View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16845_low_8 (Length: 391)

Name: NF16845_low_8
Description: NF16845
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16845_low_8
NF16845_low_8
[»] chr3 (37 HSPs)
chr3 (68-374)||(30709973-30710279)
chr3 (279-374)||(36028913-36029010)
chr3 (279-374)||(27026754-27026850)
chr3 (278-374)||(1417075-1417171)
chr3 (277-374)||(39040173-39040271)
chr3 (279-374)||(27038100-27038195)
chr3 (279-374)||(8370669-8370766)
chr3 (279-374)||(35925292-35925387)
chr3 (296-374)||(16264176-16264254)
chr3 (297-374)||(47924051-47924128)
chr3 (296-364)||(3323755-3323823)
chr3 (296-374)||(26298809-26298887)
chr3 (279-374)||(1305761-1305856)
chr3 (279-374)||(32143133-32143228)
chr3 (279-374)||(1417671-1417766)
chr3 (69-145)||(30712565-30712641)
chr3 (279-374)||(40592965-40593063)
chr3 (296-374)||(3716184-3716263)
chr3 (279-374)||(6794894-6794988)
chr3 (296-374)||(47649567-47649646)
chr3 (281-374)||(1309668-1309761)
chr3 (279-374)||(33386848-33386942)
chr3 (306-374)||(40844489-40844557)
chr3 (279-334)||(18554509-18554563)
chr3 (279-374)||(48438025-48438119)
chr3 (296-350)||(24695369-24695423)
chr3 (314-374)||(27452803-27452864)
chr3 (279-364)||(37466102-37466186)
chr3 (314-374)||(27975131-27975191)
chr3 (277-374)||(27986626-27986722)
chr3 (299-350)||(8126531-8126582)
chr3 (299-345)||(21711055-21711102)
chr3 (279-333)||(2671823-2671876)
chr3 (279-333)||(7167051-7167105)
chr3 (300-334)||(28504090-28504124)
chr3 (300-333)||(30236448-30236481)
chr3 (294-334)||(8477187-8477226)
[»] chr2 (30 HSPs)
chr2 (279-374)||(42039861-42039956)
chr2 (279-374)||(23078664-23078759)
chr2 (279-374)||(10707445-10707540)
chr2 (279-374)||(13569137-13569233)
chr2 (295-374)||(36757953-36758032)
chr2 (279-374)||(34388669-34388764)
chr2 (279-374)||(16940401-16940496)
chr2 (279-374)||(17011066-17011161)
chr2 (278-374)||(28259369-28259466)
chr2 (279-371)||(20522031-20522122)
chr2 (279-374)||(3491563-3491658)
chr2 (279-374)||(8390345-8390441)
chr2 (279-374)||(10445637-10445732)
chr2 (279-374)||(21629762-21629855)
chr2 (303-374)||(33528813-33528884)
chr2 (275-374)||(8039866-8039965)
chr2 (279-374)||(14699190-14699285)
chr2 (279-374)||(17865014-17865108)
chr2 (296-374)||(34682526-34682605)
chr2 (279-374)||(25403443-25403538)
chr2 (300-374)||(25398326-25398400)
chr2 (311-374)||(31055884-31055947)
chr2 (296-334)||(32178421-32178459)
chr2 (296-338)||(39482762-39482804)
chr2 (274-334)||(9296637-9296696)
chr2 (307-363)||(33117974-33118030)
chr2 (296-351)||(40014755-40014810)
chr2 (279-333)||(11099163-11099217)
chr2 (296-359)||(27149073-27149134)
chr2 (295-374)||(40738667-40738746)
[»] chr5 (21 HSPs)
chr5 (279-374)||(14520039-14520134)
chr5 (295-363)||(11917178-11917246)
chr5 (277-333)||(213790-213846)
chr5 (279-374)||(15464343-15464438)
chr5 (279-374)||(19588557-19588651)
chr5 (279-374)||(42127601-42127695)
chr5 (296-374)||(11182026-11182104)
chr5 (296-374)||(28832087-28832165)
chr5 (298-374)||(9353522-9353599)
chr5 (279-374)||(36932541-36932635)
chr5 (279-348)||(42126625-42126693)
chr5 (278-374)||(38191982-38192078)
chr5 (278-374)||(38219207-38219303)
chr5 (296-363)||(3880129-3880197)
chr5 (279-374)||(35387474-35387569)
chr5 (296-374)||(17004151-17004230)
chr5 (296-334)||(10281689-10281727)
chr5 (278-371)||(24135658-24135751)
chr5 (279-333)||(31180079-31180133)
chr5 (279-324)||(24555833-24555877)
chr5 (279-324)||(24596864-24596908)
[»] scaffold0036 (1 HSPs)
scaffold0036 (279-374)||(85495-85590)
[»] chr4 (24 HSPs)
chr4 (279-374)||(16624201-16624297)
chr4 (279-374)||(38152632-38152727)
chr4 (279-370)||(16630876-16630968)
chr4 (295-374)||(5147503-5147582)
chr4 (279-347)||(8689697-8689765)
chr4 (278-374)||(25862214-25862309)
chr4 (295-374)||(5143085-5143164)
chr4 (276-371)||(10047187-10047281)
chr4 (296-374)||(54867009-54867087)
chr4 (279-374)||(5269386-5269481)
chr4 (279-329)||(5397069-5397119)
chr4 (314-374)||(5396866-5396926)
chr4 (279-374)||(28468718-28468813)
chr4 (296-374)||(39245820-39245898)
chr4 (296-374)||(3796713-3796792)
chr4 (296-374)||(24333637-24333716)
chr4 (279-374)||(31985824-31985919)
chr4 (279-351)||(34496038-34496108)
chr4 (279-374)||(42599769-42599863)
chr4 (279-374)||(6743612-6743706)
chr4 (279-357)||(5112052-5112128)
chr4 (277-333)||(29760447-29760503)
chr4 (336-374)||(3777417-3777455)
chr4 (296-360)||(1983505-1983568)
[»] scaffold0087 (2 HSPs)
scaffold0087 (279-374)||(37024-37119)
scaffold0087 (298-374)||(44151-44227)
[»] chr8 (19 HSPs)
chr8 (279-374)||(4455838-4455933)
chr8 (279-374)||(19175945-19176044)
chr8 (281-374)||(5702675-5702768)
chr8 (298-371)||(7412166-7412239)
chr8 (296-374)||(9766012-9766090)
chr8 (279-374)||(19752585-19752681)
chr8 (279-374)||(26287713-26287808)
chr8 (279-374)||(26312964-26313059)
chr8 (279-374)||(31071420-31071516)
chr8 (296-374)||(6127045-6127124)
chr8 (296-350)||(4696819-4696873)
chr8 (279-374)||(1262143-1262238)
chr8 (279-362)||(26300958-26301041)
chr8 (296-371)||(26403425-26403501)
chr8 (279-335)||(28307368-28307422)
chr8 (278-333)||(36979183-36979238)
chr8 (279-359)||(7493275-7493352)
chr8 (300-333)||(10689379-10689412)
chr8 (279-351)||(6813489-6813559)
[»] chr6 (17 HSPs)
chr6 (279-374)||(5017664-5017759)
chr6 (279-374)||(31936398-31936493)
chr6 (275-374)||(5572788-5572886)
chr6 (298-374)||(5757668-5757744)
chr6 (298-374)||(21355867-21355943)
chr6 (277-371)||(31086657-31086751)
chr6 (279-374)||(18232655-18232750)
chr6 (279-374)||(10077357-10077451)
chr6 (296-374)||(21801542-21801618)
chr6 (279-374)||(31979324-31979418)
chr6 (279-374)||(26258191-26258286)
chr6 (278-363)||(24436169-24436253)
chr6 (296-350)||(4629788-4629843)
chr6 (279-334)||(5675003-5675057)
chr6 (279-333)||(30126031-30126084)
chr6 (279-374)||(22708829-22708924)
chr6 (296-351)||(27165531-27165584)
[»] chr1 (27 HSPs)
chr1 (279-374)||(21536761-21536856)
chr1 (297-374)||(26645089-26645166)
chr1 (278-374)||(3281519-3281613)
chr1 (298-375)||(37069597-37069674)
chr1 (279-374)||(29651620-29651715)
chr1 (279-374)||(40816925-40817020)
chr1 (279-374)||(775483-775577)
chr1 (279-374)||(47099015-47099111)
chr1 (299-374)||(47103032-47103107)
chr1 (296-374)||(16124709-16124787)
chr1 (279-374)||(19359037-19359132)
chr1 (296-374)||(27104560-27104639)
chr1 (296-350)||(13598223-13598277)
chr1 (296-374)||(19072753-19072831)
chr1 (296-374)||(19120643-19120721)
chr1 (294-374)||(19361627-19361707)
chr1 (294-374)||(19380267-19380347)
chr1 (279-371)||(24202962-24203054)
chr1 (295-371)||(32889265-32889341)
chr1 (279-374)||(13604815-13604909)
chr1 (296-374)||(9476089-9476168)
chr1 (296-370)||(47704133-47704208)
chr1 (296-351)||(9024045-9024100)
chr1 (279-357)||(50521312-50521389)
chr1 (301-357)||(17345728-17345782)
chr1 (279-324)||(47704222-47704266)
chr1 (314-374)||(22819270-22819330)
[»] scaffold1805 (1 HSPs)
scaffold1805 (279-374)||(1217-1313)
[»] chr7 (28 HSPs)
chr7 (277-374)||(2479146-2479244)
chr7 (279-374)||(9190199-9190294)
chr7 (296-374)||(55766-55844)
chr7 (298-375)||(47263509-47263586)
chr7 (279-374)||(9185354-9185449)
chr7 (279-374)||(49091472-49091567)
chr7 (279-374)||(9235749-9235843)
chr7 (295-374)||(21983108-21983187)
chr7 (295-374)||(21988732-21988811)
chr7 (279-374)||(46516503-46516597)
chr7 (296-374)||(4796862-4796940)
chr7 (279-374)||(20283900-20283994)
chr7 (279-374)||(23403205-23403299)
chr7 (296-374)||(29159629-29159708)
chr7 (295-374)||(35960640-35960719)
chr7 (279-374)||(2580199-2580293)
chr7 (279-374)||(18408576-18408671)
chr7 (279-374)||(18413453-18413548)
chr7 (298-374)||(44848877-44848953)
chr7 (279-362)||(3047063-3047144)
chr7 (296-350)||(33332666-33332720)
chr7 (279-374)||(21645818-21645913)
chr7 (296-331)||(2647962-2647997)
chr7 (314-359)||(28617435-28617480)
chr7 (279-334)||(1533676-1533730)
chr7 (276-374)||(21639617-21639715)
chr7 (279-333)||(2057765-2057819)
chr7 (277-333)||(20357784-20357839)
[»] scaffold0098 (1 HSPs)
scaffold0098 (298-374)||(45085-45160)
[»] scaffold0188 (2 HSPs)
scaffold0188 (278-374)||(24236-24332)
scaffold0188 (279-374)||(18143-18238)
[»] scaffold0184 (1 HSPs)
scaffold0184 (279-359)||(29697-29777)
[»] scaffold0078 (2 HSPs)
scaffold0078 (279-359)||(43067-43147)
scaffold0078 (295-357)||(23356-23418)
[»] scaffold0006 (3 HSPs)
scaffold0006 (296-350)||(5508-5562)
scaffold0006 (279-374)||(133472-133566)
scaffold0006 (296-374)||(2319-2397)
[»] scaffold0176 (1 HSPs)
scaffold0176 (279-350)||(17077-17147)
[»] scaffold0148 (1 HSPs)
scaffold0148 (296-334)||(10554-10592)
[»] scaffold0140 (1 HSPs)
scaffold0140 (316-371)||(8614-8670)


Alignment Details
Target: chr3 (Bit Score: 279; Significance: 1e-156; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 68 - 374
Target Start/End: Complemental strand, 30710279 - 30709973
Alignment:
Q  68 ggtaggagagaaagtgaatagatagttagaagaaggaaagatacatatttagtaaatgatatatttgccattataaaagagtgagatgataatgtaaaaa 167  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  30710279 ggtaggagagaaagtgaatagatagttagaagaaggaaagatacatatttagtaaatgacatatttgccattataaaaaagtgagatgataatgtaaaaa 30710180  T
Q  168 tgagcaggcgtgtgtgcatgcgtgttcatgcagcgtataaccaacaaaaacttccatttacatgcacctgacttgcaaatattgttaaatgcttagaaaa 267  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30710179 tgagcgggcgtgtgtgcatgcgtgttcatgcagcgtacaaccaacaaaaacttccatttacatgcacctgacttgcaaatattgttaaatgcttagaaaa 30710080  T
Q  268 ttaaaaatttgtgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaa 367  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| ||    
T  30710079 ttaaaaatttgtgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaaggaagtggtaatcaatgtgtaaagtgtctccaa 30709980  T
Q  368 gcaacaa 374  Q
    |||||||    
T  30709979 gcaacaa 30709973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 279 - 374
Target Start/End: Original strand, 36028913 - 36029010
Alignment:
Q  279 tgttgtgaattccggtaaaa--atcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  36028913 tgttgtgaattccggtaaaaaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagtggtaatcaatgtgtaaagtgtctccaagcaacaa 36029010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 279 - 374
Target Start/End: Original strand, 27026754 - 27026850
Alignment:
Q  279 tgttgtgaattccggtaaaa-atcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||||    
T  27026754 tgttgtgaattccggtaaaaaatcacaccaatgaataacaaagatgtgtggagcaaatgaaatggtaatcaatgtgtaaagtgtctccaagcaacaa 27026850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 278 - 374
Target Start/End: Original strand, 1417075 - 1417171
Alignment:
Q  278 gtgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    ||||||||||||||||  |||||||||||||||||||| |||||||||||||| ||| |||| |||||||||||||||||||||||| |||||||||    
T  1417075 gtgttgtgaattccggacaaaatcacaccaatgaataataaagatgtgtggagtaaaggaagtggtaatcaatgtgtaaagtgtctccaagcaacaa 1417171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 277 - 374
