaacatttgttaattaatatctttttctccaacaaatt 269  Q
    |||| |  | ||| ||| ||||| |||||| ||||||||    
T  3812 caaataaattttagttattatctctttctctaacaaatt 3774  T

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Target: scaffold0006 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 66 - 212
Target Start/End: Original strand, 45913 - 46058
Alignment:
Q  66 ttcctttttaagtgtcattttggaaaattaacatcaaaatagtaaagtgtatttttacacattttcttcctattataccctcattttaatccaccaatat 165  Q
    |||||||||||||||| |||| |||  ||||||  ||||||  ||| ||||||||| |||| ||| |||||||| |||||||| ||||||| || ||||     
T  45913 ttcctttttaagtgtcgttttagaattttaacaaaaaaata--aaaatgtatttttgcacacttttttcctattgtaccctcaatttaatctacgaata- 46009  T
Q  166 atttctattatttt--gcacacactttctctttccaataaatttaatat 212  Q
    |||||| || ||||  ||||||| ||| |||||||||||||||||||||    
T  46010 atttctttttttttttgcacacattttatctttccaataaatttaatat 46058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 113 - 184
Target Start/End: Complemental strand, 184639 - 184568
Alignment:
Q  113 tgtatttttacacattttcttcctattataccctcattttaatccaccaatatatttctattattttgcaca 184  Q
    ||||||||| |||||||| || |||||||||||||||||||||| ||||||| |||  |||| |||||||||    
T  184639 tgtatttttgcacattttttttctattataccctcattttaatctaccaataaattcatatttttttgcaca 184568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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