View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16840_high_25 (Length: 294)
Name: NF16840_high_25
Description: NF16840
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16840_high_25 |
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Alignment Details
Target: chr7 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 1 - 282
Target Start/End: Original strand, 25264425 - 25264703
Alignment:
| Q |
1 |
tggtgatgcgaatgatgacaaagtgagcgaatggttgcactggactatacaccatcacgatgtacctacttttcttggtgggcaccactctttgagaaat |
100 |
Q |
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||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
25264425 |
tggtgatgcgaatgacgacaaagtgagcgcatggttgcactggactatacaccatcacgatgtacctacttttcttggtgggcacctctctttgagaaat |
25264524 |
T |
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| Q |
101 |
aagagcgccaagtatgttgatttgttgtacttggagtattttcgagatctagagatggtgtatatgacttctctcgggagggcgactatcctaacctact |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
25264525 |
aagagcgccaagtatgttgatttgttgtacttggagtattttcgagatctagagatggtgtatatgacttctctcgggagggcgacta-cctaacctact |
25264623 |
T |
|
| Q |
201 |
tataccgagagctaaataatgtgtgttagtataggacgaagcaattggaattggttacatgacactacatgagataaaataa |
282 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
25264624 |
tataccgagagctaaataatgtgtgttagtataggacgaagcaattgg--ttggttacatgacactacatgagataaaataa |
25264703 |
T |
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