Target Start/End: Complemental strand, 39040271 - 39040173
Alignment:
Q  277 tgtgttgtgaattccggtaaaaa-tcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    ||||||||||||||||||||||| |||||||||| ||||| ||||||||||||| |||| |||| |||||||||||||||||||||||| |||||||||    
T  39040271 tgtgttgtgaattccggtaaaaaatcacaccaataaataataaagatgtgtggaacaaaggaagtggtaatcaatgtgtaaagtgtctccaagcaacaa 39040173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 279 - 374
Target Start/End: Original strand, 27038100 - 27038195
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||| |  |||||||||||||||||||||| |||||||||||||||||||||  |||||||||||||||||||||||  |||||||||    
T  27038100 tgttgtgaattcggtaaaaaatcacaccaatgaataactaagatgtgtggagcaaatgaaatggtaatcaatgtgtaaagtgtcttcaagcaacaa 27038195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 279 - 374
Target Start/End: Complemental strand, 8370766 - 8370669
Alignment:
Q  279 tgttgtgaattccggtaaaaa--tcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||||||||||||  ||||| ||||||| || |||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||||    
T  8370766 tgttgtgaattccggtaaaaaaatcacatcaatgaaaaataaagatgtgtggagtaaaggaagaggtaatcaatgtgtaaagtgtctccaagcaacaa 8370669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 279 - 374
Target Start/End: Original strand, 35925292 - 35925387
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    ||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||  | | ||||||||||||||||| |||||| ||| |||||    
T  35925292 tgttgtgaattccggtaaaaaccacaccaatgaaaaacaaagatatgtggagcaaagcaggtggtaatcaatgtgtaaaatgtctccaagtaacaa 35925387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 296 - 374
Target Start/End: Original strand, 16264176 - 16264254
Alignment:
Q  296 aaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||||||||||||||||| |||||||||||  |||| |||||||||||||||||||||||| ||| |||||    
T  16264176 aaaatcacaccaatgaataacaaagacgtgtggagcaacagaagtggtaatcaatgtgtaaagtgtctccaagaaacaa 16264254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 297 - 374
Target Start/End: Complemental strand, 47924128 - 47924051
Alignment:
Q  297 aaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||||||||||||||||||||||||| ||| |||| |||||||||||  ||||||||||| |||||||||    
T  47924128 aaatcacaccaatgaataacaaagatgtgtggagtaaaggaagtggtaatcaatggataaagtgtctccaagcaacaa 47924051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 296 - 364
Target Start/End: Complemental strand, 3323823 - 3323755
Alignment:
Q  296 aaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctc 364  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||  |||||||||||    
T  3323823 aaaatcacaccaatgaataacaaagatgtgtggagcaaaggaagtggtaatcaatgcataaagtgtctc 3323755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 296 - 374
Target Start/End: Original strand, 26298809 - 26298887
Alignment:
Q  296 aaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||||||||||||||||||||||||| |||| |||| |||||||||||  ||||||||||| || ||||||    
T  26298809 aaaatcacaccaatgaataacaaagatgtgtggatcaaaggaagtggtaatcaatggataaagtgtctccaaacaacaa 26298887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 279 - 374
Target Start/End: Original strand, 1305761 - 1305856
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaat-gaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||| | ||||| ||||||||||| | |||||||||||||||||||||  |||| ||||||| |||||||||||||||| |||||||||    
T  1305761 tgttgtgaattcggataaaactcacaccaatgta-aacaaagatgtgtggagcaaaaagaagtggtaatctatgtgtaaagtgtctccaagcaacaa 1305856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 279 - 374
Target Start/End: Original strand, 32143133 - 32143228
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatg-aagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||| | ||||| ||||||||||| | ||||||||||||||||||||| | ||| ||||||| |||||||||||||||| |||||||||    
T  32143133 tgttgtgaattcggataaaactcacaccaatgta-aacaaagatgtgtggagcaaaaggaagtggtaatctatgtgtaaagtgtctccaagcaacaa 32143228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 279 - 374
Target Start/End: Complemental strand, 1417766 - 1417671
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||  ||  ||||||||||||||||| ||||||||||||||||||||| |||| ||||||||||   ||||||||||  |||||||||    
T  1417766 tgttgtgaattttggacaaaatcacaccaatgaaaaacaaagatgtgtggagcaaaggaagtggtaatcaatagataaagtgtcttcaagcaacaa 1417671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 69 - 145
Target Start/End: Complemental strand, 30712641 - 30712565
Alignment:
Q  69 gtaggagagaaagtgaatagatagttagaagaaggaaagatacatatttagtaaatgatatatttgccattataaaa 145  Q
    ||||||||||||   |||||||||||||| ||| ||||||||| |||||||||||| ||||||||||| ||||||||    
T  30712641 gtaggagagaaaactaatagatagttagaggaaagaaagatacgtatttagtaaattatatatttgcccttataaaa 30712565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 279 - 374
Target Start/End: Complemental strand, 40593063 - 40592965
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaa---agatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||| |   |||||||||||||||||||||||   |||||||||||||||| |||| |||||||||||  |||| |||||| |||||||||    
T  40593063 tgttgtgaattcggaacaaaatcacaccaatgaataacaacaaagatgtgtggagcaaaggaagtggtaatcaatggataaaatgtctccaagcaacaa 40592965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 296 - 374
Target Start/End: Complemental strand, 3716263 - 3716184
Alignment:
Q  296 aaaatcacaccaatgaataacaaagatgtgtggagc-aaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||   ||||||||||  |||||||||    
T  3716263 aaaatcacaccaatgaataacaaagatgtgtggagcaaaaggaagtggtaatcaatagataaagtgtctacaagcaacaa 3716184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 279 - 374
Target Start/End: Complemental strand, 6794988 - 6794894
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||| ||  ||||||||||||||||| ||||| ||||||||||||||| |||| ||||||||||    |||||||||| |||||||||    
T  6794988 tgttgtgaattc-ggacaaaatcacaccaatgaaaaacaacgatgtgtggagcaaaggaagtggtaatcaatagaaaaagtgtctccaagcaacaa 6794894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 296 - 374
Target Start/End: Original strand, 47649567 - 47649646
Alignment:
Q  296 aaaatcacaccaatgaataacaaagatgtgtggagc-aaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||||||||||||||||||||||||| | ||| |||| ||||||||||   ||||||||||| |||||||||    
T  47649567 aaaatcacaccaatgaataacaaagatgtgtggaacaaaaggaagtggtaatcaatagataaagtgtctccaagcaacaa 47649646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 281 - 374
Target Start/End: Original strand, 1309668 - 1309761
Alignment:
Q  281 ttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatg-aagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||| | ||||| ||||||||||| | ||||||||||||||||||||| | ||| ||||||| |||||||||||||||  |||||||||    
T  1309668 ttgtgaattcggataaaactcacaccaatgta-aacaaagatgtgtggagcaaaaggaagtggtaatctatgtgtaaagtgtcttcaagcaacaa 1309761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 279 - 374
Target Start/End: Complemental strand, 33386942 - 33386848
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatg-aagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||| ||||  ||| ||||||||||| | ||||||||||||||||| ||| | ||| |||||||||||||||||||||||| |||||||||    
T  33386942 tgttgtgaat-ccggacaaactcacaccaatgta-aacaaagatgtgtggagtaaaaggaagtggtaatcaatgtgtaaagtgtctccaagcaacaa 33386848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 306 - 374
Target Start/End: Original strand, 40844489 - 40844557
Alignment:
Q  306 caatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    ||||||||||||||||||||||||| ||| |||| ||||||||||   ||||||||||| |||||||||    
T  40844489 caatgaataacaaagatgtgtggagtaaaagaagtggtaatcaatagataaagtgtctccaagcaacaa 40844557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 279 - 334
Target Start/End: Complemental strand, 18554563 - 18554509
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaa 334  Q
    |||||||||||| ||  |||||||||||||||||||||||||||||||||||||||    
T  18554563 tgttgtgaattc-ggacaaaatcacaccaatgaataacaaagatgtgtggagcaaa 18554509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 279 - 374
Target Start/End: Original strand, 48438025 - 48438119
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||| ||  ||||||||| ||||||||||||| ||||||||||||||| |||  ||||||||||   |||||| |||| |||||||||    
T  48438025 tgttgtgaattc-ggacaaaatcacatcaatgaataacaaggatgtgtggagcaaaggaaatggtaatcaatagataaagtatctccaagcaacaa 48438119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 296 - 350
Target Start/End: Complemental strand, 24695423 - 24695369
Alignment:
Q  296 aaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaat 350  Q
    |||||||||| ||||||||| |||||||||||||||||| |||| ||||||||||    
T  24695423 aaaatcacacaaatgaataataaagatgtgtggagcaaaggaagtggtaatcaat 24695369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 314 - 374
Target Start/End: Original strand, 27452803 - 27452864
Alignment:
Q  314 aacaaagatgtgtggagcaaatg-aagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    ||||||||||||||||||||| | ||| ||||||| |||||||||||||||| |||||||||    
T  27452803 aacaaagatgtgtggagcaaaaggaagtggtaatctatgtgtaaagtgtctccaagcaacaa 27452864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 279 - 364
Target Start/End: Original strand, 37466102 - 37466186
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctc 364  Q
    |||||||||||| ||  |||||||||||||| ||||||||||||||| |||||||| |||  |||||||||||  | |||||||||    
T  37466102 tgttgtgaattc-ggacaaaatcacaccaataaataacaaagatgtgaggagcaaaggaaatggtaatcaatggattaagtgtctc 37466186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 314 - 374
Target Start/End: Complemental strand, 27975191 - 27975131
Alignment:
Q  314 aacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    ||||||||| ||||||| ||| |||| | |||||||||||||||||||||| |||||||||    
T  27975191 aacaaagatatgtggagtaaaggaagtgataatcaatgtgtaaagtgtctccaagcaacaa 27975131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 277 - 374
Target Start/End: Complemental strand, 27986722 - 27986626
Alignment:
Q  277 tgtgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatg-aagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||||| ||  ||| ||||||||||| | ||||||||||| ||||||||| | ||| ||||||| |||||||||||||||  |||||||||    
T  27986722 tgtgttgtgaattc-ggacaaactcacaccaatgta-aacaaagatgtatggagcaaaaggaagtggtaatctatgtgtaaagtgtcttcaagcaacaa 27986626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 299 - 350
Target Start/End: Original strand, 8126531 - 8126582
Alignment:
Q  299 atcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaat 350  Q
    |||| |||||| |||||||||||||||||||||||| |||| |||| |||||    
T  8126531 atcataccaataaataacaaagatgtgtggagcaaaggaagtggtattcaat 8126582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 299 - 345
