View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16841_high_6 (Length: 369)

Name: NF16841_high_6
Description: NF16841
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16841_high_6
NF16841_high_6
[»] chr7 (9 HSPs)
chr7 (16-363)||(1985421-1985766)
chr7 (44-114)||(14076931-14077001)
chr7 (44-114)||(14386959-14387029)
chr7 (89-165)||(18514481-18514557)
chr7 (31-93)||(15571632-15571694)
chr7 (46-113)||(22064361-22064428)
chr7 (44-108)||(19350803-19350867)
chr7 (67-111)||(22063928-22063972)
chr7 (45-113)||(29476009-29476077)
[»] chr6 (9 HSPs)
chr6 (16-350)||(6947329-6947643)
chr6 (19-246)||(6934824-6935041)
chr6 (16-145)||(6921033-6921161)
chr6 (31-165)||(6954181-6954315)
chr6 (16-165)||(6942623-6942778)
chr6 (53-114)||(20770921-20770982)
chr6 (240-303)||(6934713-6934776)
chr6 (33-98)||(17369931-17369996)
chr6 (264-350)||(6942472-6942557)
[»] scaffold0354 (1 HSPs)
scaffold0354 (22-123)||(7725-7825)
[»] chr4 (3 HSPs)
chr4 (44-114)||(53775104-53775174)
chr4 (44-112)||(11981422-11981490)
chr4 (44-111)||(11970722-11970789)
[»] chr2 (2 HSPs)
chr2 (44-101)||(18913265-18913322)
chr2 (44-101)||(18908517-18908574)
[»] chr8 (1 HSPs)
chr8 (44-105)||(27618730-27618791)
[»] chr5 (1 HSPs)
chr5 (33-102)||(18964561-18964630)
[»] chr1 (1 HSPs)
chr1 (23-100)||(15961464-15961541)


