View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16841_low_19 (Length: 201)

Name: NF16841_low_19
Description: NF16841
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16841_low_19
NF16841_low_19
[»] chr4 (24 HSPs)
chr4 (87-201)||(52712990-52713104)
chr4 (6-66)||(37827469-37827529)
chr4 (85-134)||(5222444-5222493)
chr4 (87-201)||(37788378-37788492)
chr4 (87-201)||(50768372-50768486)
chr4 (87-201)||(53677558-53677672)
chr4 (86-200)||(55937783-55937897)
chr4 (86-201)||(9798154-9798269)
chr4 (86-201)||(43980424-43980539)
chr4 (87-201)||(32012406-32012520)
chr4 (90-201)||(29899645-29899756)
chr4 (87-201)||(3043246-3043360)
chr4 (87-201)||(30776563-30776677)
chr4 (87-201)||(30777414-30777528)
chr4 (87-201)||(38940796-38940910)
chr4 (87-201)||(39970068-39970182)
chr4 (87-137)||(30012096-30012146)
chr4 (98-201)||(49901965-49902068)
chr4 (87-201)||(10591582-10591695)
chr4 (87-201)||(29180491-29180605)
chr4 (87-201)||(38187805-38187919)
chr4 (85-201)||(51495077-51495190)
chr4 (87-201)||(27750427-27750541)
chr4 (87-201)||(1619956-1620070)
[»] chr8 (22 HSPs)
chr8 (87-201)||(35259990-35260104)
chr8 (87-201)||(24612594-24612708)
chr8 (90-201)||(27621066-27621177)
chr8 (87-201)||(25321700-25321814)
chr8 (87-201)||(27752519-27752633)
chr8 (87-201)||(3099885-3100000)
chr8 (87-201)||(44052553-44052668)
chr8 (87-201)||(35344299-35344414)
chr8 (87-201)||(37598003-37598117)
chr8 (87-201)||(33851137-33851251)
chr8 (87-201)||(36537991-36538105)
chr8 (87-146)||(35346472-35346532)
chr8 (87-134)||(11043990-11044037)
chr8 (85-135)||(16635638-16635688)
chr8 (86-201)||(32678623-32678738)
chr8 (98-201)||(39187177-39187280)
chr8 (98-201)||(44411323-44411426)
chr8 (86-198)||(11992659-11992772)
chr8 (85-134)||(16635370-16635419)
chr8 (85-132)||(16635506-16635553)
chr8 (87-134)||(31133765-31133812)
chr8 (98-201)||(37567545-37567648)
[»] chr2 (19 HSPs)
chr2 (87-201)||(28424204-28424318)
chr2 (87-201)||(5091652-5091768)
chr2 (87-201)||(8784325-8784439)
chr2 (87-201)||(29514131-29514245)
chr2 (87-201)||(33635266-33635380)
chr2 (87-201)||(14565485-14565600)
chr2 (87-201)||(792468-792582)
chr2 (87-201)||(21539687-21539801)
chr2 (87-201)||(43075680-43075794)
chr2 (87-201)||(29514587-29514700)
chr2 (87-146)||(15858776-15858836)
chr2 (86-145)||(28492449-28492509)
chr2 (87-201)||(4033787-4033901)
chr2 (87-201)||(35832342-35832456)
chr2 (85-201)||(22162247-22162364)
chr2 (87-146)||(38549809-38549869)
chr2 (87-201)||(44803829-44803942)
chr2 (87-134)||(18834091-18834138)
chr2 (98-146)||(10979132-10979181)
[»] chr1 (27 HSPs)
chr1 (87-201)||(28916631-28916745)
chr1 (87-201)||(44875109-44875223)
chr1 (87-201)||(46949251-46949365)
chr1 (87-201)||(23873943-23874057)
chr1 (87-201)||(25990678-25990792)
chr1 (87-201)||(26907205-26907319)
chr1 (87-201)||(49924349-49924463)
chr1 (86-201)||(47996883-47996998)
chr1 (87-201)||(28017588-28017702)
chr1 (87-201)||(40960590-40960704)
chr1 (87-201)||(18036475-18036588)
chr1 (87-201)||(29488678-29488792)
chr1 (87-201)||(38942557-38942671)
chr1 (87-146)||(9127973-9128033)
chr1 (86-145)||(35884151-35884211)
chr1 (87-198)||(15285734-15285845)
chr1 (87-201)||(39026362-39026476)
chr1 (87-201)||(35941771-35941885)
chr1 (87-201)||(40219987-40220100)
chr1 (87-134)||(4529117-4529164)
chr1 (87-134)||(35189130-35189177)
chr1 (87-201)||(45357992-45358106)
chr1 (87-134)||(36383858-36383905)
chr1 (85-122)||(1820327-1820364)
chr1 (85-122)||(47026406-47026443)
chr1 (156-196)||(3861812-3861851)
chr1 (87-146)||(26479669-26479729)
[»] chr7 (28 HSPs)
chr7 (89-201)||(35181123-35181235)
chr7 (86-201)||(48879316-48879431)
chr7 (87-201)||(43107976-43108091)
chr7 (87-201)||(23731489-23731603)
chr7 (87-201)||(45598833-45598947)
chr7 (87-197)||(21654196-21654306)
chr7 (98-201)||(23106393-23106496)
chr7 (86-201)||(34808147-34808262)
chr7 (87-198)||(36576347-36576458)
chr7 (87-201)||(19933126-19933240)
chr7 (87-201)||(19964265-19964379)
chr7 (87-134)||(7989428-7989475)
chr7 (87-198)||(32491181-32491291)
chr7 (87-201)||(40583074-40583188)
chr7 (87-201)||(3157365-3157479)
chr7 (88-201)||(22111401-22111514)
chr7 (87-201)||(47383335-47383449)
chr7 (87-146)||(44600375-44600435)
chr7 (87-134)||(41815831-41815878)
chr7 (87-201)||(39348718-39348832)
chr7 (87-201)||(40560311-40560425)
chr7 (87-201)||(41889100-41889214)
chr7 (87-146)||(9818410-9818468)
chr7 (87-146)||(10720335-10720393)
chr7 (158-201)||(18206390-18206433)
chr7 (87-201)||(42617600-42617714)
chr7 (85-127)||(48341575-48341617)
chr7 (87-128)||(41890404-41890445)
[»] chr3 (23 HSPs)
chr3 (87-201)||(53020113-53020228)
chr3 (87-201)||(46580467-46580581)
chr3 (87-201)||(21654175-21654290)
chr3 (87-201)||(23513498-23513612)
chr3 (87-201)||(26641187-26641301)
chr3 (87-201)||(46819980-46820094)
chr3 (87-201)||(43575889-43576002)
chr3 (85-201)||(46296152-46296268)
chr3 (87-201)||(28793092-28793207)
chr3 (87-201)||(31126143-31126257)
chr3 (86-201)||(51426547-51426664)
chr3 (87-201)||(1335041-1335155)
chr3 (87-201)||(55400669-55400783)
chr3 (87-146)||(16739284-16739344)
chr3 (87-201)||(51255119-51255231)
chr3 (87-201)||(13541208-13541322)
chr3 (87-146)||(45781328-45781388)
chr3 (86-134)||(37324230-37324278)
chr3 (87-134)||(36189149-36189196)
chr3 (87-130)||(45347814-45347857)
chr3 (87-201)||(32322314-32322428)
chr3 (87-146)||(34022552-34022612)
chr3 (158-198)||(40936390-40936430)
[»] scaffold0495 (1 HSPs)
scaffold0495 (87-201)||(4561-4674)
[»] chr6 (8 HSPs)
chr6 (87-201)||(10227842-10227956)
chr6 (87-201)||(374029-374143)
chr6 (87-201)||(17721922-17722036)
chr6 (87-201)||(30949065-30949179)
chr6 (87-201)||(12278636-12278750)
chr6 (87-145)||(33756186-33756245)
chr6 (91-201)||(31887234-31887345)
chr6 (87-143)||(17598223-17598280)
[»] chr5 (15 HSPs)
chr5 (87-201)||(31690733-31690847)
chr5 (86-201)||(8146126-8146241)
chr5 (86-201)||(20914790-20914905)
chr5 (86-201)||(8541677-8541792)
chr5 (87-201)||(30086661-30086775)
chr5 (87-201)||(35462831-35462945)
chr5 (87-146)||(13146661-13146721)
chr5 (87-201)||(16286196-16286310)
chr5 (87-201)||(24432513-24432627)
chr5 (87-201)||(24439504-24439618)
chr5 (85-201)||(31316914-31317030)
chr5 (87-201)||(12638822-12638935)
chr5 (89-134)||(8143868-8143913)
chr5 (87-146)||(25962619-25962679)
chr5 (87-128)||(32433587-32433628)


Alignment Details
Target: chr4 (Bit Score: 58; Significance: 1e-24; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 52712990 - 52713104
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||       ||| |||||||||||||| |||  ||||||||    
T  52712990 aaaatataagtaaaaaagaccaatttttatgctattattatgttttttcaaacaaatcatc-ttttccaatgtaaaattaaatgcaaattgcatttaatt 52713088  T
Q  186 tgttctcctttttatt 201  Q
    ||||||||||||||||    
T  52713089 tgttctcctttttatt 52713104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 6 - 66
Target Start/End: Original strand, 37827469 - 37827529
Alignment:
Q  6 gatgatcaagtcgtgaggtagatacagcttttgattctccatacggctttgtttttcttag 66  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  37827469 gatgatcaagttgtgaggtagatacagcttttgattctccatacggctttgtttttcttag 37827529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 85 - 134
Target Start/End: Complemental strand, 5222493 - 5222444
Alignment:
Q  85 ctaaaatataagtaaaaaagaccaacttttatactattattatgtttttt 134  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5222493 ctaaaatataagtaaaaaagaccaacttttatactattattatgtttttt 5222444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 37788378 - 37788492
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||       ||| ||||||||||||||  ||  ||||||||    
T  37788378 aaaatataagtaaaaaagaccaacttttatgctatttttatgttttttcaaacaaatcatc-ttttccaatgtaaaattaaatgcaacttgcatttaatt 37788476  T
Q  186 tgttctcctttttatt 201  Q
    ||||||| ||||||||    
T  37788477 tgttctcttttttatt 37788492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 50768372 - 50768486
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||| ||||||||||||||||||| ||||| ||||||||||| ||||||||||||       ||| ||||||||||||||  ||  ||||||||    
T  50768372 aaaatataagcaaaaaagaccaacttttatgctatttttatgttttttcaaacaaatcatc-ttttccaatgtaaaattaaatgcaagttgcatttaatt 50768470  T
Q  186 tgttctcctttttatt 201  Q
    ||||||||||||||||    
T  50768471 tgttctcctttttatt 50768486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 53677672 - 53677558
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||| |||||| |||||||||||| ||||||||||||||||| ||||||||||||       ||| |||||||||||||| |||  ||| ||||    
T  53677672 aaaatataagcaaaaaaaaccaacttttatgctattattatgttttttcaaacaaatcatc-ttttccaatgtaaaattaaatgcaaattgcattcaatt 53677574  T
Q  186 tgttctcctttttatt 201  Q
    ||||||||||||||||    
T  53677573 tgttctcctttttatt 53677558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 86 - 200
Target Start/End: Complemental strand, 55937897 - 55937783
Alignment:
Q  86 taaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaat 184  Q
    ||||||||||| |||||||||||||||||||  |||| ||||||||||| ||||||||||||       ||| ||||||||||||||  || ||||||||    
T  55937897 taaaatataagcaaaaaagaccaacttttatgatatttttatgttttttcaaacaaatcatc-ttttccaatgtaaaattaaatgcaagttgtatttaat 55937799  T
Q  185 ttgttctcctttttat 200  Q
    ||||||||||||||||    
T  55937798 ttgttctcctttttat 55937783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 86 - 201
Target Start/End: Complemental strand, 9798269 - 9798154
Alignment:
Q  86 taaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaat 184  Q
    ||||||||||| |||||||| |||||||||| ||||||||||||||||| ||||||||||||       ||| |||||||||||||| |||  ||| |||    
T  9798269 taaaatataagcaaaaaagatcaacttttatgctattattatgttttttcaaacaaatcatc-ttttccaatgtaaaattaaatgcaaattggattcaat 9798171  T
Q  185 ttgttctcctttttatt 201  Q
     ||||||||||||||||    
T  9798170 gtgttctcctttttatt 9798154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 86 - 201
Target Start/End: Original strand, 43980424 - 43980539
Alignment:
Q  86 taaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaat 184  Q