Target Start/End: Original strand, 21711055 - 21711102
Alignment:
Q  299 atcacaccaa-tgaataacaaagatgtgtggagcaaatgaagaggtaa 345  Q
    |||||||||| |||||||||||||||||||||||||| |||| |||||    
T  21711055 atcacaccaaatgaataacaaagatgtgtggagcaaaggaagtggtaa 21711102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 333
Target Start/End: Complemental strand, 2671876 - 2671823
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaa 333  Q
    |||||||||| | | ||||| ||||||||||||| ||||||||||||||||||||    
T  2671876 tgttgtgaatccggttaaaactcacaccaatgaa-aacaaagatgtgtggagcaa 2671823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 333
Target Start/End: Original strand, 7167051 - 7167105
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaa 333  Q
    |||||||||| | | | ||| ||||||||||||| ||||||||||||||||||||    
T  7167051 tgttgtgaatccggttgaaactcacaccaatgaaaaacaaagatgtgtggagcaa 7167105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 300 - 334
Target Start/End: Complemental strand, 28504124 - 28504090
Alignment:
Q  300 tcacaccaatgaataacaaagatgtgtggagcaaa 334  Q
    ||||||||||||||||||| |||||||||||||||    
T  28504124 tcacaccaatgaataacaatgatgtgtggagcaaa 28504090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 333
Target Start/End: Complemental strand, 30236481 - 30236448
Alignment:
Q  300 tcacaccaatgaataacaaagatgtgtggagcaa 333  Q
    |||||||||| |||||||||||||||||||||||    
T  30236481 tcacaccaataaataacaaagatgtgtggagcaa 30236448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 334
Target Start/End: Original strand, 8477187 - 8477226
Alignment:
Q  294 taaaaatcacaccaatgaataacaaagatgtgtggagcaaa 334  Q
    ||||| ||||||||||||| |||||||||||||||||||||    
T  8477187 taaaactcacaccaatgaa-aacaaagatgtgtggagcaaa 8477226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 84; Significance: 8e-40; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 279 - 374
Target Start/End: Complemental strand, 42039956 - 42039861
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||    
T  42039956 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaaggaagtggtaatcaatgtgtaaagtgtctccaagcaacaa 42039861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 279 - 374
Target Start/End: Complemental strand, 23078759 - 23078664
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||    
T  23078759 tgttgtgaattccggtaaaaatcacaccaatgaaaaacaaagatgtgtggagcaaaggaagtggtaatcaatgtgtaaagtgtctccaagcaacaa 23078664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 279 - 374
Target Start/End: Complemental strand, 10707540 - 10707445
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||    
T  10707540 tgttgtgaatttcggtaaaaatcacacccatgaataacaaagatgtgtggagcaaaagaagtggtaatcaatgtgtaaagtgtctccaagcaacaa 10707445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 279 - 374
Target Start/End: Original strand, 13569137 - 13569233
Alignment:
Q  279 tgttgtgaattccggtaaaa-atcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||| || ||||||    
T  13569137 tgttgtgaattccggtaaaaaatcacaccaatgaataacaaagatgtgtggagtaaaggaagtggtaatcaatgtgtaaagtgtctccaaacaacaa 13569233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 295 - 374
Target Start/End: Complemental strand, 36758032 - 36757953
Alignment:
Q  295 aaaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||    
T  36758032 aaaaatcacaccaatgaataacaaagatgtgtggagcaaaggaagtggtaatcaatgtgtaaagtgtctccaagcaacaa 36757953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 279 - 374
Target Start/End: Original strand, 34388669 - 34388764
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||| |||||||||||||||||| |||||| ||||||||||||||||| |||| |||||||||| ||||||||||||  |||||||||    
T  34388669 tgttgtgaattctggtaaaaatcacaccaataaataacgaagatgtgtggagcaaaggaagtggtaatcaatatgtaaagtgtcttcaagcaacaa 34388764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 279 - 374
Target Start/End: Complemental strand, 16940496 - 16940401
Alignment:
Q  279 tgttgtgaattccggta-aaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||  ||||||||||||| |||||||    
T  16940496 tgttgtgaattc-ggtacaaaatcacaccaatgaataacaaagatgtgtggagcaaaggaagtggtaatcaatgaataaagtgtctctatgcaacaa 16940401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 279 - 374
Target Start/End: Complemental strand, 17011161 - 17011066
Alignment:
Q  279 tgttgtgaattccggta-aaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||  ||||||||||||| |||||||    
T  17011161 tgttgtgaattc-ggtacaaaatcacaccaatgaataacaaagatgtgtggagcaaaggaagtggtaatcaatgaataaagtgtctctatgcaacaa 17011066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 278 - 374
Target Start/End: Complemental strand, 28259466 - 28259369
Alignment:
Q  278 gtgttgtgaattccggtaaa-aatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    ||||||||| |||||||  | ||||||||||||||| ||||||||||||||||||||| ||||   |||||||||||||||||||||| |||||||||    
T  28259466 gtgttgtgagttccggttgataatcacaccaatgaaaaacaaagatgtgtggagcaaaggaagtaataatcaatgtgtaaagtgtctccaagcaacaa 28259369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 279 - 371
Target Start/End: Original strand, 20522031 - 20522122
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaa 371  Q
    |||||||||||| ||  ||||||||||||||||||||||||||||||||||| ||| |||| |||||||||||  ||||||||||| ||||||    
T  20522031 tgttgtgaattc-ggacaaaatcacaccaatgaataacaaagatgtgtggagaaaaggaagtggtaatcaatggataaagtgtctccaagcaa 20522122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 279 - 374
Target Start/End: Original strand, 3491563 - 3491658
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatg-aagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||| | ||||| ||||||||||| | ||||||||||||||||||||| | ||| ||||||| |||||||||||||||| |||||||||    
T  3491563 tgttgtgaattcggataaaactcacaccaatgta-aacaaagatgtgtggagcaaaaggaagtggtaatctatgtgtaaagtgtctccaagcaacaa 3491658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 279 - 374
Target Start/End: Complemental strand, 8390441 - 8390345
Alignment:
Q  279 tgttgtgaattccggta-aaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    ||||||||||||||||| ||||||||||||||||| || |||||||||||||| ||| |||| |||||||||||  |||||||| || || ||||||    
T  8390441 tgttgtgaattccggtacaaaatcacaccaatgaaaaataaagatgtgtggagtaaaggaagtggtaatcaatggataaagtgtatccaaacaacaa 8390345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 279 - 374
Target Start/End: Complemental strand, 10445732 - 10445637
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagc-aaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||| ||  ||||||||||||||||| |||||||||||||||||| ||| |||| |||||||||||  ||||||||||| |||||||||    
T  10445732 tgttgtgaattc-ggacaaaatcacaccaatgaaaaacaaagatgtgtggagcaaaaggaagtggtaatcaatggataaagtgtctccaagcaacaa 10445637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 279 - 374
Target Start/End: Original strand, 21629762 - 21629855
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||| ||  ||||||||||||||||| ||||||||||||||||||||| |||| ||||||||||   ||||||||||| |||||||||    
T  21629762 tgttgtgaattc-ggacaaaatcacaccaatgaa-aacaaagatgtgtggagcaaaggaagtggtaatcaatagataaagtgtctccaagcaacaa 21629855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 303 - 374
Target Start/End: Complemental strand, 33528884 - 33528813
Alignment:
Q  303 caccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||||||||||||||||||||||| |||| |||||||||||  ||||||||| | |||||||||    
T  33528884 caccaatgaataacaaagatgtgtggagcaaaggaagtggtaatcaatggataaagtgtccccaagcaacaa 33528813  T

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Target: chr2; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 8039866 - 8039965
Alignment:
Q  275 tttgtgttgtgaattccggta-aaaatcacaccaatgaataacaaagatgtgtggagc-aaatgaagaggtaatcaatgtgtaaagtgtctctaagcaac 372  Q
    ||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||   ||||||||||  |||||||    
T  8039866 tttgtgttgtgaattc--gtacaaaatcacaccaatgaataacaaagatgtgtggagcaaaaggaagtggtaatcaatagataaagtgtcttcaagcaac 8039963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 279 - 374
Target Start/End: Complemental strand, 14699285 - 14699190
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||| |  ||||| |||| ||||||||| ||| ||||||||||||||| |||| ||||||||||   ||||||||||| |||||||||    
T  14699285 tgttgtgaattcggacaaaaaacacatcaatgaatatcaatgatgtgtggagcaaaggaagtggtaatcaatagataaagtgtctccaagcaacaa 14699190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 279 - 374
Target Start/End: Original strand, 17865014 - 17865108
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||| ||  |||||||||||||||||||||||| |||||||||| ||| |||| |||||||||||  |||| |||||| || ||||||    
T  17865014 tgttgtgaattc-ggacaaaatcacaccaatgaataacaaaaatgtgtggagaaaaggaagtggtaatcaatggataaaatgtctccaaccaacaa 17865108  T

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Target: chr2; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 296 - 374
Target Start/End: Complemental strand, 34682605 - 34682526
Alignment:
Q  296 aaaatcacaccaatgaataacaaagatgtgtggagcaaatg-aagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||| |||||||||||||||||||||||||||||||||| | ||| ||||||||||   ||||||||||| |||||||||    
T  34682605 aaaaccacaccaatgaataacaaagatgtgtggagcaaaagaaagtggtaatcaatagataaagtgtctccaagcaacaa 34682526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 279 - 374
Target Start/End: Original strand, 25403443 - 25403538
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatg-aagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||| | | | ||| ||||||||||| | ||||||||||||||||||||| | ||| ||||||| |||||||||||||||| |||||||||    
T  25403443 tgttgtgaatccggttgaaactcacaccaatgta-aacaaagatgtgtggagcaaaaggaagtggtaatctatgtgtaaagtgtctccaagcaacaa 25403538  T

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Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 300 - 374
Target Start/End: Original strand, 25398326 - 25398400
Alignment:
Q  300 tcacaccaatgaataacaaagatgtgtggagcaaatg-aagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    ||||||||||| | ||||||||||||||||||||| | ||| ||||||| |||||||||||||||| |||||||||    
T  25398326 tcacaccaatgta-aacaaagatgtgtggagcaaaaggaagtggtaatctatgtgtaaagtgtctccaagcaacaa 25398400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 311 - 374
Target Start/End: Original strand, 31055884 - 31055947
Alignment:
Q  311 aataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||||||||||||||| |||| ||||||||||   ||||||||||| |||||||||    
T  31055884 aataacaaagatgtgtggagcaaaggaagtggtaatcaatagataaagtgtctccaagcaacaa 31055947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 296 - 334
Target Start/End: Original strand, 32178421 - 32178459
Alignment:
Q  296 aaaatcacaccaatgaataacaaagatgtgtggagcaaa 334  Q
    |||||||||||||||||||||||||||||||||||||||    