Alignment Details
Target: chr7 (Bit Score: 307; Significance: 1e-173; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 307; E-Value: 1e-173
Query Start/End: Original strand, 16 - 363
Target Start/End: Complemental strand, 1985766 - 1985421
Alignment:
Q  16 aattttgtggttcagtgccaagggatacgttgaaagcttggtatcgatttcttgaaggtaagtttctcttcgatgatttacttgtttgaatttgtgttag 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1985766 aattttgtggttcagtgccaagggatacgttgaaagcttggtatcgatttcttgaaggtaagtttctcttcgatgatttacttgtttgaatttgtgttag 1985667  T
Q  116 tttgtgtatgtgtacaatatattgtgtgattattttcaaatcatggttttatttgataatcattttgccctcaagtttaattattatttgttttgtattg 215  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||    
T  1985666 tttgtgtatgtatacaatatattgtgtgattattttcaaatcatggttttatttgataatcattttgccctcaagtttaat---tatttgttttgtattg 1985570  T
Q  216 agtttaaatattggccacaatgcactttgatgtgtat-ggtacaatggtataagtttctaagctgttgctataattaatagttcagtagcatccattgct 314  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  1985569 agtttaaatattggcaacaatgcactttgatgtgtatgggtacaatggtataagtttctaagctgttgctataactaatagttcaatagcatccattgct 1985470  T
Q  315 agaatgcacacattatttacagcatagatgtacgtatagcagcctttgc 363  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  1985469 agaatgcacacattatttacagcatagatgtacctatagcagcctttgc 1985421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 114
Target Start/End: Original strand, 14076931 - 14077001
Alignment:
Q  44 gttgaaagcttggtatcgatttcttgaaggtaagtttctcttcgatgatttacttgtttgaatttgtgtta 114  Q
    ||||||||||||||||||| || | ||| ||||||| |||||||||||||||| ||||||||| |||||||    
T  14076931 gttgaaagcttggtatcgacttttagaaagtaagttcctcttcgatgatttacatgtttgaatctgtgtta 14077001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 114
Target Start/End: Original strand, 14386959 - 14387029
Alignment:
Q  44 gttgaaagcttggtatcgatttcttgaaggtaagtttctcttcgatgatttacttgtttgaatttgtgtta 114  Q
    ||||||||||||||||||| || | ||| ||||||| |||||||||||||||| ||||||||| |||||||    
T  14386959 gttgaaagcttggtatcgacttttagaaagtaagttcctcttcgatgatttacatgtttgaatctgtgtta 14387029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 89 - 165
Target Start/End: Complemental strand, 18514557 - 18514481
Alignment:
Q  89 tgatttacttgtttgaatttgtgttagtttgtgtatgtgtacaatatattgtgtgattattttcaaatcatggtttt 165  Q
    ||||||||||||||||||||| ||||  | ||||  ||||||||| ||| |||| |||||||||| |||||||||||    
T  18514557 tgatttacttgtttgaatttgagttaaatcgtgtccgtgtacaatgtatcgtgtcattattttcatatcatggtttt 18514481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 93
Target Start/End: Complemental strand, 15571694 - 15571632
Alignment:
Q  31 tgccaagggatacgttgaaagcttggtatcgatttcttgaaggtaagtttctcttcgatgatt 93  Q
    ||||| |||||| ||||||||||||||||||| ||| |||| |||||||| | ||||||||||    
T  15571694 tgccaggggatatgttgaaagcttggtatcgacttcctgaaagtaagtttttgttcgatgatt 15571632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 46 - 113
Target Start/End: Original strand, 22064361 - 22064428
Alignment:
Q  46 tgaaagcttggtatcgatttcttgaaggtaagtttctcttcgatgatttacttgtttgaatttgtgtt 113  Q
    |||||| ||||| |||  || ||||| |||||||||| | ||| ||||||||||||||||||||||||    
T  22064361 tgaaaggttggtttcgtattgttgaaagtaagtttctttacgacgatttacttgtttgaatttgtgtt 22064428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 108
Target Start/End: Complemental strand, 19350867 - 19350803
Alignment:
Q  44 gttgaaagcttggtatcgatttcttgaaggtaagtttctcttcgatgatttacttgtttgaattt 108  Q
    ||||||||||| || || |  ||||||| |||||||||||||  |||||||| ||||||||||||    
T  19350867 gttgaaagcttagtttcaacctcttgaaagtaagtttctctttaatgatttaattgtttgaattt 19350803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 67 - 111
Target Start/End: Original strand, 22063928 - 22063972
Alignment:
Q  67 ttgaaggtaagtttctcttcgatgatttacttgtttgaatttgtg 111  Q
    ||||| ||||||| |||| | ||||||||||||||||||||||||    
T  22063928 ttgaaagtaagttcctctacaatgatttacttgtttgaatttgtg 22063972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 113
Target Start/End: Complemental strand, 29476077 - 29476009
Alignment:
Q  45 ttgaaagcttggtatcgatttcttgaaggtaagtttctcttcgatgatttacttgtttgaatttgtgtt 113  Q
    |||||||||| || || |||| ||||| |||||||||||||  ||  ||||||||||||||||| ||||    
T  29476077 ttgaaagcttagtttcaattttttgaaagtaagtttctcttttatagtttacttgtttgaatttatgtt 29476009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 169; Significance: 1e-90; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 16 - 350
Target Start/End: Complemental strand, 6947643 - 6947329
Alignment:
Q  16 aattttgtggttcagtgccaagggatacgttgaaagcttggtatcgatttcttgaaggtaagtttctcttcgatgatttacttgtttgaatttgtgttag 115  Q
    ||||||||||||||||||||| ||||| ||||||||||||| |||||| | ||||||||||||||||||| ||||||||||||||||| ||||| |||||    
T  6947643 aattttgtggttcagtgccaatggatatgttgaaagcttggcatcgatattttgaaggtaagtttctcttggatgatttacttgtttgtatttgagttag 6947544  T
Q  116 tttgtgtatg-tgtacaatatattgtgtgattattttcaaatcatggttttatttgataatcattttgccctcaagtttaattattatttgttttgtatt 214  Q
    ||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||| |    ||     
T  6947543 tttatgtatgatgtacaatatattgtgtgattattttcaaatcatggttttatttgataatcattttgccctcaagt-------ttatttgata---atc 6947454  T
Q  215 gagtttaaatattggccacaatgcactttgatgtgtatggtacaatggtataagtttctaagctgttgctataattaatagttcagtagcatccattgct 314  Q
            |||||||  |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||| ||||||||||    
T  6947453 --------atattggtaacaatgaactttgatgtgtatggtacaatggtataagtttctaagctgatgctataattagtagttcaatagtatccattgct 6947362  T
Q  315 agaatgcacacattatttacagcatagatgtacgta 350  Q
    |||||||||||   ||||||||||||||||||||||    
T  6947361 agaatgcacac---atttacagcatagatgtacgta 6947329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 19 - 246
Target Start/End: Complemental strand, 6935041 - 6934824
Alignment:
Q  19 tttgtggttcagtgccaagggatacgttgaaagcttggtatcgatttcttgaaggtaagtttctcttcgatgatttacttgtttgaatttgtgttagttt 118  Q
    |||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  6935041 tttgtggttcagtgccaagggatatgttgaaagtttggtatcgacttcttgaaggtaattttctcttcaatgatttacttgtttgaatttgtgttagttt 6934942  T
Q  119 gtgtatgtgtacaatatattgtgtgattattttcaaatcatggttttatttgataatcattttgccctcaagtttaattattatttgttttgtattgagt 218  Q
     ||   ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||       ||||||||||||| ||| ||    
T  6934941 atg---gtgtacaatatattgtgtgattattttcaaatcatggttttatttgataatcagttttccctcaagt-------ttatttgttttgtcttgcgt 6934852  T
Q  219 ttaaatattggccacaatgcactttgat 246  Q
    |||||||||||  |||||| ||||||||    
T  6934851 ttaaatattggtaacaatgaactttgat 6934824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 6921161 - 6921033
Alignment:
Q  16 aattttgtggttcagtgccaagggatacgttgaaagcttggtatcgatttcttgaaggtaagtttctcttcgatgatttacttgtttgaatttgtgttag 115  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||| |||||||| |||||||| | ||||||||||||||||||||||||||||||||    
T  6921161 aattttgtggttcactgccaagggatatgttgaaagcttggtatcgacttcttgaaagtaagtttttgttcgatgatttacttgtttgaatttgtgttag 6921062  T
Q  116 tttgtgtatgtgtacaatatattgtgtgat 145  Q
     ||||||||| ||||||| |||| ||||||    
T  6921061 cttgtgtatg-gtacaatgtattttgtgat 6921033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 31 - 165
Target Start/End: Complemental strand, 6954315 - 6954181
Alignment:
Q  31 tgccaagggatacgttgaaagcttggtatcgatttcttgaaggtaagtttctctt-cgatgatttacttgtttgaatttgtgttagtttgtgtatgtgta 129  Q
    |||||||||||| ||||||||||||||||||| |||||||| ||| |||| | || |||||||||||||||||||||||||||||| |||| |||| |||    
T  6954315 tgccaagggatatgttgaaagcttggtatcgacttcttgaaagtatgttttttttccgatgatttacttgtttgaatttgtgttagcttgtctatg-gta 6954217  T
Q  130 caatatattgtgtgattattttcaaatcatggtttt 165  Q
    |||| |||| |||||||||||||| | |||||||||    
T  6954216 caatgtattttgtgattattttcataccatggtttt 6954181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 165
Target Start/End: Complemental strand, 6942778 - 6942623
Alignment:
Q  16 aattttgtggttcagtgccaagggatacgttgaaagcttggtatcgatttcttgaaggtaagtttctcttcgatgatttactt-------gtttgaattt 108  Q
    ||||| ||||| || |||||||||||| ||||||||||||||||| | |||||||| |||||||| | || ||| |||| | |        |||||||||    
T  6942778 aatttggtggtccactgccaagggatatgttgaaagcttggtatcaacttcttgaaagtaagtttttgtttgattatttccatatcatggttttgaattt 6942679  T
Q  109 gtgttagtttgtgtatgtgtacaatatattgtgtgattattttcaaatcatggtttt 165  Q
    ||||||| ||||||||| ||| ||| |||| ||||||||||| || |||||||||||    
T  6942678 gtgttagcttgtgtatg-gtagaatgtattttgtgattatttccatatcatggtttt 6942623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 53 - 114
Target Start/End: Original strand, 20770921 - 20770982
Alignment:
Q  53 ttggtatcgatttcttgaaggtaagtttctcttcgatgatttacttgtttgaatttgtgtta 114  Q
    ||||||||||  | ||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  20770921 ttggtatcgacctgttgaaagtaagttcctcttcgatgatttacttgtttgaatttgtgtta 20770982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 240 - 303
Target Start/End: Complemental strand, 6934776 - 6934713
Alignment:
Q  240 ctttgatgtgtatggtacaatggtataagtttctaagctgttgctataattaatagttcagtag 303  Q
    |||| ||||||||||||||||||||||| ||||||||||  ||| | |||||||||||||||||    
T  6934776 cttttatgtgtatggtacaatggtataaatttctaagctcatgccaaaattaatagttcagtag 6934713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 17369931 - 17369996
Alignment:
Q  33 ccaagggatacgttgaaagcttggtatcgatttcttgaaggtaagtttctcttcgatgatttactt 98  Q
    ||||||| || ||||||||||||||||| | || ||||| ||||||| ||||||||||||||||||    
T  17369931 ccaagggctatgttgaaagcttggtatctacttgttgaaagtaagttactcttcgatgatttactt 17369996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 350
Target Start/End: Complemental strand, 6942557 - 6942472
Alignment:
Q  264 ataagtttctaagctgttgctataattaatagttcagtagcatccattgctagaatgcacacattatttacagcatagatgtacgta 350  Q
    |||| ||||||||||  ||  ||| ||||||||||| ||||||||||||||||||||||| | ||  ||||||||| ||||||||||    
T  6942557 ataaatttctaagctcatgacatatttaatagttcaatagcatccattgctagaatgcac-cctttgttacagcatcgatgtacgta 6942472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0354 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0354
Description:

Target: scaffold0354; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 22 - 123
Target Start/End: Original strand, 7725 - 7825
Alignment:
Q  22 gtggttcagtgccaagggatacgttgaaagcttggtatcgatttcttgaaggtaagtttctcttcgatgatttacttgtttgaatttgtgttagtttgtg 121  Q
    |||||||| |||||||||||| || |||||||||||| ||| |||||||||||| |||| |  ||||| |||||||||||||||||| ||||||||||||    
T  7725 gtggttcaatgccaagggatatgtagaaagcttggtaccgacttcttgaaggtatgttt-tgctcgatcatttacttgtttgaatttttgttagtttgtg 7823  T
Q  122 ta 123  Q
    ||    
T  7824 ta 7825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 44 - 114
Target Start/End: Original strand, 53775104 - 53775174
Alignment:
Q  44 gttgaaagcttggtatcgatttcttgaaggtaagtttctcttcgatgatttacttgtttgaatttgtgtta 114  Q
    ||||||||||||||||| |  | ||||| ||||||| |||||| | |||||||||||||||||||||||||    
T  53775104 gttgaaagcttggtatcaacgtgttgaaagtaagttcctcttccaagatttacttgtttgaatttgtgtta 53775174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 11981490 - 11981422
Alignment:
Q  44 gttgaaagcttggtatcgatttcttgaaggtaagtttctcttcgatgatttacttgtttgaatttgtgt 112  Q
    |||||||||||||| |||  || ||||| |||||||||||| | |  ||||||||||||||||||||||    
T  11981490 gttgaaagcttggtttcgtattgttgaaagtaagtttctctacaacaatttacttgtttgaatttgtgt 11981422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 44 - 111
Target Start/End: Complemental strand, 11970789 - 11970722
Alignment:
Q  44 gttgaaagcttggtatcgatttcttgaaggtaagtttctcttcgatgatttacttgtttgaatttgtg 111  Q
    |||||||||||||| | |  || ||||| |||||||||||| |||  |||||||||||||||||||||    
T  11970789 gttgaaagcttggttttgtattgttgaaagtaagtttctctacgacaatttacttgtttgaatttgtg 11970722  T