    |||||||||||||||||| |||||||||||| |||||||||| |||||| ||||||||||||       ||| |||||||||||||| |||  ||| |||    
T  43980424 taaaatataagtaaaaaataccaacttttatgctattattatattttttcaaacaaatcatc-ttttccaatgtaaaattaaatgcaaattgcattcaat 43980522  T
Q  185 ttgttctcctttttatt 201  Q
     ||||||||||||||||    
T  43980523 gtgttctcctttttatt 43980539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 32012520 - 32012406
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||| ||||||||| ||||||||| ||||||||||||||||| ||||||||||||       ||| |||||||||||||| |||  ||| ||||    
T  32012520 aaaatataagcaaaaaagacaaacttttatgctattattatgttttttcaaacaaatcatc-tttttcaatgtaaaattaaatgcaaattgcattcaatt 32012422  T
Q  186 tgttctcctttttatt 201  Q
    | ||||||||||||||    
T  32012421 tattctcctttttatt 32012406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 90 - 201
Target Start/End: Original strand, 29899645 - 29899756
Alignment:
Q  90 atataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatttgt 188  Q
    ||||||| ||||||||||||||||||| ||||| ||||||||||| ||||||||||||       ||| ||||||||||||||  ||  |||||||||||    
T  29899645 atataagcaaaaaagaccaacttttatgctatttttatgttttttcaaacaaatcatc-ttttccaatgtaaaattaaatgcaagttgcatttaatttgt 29899743  T
Q  189 tctcctttttatt 201  Q
    || ||||||||||    
T  29899744 tcacctttttatt 29899756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 3043360 - 3043246
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    ||||||||||  ||||||| |||||||||| ||||||||||||||||| ||||||||||||       ||| |||||||||||||| |||  ||| |||     
T  3043360 aaaatataagcgaaaaagatcaacttttatgctattattatgttttttcaaacaaatcatc-ttttccaatgtaaaattaaatgcaaattgcattcaatg 3043262  T
Q  186 tgttctcctttttatt 201  Q
    ||||||||||||||||    
T  3043261 tgttctcctttttatt 3043246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 30776677 - 30776563
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||| |||||||||||||||||||  |||||||||||||||| ||| |||| |||       ||| |||||||||||||| |||  ||| ||||    
T  30776677 aaaatataagcaaaaaagaccaacttttatgttattattatgttttttcaaagaaattatc-ttttccaatgtaaaattaaatgcaaattgcattcaatt 30776579  T
Q  186 tgttctcctttttatt 201  Q
    ||||||||||||||||    
T  30776578 tgttctcctttttatt 30776563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 30777414 - 30777528
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||| |||||||||||||||||||  |||||||||||||||| ||| |||| |||       ||| |||||||||||||| |||  ||| ||||    
T  30777414 aaaatataagcaaaaaagaccaacttttatgttattattatgttttttcaaagaaattatc-ttttccaatgtaaaattaaatgcaaattgcattcaatt 30777512  T
Q  186 tgttctcctttttatt 201  Q
    ||||||||||||||||    
T  30777513 tgttctcctttttatt 30777528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 38940796 - 38940910
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||| |||||| |||||||||||| ||||||||||||||||| ||||||||||||       ||| |||||||||||||| |||  ||| ||||    
T  38940796 aaaatataagcaaaaaataccaacttttatgctattattatgttttttcaaacaaatcatc-ttttccaatgtaaaattaaatgcaaattgcattcaatt 38940894  T
Q  186 tgttctcctttttatt 201  Q
    | |||| |||||||||    
T  38940895 tattcttctttttatt 38940910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 39970182 - 39970068
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||| ||||||||| || |||||| ||||||||||||||||| || |||||||||       ||| |||||||||||||| |||  ||| ||||    
T  39970182 aaaatataagcaaaaaagactaatttttatgctattattatgttttttcaaccaaatcatc-ttttccaatgtaaaattaaatgcaaattgcattcaatt 39970084  T
Q  186 tgttctcctttttatt 201  Q
    ||||||||||||||||    
T  39970083 tgttctcctttttatt 39970068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 30012146 - 30012096
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgttttttaaa 137  Q
    |||||||||| |||||||| |||||||||| ||||||||||||||||||||    
T  30012146 aaaatataagcaaaaaagatcaacttttattctattattatgttttttaaa 30012096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 201
Target Start/End: Original strand, 49901965 - 49902068
Alignment:
Q  98 aaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatttgttctccttt 196  Q
    |||||| || |||||||||  |||||||||||||||| ||||||||||||       |||||||||||||||||| |||  ||| |||||||||||||||    
T  49901965 aaaaaaaacaaacttttatgttattattatgttttttcaaacaaatcatcttttcc-aatataaaattaaatgcaaattgcattcaatttgttctccttt 49902063  T
Q  197 ttatt 201  Q
    |||||    
T  49902064 ttatt 49902068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 10591695 - 10591582
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||| ||||||||| || |||||| ||||||||||||||||| ||||||||||||       ||| |||||||||||||| |||  ||| ||||    
T  10591695 aaaatataag-aaaaaagactaatttttatgctattattatgttttttcaaacaaatcatc-ttttccaatgtaaaattaaatgcaaattgcattcaatt 10591598  T
Q  186 tgttctcctttttatt 201  Q
     |||||||||||||||    
T  10591597 ggttctcctttttatt 10591582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 29180605 - 29180491
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||| ||||||||| |||||||||  |||||||||||||||| ||| |||| |||       ||| |||||||||||||| |||  ||| ||||    
T  29180605 aaaatataagcaaaaaagacaaacttttatgttattattatgttttttcaaagaaattatc-ttttccaatgtaaaattaaatgcaaattgcattcaatt 29180507  T
Q  186 tgttctcctttttatt 201  Q
    ||||||||||||||||    
T  29180506 tgttctcctttttatt 29180491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 38187919 - 38187805
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgt-tttttaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    ||||||||||||||||||| |||||||||| |||||| ||||| |||| ||||||||||||       ||| ||||||||||||||  ||  ||| ||||    
T  38187919 aaaatataagtaaaaaagatcaacttttatgctattagtatgtattttcaaacaaatcatc-ttttccaatgtaaaattaaatgcaagttgcattcaatt 38187821  T
Q  186 tgttctcctttttatt 201  Q
    ||||||| ||||||||    
T  38187820 tgttctcttttttatt 38187805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 51495077 - 51495190
Alignment:
Q  85 ctaaaatataagtaaaaaagaccaacttttatactattattatgttttttaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaat 184  Q
    |||||||||||| |||||||| |||||||||| |||||||    ||||||||||||||||||       ||| |||||||||||||| |||  ||| |||    
T  51495077 ctaaaatataagcaaaaaagatcaacttttatgctattat--gtttttttaaacaaatcatc-ttttccaatgtaaaattaaatgcaaattgcattcaat 51495173  T
Q  185 ttgttctcctttttatt 201  Q
    || ||||||||||||||    
T  51495174 ttattctcctttttatt 51495190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 27750541 - 27750427
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtt-ttttaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||| | || |||||||||||||| ||||| ||||||| ||| ||||||||||||       ||| ||||||||||||||  ||  ||||||||    
T  27750541 aaaatataagcataacagaccaacttttatgctatttttatgttatttcaaacaaatcatc-ttttccaatgtaaaattaaatgcaagttgcatttaatt 27750443  T
Q  186 tgttctcctttttatt 201  Q
    |||||| |||||||||    
T  27750442 tgttcttctttttatt 27750427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 1619956 - 1620070
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||  | |||| |||||||||||| |||||||||| |||||| ||||||||||||       ||| ||||||||||||||  ||  ||| ||||    
T  1619956 aaaatataatcataaaacaccaacttttatgctattattatattttttcaaacaaatcatc-tttttcaatgtaaaattaaatgcaatttgcattcaatt 1620054  T
Q  186 tgttctcctttttatt 201  Q
    |||||| |||||||||    
T  1620055 tgttcttctttttatt 1620070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 3e-22; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 35259990 - 35260104
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||       ||| |||||||||||||| |||  ||| ||||    
T  35259990 aaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatc-ttttccaatgtaaaattaaatgcaaattccattcaatt 35260088  T
Q  186 tgttctcctttttatt 201  Q
    ||||||||||||||||    
T  35260089 tgttctcctttttatt 35260104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 24612708 - 24612594
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||       ||| ||||||||||||||  ||  ||| ||||    
T  24612708 aaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatc-tttttcaatgtaaaattaaatgcaagttgcattcaatt 24612610  T
Q  186 tgttctcctttttatt 201  Q
    ||||||||||||||||    
T  24612609 tgttctcctttttatt 24612594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 90 - 201
Target Start/End: Original strand, 27621066 - 27621177
Alignment:
Q  90 atataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatttgt 188  Q
    ||||||| ||||||||| ||||||||| ||||||||||||||||| ||||||||||||       ||| |||||||||||||| |||  ||| |||||||    
T  27621066 atataagcaaaaaagacaaacttttatgctattattatgttttttcaaacaaatcatc-ttttccaatgtaaaattaaatgcaaattgcattcaatttgt 27621164  T
Q  189 tctcctttttatt 201  Q
    |||||||||||||    
T  27621165 tctcctttttatt 27621177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 25321814 - 25321700
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||| ||||||||||||||||||| ||||| ||||||||||| ||||||||||||       ||| ||||||||||||||  ||  ||||||||    
T  25321814 aaaatataagcaaaaaagaccaacttttatgctatttttatgttttttcaaacaaatcatc-ttttccaatgtaaaattaaatgcaagttgcatttaatt 25321716  T
Q  186 tgttctcctttttatt 201  Q
    || |||||||||||||    
T  25321715 tgctctcctttttatt 25321700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 27752519 - 27752633
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||  ||||||||||||||||||| ||||| ||||||||||| ||||||||||||       ||| ||||||||||||||  ||  ||||||||    
T  27752519 aaaatataaacaaaaaagaccaacttttatgctatttttatgttttttcaaacaaatcatc-ttttccaatgtaaaattaaatgcaagttgcatttaatt 27752617  T
Q  186 tgttctcctttttatt 201  Q
    ||||||||||||||||    
T  27752618 tgttctcctttttatt 27752633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 3099885 - 3100000
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt--aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaat 184  Q
    |||||||||| ||||||||| | ||||||| |||||||||||||||||  ||||||||||||       ||| |||||||||||||| |||  ||| |||    