T  32178421 aaaatcacaccaatgaataacaaagatgtgtggagcaaa 32178459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 296 - 338
Target Start/End: Original strand, 39482762 - 39482804
Alignment:
Q  296 aaaatcacaccaatgaataacaaagatgtgtggagcaaatgaa 338  Q
    |||||||||| ||||||||||||||||||||||||||||||||    
T  39482762 aaaatcacacaaatgaataacaaagatgtgtggagcaaatgaa 39482804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 334
Target Start/End: Complemental strand, 9296696 - 9296637
Alignment:
Q  274 atttgtgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaa 334  Q
    |||| |||||||||| | | ||||| ||||||||||||| |||||||||||||||||||||    
T  9296696 atttttgttgtgaatccggttaaaactcacaccaatgaa-aacaaagatgtgtggagcaaa 9296637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 363
Target Start/End: Original strand, 33117974 - 33118030
Alignment:
Q  307 aatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtct 363  Q
    ||||||||||||||||||||||| |||| |||| ||||||||||   ||||||||||    
T  33117974 aatgaataacaaagatgtgtggatcaaaggaagtggtaatcaatagataaagtgtct 33118030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 296 - 351
Target Start/End: Original strand, 40014755 - 40014810
Alignment:
Q  296 aaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatg 351  Q
    ||||||||||||||||  ||||||||||| ||||||||| ||||  ||||||||||    
T  40014755 aaaatcacaccaatgacaaacaaagatgtatggagcaaaggaagtagtaatcaatg 40014810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 333
Target Start/End: Complemental strand, 11099217 - 11099163
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaa 333  Q
    |||||||||| | | | ||| ||||||||||||| ||||||||||||||||||||    
T  11099217 tgttgtgaatccggttgaaactcacaccaatgaaaaacaaagatgtgtggagcaa 11099163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 359
Target Start/End: Complemental strand, 27149134 - 27149073
Alignment:
Q  296 aaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagt 359  Q
    |||||||||||||| ||  ||||||||||||||||||||  ||| | ||||||||| |||||||    
T  27149134 aaaatcacaccaatcaa--acaaagatgtgtggagcaaagaaagtgataatcaatgagtaaagt 27149073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 374
Target Start/End: Original strand, 40738667 - 40738746
Alignment:
Q  295 aaaaatcacaccaatgaataacaaagatgtgtggagcaaatg-aagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||| ||||||||||| | || |||||||||||||| ||| | ||| ||||||| || ||||||||||||| |||||||||    
T  40738667 aaaactcacaccaatgta-aataaagatgtgtggagtaaaaggaagtggtaatctatatgtaaagtgtctccaagcaacaa 40738746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 80; Significance: 2e-37; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 279 - 374
Target Start/End: Original strand, 14520039 - 14520134
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||    
T  14520039 tgttgtgaattccggtgaaaatcacaccaatgaataacaaagatgtgtggagcaaaggaagtggtaatcaatgtgtaaagtgtctccaagcaacaa 14520134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 295 - 363
Target Start/End: Complemental strand, 11917246 - 11917178
Alignment:
Q  295 aaaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtct 363  Q
    ||||||||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||||||||    
T  11917246 aaaaatcacaccaatgaataacaaagatgtgtgaagcaaaggaagtggtaatcaatgtgtaaagtgtct 11917178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 213846 - 213790
Alignment:
Q  277 tgtgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaa 333  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  213846 tgtgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtagagcaa 213790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 279 - 374
Target Start/End: Original strand, 15464343 - 15464438
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatg-aagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||| | ||||| ||||||||||| | ||||||||||||||||||||| | ||| |||||||||||||||||||||||| |||||||||    
T  15464343 tgttgtgaattcggataaaactcacaccaatgta-aacaaagatgtgtggagcaaaaggaagtggtaatcaatgtgtaaagtgtctccaagcaacaa 15464438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 279 - 374
Target Start/End: Original strand, 19588557 - 19588651
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||| ||  ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||   ||||| ||||| |||||||||    
T  19588557 tgttgtgaattc-ggacaaaatcacaccaatgaataacaaagatgtgtggagcaaaggaagtggtaatcaatagataaagcgtctccaagcaacaa 19588651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 279 - 374
Target Start/End: Complemental strand, 42127695 - 42127601
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||| ||  |||||||||| ||||||||||||||||||||||||||||  ||| |||||||||||  ||||||||||| |||||||||    
T  42127695 tgttgtgaattc-ggacaaaatcacactaatgaataacaaagatgtgtggagcaaagaaagtggtaatcaatggataaagtgtctccaagcaacaa 42127601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 296 - 374
Target Start/End: Complemental strand, 11182104 - 11182026
Alignment:
Q  296 aaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||||||||||||||||||||||||||||||  ||| ||||||||||   ||||||||||| |||||||||    
T  11182104 aaaatcacaccaatgaataacaaagatgtgtggagcaaagtaagtggtaatcaatagataaagtgtctccaagcaacaa 11182026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 296 - 374
Target Start/End: Original strand, 28832087 - 28832165
Alignment:
Q  296 aaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    ||||||| ||||||||||||||||||||||||||||||| |||| |||||||||||  ||||||||||  |||||||||    
T  28832087 aaaatcataccaatgaataacaaagatgtgtggagcaaaggaagtggtaatcaatggataaagtgtcttcaagcaacaa 28832165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 298 - 374
Target Start/End: Complemental strand, 9353599 - 9353522
Alignment:
Q  298 aatcacaccaatgaataa-caaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    ||||||||||||||| || ||||||||||||||||||| |||| ||||| |||||||||||||||||| |||||||||    
T  9353599 aatcacaccaatgaaaaaacaaagatgtgtggagcaaaggaagtggtaaacaatgtgtaaagtgtctccaagcaacaa 9353522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 279 - 374
Target Start/End: Complemental strand, 36932635 - 36932541
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatg-aagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||| ||  ||| ||||||||||| | ||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||||    
T  36932635 tgttgtgaattc-ggacaaactcacaccaatgta-aacaaagatgtgtggagcaaaaggaagaggtaatcaatgtgtaaagtgtctccaagcaacaa 36932541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 279 - 348
Target Start/End: Complemental strand, 42126693 - 42126625
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatca 348  Q
    |||||||||||| | ||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  42126693 tgttgtgaattcggataaaa-tcacaccaatgaataacaaagatgtgtggagcaaaggaagtggtaatca 42126625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 278 - 374
Target Start/End: Original strand, 38191982 - 38192078
Alignment:
Q  278 gtgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatg-aagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    ||||||||||| | | | ||| ||||||||||| | ||||||||||||||||||||| | ||| ||||||| |||||||||||||||| |||||||||    
T  38191982 gtgttgtgaatccggttgaaactcacaccaatgta-aacaaagatgtgtggagcaaaaggaagtggtaatctatgtgtaaagtgtctccaagcaacaa 38192078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 278 - 374
Target Start/End: Original strand, 38219207 - 38219303
Alignment:
Q  278 gtgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatg-aagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    ||||||||||| | | | ||| ||||||||||| | ||||||||||||||||||||| | ||| ||||||| |||||||||||||||| |||||||||    
T  38219207 gtgttgtgaatccggttgaaactcacaccaatgta-aacaaagatgtgtggagcaaaaggaagtggtaatctatgtgtaaagtgtctccaagcaacaa 38219303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 296 - 363
Target Start/End: Original strand, 3880129 - 3880197
Alignment:
Q  296 aaaatcacaccaatgaataacaaagatgtgtggagc-aaatgaagaggtaatcaatgtgtaaagtgtct 363  Q
    |||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||   ||||||||||    
T  3880129 aaaatcacaccaatgaataacaaagatgtgtggagcaaaaggaagtggtaatcaatagataaagtgtct 3880197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 279 - 374
Target Start/End: Original strand, 35387474 - 35387569
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatg-aagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||| | | ||||| ||||||||||| | ||||||||||||||||||||| | ||| | ||||| |||||||||||||||| |||||||||    
T  35387474 tgttgtgaatccggttaaaactcacaccaatgta-aacaaagatgtgtggagcaaaaggaagtgataatctatgtgtaaagtgtctccaagcaacaa 35387569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 296 - 374
Target Start/End: Complemental strand, 17004230 - 17004151
Alignment:
Q  296 aaaatcacaccaatgaataacaaagatgtgtggagc-aaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    ||||||||||||||||| |||||||| ||||||||| ||| |||| ||||||||||   ||||||||||| |||||||||    
T  17004230 aaaatcacaccaatgaaaaacaaagaggtgtggagcaaaaggaagtggtaatcaatagataaagtgtctccaagcaacaa 17004151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 296 - 334
Target Start/End: Original strand, 10281689 - 10281727
Alignment:
Q  296 aaaatcacaccaatgaataacaaagatgtgtggagcaaa 334  Q
    |||||||||||||||||||||||||||||||||||||||    
T  10281689 aaaatcacaccaatgaataacaaagatgtgtggagcaaa 10281727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 371
Target Start/End: Original strand, 24135658 - 24135751
Alignment:
Q  278 gtgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagc-aaatgaagaggtaatcaatgtgtaaagtgtctctaagcaa 371  Q
    ||||||||||| | | ||||| ||||||||||||| || ||||||||||||||| ||| | || ||||||| ||| |||||| ||||| ||||||    
T  24135658 gtgttgtgaatccggataaaactcacaccaatgaa-aataaagatgtgtggagcaaaagggagtggtaatctatgagtaaagagtctccaagcaa 24135751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 333
Target Start/End: Original strand, 31180079 - 31180133
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaa 333  Q
    |||||||||| | | | ||| ||||||||||||||||||| ||||||||||||||    
T  31180079 tgttgtgaatccggttgaaactcacaccaatgaataacaatgatgtgtggagcaa 31180133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 324
Target Start/End: Complemental strand, 24555877 - 24555833
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgt 324  Q
    |||||||||||| ||  |||||||||||||||||||||||||||||    
T  24555877 tgttgtgaattc-ggacaaaatcacaccaatgaataacaaagatgt 24555833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 324
Target Start/End: Complemental strand, 24596908 - 24596864
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgt 324  Q
    |||||||||||| ||  |||||||||||||||||||||||||||||    
T  24596908 tgttgtgaattc-ggacaaaatcacaccaatgaataacaaagatgt 24596864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 76; Significance: 5e-35; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 279 - 374