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Target: chr2 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 18913322 - 18913265
Alignment:
Q  44 gttgaaagcttggtatcgatttcttgaaggtaagtttctcttcgatgatttacttgtt 101  Q
    ||||||||||||||||| |  ||||||| |||||||||||||| |||||||| |||||    
T  18913322 gttgaaagcttggtatcaacctcttgaaagtaagtttctcttcaatgatttaattgtt 18913265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 18908574 - 18908517
Alignment:
Q  44 gttgaaagcttggtatcgatttcttgaaggtaagtttctcttcgatgatttacttgtt 101  Q
    |||||||||||||| || |  ||||||| |||||||| |||||||||||||| |||||    
T  18908574 gttgaaagcttggtttcaacctcttgaaagtaagtttttcttcgatgatttaattgtt 18908517  T

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Target: chr8 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 105
Target Start/End: Original strand, 27618730 - 27618791
Alignment:
Q  44 gttgaaagcttggtatcgatttcttgaaggtaagtttctcttcgatgatttacttgtttgaa 105  Q
    |||||||||||||| || |||||||||| ||||||| || || || || |||||||||||||    
T  27618730 gttgaaagcttggtttcaatttcttgaaagtaagttcctatttgacgaattacttgtttgaa 27618791  T

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Target: chr5 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 102
Target Start/End: Complemental strand, 18964630 - 18964561
Alignment:
Q  33 ccaagggatacgttgaaagcttggtatcgatttcttgaaggtaagtttctcttcgatgatttacttgttt 102  Q
    ||||||| || |||||||||||| |||| | || ||||| ||||||| ||||| ||||| ||||||||||    
T  18964630 ccaagggctatgttgaaagcttgatatctacttgttgaaagtaagttcctctttgatgacttacttgttt 18964561  T

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Target: chr1 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 100
Target Start/End: Original strand, 15961464 - 15961541
Alignment:
Q  23 tggttcagtgccaagggatacgttgaaagcttggtatcgatttcttgaaggtaagtttctcttcgatgatttacttgt 100  Q
    ||||||| || |||||| ||||||||||||||||| ||   || ||||| |||||||||||| | | |||||||||||    
T  15961464 tggttcaatgacaagggttacgttgaaagcttggtttcatattgttgaaagtaagtttctctacaacgatttacttgt 15961541  T

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