T  3099885 aaaatataagcaaaaaagacaatcttttatgctattattatgtttttttcaaacaaatcatc-ttttccaatgtaaaattaaatgcaaattgcattcaat 3099983  T
Q  185 ttgttctcctttttatt 201  Q
    |||||||||||||||||    
T  3099984 ttgttctcctttttatt 3100000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 44052553 - 44052668
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt--aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaat 184  Q
    |||||||||| |||||| ||||||||||||  ||||||||||||||||  ||||||||||||       ||| |||||||||||||| |||  ||| |||    
T  44052553 aaaatataagcaaaaaaaaccaacttttatgttattattatgtttttttcaaacaaatcatc-ttttccaatgtaaaattaaatgcaaattgcattcaat 44052651  T
Q  185 ttgttctcctttttatt 201  Q
    |||||||||||||||||    
T  44052652 ttgttctcctttttatt 44052668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 35344299 - 35344414
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||| |||||||||||| |||||| ||||||||||||||||| |||||||||||        ||| |||||||||||||| |||  ||| |||     
T  35344299 aaaatataagcaaaaaagaccaatttttatgctattattatgttttttcaaacaaatcattttttttcaatgtaaaattaaatgcaaattgcattcaatg 35344398  T
Q  186 tgttctcctttttatt 201  Q
    | ||||||||||||||    
T  35344399 tattctcctttttatt 35344414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 37598003 - 37598117
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||| |||||||||||||||||||  | |||||||||||||| |||||||||||        ||| |||||||||||||| |||  ||| ||||    
T  37598003 aaaatataagcaaaaaagaccaacttttatgttgttattatgttttttcaaacaaatcat-tttttccaatgtaaaattaaatgcaaattgcattcaatt 37598101  T
Q  186 tgttctcctttttatt 201  Q
    ||||||||||||||||    
T  37598102 tgttctcctttttatt 37598117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 33851251 - 33851137
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||| |||||||| |||||||||| ||||| ||||||||||| ||||||||||||       ||| ||||||||||||||  ||  ||||||||    
T  33851251 aaaatataagcaaaaaagatcaacttttatgctatttttatgttttttcaaacaaatcatc-ttttccaatgtaaaattaaatgcaagttgcatttaatt 33851153  T
Q  186 tgttctcctttttatt 201  Q
    |||| |||||||||||    
T  33851152 tgttttcctttttatt 33851137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 36537991 - 36538105
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||| ||||||||| ||||||||| ||||| ||||||||||| ||||||||||||       ||| ||||||||||||||  ||  ||||||||    
T  36537991 aaaatataagcaaaaaagacaaacttttatgctatttttatgttttttcaaacaaatcatc-ttttccaatgtaaaattaaatgcaatttgcatttaatt 36538089  T
Q  186 tgttctcctttttatt 201  Q
    | ||||||||||||||    
T  36538090 tattctcctttttatt 36538105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 146
Target Start/End: Complemental strand, 35346532 - 35346472
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatc 146  Q
    ||||||||| ||||||||| |||||||||| ||||||||||||||||| ||||||||||||    
T  35346532 aaaatataaataaaaaagatcaacttttatgctattattatgttttttcaaacaaatcatc 35346472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 87 - 134
Target Start/End: Original strand, 11043990 - 11044037
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt 134  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||    
T  11043990 aaaatataagcaaaaaagaccaacttttatgctattattatgtttttt 11044037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 85 - 135
Target Start/End: Original strand, 16635638 - 16635688
Alignment:
Q  85 ctaaaatataagtaaaaaagaccaacttttatactattattatgtttttta 135  Q
    ||||||||||||||| |||||||||||||||| |||||| |||||||||||    
T  16635638 ctaaaatataagtaagaaagaccaacttttatgctattactatgtttttta 16635688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 86 - 201
Target Start/End: Complemental strand, 32678738 - 32678623
Alignment:
Q  86 taaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaat 184  Q
    ||||||||||| ||||||||  |||||||||  |||||||||||||||| ||||||||||||       ||| ||||||||||||||  ||  |||||||    
T  32678738 taaaatataagcaaaaaagataaacttttatgttattattatgttttttcaaacaaatcatc-ttttccaatgtaaaattaaatgcaagttgcatttaat 32678640  T
Q  185 ttgttctcctttttatt 201  Q
    ||||||| |||||||||    
T  32678639 ttgttcttctttttatt 32678623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 201
Target Start/End: Original strand, 39187177 - 39187280
Alignment:
Q  98 aaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatttgttctccttt 196  Q
    |||||| || ||||||||| ||||||||||||||||| ||||||||||||       ||| |||||||||||||| |||  ||| |||||||||||||||    
T  39187177 aaaaaaaacaaacttttatgctattattatgttttttcaaacaaatcatc-atttccaatgtaaaattaaatgcaaattgcattcaatttgttctccttt 39187275  T
Q  197 ttatt 201  Q
    |||||    
T  39187276 ttatt 39187280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 201
Target Start/End: Complemental strand, 44411426 - 44411323
Alignment:
Q  98 aaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatttgttctccttt 196  Q
    ||||||||||||||||||| |||||||||| |||||| ||||||||||||       ||| |||||||||||||| |||  ||| ||| |||||||||||    
T  44411426 aaaaaagaccaacttttatgctattattatattttttcaaacaaatcatc-tttttcaatgtaaaattaaatgcaaattgcattcaatgtgttctccttt 44411328  T
Q  197 ttatt 201  Q
    |||||    
T  44411327 ttatt 44411323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 86 - 198
Target Start/End: Original strand, 11992659 - 11992772
Alignment:
Q  86 taaaatataagtaaaaaagaccaacttttatactattattatgtttttt--aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaa 183  Q
    ||||||||||| |||||| ||| |||||||| |||||||||||||||||  ||||||||||||       ||| |||||||||||||| |||  ||| ||    
T  11992659 taaaatataagcaaaaaaaacctacttttatgctattattatgtttttttcaaacaaatcatc-ttttccaatgtaaaattaaatgcaaattgcattcaa 11992757  T
Q  184 tttgttctccttttt 198  Q
    ||||||| |||||||    
T  11992758 tttgttcaccttttt 11992772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 134
Target Start/End: Original strand, 16635370 - 16635419
Alignment:
Q  85 ctaaaatataagtaaaaaagaccaacttttatactattattatgtttttt 134  Q
    ||||||||||||||| |||||||||||||||| |||||| ||||||||||    
T  16635370 ctaaaatataagtaagaaagaccaacttttatgctattactatgtttttt 16635419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 132
Target Start/End: Original strand, 16635506 - 16635553
Alignment:
Q  85 ctaaaatataagtaaaaaagaccaacttttatactattattatgtttt 132  Q
    ||||||||||||||| |||||||||||||||| |||||| ||||||||    
T  16635506 ctaaaatataagtaagaaagaccaacttttatgctattactatgtttt 16635553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 134
Target Start/End: Complemental strand, 31133812 - 31133765
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt 134  Q
    |||||||||| ||||||||||||||||||| ||||| |||||||||||    
T  31133812 aaaatataagaaaaaaagaccaacttttatgctattgttatgtttttt 31133765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 98 - 201
Target Start/End: Complemental strand, 37567648 - 37567545
Alignment:
Q  98 aaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatttgttctccttt 196  Q
    |||||| |||||||||||| ||||||||||||||||| | ||||||||||       ||| |||||||||||||| |||  ||| |||||||| ||||||    
T  37567648 aaaaaataccaacttttatgctattattatgttttttcagacaaatcatc-ttttccaatgtaaaattaaatgcaaattgcattcaatttgttttccttt 37567550  T
Q  197 ttatt 201  Q
    |||||    
T  37567549 ttatt 37567545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 3e-22; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 28424204 - 28424318
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    ||||| |||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||       ||| |||||||||||||| ||| |||| ||||    
T  28424204 aaaatttaagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatc-ttttccaatgtaaaattaaatgcaaattgtattcaatt 28424302  T
Q  186 tgttctcctttttatt 201  Q
    ||||||||||||||||    
T  28424303 tgttctcctttttatt 28424318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 5091768 - 5091652
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt---aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaa 183  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||   ||||||||||||       ||| |||||||||||||| |||  ||| ||    
T  5091768 aaaatataagtaaaaaagaccaacttttatgccattattatgttttttttcaaacaaatcatc-tttttcaatgtaaaattaaatgcaaattgcattcaa 5091670  T
Q  184 tttgttctcctttttatt 201  Q
    ||||||||||||||||||    
T  5091669 tttgttctcctttttatt 5091652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 8784325 - 8784439
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtt-ttttaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||       ||| |||||||||||||| |||  ||| |||     
T  8784325 aaaatataagtaaaaaagaccaacttttatgctattattatgttatttcaaacaaatcatc-tttttcaatgtaaaattaaatgcaaattgcattcaatg 8784423  T
Q  186 tgttctcctttttatt 201  Q
    ||||||||||||||||    
T  8784424 tgttctcctttttatt 8784439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 29514245 - 29514131
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||       ||| |||||||||||||| |||  ||| ||||    
T  29514245 aaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatc-ttttttaatgtaaaattaaatgcaaattgcattcaatt 29514147  T
Q  186 tgttctcctttttatt 201  Q
    ||||||| ||||||||    
T  29514146 tgttctcatttttatt 29514131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 33635266 - 33635380
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||| ||||||||||||||||||| ||||| ||||||||||| ||||||||||||       ||| ||||||||||||||  ||  ||||||||    
T  33635266 aaaatataagcaaaaaagaccaacttttatgctatttttatgttttttcaaacaaatcatc-ttttctaatgtaaaattaaatgcaagttgcatttaatt 33635364  T
Q  186 tgttctcctttttatt 201  Q
    ||||||||||||||||    
T  33635365 tgttctcctttttatt 33635380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 14565600 - 14565485
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt--aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaat 184  Q
    |||||||||| ||||||||| ||||||||| |||||||||||||||||  ||| ||||||||       ||| |||||||||||||| |||  |||||||    
T  14565600 aaaatataagcaaaaaagactaacttttatgctattattatgtttttttcaaagaaatcatc-ttttccaatgtaaaattaaatgcaaattgcatttaat 14565502  T
Q  185 ttgttctcctttttatt 201  Q
    |||||||||||||||||    