Target Start/End: Original strand, 85495 - 85590
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| |||| |||||||||||||||||||||||| |||||||||    
T  85495 tgttgtgaattccggtaaaaatcacaccaatgaaaaacaaagatgtgtagagcaaaggaagtggtaatcaatgtgtaaagtgtctccaagcaacaa 85590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 73; Significance: 3e-33; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 279 - 374
Target Start/End: Complemental strand, 16624297 - 16624201
Alignment:
Q  279 tgttgtgaattccggtaaaaa-tcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| | |||||||||||||||||||||| |||||||||    
T  16624297 tgttgtgaattccggtaaaaaatcacaccaatgaataacaaagatgtgtggagcaaaggaagtgataatcaatgtgtaaagtgtctccaagcaacaa 16624201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 279 - 374
Target Start/End: Complemental strand, 38152727 - 38152632
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| | |||||| || |||||||||    
T  38152727 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtagagcaaatgaagtggtaatcaatgtatgaagtgtttccaagcaacaa 38152632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 279 - 370
Target Start/End: Complemental strand, 16630968 - 16630876
Alignment:
Q  279 tgttgtgaattccggtaaaaa-tcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagca 370  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||  |||||||||||||||||||||||| |||||    
T  16630968 tgttgtgaatttcggtaaaaaatcacaccaatgaataacaaagatgtgtggagcaaaggaactggtaatcaatgtgtaaagtgtctccaagca 16630876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 295 - 374
Target Start/End: Original strand, 5147503 - 5147582
Alignment:
Q  295 aaaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||| ||| |||||    
T  5147503 aaaaatcacaccaatgaataacaatgatgtgtggagcaaaggaagtggtaatcaatgtgtaaagtgtctccaagaaacaa 5147582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 279 - 347
Target Start/End: Complemental strand, 8689765 - 8689697
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatc 347  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||||    
T  8689765 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagtaaaggaagtggtaatc 8689697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 278 - 374
Target Start/End: Complemental strand, 25862309 - 25862214
Alignment:
Q  278 gtgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    ||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||   ||||||||||| |||||||||    
T  25862309 gtgttgtgaattc-ggacaaaatcacaccaatgaataacaaagatgtgtggagcaaaggaagtggtaatcaatagataaagtgtctccaagcaacaa 25862214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 295 - 374
Target Start/End: Original strand, 5143085 - 5143164
Alignment:
Q  295 aaaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||| ||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||| || ||||||    
T  5143085 aaaaatcaaaccaatgaataacaatgatgtgtggagcaaaggaagtggtaatcaatgtgtaaagtgtctccaaacaacaa 5143164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 276 - 371
Target Start/End: Original strand, 10047187 - 10047281
Alignment:
Q  276 ttgtgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaa 371  Q
    ||||||||||||||| ||  |||||||||||||||||||||||| |||||||||||||| |||| |||||||||||  ||||||||||| ||||||    
T  10047187 ttgtgttgtgaattc-ggacaaaatcacaccaatgaataacaaaaatgtgtggagcaaaggaagtggtaatcaatggataaagtgtctccaagcaa 10047281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 296 - 374
Target Start/End: Original strand, 54867009 - 54867087
Alignment:
Q  296 aaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||   ||||||||||| |||||||||    
T  54867009 aaaatcacaccaatgaataacaaagatgtgtggagcaaaggaagtggtaatcaatagataaagtgtctccaagcaacaa 54867087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 279 - 374
Target Start/End: Complemental strand, 5269481 - 5269386
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||| |  |||||| |||| ||| |||||||||||||||||||||||| |||| |||||||||||  ||||||||||| |||||||||    
T  5269481 tgttgtgaattcggacaaaaattacactaataaataacaaagatgtgtggagcaaaggaagtggtaatcaatggataaagtgtctccaagcaacaa 5269386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 279 - 329
Target Start/End: Complemental strand, 5397119 - 5397069
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtgga 329  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5397119 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtgga 5397069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 314 - 374
Target Start/End: Complemental strand, 5396926 - 5396866
Alignment:
Q  314 aacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||    
T  5396926 aacaaagatgtgtggagcaaaggaagtggtaatcaatgtgtaaagtgtctccaagcaacaa 5396866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 279 - 374
Target Start/End: Complemental strand, 28468813 - 28468718
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatg-aagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||| | ||||| ||||||||||| | ||||||||||||||||||||| | ||| ||||||| |||||||||||||||| |||||||||    
T  28468813 tgttgtgaattcggataaaactcacaccaatgta-aacaaagatgtgtggagcaaaaggaagtggtaatctatgtgtaaagtgtctccaagcaacaa 28468718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 296 - 374
Target Start/End: Original strand, 39245820 - 39245898
Alignment:
Q  296 aaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||   ||||||||||| || ||||||    
T  39245820 aaaatcacaccaatgaataataaagatgtgtggagcgaatgaagtggtaatcaatagataaagtgtctccaaacaacaa 39245898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 296 - 374
Target Start/End: Complemental strand, 3796792 - 3796713
Alignment:
Q  296 aaaatcacaccaatgaataacaaagatgtgtggagc-aaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||||||||||||||||||||||||||| ||| |||| | ||||||||   ||||||||||| |||||||||    
T  3796792 aaaatcacaccaatgaataacaaagatgtgtggagcaaaaggaagtgataatcaatagataaagtgtctccaagcaacaa 3796713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 296 - 374
Target Start/End: Original strand, 24333637 - 24333716
Alignment:
Q  296 aaaatcacaccaatgaataacaaagatgtgtggagc-aaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||   ||||||||||| || ||||||    
T  24333637 aaaatcacaccaatgaataacaaagatgtgtggagcaaaaggaagtggtaatcaatagataaagtgtctccaaacaacaa 24333716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 279 - 374
Target Start/End: Complemental strand, 31985919 - 31985824
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatg-aagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||| |  |||| ||||||||||| | ||||||||||||||| ||||| | ||| ||||||| |||||||||||||||| |||||||||    
T  31985919 tgttgtgaattcggacaaaactcacaccaatgta-aacaaagatgtgtggtgcaaaaggaagtggtaatctatgtgtaaagtgtctccaagcaacaa 31985824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 279 - 351
Target Start/End: Complemental strand, 34496108 - 34496038
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatg 351  Q
    |||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||| | || |||||||||||    
T  34496108 tgttgtgaattc-ggtcaaaatcacaccaatgaa-aacaaagatgtgtggagcaaaggtagcggtaatcaatg 34496038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 279 - 374
Target Start/End: Complemental strand, 42599863 - 42599769
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||| ||  |||||||||| ||||||||| ||||||||||| |||||| |||| ||||||||||   ||||||| ||| |||||||||    
T  42599863 tgttgtgaattc-ggacaaaatcacactaatgaataataaagatgtgtgaagcaaaggaagtggtaatcaatagataaagtgactccaagcaacaa 42599769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 279 - 374
Target Start/End: Complemental strand, 6743706 - 6743612
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||| ||  ||||||| | |||||||||||||||| |||| ||||||| |||| ||||||||||   ||||||||||| || ||||||    
T  6743706 tgttgtgaattc-ggacaaaatcatagcaatgaataacaaagaagtgtcgagcaaaggaagtggtaatcaatagataaagtgtctccaaacaacaa 6743612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 279 - 357
Target Start/End: Original strand, 5112052 - 5112128
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaa 357  Q
    |||||||||||| | ||||| ||||||||||||| |||||| |||||||||||||| | || ||||||||||| |||||    
T  5112052 tgttgtgaattcggataaaa-tcacaccaatgaa-aacaaaaatgtgtggagcaaagggagtggtaatcaatgagtaaa 5112128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 333
Target Start/End: Original strand, 29760447 - 29760503
Alignment:
Q  277 tgtgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaa 333  Q
    |||||||||||| | | | ||| ||||||||||||| ||||||||||||||||||||    
T  29760447 tgtgttgtgaatccggttgaaactcacaccaatgaaaaacaaagatgtgtggagcaa 29760503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 336 - 374
Target Start/End: Original strand, 3777417 - 3777455
Alignment:
Q  336 gaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||| |||||||||||||||||||||||| |||||||||    
T  3777417 gaagtggtaatcaatgtgtaaagtgtctccaagcaacaa 3777455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 360
Target Start/End: Complemental strand, 1983568 - 1983505
Alignment:
Q  296 aaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtg 360  Q
    |||||||||| |||||| ||||||||||||||||||||| ||||   |||||||||  |||||||    
T  1983568 aaaatcacacaaatgaa-aacaaagatgtgtggagcaaaggaagtaataatcaatggataaagtg 1983505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 72; Significance: 1e-32; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 279 - 374
Target Start/End: Complemental strand, 37119 - 37024
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||    
T  37119 tgttgtgaattccggtgaaaatcacaccgatgaaaaacaaagatgtgtggagcaaaggaagtggtaatcaatgtgtaaagtgtctccaagcaacaa 37024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 298 - 374
Target Start/End: Complemental strand, 44227 - 44151
Alignment:
Q  298 aatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    ||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||    
T  44227 aatcacaccaatgaaaaacaaagatgtgtggagcaaaggaagtggtaatcaatgtgtaaagtgtctccaagcaacaa 44151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 1e-32; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 279 - 374
Target Start/End: Original strand, 4455838 - 4455933
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||||  ||||||||||||||||||||| ||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||    
T  4455838 tgttgtgaattcccttaaaaatcacaccaatgaatatcaaagatgtgtggagcaaaggaagtggtaatcaatgtgtaaagtgtctccaagcaacaa 4455933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 279 - 374
Target Start/End: Complemental strand, 19176044 - 19175945
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatc----aatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||    ||||||||||||||||| |||||||||    
