View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16845_high_6 (Length: 275)
Name: NF16845_high_6
Description: NF16845
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16845_high_6 |
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Alignment Details
Target: chr1 (Bit Score: 128; Significance: 3e-66; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 132 - 263
Target Start/End: Original strand, 27986060 - 27986191
Alignment:
| Q |
132 |
ttttttcttgatgtttctcaaggagtacaaacgtgagacatgtaaatatgatcatttttctccataaaacacaaccaaagagggaatcttggttctcttc |
231 |
Q |
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| T |
27986060 |
ttttttcttgatgtttcttaaggagtacaaacgtgagacatgtaaatatgatcatttttctccataaaacacaaccaaagagggaatcttggttctcttc |
27986159 |
T |
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| Q |
232 |
aaaatctgctcttccattgaagcatccatatt |
263 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
27986160 |
aaaatctgctcttccattgaagcatccatatt |
27986191 |
T |
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