T  14565501 ttgttctcctttttatt 14565485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 792582 - 792468
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||| |||||||||||||||||||  |||||||||||||||| ||| ||||||||       ||| |||||||||||||| |||  ||| ||||    
T  792582 aaaatataagcaaaaaagaccaacttttatgttattattatgttttttcaaagaaatcatc-ttttccaatgtaaaattaaatgcaaattgcattcaatt 792484  T
Q  186 tgttctcctttttatt 201  Q
    ||||||||||||||||    
T  792483 tgttctcctttttatt 792468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 21539687 - 21539801
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||| |||||||||||||||||||  |||||||||||||||| ||||||||||||       ||| ||||||||||||||  ||  ||| ||||    
T  21539687 aaaatataagcaaaaaagaccaacttttatgttattattatgttttttcaaacaaatcatc-ttttccaatgtaaaattaaatgcaagttgcattcaatt 21539785  T
Q  186 tgttctcctttttatt 201  Q
    ||||||||||||||||    
T  21539786 tgttctcctttttatt 21539801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 43075680 - 43075794
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||| |||||| |||||||||||| ||||||||||||||||| ||||||||||||       ||| |||||||||||||| |||  ||| ||||    
T  43075680 aaaatataagcaaaaaataccaacttttatgctattattatgttttttcaaacaaatcatc-tattccaatgtaaaattaaatgcaaattgcattcaatt 43075778  T
Q  186 tgttctcctttttatt 201  Q
    |||| |||||||||||    
T  43075779 tgttttcctttttatt 43075794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 29514700 - 29514587
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||       ||| |||||||||||| | |||  ||| ||||    
T  29514700 aaaatataag-aaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatc-tttcccaatgtaaaattaaatgtaaattgcattcaatt 29514603  T
Q  186 tgttctcctttttatt 201  Q
    |||| |||||||||||    
T  29514602 tgttgtcctttttatt 29514587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 146
Target Start/End: Complemental strand, 15858836 - 15858776
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatc 146  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||||| ||| ||||||||    
T  15858836 aaaatataagtaaaaaagaccaaattttatgctattattatgttttttcaaataaatcatc 15858776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 86 - 145
Target Start/End: Original strand, 28492449 - 28492509
Alignment:
Q  86 taaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcat 145  Q
    ||||||||||| ||||||||||||||||||| |||||||||| |||||| |||||||||||    
T  28492449 taaaatataagcaaaaaagaccaacttttatgctattattatattttttcaaacaaatcat 28492509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 4033901 - 4033787
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||| |||||||| ||| |||||| ||||||||||||||||| ||||||| ||||       ||| |||||||||||||| |||  ||| ||||    
T  4033901 aaaatataagcaaaaaagatcaatttttatgctattattatgttttttcaaacaaaacatc-tttttcaatgtaaaattaaatgcaaattgcattcaatt 4033803  T
Q  186 tgttctcctttttatt 201  Q
    | ||||||||||||||    
T  4033802 tattctcctttttatt 4033787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 35832342 - 35832456
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||| |||||||||  | |||||| ||||||||||||||||| ||||||||||||       |||||||||||||||||| |||  ||| |||     
T  35832342 aaaatataagcaaaaaagacatatttttatgctattattatgttttttcaaacaaatcatc-ttttccaatataaaattaaatgcaaattgcattcaatc 35832440  T
Q  186 tgttctcctttttatt 201  Q
    ||||| ||||||||||    
T  35832441 tgttcacctttttatt 35832456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 22162247 - 22162364
Alignment:
Q  85 ctaaaatataagtaaaaaagacc-aacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatattta 182  Q
    |||||||||||| |||||||||  ||||||||| ||||||||||||||||| |||||||| |||       ||| |||||||||||||| |||  ||| |    
T  22162247 ctaaaatataagcaaaaaagacttaacttttatgctattattatgttttttcaaacaaataatc-ttttccaatgtaaaattaaatgcaaattgcattca 22162345  T
Q  183 atttgttctcctttttatt 201  Q
    || ||||||||||||||||    
T  22162346 atgtgttctcctttttatt 22162364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 87 - 146
Target Start/End: Complemental strand, 38549869 - 38549809
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatc 146  Q
    |||||||||| |||||||| |||||||||| ||||||||||||||||| ||| ||||||||    
T  38549869 aaaatataagcaaaaaagatcaacttttatgctattattatgttttttcaaataaatcatc 38549809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 44803829 - 44803942
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgttttttaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaattt 186  Q
    |||||||||||||||||||  |||||||||  ||||||||| ||||||||| ||||||||       ||| ||||||||||| || |||  ||| |||||    
T  44803829 aaaatataagtaaaaaagataaacttttatgttattattatattttttaaataaatcatc-ttttccaatgtaaaattaaatacaaattgcattcaattt 44803927  T
Q  187 gttctcctttttatt 201  Q
    |||||||| ||||||    
T  44803928 gttctcctatttatt 44803942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 134
Target Start/End: Complemental strand, 18834138 - 18834091
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt 134  Q
    |||||||||| |||||||| |||||||||| |||||||||||||||||    
T  18834138 aaaatataagcaaaaaagatcaacttttattctattattatgtttttt 18834091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 146
Target Start/End: Original strand, 10979132 - 10979181
Alignment:
Q  98 aaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatc 146  Q
    ||||||||||||||||||| ||||| ||||||||||| ||||||||||||    
T  10979132 aaaaaagaccaacttttatgctatttttatgttttttcaaacaaatcatc 10979181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 3e-22; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 28916745 - 28916631
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||       |||||||||||||||||| |||  ||| ||||    
T  28916745 aaaatataagtaaaaaagacaaacttttatgctattattatgttttttcaaacaaatcatc-ttttccaatataaaattaaatgcaaattgcattcaatt 28916647  T
Q  186 tgttctcctttttatt 201  Q
    |||||| |||||||||    
T  28916646 tgttcttctttttatt 28916631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 44875109 - 44875223
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||       ||| |||||||||||||| |||  ||| ||||    
T  44875109 aaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatc-ttttccaatgtaaaattaaatgcaaattgcattcaatt 44875207  T
Q  186 tgttctcctttttatt 201  Q
    ||||||||||||||||    
T  44875208 tgttctcctttttatt 44875223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 46949251 - 46949365
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||| |||||||||||||||||||  |||||||||||||||| ||||||||||||       ||| |||||||||||||| ||| |||| ||||    
T  46949251 aaaatataagcaaaaaagaccaacttttatgttattattatgttttttcaaacaaatcatc-tttttcaatgtaaaattaaatgcaaattgtattcaatt 46949349  T
Q  186 tgttctcctttttatt 201  Q
    ||||||||||||||||    
T  46949350 tgttctcctttttatt 46949365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 23874057 - 23873943
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||| | ||||||||||||||||||| ||||||||||||||||| ||||||||||||       ||| |||||||||||||| |||  ||||||||    
T  23874057 aaaatatacgcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatc-ttttccaatgtaaaattaaatgcaaattgcatttaatt 23873959  T
Q  186 tgttctcctttttatt 201  Q
    ||||||| ||||||||    
T  23873958 tgttctcttttttatt 23873943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 25990678 - 25990792
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||| |||||||||||| |||||| ||||||||||||||||| ||||||||||||       ||| |||||||||||||| |||  ||| ||||    
T  25990678 aaaatataagcaaaaaagaccaatttttatgctattattatgttttttcaaacaaatcatc-ttttccaatgtaaaattaaatgcaaattgcattcaatt 25990776  T
Q  186 tgttctcctttttatt 201  Q
    ||||||||||||||||    
T  25990777 tgttctcctttttatt 25990792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 26907319 - 26907205
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||       ||| |||||||||||||| |||  ||| ||||    
T  26907319 aaaatataagtaaaaaagaccaacttttatgctattattatgttttttcaaacaaattatc-tttttcaatgtaaaattaaatgcaaattgcattcaatt 26907221  T
Q  186 tgttctcctttttatt 201  Q
    | ||||||||||||||    
T  26907220 tattctcctttttatt 26907205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 49924349 - 49924463
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||| |||||||| |||||||||| ||||| ||||||||||| ||||||||||||       ||| ||||||||||||||  ||| ||||||||    
T  49924349 aaaatataagcaaaaaagatcaacttttatgctatttttatgttttttcaaacaaatcatc-ttttccaatgtaaaattaaatgcaagttacatttaatt 49924447  T
Q  186 tgttctcctttttatt 201  Q
    ||||||||||||||||    
T  49924448 tgttctcctttttatt 49924463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 86 - 201
Target Start/End: Original strand, 47996883 - 47996998
Alignment:
Q  86 taaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaat 184  Q
    ||||||||||| |||||||| ||| |||||| ||||||||||||||||| ||||||||||||       ||| ||||||||||| || ||| |||| |||    
T  47996883 taaaatataagcaaaaaagatcaatttttatgctattattatgttttttcaaacaaatcatc-ttttccaatgtaaaattaaatacaaattgtattcaat 47996981  T
Q  185 ttgttctcctttttatt 201  Q
    |||||||||||||||||    
T  47996982 ttgttctcctttttatt 47996998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 28017588 - 28017702
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||| |||||||| |||||||||| ||||||||||||||||| ||||||||||||       ||| |||||||||||||| |||  ||| |||     
T  28017588 aaaatataagcaaaaaagatcaacttttatgctattattatgttttttcaaacaaatcatc-ttttccaatgtaaaattaaatgcaaattgcattcaatg 28017686  T
Q  186 tgttctcctttttatt 201  Q
    ||||||||||||||||    
T  28017687 tgttctcctttttatt 28017702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 40960704 - 40960590
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||| |||||||| |||||||||| ||||| ||||||||||| ||||||||||||       ||| ||||||||||||||  ||  ||||||||    
T  40960704 aaaatataagcaaaaaagatcaacttttatgctatttttatgttttttcaaacaaatcatc-tttttcaatgtaaaattaaatgcaagttgcatttaatt 40960606  T
Q  186 tgttctcctttttatt 201  Q
    ||||||||||||||||    
T  40960605 tgttctcctttttatt 40960590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 18036475 - 18036588