T  19176044 tgttgtgaattctggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaaggaagtggtaatcaattaatgtgtaaagtgtctccaagcaacaa 19175945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 281 - 374
Target Start/End: Complemental strand, 5702768 - 5702675
Alignment:
Q  281 ttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||  ||||||||    
T  5702768 ttgtgaattctggacaaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagtggtaatcaatgaataaagtgtctcctagcaacaa 5702675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 298 - 371
Target Start/End: Original strand, 7412166 - 7412239
Alignment:
Q  298 aatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaa 371  Q
    ||||||||||||||| ||||||||||||||||||||| |||| |||||| ||||||||||||||||| ||||||    
T  7412166 aatcacaccaatgaaaaacaaagatgtgtggagcaaaggaagtggtaatgaatgtgtaaagtgtctccaagcaa 7412239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 296 - 374
Target Start/End: Complemental strand, 9766090 - 9766012
Alignment:
Q  296 aaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    ||||||||||||||||||||||||||||||||||||||| |||| | ||||||||   ||||||||||| |||||||||    
T  9766090 aaaatcacaccaatgaataacaaagatgtgtggagcaaaggaagtgataatcaatagataaagtgtctccaagcaacaa 9766012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 279 - 374
Target Start/End: Complemental strand, 19752681 - 19752585
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatg-aataacaaagatgtgtggagc-aaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||| ||||||||||||||||||||| || |||||||||||||||||| ||| |||| |||||||||| | ||||||||||| |||||||||    
T  19752681 tgttgtgaat-ccggtaaaaatcacaccaatgaaaaaacaaagatgtgtggagcaaaaggaagtggtaatcaatatataaagtgtctccaagcaacaa 19752585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 279 - 374
Target Start/End: Original strand, 26287713 - 26287808
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatg-aagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||| | ||||| ||||||||||| | ||||||||||||||||||||| | ||| ||||||| |||||||||||||||| |||||||||    
T  26287713 tgttgtgaattcggataaaactcacaccaatgta-aacaaagatgtgtggagcaaaaggaagtggtaatctatgtgtaaagtgtctccaagcaacaa 26287808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 279 - 374
Target Start/End: Original strand, 26312964 - 26313059
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatg-aagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||| | ||||| ||||||||||| | ||||||||||||||||||||| | ||| ||||||| |||||||||||||||| |||||||||    
T  26312964 tgttgtgaattcggataaaactcacaccaatgta-aacaaagatgtgtggagcaaaaggaagtggtaatctatgtgtaaagtgtctccaagcaacaa 26313059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 279 - 374
Target Start/End: Complemental strand, 31071516 - 31071420
Alignment:
Q  279 tgttgtgaattccggtaaaaa-tcacaccaatgaataacaaagatgtgtggagcaaatg-aagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||| | |||||| ||||||||||| | ||||||||||||||||||||| | ||| ||||||| |||||||||||||||| |||||||||    
T  31071516 tgttgtgaattcggataaaaactcacaccaatgta-aacaaagatgtgtggagcaaaaggaagtggtaatctatgtgtaaagtgtctccaagcaacaa 31071420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 296 - 374
Target Start/End: Original strand, 6127045 - 6127124
Alignment:
Q  296 aaaatcacaccaatgaataacaaagatgtgtggagc-aaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||   | ||||||||| |||||||||    
T  6127045 aaaatcacaccaatgaataacaaagatgtgtggagcaaaaggaagtggtaatcaatagattaagtgtctccaagcaacaa 6127124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 296 - 350
Target Start/End: Complemental strand, 4696873 - 4696819
Alignment:
Q  296 aaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaat 350  Q
    ||||||||| |||||||||||||||||||||||| |||| |||| ||||||||||    
T  4696873 aaaatcacatcaatgaataacaaagatgtgtggaacaaaggaagtggtaatcaat 4696819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 279 - 374
Target Start/End: Complemental strand, 1262238 - 1262143
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatga-agaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||| | | ||||| ||||||||||||| ||||||||||||||||| ||| |  || ||||||| ||| |||||||||||| |||||||||    
T  1262238 tgttgtgaatccggttaaaactcacaccaatgaa-aacaaagatgtgtggagtaaaagggagtggtaatctatgagtaaagtgtctccaagcaacaa 1262143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 279 - 362
Target Start/End: Original strand, 26300958 - 26301041
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagc-aaatgaagaggtaatcaatgtgtaaagtgtc 362  Q
    |||||||||||| | ||||| ||||||||||| | |||||||||| ||||||| ||| |||| ||||||| ||||||||||||||    
T  26300958 tgttgtgaattcggataaaactcacaccaatgta-aacaaagatgcgtggagcaaaaggaagtggtaatctatgtgtaaagtgtc 26301041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 296 - 371
Target Start/End: Complemental strand, 26403501 - 26403425
Alignment:
Q  296 aaaatcacaccaatgaataacaaagatgtgtggagc-aaatgaagaggtaatcaatgtgtaaagtgtctctaagcaa 371  Q
    |||| ||||||||||||||||||||||||||||||| ||| |||| ||||||||||   ||| ||||||| ||||||    
T  26403501 aaaaccacaccaatgaataacaaagatgtgtggagcaaaaggaagtggtaatcaatagataatgtgtctccaagcaa 26403425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 335
Target Start/End: Original strand, 28307368 - 28307422
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaat 335  Q
    |||||||||||| | ||||| ||||||||||||| ||||||||||||||||||||||    
T  28307368 tgttgtgaattcggataaaa-tcacaccaatgaa-aacaaagatgtgtggagcaaat 28307422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 278 - 333
Target Start/End: Original strand, 36979183 - 36979238
Alignment:
Q  278 gtgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaa 333  Q
    ||||||||||| | | | ||| ||||||||||||| ||||||||||||||||||||    
T  36979183 gtgttgtgaatccggttgaaactcacaccaatgaaaaacaaagatgtgtggagcaa 36979238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 359
Target Start/End: Complemental strand, 7493352 - 7493275
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagt 359  Q
    |||||||||||| ||  |||||||||||||| ||  || | ||||||||||||||| ||||  ||||||||||||||||||    
T  7493352 tgttgtgaattc-ggacaaaatcacaccaataaa--actatgatgtgtggagcaaaggaagtagtaatcaatgtgtaaagt 7493275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 333
Target Start/End: Complemental strand, 10689412 - 10689379
Alignment:
Q  300 tcacaccaatgaataacaaagatgtgtggagcaa 333  Q
    ||||||||||||| ||||||||||||||||||||    
T  10689412 tcacaccaatgaaaaacaaagatgtgtggagcaa 10689379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 351
Target Start/End: Original strand, 6813489 - 6813559
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatg 351  Q
    |||||||||||| ||  ||||||||||||||||| ||||||||||||| |||||||   || |||||||||||    
T  6813489 tgttgtgaattc-ggacaaaatcacaccaatgaa-aacaaagatgtgttgagcaaagtgagtggtaatcaatg 6813559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 72; Significance: 1e-32; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 279 - 374
Target Start/End: Complemental strand, 5017759 - 5017664
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| |||||||||||  ||||||||||| |||||||||    
T  5017759 tgttgtgaattccggtaaaaatcacactaatgaataacaaagatgtgtggagcaaaggaagtggtaatcaatggataaagtgtctccaagcaacaa 5017664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 279 - 374
Target Start/End: Original strand, 31936398 - 31936493
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagc-aaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||| ||||| ||||||||||||||||| |||||||||||||||||| ||| |||| |||||||||||||||||||||||| |||||||||    
T  31936398 tgttgtgaat-ccggttaaaatcacaccaatgaaaaacaaagatgtgtggagcaaaaggaagtggtaatcaatgtgtaaagtgtctccaagcaacaa 31936493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 5572886 - 5572788
Alignment:
Q  275 tttgtgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||   ||||||||||| |||||||||    
T  5572886 tttgtgttgtgaattc-ggacaaaatcacaccaatgaataacaaagatgtgtggagcaaaggaagtggtaatcaatagataaagtgtctccaagcaacaa 5572788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 298 - 374
Target Start/End: Complemental strand, 5757744 - 5757668
Alignment:
Q  298 aatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    ||||||||||||||| |||||||| |||||||||||| |||| |||||||||||||||||||||||| |||||||||    
T  5757744 aatcacaccaatgaaaaacaaagaagtgtggagcaaaggaagtggtaatcaatgtgtaaagtgtctccaagcaacaa 5757668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 298 - 374
Target Start/End: Original strand, 21355867 - 21355943
Alignment:
Q  298 aatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    ||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||||||||||  |||||||||    
T  21355867 aatcacaccaatgaaaaacaaagatgtgtggagcaaaggaagtggtaatcaatgtgtaaagtgtcttcaagcaacaa 21355943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 277 - 371
Target Start/End: Complemental strand, 31086751 - 31086657
Alignment:
Q  277 tgtgttgtgaattccggta-aaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaa 371  Q
    |||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||  ||||||||||| ||||||    
T  31086751 tgtgttgtgaattc-ggtacaaaatcacaccaatgaagaacaaagatgtgtggagcaaaggaagtggtaatcaatggataaagtgtctccaagcaa 31086657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 279 - 374
Target Start/End: Original strand, 18232655 - 18232750
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||| |   |||||||||||||||||||||||||||||||| |||||| |||| ||||||||||   ||||||||||| |||||||||    
T  18232655 tgttgtgaattcggaacaaaatcacaccaatgaataacaaagatgtgtgaagcaaaggaagtggtaatcaatagataaagtgtctccaagcaacaa 18232750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 279 - 374
Target Start/End: Complemental strand, 10077451 - 10077357
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||| ||  |||||||||| |||||||| | ||||||||||||||||| |||| ||||||||||   ||||||||||| |||||||||    
T  10077451 tgttgtgaattc-ggacaaaatcacactaatgaatagcgaagatgtgtggagcaaaggaagtggtaatcaatagataaagtgtctccaagcaacaa 10077357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 296 - 374
Target Start/End: Complemental strand, 21801618 - 21801542
Alignment:
Q  296 aaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||||||||||||||||||||||||||  || |||| ||||||||||   ||||||||||| |||||||||    
T  21801618 aaaatcacaccaatgaataacaaagatgtgtggag--aaggaagtggtaatcaatagataaagtgtctccaagcaacaa 21801542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 279 - 374
Target Start/End: Original strand, 31979324 - 31979418
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||| ||  |||||||||||| | |||||||||||||||||||||||| |||| ||||||||||   ||||||||||  |||||||||    
T  31979324 tgttgtgaattc-ggacaaaatcacaccactaaataacaaagatgtgtggagcaaaggaagtggtaatcaatagataaagtgtcttcaagcaacaa 31979418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 279 - 374
Target Start/End: Complemental strand, 26258286 - 26258191
