View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16841_low_13 (Length: 270)
Name: NF16841_low_13
Description: NF16841
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16841_low_13 |
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Alignment Details
Target: chr3 (Bit Score: 170; Significance: 3e-91; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 66 - 251
Target Start/End: Complemental strand, 34547577 - 34547392
Alignment:
| Q |
66 |
aacaagagacaaatcgatgtttgtcggaatgatatctatttgtctcttatctaccggtatttttctattgaaatgacgcgccaatttggtcacataacat |
165 |
Q |
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| T |
34547577 |
aacaagagataaatagatgtttgtcggaatgatatctatttgtctcttatttaccggtatttttctattgaaatgacgcgccaatttggtcacataacat |
34547478 |
T |
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| Q |
166 |
gcaaagaacaatgaaccacattgtttttgcacaacctcttttccctccaccatatcatctttttagcaattgttggctgtagtcag |
251 |
Q |
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| T |
34547477 |
gcaaagaacaatgaaccacattgtttttgcacaacctcttttccctccaccatatcttctttttagcaattgttggctgtagtcag |
34547392 |
T |
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