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||       ||  |||||||||||||| |||  ||| ||||    
T  18036475 aaaatataag-aaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttccaaa-gtaaaattaaatgcaaattgcattcaatt 18036572  T
Q  186 tgttctcctttttatt 201  Q
    | ||||||||||||||    
T  18036573 tattctcctttttatt 18036588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 29488678 - 29488792
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||| ||        ||| ||||||||||||||  ||  ||| ||||    
T  29488678 aaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaataat-attttccaatgtaaaattaaatgcaagttgcattcaatt 29488776  T
Q  186 tgttctcctttttatt 201  Q
    ||||||||||||||||    
T  29488777 tgttctcctttttatt 29488792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 38942671 - 38942557
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||| |||||||| |||||||||| ||||||||||||||||| |||||||||||        ||| ||||||||||||||  ||  ||| ||||    
T  38942671 aaaatataagcaaaaaagatcaacttttatgctattattatgttttttcaaacaaatcat-tttttccaatgtaaaattaaatgcaagttgcattcaatt 38942573  T
Q  186 tgttctcctttttatt 201  Q
    ||||||||||||||||    
T  38942572 tgttctcctttttatt 38942557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 146
Target Start/End: Original strand, 9127973 - 9128033
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatc 146  Q
    |||||||||| ||||||||||||||||||| |||||||||| |||||| ||||||||||||    
T  9127973 aaaatataagcaaaaaagaccaacttttatgctattattatattttttcaaacaaatcatc 9128033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 86 - 145
Target Start/End: Original strand, 35884151 - 35884211
Alignment:
Q  86 taaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcat 145  Q
    ||||||||||| ||||||||||||||||||| |||||||||| |||||| |||||||||||    
T  35884151 taaaatataagcaaaaaagaccaacttttatgctattattatattttttcaaacaaatcat 35884211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 198
Target Start/End: Original strand, 15285734 - 15285845
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||| |||||||||||| |||||| | ||||||||||||||| ||||||||||||       ||| |||||||||||||| |||  ||| ||||    
T  15285734 aaaatataagcaaaaaagaccaatttttatgccattattatgttttttcaaacaaatcatc-tttttcaatgtaaaattaaatgcaaattgcattcaatt 15285832  T
Q  186 tgttctccttttt 198  Q
    ||||||| |||||    
T  15285833 tgttctctttttt 15285845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 39026476 - 39026362
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||| ||||||||||||||||||| ||||| ||||||||||| ||| |||||||        ||| ||||||||||||||  ||  ||||||||    
T  39026476 aaaatataagcaaaaaagaccaacttttatgctatttttatgttttttcaaataaatcat-attttccaatgtaaaattaaatgcaagttgcatttaatt 39026378  T
Q  186 tgttctcctttttatt 201  Q
    | ||||||||||||||    
T  39026377 tattctcctttttatt 39026362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 35941771 - 35941885
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||| |||||| | |||||||||| ||||||||||||||||| ||||||||||||       ||| ||||||||||| || |||  ||| ||||    
T  35941771 aaaatataagcaaaaaaaatcaacttttatgctattattatgttttttcaaacaaatcatc-tttttcaatgtaaaattaaatacaaattgcattcaatt 35941869  T
Q  186 tgttctcctttttatt 201  Q
    ||||||| ||||||||    
T  35941870 tgttctcttttttatt 35941885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 40219987 - 40220100
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||| ||||||||| || |||||| ||||||||||||||||| |||||||| |||       ||| |||||||||||||| |||  ||| ||||    
T  40219987 aaaatataagcaaaaaagactaatttttatgctattattatgttttttcaaacaaat-atc-ttttccaatgtaaaattaaatgcaaattgcattcaatt 40220084  T
Q  186 tgttctcctttttatt 201  Q
    ||||||||||||||||    
T  40220085 tgttctcctttttatt 40220100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 134
Target Start/End: Original strand, 4529117 - 4529164
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt 134  Q
    |||||||||| |||||||| |||||||||| |||||||||||||||||    
T  4529117 aaaatataagcaaaaaagatcaacttttatgctattattatgtttttt 4529164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 134
Target Start/End: Original strand, 35189130 - 35189177
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt 134  Q
    |||||||||| |||||||||||||||||||  ||||||||||||||||    
T  35189130 aaaatataagcaaaaaagaccaacttttatggtattattatgtttttt 35189177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 45358106 - 45357992
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtt-ttttaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||| |||||| |||||||||||| ||||| ||||||| ||| ||||||||||||       ||| ||||||||||| ||  ||  ||||||||    
T  45358106 aaaatataagcaaaaaaaaccaacttttatgctatttttatgttatttcaaacaaatcatc-ttttccaatgtaaaattaaatacatgttgcatttaatt 45358008  T
Q  186 tgttctcctttttatt 201  Q
    ||||| ||||||||||    
T  45358007 tgttcacctttttatt 45357992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 87 - 134
Target Start/End: Original strand, 36383858 - 36383905
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt 134  Q
    |||||||||| |||||||| ||||||||||  ||||||||||||||||    
T  36383858 aaaatataagcaaaaaagatcaacttttatgttattattatgtttttt 36383905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 1820327 - 1820364
Alignment:
Q  85 ctaaaatataagtaaaaaagaccaacttttatactatt 122  Q
    |||||||||||||||||||||| ||||||||| |||||    
T  1820327 ctaaaatataagtaaaaaagacaaacttttatcctatt 1820364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 47026406 - 47026443
Alignment:
Q  85 ctaaaatataagtaaaaaagaccaacttttatactatt 122  Q
    |||||||||||||||||||||| ||||||||| |||||    
T  47026406 ctaaaatataagtaaaaaagacaaacttttatcctatt 47026443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 196
Target Start/End: Complemental strand, 3861851 - 3861812
Alignment:
Q  156 tataaaattaaatgcagattatatttaatttgttctccttt 196  Q
    |||||||||||||||| |||||||||||||| |||||||||    
T  3861851 tataaaattaaatgcaaattatatttaattt-ttctccttt 3861812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 146
Target Start/End: Original strand, 26479669 - 26479729
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatc 146  Q
    |||||||||  |||||| |||||||||||| | |||||||| |||||| ||||||||||||    
T  26479669 aaaatataaacaaaaaaaaccaacttttatgccattattatattttttcaaacaaatcatc 26479729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 5e-21; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 89 - 201
Target Start/End: Original strand, 35181123 - 35181235
Alignment:
Q  89 aatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatttg 187  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||       ||| |||||||||||||| |||  ||| ||||||    
T  35181123 aatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatc-tttttcaatgtaaaattaaatgcaaattgcattcaatttg 35181221  T
Q  188 ttctcctttttatt 201  Q
    ||||||||||||||    
T  35181222 ttctcctttttatt 35181235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 86 - 201
Target Start/End: Original strand, 48879316 - 48879431
Alignment:
Q  86 taaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaat 184  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||| ||| ||||||||       ||| |||||||||||||| |||  ||| |||    
T  48879316 taaaatataagtaaaaaagaccaacttttatgttattattatgttttttcaaaaaaatcatc-tttttcaatgtaaaattaaatgcaaattgcattcaat 48879414  T
Q  185 ttgttctcctttttatt 201  Q
    |||||||||||||||||    
T  48879415 ttgttctcctttttatt 48879431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 43108091 - 43107976
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt--aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaat 184  Q
    |||||||||| |||||||||||||||||||  ||||||||||||||||  ||||||||||||       ||| |||||||||||||| |||  ||| |||    
T  43108091 aaaatataagcaaaaaagaccaacttttatgttattattatgtttttttcaaacaaatcatc-ttttccaatgtaaaattaaatgcaaattgcattcaat 43107993  T
Q  185 ttgttctcctttttatt 201  Q
    |||||||||||||||||    
T  43107992 ttgttctcctttttatt 43107976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 23731489 - 23731603
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||| |||||||| |||||||||| ||||| ||||||||||| ||||||||||||       ||| ||||||||||||||  ||  ||||||||    
T  23731489 aaaatataagcaaaaaagatcaacttttatgctatttttatgttttttcaaacaaatcatc-ttttccaatgtaaaattaaatgcaagttgcatttaatt 23731587  T
Q  186 tgttctcctttttatt 201  Q
    ||||||||||||||||    
T  23731588 tgttctcctttttatt 23731603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 45598833 - 45598947
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||| ||||||||| || |||||| ||||||||||||||||| ||||||||||||       ||| |||||||||||||| |||  ||| ||||    
T  45598833 aaaatataagcaaaaaagactaatttttatgctattattatgttttttcaaacaaatcatc-ttttccaatgtaaaattaaatgcaaattgcattcaatt 45598931  T
Q  186 tgttctcctttttatt 201  Q
    ||||||||||||||||    
T  45598932 tgttctcctttttatt 45598947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 197
Target Start/End: Complemental strand, 21654306 - 21654196
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||  ||||| ||||||||||||| ||||||||||||||||| |||||||||| |       ||| |||||||||||||| |||| ||| ||||    
T  21654306 aaaatataaacaaaaaggaccaacttttatgctattattatgttttttcaaacaaatca-ccttttccaatgtaaaattaaatgcaaattacattcaatt 21654208  T
Q  186 tgttctcctttt 197  Q
    ||||||||||||    
T  21654207 tgttctcctttt 21654196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 201
Target Start/End: Original strand, 23106393 - 23106496
Alignment:
Q  98 aaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatttgttctccttt 196  Q
    ||||||||| ||||||||| ||||||||||||||||| ||||||||||||       ||| |||||||||||||| |||  ||| |||||||||||||||    
T  23106393 aaaaaagactaacttttatgctattattatgttttttcaaacaaatcatc-ttttccaatgtaaaattaaatgcaaattgcattcaatttgttctccttt 23106491  T
Q  197 ttatt 201  Q
    |||||    
T  23106492 ttatt 23106496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 86 - 201
Target Start/End: Original strand, 34808147 - 34808262