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatg-aagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||| ||||||| | ||||| ||||||||||| | ||||||||||| ||||||||| | ||| ||||| |||||||||||||||||| |||||||||    
T  26258286 tgttctgaattcggataaaactcacaccaatgta-aacaaagatgtatggagcaaaaggaagtggtaaccaatgtgtaaagtgtctccaagcaacaa 26258191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 278 - 363
Target Start/End: Complemental strand, 24436253 - 24436169
Alignment:
Q  278 gtgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtct 363  Q
    ||||||||||||| ||  ||||| ||||||||||||||||||||||||||||| ||  |||  ||||||||||   ||||||||||    
T  24436253 gtgttgtgaattc-ggacaaaataacaccaatgaataacaaagatgtgtggagtaagggaaatggtaatcaatagataaagtgtct 24436169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 296 - 350
Target Start/End: Original strand, 4629788 - 4629843
Alignment:
Q  296 aaaatcacaccaatgaataacaaagatgtgtggag-caaatgaagaggtaatcaat 350  Q
    |||||||||||||||||||| ||||||||||||||  ||| |||| ||||||||||    
T  4629788 aaaatcacaccaatgaataataaagatgtgtggagtaaaaggaagtggtaatcaat 4629843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 279 - 334
Target Start/End: Complemental strand, 5675057 - 5675003
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaa 334  Q
    |||||||||| | | ||||| ||||||||||||| |||||||||||||||||||||    
T  5675057 tgttgtgaatccggttaaaactcacaccaatgaa-aacaaagatgtgtggagcaaa 5675003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 333
Target Start/End: Complemental strand, 30126084 - 30126031
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaa 333  Q
    |||||||||| | | | ||||||||||||||||| ||||||||||||||||||||    
T  30126084 tgttgtgaatccggttgaaaatcacaccaatgaa-aacaaagatgtgtggagcaa 30126031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 374
Target Start/End: Original strand, 22708829 - 22708924
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatga-agaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||| | | ||||| ||||||||||  | ||||||||||||| | ||||| |  || ||||||| |||||||||||||||| |||||||||    
T  22708829 tgttgtgaatccggataaaactcacaccaatata-aacaaagatgtgtagtgcaaaggggagtggtaatctatgtgtaaagtgtctccaagcaacaa 22708924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 351
Target Start/End: Original strand, 27165531 - 27165584
Alignment:
Q  296 aaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatg 351  Q
    ||||| ||||||||  ||||||||||||||||||||||| ||||  ||||||||||    
T  27165531 aaaattacaccaat--ataacaaagatgtgtggagcaaaggaagtcgtaatcaatg 27165584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 72; Significance: 1e-32; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 279 - 374
Target Start/End: Complemental strand, 21536856 - 21536761
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||||||||||| || ||||||    
T  21536856 tgttttgaattccggtaaaaatcacaccaatgaaaaacaaagatgtgtggagcaaaggaagtggtaatcaatgtgtaaagtgtctccaatcaacaa 21536761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 297 - 374
Target Start/End: Complemental strand, 26645166 - 26645089
Alignment:
Q  297 aaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  26645166 aaatcacaccaatgaataacaaagatgtgtggagcaaatgaagtggtaatcaatgtgtaaagtgtctttaagcaacaa 26645089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 278 - 374
Target Start/End: Original strand, 3281519 - 3281613
Alignment:
Q  278 gtgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    ||||||||||||||| ||||||||||||||||||||||||||||  ||||||| ||| |||| |||||||||||||||||||||||| |||||||||    
T  3281519 gtgttgtgaattccgttaaaaatcacaccaatgaataacaaaga--tgtggagtaaaggaagtggtaatcaatgtgtaaagtgtctccaagcaacaa 3281613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 298 - 375
Target Start/End: Original strand, 37069597 - 37069674
Alignment:
Q  298 aatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaaa 375  Q
    ||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||    
T  37069597 aatcacaccaatgaaaaacaaagatgtgtggagcaaaggaagtggtaatcaatgtgtaaagtgtctccaagcaacaaa 37069674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 279 - 374
Target Start/End: Original strand, 29651620 - 29651715
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||| |  |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||  |||||||||| ||| ||||||    
T  29651620 tgttgtgaattcggacaaaaatcacaccaatgaataacaaagatgtgtggagcaaaggaagtggtaatcaatgaataaagtgtctataatcaacaa 29651715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 279 - 374
Target Start/End: Complemental strand, 40817020 - 40816925
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||| |  ||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||   ||||||||||| |||||||||    
T  40817020 tgttgtgaattcggacaaaaaacacaccaatgaataacaaagatgtgtggagcaaaggaagtggtaatcaatagataaagtgtctccaagcaacaa 40816925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 279 - 374
Target Start/End: Original strand, 775483 - 775577
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||| ||  ||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||   ||||||||||| |||||||||    
T  775483 tgttgtgaattc-ggacaaaatcacaccaatgaataacaaagatgtgtggagcaaaggaagtggtaaccaatagataaagtgtctccaagcaacaa 775577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 279 - 374
Target Start/End: Complemental strand, 47099111 - 47099015
Alignment:
Q  279 tgttgtgaattccggtaaaa-atcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||| |  |||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||   ||||||||||| ||| |||||    
T  47099111 tgttgtgaattctgacaaaatatcacaccaatgaataacaaagatgtgtggagcaaaggaagtggtaatcaatagataaagtgtctccaagtaacaa 47099015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 299 - 374
Target Start/End: Complemental strand, 47103107 - 47103032
Alignment:
Q  299 atcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    ||||||||||||||||| ||||| ||||||||||||||||| ||||||||||   ||||||||||| |||||||||    
T  47103107 atcacaccaatgaataataaagacgtgtggagcaaatgaagtggtaatcaatagataaagtgtctcaaagcaacaa 47103032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 296 - 374
Target Start/End: Complemental strand, 16124787 - 16124709
Alignment:
Q  296 aaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||||||||||||||||||||||| |||||| |||| |||||||||||  |||| ||| || |||||||||    
T  16124787 aaaatcacaccaatgaataacaaagatgtgtgaagcaaaggaagtggtaatcaatgaataaaatgtgtccaagcaacaa 16124709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 279 - 374
Target Start/End: Complemental strand, 19359132 - 19359037
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatg-aagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||| | | ||||| ||||||||||| | ||||||||||||||||||||| | ||| ||||||| |||||||||||||||| |||||||||    
T  19359132 tgttgtgaatccggttaaaactcacaccaatgta-aacaaagatgtgtggagcaaaaggaagtggtaatctatgtgtaaagtgtctccaagcaacaa 19359037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 296 - 374
Target Start/End: Complemental strand, 27104639 - 27104560
Alignment:
Q  296 aaaatcacaccaatgaataacaaagatgtgtggagc-aaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    ||||||||||||||||| |||||||||||||||||| ||| |||| ||||||||||   ||||||||||| |||||||||    
T  27104639 aaaatcacaccaatgaaaaacaaagatgtgtggagcaaaaggaagtggtaatcaatagataaagtgtctccaagcaacaa 27104560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 296 - 350
Target Start/End: Original strand, 13598223 - 13598277
Alignment:
Q  296 aaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaat 350  Q
    ||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||    
T  13598223 aaaatcacaccaatgaataacaaagatgtgtggagtaaaggaagtggtaatcaat 13598277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 296 - 374
Target Start/End: Original strand, 19072753 - 19072831
Alignment:
Q  296 aaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    ||||||||||||||||||||||||||| |||||| |||| ||||  |||||||||   ||||||||||| |||||||||    
T  19072753 aaaatcacaccaatgaataacaaagatatgtggaacaaaggaagtagtaatcaatagataaagtgtctcgaagcaacaa 19072831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 296 - 374
Target Start/End: Original strand, 19120643 - 19120721
Alignment:
Q  296 aaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    ||||||||||||||||||||||||||| |||||| |||| ||||  |||||||||   ||||||||||| |||||||||    
T  19120643 aaaatcacaccaatgaataacaaagatatgtggaacaaaggaagtagtaatcaatagataaagtgtctcgaagcaacaa 19120721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 294 - 374
Target Start/End: Complemental strand, 19361707 - 19361627
Alignment:
Q  294 taaaaatcacaccaatgaataacaaagatgtgtggagcaaatg-aagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    ||||| ||||||||||| | ||||||||||||||||||||| | ||| ||||||| |||||||||||||||| |||||||||    
T  19361707 taaaactcacaccaatgta-aacaaagatgtgtggagcaaaaggaagtggtaatctatgtgtaaagtgtctccaagcaacaa 19361627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 294 - 374
Target Start/End: Complemental strand, 19380347 - 19380267
Alignment:
Q  294 taaaaatcacaccaatgaataacaaagatgtgtggagcaaatg-aagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    ||||| ||||||||||| | ||||||||||||||||||||| | ||| ||||||| |||||||||||||||| |||||||||    
T  19380347 taaaactcacaccaatgta-aacaaagatgtgtggagcaaaaggaagtggtaatctatgtgtaaagtgtctccaagcaacaa 19380267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 279 - 371
Target Start/End: Complemental strand, 24203054 - 24202962
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatga-agaggtaatcaatgtgtaaagtgtctctaagcaa 371  Q
    |||||||||| | | ||||| ||||||||||||| ||||||||||||||||||||| |  || ||||||| |||||||||||||||| ||||||    
T  24203054 tgttgtgaatccggttaaaactcacaccaatgaa-aacaaagatgtgtggagcaaaagggagtggtaatctatgtgtaaagtgtctccaagcaa 24202962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 295 - 371
Target Start/End: Original strand, 32889265 - 32889341
Alignment:
Q  295 aaaaatcacaccaatgaataacaaagatgtgtggagcaaatgaa-gaggtaatcaatgtgtaaagtgtctctaagcaa 371  Q
    |||||||| ||||||||| ||||||||||||||||||||| ||| | | |||||||||||||||||||||| ||||||    
T  32889265 aaaaatcataccaatgaa-aacaaagatgtgtggagcaaaagaaagtgataatcaatgtgtaaagtgtctccaagcaa 32889341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 279 - 374
Target Start/End: Complemental strand, 13604909 - 13604815
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatg-aagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||| ||  ||||||||||||||| | ||||||||||||||||||||| | ||| | |||||||||||||||||||||| || ||||||    
T  13604909 tgttgtgaattc-ggacaaaatcacaccaatgta-aacaaagatgtgtggagcaaaaggaagtgataatcaatgtgtaaagtgtctccaaacaacaa 13604815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 296 - 374
Target Start/End: Original strand, 9476089 - 9476168
Alignment:
