View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16845_low_15 (Length: 251)
Name: NF16845_low_15
Description: NF16845
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16845_low_15 |
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Alignment Details
Target: chr8 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 38372438 - 38372206
Alignment:
| Q |
1 |
cctttcctgccactgaaaatgtcaacaataccatgtaaataagattgatttttcatgtcttaaattgaccttaggaacaccttttgtcggtagttgcata |
100 |
Q |
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| T |
38372438 |
cctttcctgccactgaaaatgtcaacaataccatgtaaataagattgatttttcatgtcttaaattgaccttaggaacaccttttgtcggtagttgcata |
38372339 |
T |
|
| Q |
101 |
aacgaataacggaatcatcatttaatttgcattgcatggcaggtttttggaaactttcaagactattttagtagtctttctaccatgcttcaacctgaga |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38372338 |
aacgaataacggaatcatcatttaatttgcattgcatggcaggtttttggaaactttcaagactattttagtagtctttctaccatgcttcaacctgaga |
38372239 |
T |
|
| Q |
201 |
aacgtgcttgtaataaaaatatactagtaagtt |
233 |
Q |
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||||||||||||||||||||||||||||||||| |
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| T |
38372238 |
aacgtgcttgtaataaaaatatactagtaagtt |
38372206 |
T |
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