Alignment:
Q  86 taaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaat 184  Q
    ||||||||||| |||||||||||||||||||  |||||||||||||||| ||||||||||||       ||  |||||||||||||| |||  ||| |||    
T  34808147 taaaatataagcaaaaaagaccaacttttatgttattattatgttttttcaaacaaatcatc-tttttcaacgtaaaattaaatgcaaattgcattcaat 34808245  T
Q  185 ttgttctcctttttatt 201  Q
    |||||| ||||||||||    
T  34808246 ttgttcacctttttatt 34808262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 198
Target Start/End: Original strand, 36576347 - 36576458
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||| ||| ||||||||       ||| ||||||||||||||  ||  ||| ||||    
T  36576347 aaaatataagtaaaaaagacaaacttttatgctattattatgttttttcaaataaatcatc-ttttccaatgtaaaattaaatgcaagttgcattcaatt 36576445  T
Q  186 tgttctccttttt 198  Q
    |||||||||||||    
T  36576446 tgttctccttttt 36576458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 19933240 - 19933126
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||| ||||||||  ||||||||| ||||| ||||||||||| ||||||||||||       ||| ||||||||||||||  ||  ||||||||    
T  19933240 aaaatataagcaaaaaagataaacttttatgctatttttatgttttttcaaacaaatcatc-ttttccaatgtaaaattaaatgcaagttgcatttaatt 19933142  T
Q  186 tgttctcctttttatt 201  Q
    ||||||||||||||||    
T  19933141 tgttctcctttttatt 19933126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 19964379 - 19964265
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||| ||||||||  ||||||||| ||||| ||||||||||| ||||||||||||       ||| ||||||||||||||  ||  ||||||||    
T  19964379 aaaatataagcaaaaaagataaacttttatgctatttttatgttttttcaaacaaatcatc-ttttccaatgtaaaattaaatgcaagttgcatttaatt 19964281  T
Q  186 tgttctcctttttatt 201  Q
    ||||||||||||||||    
T  19964280 tgttctcctttttatt 19964265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 87 - 134
Target Start/End: Complemental strand, 7989475 - 7989428
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt 134  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||    
T  7989475 aaaatataagtaaaaaagaccaacttttatgttattattatgtttttt 7989428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 198
Target Start/End: Complemental strand, 32491291 - 32491181
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||| |||||| |||||||||||| ||||| ||||||||||| ||||||||||||       ||| ||||||||||||||  ||  ||||||||    
T  32491291 aaaatataagcaaaaaaaaccaacttttatgctatt-ttatgttttttcaaacaaatcatc-ttttcgaatgtaaaattaaatgcaagttgcatttaatt 32491194  T
Q  186 tgttctccttttt 198  Q
    |||||||||||||    
T  32491193 tgttctccttttt 32491181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 40583074 - 40583188
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||| |||||| ||||||||||||  |||||||||||||||| |||||||||||        ||| |||||||||||||| |||  ||| ||||    
T  40583074 aaaatataagcaaaaaataccaacttttatgttattattatgttttttcaaacaaatcat-atttttcaatgtaaaattaaatgcaaattgcattcaatt 40583172  T
Q  186 tgttctcctttttatt 201  Q
    | ||||||||||||||    
T  40583173 tattctcctttttatt 40583188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 3157365 - 3157479
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgt-tttttaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||| ||||||||| ||||||||| |||||||||||| |||| ||||||||||||       ||| ||||||||||||||  ||  ||| ||||    
T  3157365 aaaatataagcaaaaaagactaacttttatgctattattatgtattttcaaacaaatcatc-ttttccaatgtaaaattaaatgcaagttgcattcaatt 3157463  T
Q  186 tgttctcctttttatt 201  Q
    |||| |||||||||||    
T  3157464 tgttttcctttttatt 3157479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 88 - 201
Target Start/End: Complemental strand, 22111514 - 22111401
Alignment:
Q  88 aaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaattt 186  Q
    ||||||||| |||||| ||||||||||||  |||||||||||||||| |||||||||||        ||| |||||||||||||| |||  ||| |||||    
T  22111514 aaatataagcaaaaaataccaacttttatgttattattatgttttttcaaacaaatcat-atttttcaatgtaaaattaaatgcaaattgcattcaattt 22111416  T
Q  187 gttctcctttttatt 201  Q
     ||||||||||||||    
T  22111415 attctcctttttatt 22111401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 47383335 - 47383449
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||| |||||| ||||||||||||  |||||||||||||||| ||||||||||||       ||| |||||||||||| | |||  ||| ||||    
T  47383335 aaaatataagcaaaaaataccaacttttatgatattattatgttttttcaaacaaatcatc-ttttccaatgtaaaattaaatgtaaattgcattcaatt 47383433  T
Q  186 tgttctcctttttatt 201  Q
    | ||||||||||||||    
T  47383434 tattctcctttttatt 47383449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 87 - 146
Target Start/End: Original strand, 44600375 - 44600435
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatc 146  Q
    |||||||||| |||||||||||||||||||  |||||||||||||||| ||| ||||||||    
T  44600375 aaaatataagcaaaaaagaccaacttttatgttattattatgttttttcaaataaatcatc 44600435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 134
Target Start/End: Complemental strand, 41815878 - 41815831
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt 134  Q
    |||||||||| |||||||| |||||||||| |||||||||||||||||    
T  41815878 aaaatataagcaaaaaagatcaacttttatgctattattatgtttttt 41815831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 39348718 - 39348832
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgttttttaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaattt 186  Q
    |||||||||| ||||||||||||||||||| |||||||| |||| ||| || |||| |         ||  |||||||||||||| ||| |||| |||||    
T  39348718 aaaatataagcaaaaaagaccaacttttatgctattattgtgttgtttcaaaaaattaatcttttccaaagtaaaattaaatgcaaattgtattcaattt 39348817  T
Q  187 gttctcctttttatt 201  Q
    |||||||||| ||||    
T  39348818 gttctcctttctatt 39348832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 40560311 - 40560425
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||  |||||||||| | |||||| ||||| ||||||||||| ||||||||||||       ||| ||||||||||||||  ||  ||||||||    
T  40560311 aaaatataatcaaaaaagacccatttttatgctatttttatgttttttcaaacaaatcatc-ttttccaatgtaaaattaaatgcaagttgcatttaatt 40560409  T
Q  186 tgttctcctttttatt 201  Q
    | ||||||||||||||    
T  40560410 tattctcctttttatt 40560425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 41889100 - 41889214
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||| |||||| | |||||||||| | ||||||||||||||| ||||||||||||       ||| ||||||| || ||| |||  ||| ||||    
T  41889100 aaaatataagcaaaaaaaatcaacttttatgccattattatgttttttcaaacaaatcatc-ttttccaatgtaaaattcaaagcaaattgcattcaatt 41889198  T
Q  186 tgttctcctttttatt 201  Q
    ||||||||||||||||    
T  41889199 tgttctcctttttatt 41889214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 87 - 146
Target Start/End: Original strand, 9818410 - 9818468
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgttttttaaacaaatcatc 146  Q
    |||||||||| |||||||||||||||||||  ||||||| | ||||| ||||||||||||    
T  9818410 aaaatataagcaaaaaagaccaacttttatgttattatt-tttttttcaaacaaatcatc 9818468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 87 - 146
Target Start/End: Original strand, 10720335 - 10720393
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgttttttaaacaaatcatc 146  Q
    |||||||||| |||||||||||||||||||  ||||||| | ||||| ||||||||||||    
T  10720335 aaaatataagcaaaaaagaccaacttttatgttattatt-tttttttcaaacaaatcatc 10720393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 158 - 201
Target Start/End: Complemental strand, 18206433 - 18206390
Alignment:
Q  158 taaaattaaatgcagattatatttaatttgttctcctttttatt 201  Q
    ||||||||||||||  || |||||||||||||||||||||||||    
T  18206433 taaaattaaatgcaagttgtatttaatttgttctcctttttatt 18206390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 42617600 - 42617714
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||| ||||||||| |||| ||||  |||||||||||||||| |||||||| ||        ||| |||||||||||||| |||  ||| ||||    
T  42617600 aaaatataagcaaaaaagacaaactcttatgatattattatgttttttcaaacaaattat-ttttttcaatgtaaaattaaatgcaaattgcattcaatt 42617698  T
Q  186 tgttctcctttttatt 201  Q
    ||| ||||||||||||    
T  42617699 tgtgctcctttttatt 42617714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 127
Target Start/End: Complemental strand, 48341617 - 48341575
Alignment:
Q  85 ctaaaatataagtaaaaaagaccaacttttatactattattat 127  Q
    ||||||||||||||||||| |||| ||||||| ||||||||||    
T  48341617 ctaaaatataagtaaaaaataccatcttttatgctattattat 48341575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 87 - 128
Target Start/End: Complemental strand, 41890445 - 41890404
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatg 128  Q
    |||||||||| |||||||||||| |||||| |||||||||||    
T  41890445 aaaatataagcaaaaaagaccaatttttatgctattattatg 41890404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 52; Significance: 5e-21; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 53020113 - 53020228
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt--aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaat 184  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||  ||||||||||||       ||| |||||||||||||| |||  ||| |||    
T  53020113 aaaatataagtaaaaaataccaacttttatgctattattatgtttttttcaaacaaatcatc-tttttcaatgtaaaattaaatgcaaattgcattcaat 53020211  T
Q  185 ttgttctcctttttatt 201  Q
    |||||||||||||||||    
T  53020212 ttgttctcctttttatt 53020228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 46580467 - 46580581
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||        ||| |||||||||||||| |||  ||| ||||    
T  46580467 aaaatataagtaaaaaagaccaacttttatgccattattatgttttttcaaacaaatcat-attttacaatgtaaaattaaatgcaaattgcattcaatt 46580565  T
Q  186 tgttctcctttttatt 201  Q
    ||||||||||||||||    
T  46580566 tgttctcctttttatt 46580581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 21654175 - 21654290
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt--aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaat 184  Q
    |||||||||| |||||||||||||||||||  ||||||||||||||||  ||||||||||||       ||| |||||||||||||| |||  ||| |||    
T  21654175 aaaatataagcaaaaaagaccaacttttatgttattattatgtttttttcaaacaaatcatc-ttttccaatgtaaaattaaatgcaaattgcattcaat 21654273  T
Q  185 ttgttctcctttttatt 201  Q
    |||||||||||||||||    
T  21654274 ttgttctcctttttatt 21654290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 23513498 - 23513612
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||| |||||| |||||||||||| ||||||||||||||||| ||||||| ||||       ||| |||||||||||||| |||  ||| ||||    
T  23513498 aaaatataagcaaaaaataccaacttttatgctattattatgttttttcaaacaaaacatc-tttttcaatgtaaaattaaatgcaaattgcattcaatt 23513596  T
Q  186 tgttctcctttttatt 201  Q
    ||||||||||||||||    
T  23513597 tgttctcctttttatt 23513612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 26641301 - 26641187
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||| |||||| |||||||||||| ||||||||||||||||| ||||||||||||       ||  |||||||||||||| |||  ||| ||||    
T  26641301 aaaatataagcaaaaaacaccaacttttatgctattattatgttttttcaaacaaatcatc-tttttcaaggtaaaattaaatgcaaattgcattcaatt 26641203  T
Q  186 tgttctcctttttatt 201  Q
    ||||||||||||||||    
T  26641202 tgttctcctttttatt 26641187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 46819980 - 46820094
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatg-ttttttaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    ||||||||| ||||||||| |||||||||| ||||| ||||| ||||||||||||||||||       ||| ||||||||||||||  ||  ||||||||    
T  46819980 aaaatataaataaaaaagatcaacttttatgctatttttatgtttttttaaacaaatcatc-ttttccaatgtaaaattaaatgcaagttgcatttaatt 46820078  T
Q  186 tgttctcctttttatt 201  Q
    ||||||||||||||||    
T  46820079 tgttctcctttttatt 46820094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 43575889 - 43576002
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgttttttaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaattt 186  Q
    |||||||||| |||||||| |||||||||| ||||| |||||||||| ||||||||||||       ||| ||||||||||||||  ||  |||||||||    
T  43575889 aaaatataagcaaaaaagatcaacttttatgctatttttatgtttttcaaacaaatcatc-ttttctaatgtaaaattaaatgcaagttgcatttaattt 43575987  T
Q  187 gttctcctttttatt 201  Q
     ||||||||||||||    
T  43575988 attctcctttttatt 43576002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 46296268 - 46296152
Alignment:
Q  85 ctaaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaa 183  Q
    |||||||||||| |||||||| |||||||||| ||||| ||||||||||| ||||||||||||        || ||||||||||||||  ||  ||||||    
T  46296268 ctaaaatataagcaaaaaagatcaacttttatgctatttttatgttttttcaaacaaatcatcttttccg-atgtaaaattaaatgcaagttgcatttaa 46296170  T
Q  184 tttgttctcctttttatt 201  Q
    ||||||||||||||||||    
T  46296169 tttgttctcctttttatt 46296152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 28793092 - 28793207
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||| ||||||||||||||||||| ||||| ||||||||||| ||||||||||||       |    |||||||||||||  ||  ||||||||    
T  28793092 aaaatataagcaaaaaagaccaacttttatgctatttttatgttttttcaaacaaatcatcttttctaatgtaaaaattaaatgcaagttgcatttaatt 28793191  T
Q  186 tgttctcctttttatt 201  Q
    ||||||||||||||||    
T  28793192 tgttctcctttttatt 28793207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 31126143 - 31126257
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||  ||||||||||||||||||| | ||||||||||||||| |||||||||||        ||| |||||||||||||| |||  ||| ||||    
T  31126143 aaaatataaacaaaaaagaccaacttttatgccattattatgttttttcaaacaaatcat-tttttccaatgtaaaattaaatgcaaattgcattcaatt 31126241  T
Q  186 tgttctcctttttatt 201  Q
    ||||||||||||||||    
T  31126242 tgttctcctttttatt 31126257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 86 - 201
Target Start/End: Original strand, 51426547 - 51426664
Alignment:
Q  86 taaaatataagtaaaaaagaccaacttttatactattattatgtttttt---aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatattta 182  Q
    ||||||||||| |||||||||||||||||||  |||| |||||||||||   ||||||||||||       ||| |||||||||||||| |||| ||| |    
T  51426547 taaaatataagcaaaaaagaccaacttttatgttattcttatgttttttttcaaacaaatcatc-ttttctaatgtaaaattaaatgcaaattacattca 51426645  T
Q  183 atttgttctcctttttatt 201  Q
    ||||||||| |||||||||    
T  51426646 atttgttcttctttttatt 51426664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 1335041 - 1335155
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||| |||||||||||| ||||||  |||||||||||||||| ||||||||||||       ||| |||||||||||||| |||  ||| ||||    
T  1335041 aaaatataagcaaaaaagaccaatttttatgttattattatgttttttcaaacaaatcatc-tttttcaatgtaaaattaaatgcaaattgcattcaatt 1335139  T
Q  186 tgttctcctttttatt 201  Q
    |||||| |||||||||    
T  1335140 tgttcttctttttatt 1335155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 55400669 - 55400783
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||| |||||||||  |||||||| ||||||||||||||||| ||||||||||||       ||| |||||||||||||| |||  ||| ||||    
T  55400669 aaaatataagcaaaaaagacttacttttatgctattattatgttttttcaaacaaatcatc-ttttccaatgtaaaattaaatgcaaattgcattcaatt 55400767  T
Q  186 tgttctcctttttatt 201  Q
    ||||| ||||||||||    
T  55400768 tgttcacctttttatt 55400783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 146
Target Start/End: Complemental strand, 16739344 - 16739284
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatc 146  Q
    |||||||||| ||||||||||||||||||| |||||||||| |||||| ||||||||||||    
T  16739344 aaaatataagcaaaaaagaccaacttttatgctattattatattttttcaaacaaatcatc 16739284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 51255119 - 51255231
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    ||||||||||||||||||| ||||||||||  |||  ||||||||||| ||||||||||||       ||| ||||||||||||||  ||  ||||||||    
T  51255119 aaaatataagtaaaaaagatcaacttttatgttat--ttatgttttttcaaacaaatcatc-ttttccaatctaaaattaaatgcaagttgcatttaatt 51255215  T
Q  186 tgttctcctttttatt 201  Q
    ||||||||||||||||    
T  51255216 tgttctcctttttatt 51255231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 13541208 - 13541322
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||| |||||||||||||||||||  ||||||||||||||||  |||||||||||       ||| |||||||||||||| |||  ||| |||     
T  13541208 aaaatataagaaaaaaagaccaacttttatgttattattatgttttttcgaacaaatcatc-ttttccaatgtaaaattaaatgcaaattgcattcaatg 13541306  T
Q  186 tgttctcctttttatt 201  Q
    |||| |||||||||||    
T  13541307 tgttttcctttttatt 13541322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 87 - 146
Target Start/End: Original strand, 45781328 - 45781388
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatc 146  Q
    |||||||||| |||||||| |||||||||| ||||| ||||||||||| ||||||||||||    
T  45781328 aaaatataagcaaaaaagatcaacttttatgctatttttatgttttttcaaacaaatcatc 45781388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 134
Target Start/End: Complemental strand, 37324278 - 37324230
Alignment:
Q  86 taaaatataagtaaaaaagaccaacttttatactattattatgtttttt 134  Q
    ||||||||||| |||||||||||||||||||   |||||||||||||||    
T  37324278 taaaatataagcaaaaaagaccaacttttatgtcattattatgtttttt 37324230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 87 - 134
Target Start/End: Complemental strand, 36189196 - 36189149
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt 134  Q
    |||||||||| ||||||||||| |||||||  ||||||||||||||||    
T  36189196 aaaatataagcaaaaaagaccatcttttatgttattattatgtttttt 36189149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 87 - 130
Target Start/End: Complemental strand, 45347857 - 45347814
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtt 130  Q
    |||||||||| |||||||| |||||||||||||||| |||||||    
T  45347857 aaaatataagcaaaaaagatcaacttttatactatttttatgtt 45347814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 32322428 - 32322314
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||||||||||||| |  |||||| ||||| ||||||||||| |||||||| |||       ||| ||||||||||| ||  ||  ||||||||    
T  32322428 aaaatataagtaaaaaagactagattttatgctatttttatgttttttcaaacaaattatc-tttttcaatgtaaaattaaatacaagttgcatttaatt 32322330  T
Q  186 tgttctcctttttatt 201  Q
    | ||||||||||||||    
T  32322329 tattctcctttttatt 32322314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 146
Target Start/End: Original strand, 34022552 - 34022612
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatc 146  Q
    |||||||||| |||||| ||||  |||||| ||||| ||||||||||| ||||||||||||    
T  34022552 aaaatataagcaaaaaaaaccattttttatgctatttttatgttttttcaaacaaatcatc 34022612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 198
Target Start/End: Original strand, 40936390 - 40936430
Alignment:
Q  158 taaaattaaatgcagattatatttaatttgttctccttttt 198  Q
    |||||||||||||| |||||||||| |||||||| ||||||    
T  40936390 taaaattaaatgcaaattatatttattttgttctacttttt 40936430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0495 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 4561 - 4674
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgttttt-taaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||  ||||||||||||       |||||||||||||||||| |||  ||| |||     
T  4561 aaaatataagcaaaaaagaccaacttttatgctattattatgtttttccaaacaaatcatc--tttccaatataaaattaaatgcaaattgcattcaatg 4658  T
Q  186 tgttctcctttttatt 201  Q
    ||||||||||||||||    
T  4659 tgttctcctttttatt 4674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 8e-20; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 10227842 - 10227956
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgttttt-taaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||  ||||||||||||       |||||||||||||||||| |||  ||| |||     
T  10227842 aaaatataagcaaaaaagaccaacttttatgctattattatgtttttccaaacaaatcatc-ttttccaatataaaattaaatgcaaattgcattcaatg 10227940  T
Q  186 tgttctcctttttatt 201  Q
    ||||||||||||||||    
T  10227941 tgttctcctttttatt 10227956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 374029 - 374143
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||         || |||||||||||||| |||  ||| ||||    
T  374029 aaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcat-attttccgatgtaaaattaaatgcaaattgcattcaatt 374127  T
Q  186 tgttctcctttttatt 201  Q
    ||||||||||||||||    
T  374128 tgttctcctttttatt 374143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 17722036 - 17721922
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||| ||| |||||||        ||| |||||||||||||| |||  ||| ||||    
T  17722036 aaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaagaaatcat-attttccaatgtaaaattaaatgcaaattgcattcaatt 17721938  T
Q  186 tgttctcctttttatt 201  Q
    ||||||||||||||||    
T  17721937 tgttctcctttttatt 17721922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 30949065 - 30949179
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||| ||||||||| ||||||||| ||||| ||||||||||| ||||||||||||       ||| ||||||||||||||  ||  ||||||||    
T  30949065 aaaatataagcaaaaaagactaacttttatgctatttttatgttttttcaaacaaatcatc-ttttccaatgtaaaattaaatgcaagttgcatttaatt 30949163  T
Q  186 tgttctcctttttatt 201  Q
    ||||||||||||||||    
T  30949164 tgttctcctttttatt 30949179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 12278636 - 12278750
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||| |||||||| ||||||||||  |||||||||||||||| |||||||||||        ||| |||||||||||||| |||  ||| ||||    
T  12278636 aaaatataagcaaaaaagatcaacttttatgttattattatgttttttcaaacaaatcat-tttttcaaatgtaaaattaaatgcaaattgcattcaatt 12278734  T
Q  186 tgttctcctttttatt 201  Q
    ||||||||||||||||    
T  12278735 tgttctcctttttatt 12278750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 87 - 145
Target Start/End: Original strand, 33756186 - 33756245
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcat 145  Q
    |||||||||| |||||| |||||||||||| ||||||||||||||||| |||||||||||    
T  33756186 aaaatataagaaaaaaataccaacttttatgctattattatgttttttcaaacaaatcat 33756245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 201
Target Start/End: Complemental strand, 31887345 - 31887234
Alignment:
Q  91 tataagtaaaaaagaccaacttttatactattattatgtttttt--aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatttgt 188  Q
    |||||| | ||||||||||||||||| ||||| |||||||||||  ||||||||||||       ||| ||||||||||||||  ||  |||||||||||    
T  31887345 tataagcataaaagaccaacttttatgctatttttatgtttttttcaaacaaatcatc-ttttccaatgtaaaattaaatgcaagttgcatttaatttgt 31887247  T
Q  189 tctcctttttatt 201  Q
    |||| ||||||||    
T  31887246 tctcttttttatt 31887234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 143
Target Start/End: Original strand, 17598223 - 17598280
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatc 143  Q
    |||||||||| ||||||||||||||| |||  |||||||||||||||| |||||||||    
T  17598223 aaaatataagcaaaaaagaccaacttgtatgttattattatgttttttcaaacaaatc 17598280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 8e-20; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 31690847 - 31690733
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||  ||||||||||||||||||| ||||||||||||||||| ||||||||||||       ||| |||||||||||||| |||  ||| ||||    
T  31690847 aaaatataaacaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatc-ttttccaatgtaaaattaaatgcaaattgcattcaatt 31690749  T
Q  186 tgttctcctttttatt 201  Q
    ||||||||||||||||    
T  31690748 tgttctcctttttatt 31690733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 86 - 201
Target Start/End: Complemental strand, 8146241 - 8146126
Alignment:
Q  86 taaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaat 184  Q
    ||||||||||| |||||||||||||||||||  |||||||||||||||| ||||||||||||       ||| |||||||||||||| |||  ||| |||    
T  8146241 taaaatataagcaaaaaagaccaacttttatgttattattatgttttttcaaacaaatcatc-ttttccaatgtaaaattaaatgcaaattgcattcaat 8146143  T
Q  185 ttgttctcctttttatt 201  Q
    |||||||| ||||||||    
T  8146142 ttgttctcttttttatt 8146126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 86 - 201
Target Start/End: Original strand, 20914790 - 20914905
Alignment:
Q  86 taaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaat 184  Q
    ||||||||||| |||||| |||||||||||| ||||| ||||||||||| ||||||||||||       ||| ||||||||||||||  ||  |||||||    
T  20914790 taaaatataagcaaaaaataccaacttttatgctatttttatgttttttcaaacaaatcatc-ttttccaatgtaaaattaaatgcaagttgcatttaat 20914888  T
Q  185 ttgttctcctttttatt 201  Q
    |||||||||||||||||    
T  20914889 ttgttctcctttttatt 20914905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 86 - 201
Target Start/End: Complemental strand, 8541792 - 8541677
Alignment:
Q  86 taaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaat 184  Q
    ||||||||||  |||||||||||||||||||  |||||||||||||||| ||||||||||||       ||| |||||||||||||| |||  ||| |||    
T  8541792 taaaatataacaaaaaaagaccaacttttatgttattattatgttttttcaaacaaatcatc-ttttccaatgtaaaattaaatgcaaattgcattaaat 8541694  T
Q  185 ttgttctcctttttatt 201  Q
    ||||||||| |||||||    
T  8541693 ttgttctccattttatt 8541677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 30086775 - 30086661
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    ||||||||||||||||||||||||||||||   ||||||||||||||| ||||||||||||       ||| ||||||||||| || |||  ||| ||||    
T  30086775 aaaatataagtaaaaaagaccaacttttatgtcattattatgttttttcaaacaaatcatc-ttttccaatgtaaaattaaatacaaattgcattcaatt 30086677  T
Q  186 tgttctcctttttatt 201  Q
    | ||||||||||||||    
T  30086676 tattctcctttttatt 30086661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 35462945 - 35462831
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||| ||||       ||| |||||||||||||| |||  ||| ||||    
T  35462945 aaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaaacatc-tttttcaatgtaaaattaaatgcaaatttcattcaatt 35462847  T
Q  186 tgttctcctttttatt 201  Q
    | || |||||||||||    
T  35462846 tattatcctttttatt 35462831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 146
Target Start/End: Original strand, 13146661 - 13146721
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatc 146  Q
    |||||||||  ||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  13146661 aaaatataaacaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatc 13146721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 16286310 - 16286196
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||||||||||||| ||||||||| | ||| ||||||||||| |||||||| |||       ||| ||||||||||||||  ||  ||||| ||    
T  16286310 aaaatataagtaaaaaagacaaacttttatgcaatttttatgttttttcaaacaaattatc-tttttcaatgtaaaattaaatgcaagttgcatttagtt 16286212  T
Q  186 tgttctcctttttatt 201  Q
    ||||||||||||||||    
T  16286211 tgttctcctttttatt 16286196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 24432627 - 24432513
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||| |||||| |||||||||||||||||| |||| |||||| ||| ||||||||       ||| ||||||||||||||  ||  ||||||||    
T  24432627 aaaatataagcaaaaaaaaccaacttttatactatttttatattttttcaaataaatcatc-ttttccaatgtaaaattaaatgcaagttgcatttaatt 24432529  T
Q  186 tgttctcctttttatt 201  Q
    |||| |||||||||||    
T  24432528 tgttatcctttttatt 24432513  T

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Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 24439504 - 24439618
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgttttttaaac--aaatcatcnnnnnnnaatataaaattaaatgcagattatatttaat 184  Q
    |||||||||| |||||||| ||||||||||  |||||||||||||||| |||  ||||||||       ||  |||||||||||||| |||  ||| |||    
T  24439504 aaaatataagcaaaaaagatcaacttttatgttattattatgttttttcaacaaaaatcatc--tttccaaagtaaaattaaatgcaaattgcattcaat 24439601  T
Q  185 ttgttctcctttttatt 201  Q
    |||||||||||||||||    
T  24439602 ttgttctcctttttatt 24439618  T

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Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 31317030 - 31316914
Alignment:
Q  85 ctaaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaa 183  Q
    |||||||||||| |||||||| ||||||||||  |||| ||||||||||| ||||||||||||       ||| ||||||||||||||  ||  ||||||    
T  31317030 ctaaaatataagcaaaaaagatcaacttttatgttatttttatgttttttcaaacaaatcatc-tttttcaatgtaaaattaaatgcaagttgcatttaa 31316932  T
Q  184 tttgttctcctttttatt 201  Q
    | ||||| ||||||||||    
T  31316931 tctgttcacctttttatt 31316914  T

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Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 12638822 - 12638935
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 185  Q
    |||||||||| ||||||||| ||||||||| ||||||||||||||||| |||||||| ||        ||| |||||||||||||| |||  ||| ||||    
T  12638822 aaaatataag-aaaaaagactaacttttatgctattattatgttttttcaaacaaattat-ttttttcaatgtaaaattaaatgcaaattgcattcaatt 12638919  T
Q  186 tgttctcctttttatt 201  Q
    |||||| |||||||||    
T  12638920 tgttcttctttttatt 12638935  T

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Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 134
Target Start/End: Original strand, 8143868 - 8143913
Alignment:
Q  89 aatataagtaaaaaagaccaacttttatactattattatgtttttt 134  Q
    |||||||| |||||||| |||||||||| |||||||||||||||||    
T  8143868 aatataagcaaaaaagatcaacttttatgctattattatgtttttt 8143913  T

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Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 146
Target Start/End: Complemental strand, 25962679 - 25962619
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatgtttttt-aaacaaatcatc 146  Q
    |||||||||| |||||| || ||||||||| ||||| ||||||||||| ||||||||||||    
T  25962679 aaaatataagcaaaaaatacaaacttttatgctatttttatgttttttcaaacaaatcatc 25962619  T

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Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 87 - 128
Target Start/End: Original strand, 32433587 - 32433628
Alignment:
Q  87 aaaatataagtaaaaaagaccaacttttatactattattatg 128  Q
    |||||||||| ||||||||| || ||||||||||||||||||    
T  32433587 aaaatataagcaaaaaagacaaatttttatactattattatg 32433628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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