Q  296 aaaatcacaccaatgaataacaaagatgtgtggagc-aaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||||  ||||| ||||  ||||||||||| |||||||||    
T  9476089 aaaatcacaccaatgaaaaacaaagatgtgtagagcaaaatgaagtagtaattaatggataaagtgtctccaagcaacaa 9476168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 296 - 370
Target Start/End: Complemental strand, 47704208 - 47704133
Alignment:
Q  296 aaaatcacaccaatgaataacaaagatgtgtggagc-aaatgaagaggtaatcaatgtgtaaagtgtctctaagca 370  Q
    ||||||||| |||||||||||||||||||||||||| ||| |||| ||||||||||   ||||||||||| |||||    
T  47704208 aaaatcacatcaatgaataacaaagatgtgtggagcaaaaggaagtggtaatcaatagataaagtgtctccaagca 47704133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 296 - 351
Target Start/End: Complemental strand, 9024100 - 9024045
Alignment:
Q  296 aaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatg 351  Q
    ||||||||||||||||| |||||||| |||||||||| |  ||| |||||||||||    
T  9024100 aaaatcacaccaatgaaaaacaaagaagtgtggagcagagaaagtggtaatcaatg 9024045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 357
Target Start/End: Complemental strand, 50521389 - 50521312
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaa 357  Q
    |||||||||||| ||  ||||||||| |||| || || |||||||||||||| ||| |||| ||||||||||| |||||    
T  50521389 tgttgtgaattc-ggacaaaatcacatcaataaaaaataaagatgtgtggagtaaaggaagtggtaatcaatgagtaaa 50521312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 357
Target Start/End: Complemental strand, 17345782 - 17345728
Alignment:
Q  301 cacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaa 357  Q
    ||||||||||||  |||||||||||||||||||| ||||  |||||||||| |||||    
T  17345782 cacaccaatgaa--acaaagatgtgtggagcaaaggaagtagtaatcaatgagtaaa 17345728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 324
Target Start/End: Complemental strand, 47704266 - 47704222
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgt 324  Q
    |||||||||||| ||  |||||||||||||||||||||||||||||    
T  47704266 tgttgtgaattc-ggacaaaatcacaccaatgaataacaaagatgt 47704222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 374
Target Start/End: Original strand, 22819270 - 22819330
Alignment:
Q  314 aacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||||||||||||  ||  |||||||||||  |||||||||  ||||||||||    
T  22819270 aacaaagatgtgtggagcaaagaaaatggtaatcaatggataaagtgtccttaagcaacaa 22819330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1805 (Bit Score: 69; Significance: 7e-31; HSPs: 1)
Name: scaffold1805
Description:

Target: scaffold1805; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 279 - 374
Target Start/End: Original strand, 1217 - 1313
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataa-caaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||| ||||||||||||||||||||| || ||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||    
T  1217 tgttgtgaattctggtaaaaatcacaccaatgaaaaaacaaagatgtgtggagcaaaggaagtggtaatcaatgtgtaaagtgtctccaagcaacaa 1313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 1e-29; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 277 - 374
Target Start/End: Original strand, 2479146 - 2479244
Alignment:
Q  277 tgtgttgtgaattccggtaaa-aatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||| |||||||  | ||||||||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  2479146 tgtgttgtgagttccggttgataatcacaccaatgaaaaacaaagatgtgtggagcaaaggaagtggtaatcaatgtgtaaagtgtctctaagcaacaa 2479244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 279 - 374
Target Start/End: Complemental strand, 9190294 - 9190199
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagc-aaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||| ||| ||||||||||||||||| |||||||||||||||||| ||| |||| |||||||||||||||||||||||| |||||||||    
T  9190294 tgttgtgaattc-ggtcaaaatcacaccaatgaaaaacaaagatgtgtggagcaaaaggaagtggtaatcaatgtgtaaagtgtctccaagcaacaa 9190199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 296 - 374
Target Start/End: Original strand, 55766 - 55844
Alignment:
Q  296 aaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||||||||||||||||||||||| || ||| |||| |||||||||||||||||||||||| |||||||||    
T  55766 aaaatcacaccaatgaataacaaagatgtgtgaagtaaaggaagtggtaatcaatgtgtaaagtgtctccaagcaacaa 55844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 298 - 375
Target Start/End: Original strand, 47263509 - 47263586
Alignment:
Q  298 aatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaaa 375  Q
    ||||||||||||||| |||||||||| |||||||||| |||| |||||||||||||||||||||||| ||||||||||    
T  47263509 aatcacaccaatgaaaaacaaagatgcgtggagcaaaggaagtggtaatcaatgtgtaaagtgtctccaagcaacaaa 47263586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 279 - 374
Target Start/End: Complemental strand, 9185449 - 9185354
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagc-aaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||| ||| |||||||||| |||||| |||||||||||||||||| ||| |||| |||||||||||||||||||||||| |||||||||    
T  9185449 tgttgtgaattc-ggtcaaaatcacactaatgaaaaacaaagatgtgtggagcaaaaggaagtggtaatcaatgtgtaaagtgtctccaagcaacaa 9185354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 279 - 374
Target Start/End: Original strand, 49091472 - 49091567
Alignment:
Q  279 tgttgtgaattccggta-aaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||   ||||||||||| |||||||||    
T  49091472 tgttgtgaatt-cggtacaaaatcacaccaatgaataacaaagatgtgtggagcaaaggaagtggtaatcaatagataaagtgtctccaagcaacaa 49091567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 279 - 374
Target Start/End: Complemental strand, 9235843 - 9235749
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||| ||  |||||||||||||| |||||||||||||||||||||||| |||| |||||||||||  ||||||||||| |||||||||    
T  9235843 tgttgtgaattc-ggacaaaatcacaccaataaataacaaagatgtgtggagcaaaggaagtggtaatcaatggataaagtgtctccaagcaacaa 9235749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 295 - 374
Target Start/End: Original strand, 21983108 - 21983187
Alignment:
Q  295 aaaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||||||||| ||||| ||||| |||||||||||||| ||||||||||||||||||| |||| |||||||||    
T  21983108 aaaaatcacaccaatgaaaaacaatgatgtatggagcaaatgaagtggtaatcaatgtgtaaagtatctccaagcaacaa 21983187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 295 - 374
Target Start/End: Original strand, 21988732 - 21988811
Alignment:
Q  295 aaaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||||||||| || || ||||||||||||||| |||| |||||||||||||||||||||| | |||||||||    
T  21988732 aaaaatcacaccaatgaaaaataatgatgtgtggagcaaaggaagtggtaatcaatgtgtaaagtgtcaccaagcaacaa 21988811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 279 - 374
Target Start/End: Complemental strand, 46516597 - 46516503
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||| ||  ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||   ||||||||||| || ||||||    
T  46516597 tgttgtgaattc-ggacaaaatcacaccaatgaataacaaagatgtgtggagcaaaggaagtggtaatcaatagataaagtgtctccaaacaacaa 46516503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 296 - 374
Target Start/End: Complemental strand, 4796940 - 4796862
Alignment:
Q  296 aaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||   |||||| |||| |||||||||    
T  4796940 aaaatcacaccaatgaataacaaagatgtgtggagcaaaggaagtggtaatcaatagataaagtttctccaagcaacaa 4796862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 279 - 374
Target Start/End: Original strand, 20283900 - 20283994
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||| ||  ||||||||||| ||||||||||||||||||||||||||| |||| | |||||||||  ||||||||||| ||| |||||    
T  20283900 tgttgtgaattc-ggacaaaatcacacctatgaataacaaagatgtgtggagcaaaagaagtgataatcaatggataaagtgtctccaagaaacaa 20283994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 279 - 374
Target Start/End: Complemental strand, 23403299 - 23403205
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||| ||  ||||||| ||||||||||||||||||||||||||||||| |||| | |||||||||  |||||||| || |||||||||    
T  23403299 tgttgtgaattc-ggacaaaatcataccaatgaataacaaagatgtgtggagcaaaggaagtgataatcaatggataaagtgtttccaagcaacaa 23403205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 296 - 374
Target Start/End: Original strand, 29159629 - 29159708
Alignment:
Q  296 aaaatcacaccaatgaataacaaagatgtgtggagcaaa-tgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||||||||||||||||||||||||||||||  |||| ||||||||||   ||||||||||| |||||||||    
T  29159629 aaaatcacaccaatgaataacaaagatgtgtggagcaaagggaagtggtaatcaatagataaagtgtctccaagcaacaa 29159708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 295 - 374
Target Start/End: Original strand, 35960640 - 35960719
Alignment:
Q  295 aaaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||||||||| ||||||||||||||||||||| |||| ||||||||||   |||||||| || |||||||||    
T  35960640 aaaaatcacaccaatgaaaaacaaagatgtgtggagcaaaggaagtggtaatcaatagataaagtgtttccaagcaacaa 35960719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 279 - 374
Target Start/End: Original strand, 2580199 - 2580293
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatg-aagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||| ||  ||||||||||||||| | ||||||||||||||||||||| | ||| |||||||||||||||||||||||  |||||||||    
T  2580199 tgttgtgaattc-ggacaaaatcacaccaatgta-aacaaagatgtgtggagcaaaaggaagtggtaatcaatgtgtaaagtgtcttcaagcaacaa 2580293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 279 - 374
Target Start/End: Original strand, 18408576 - 18408671
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatg-aagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||| | ||||| ||||||||||| | ||||||||||||||||||||| | ||| ||||||| |||||||||||||||| | |||||||    
T  18408576 tgttgtgaattcggataaaactcacaccaatgta-aacaaagatgtgtggagcaaaaggaagtggtaatctatgtgtaaagtgtctccacgcaacaa 18408671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 279 - 374
Target Start/End: Original strand, 18413453 - 18413548
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatg-aagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||| | ||||| ||||||||||| | |||||||||||| |||||||| | ||| ||||||| |||||||||||||||| |||||||||    
T  18413453 tgttgtgaattcggataaaactcacaccaatgta-aacaaagatgtgaggagcaaaaggaagtggtaatctatgtgtaaagtgtctccaagcaacaa 18413548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 298 - 374
Target Start/End: Complemental strand, 44848953 - 44848877
Alignment:
Q  298 aatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    ||||||||||||||| ||||| ||||||||||||||| | || | ||||||||||| |||||||||| |||||||||    
T  44848953 aatcacaccaatgaaaaacaaggatgtgtggagcaaaggtagtgctaatcaatgtgcaaagtgtctccaagcaacaa 44848877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 279 - 362
Target Start/End: Original strand, 3047063 - 3047144
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtc 362  Q
    |||||||||||| ||  ||||||||||||||||| |||||||||||||||||||||  ||| | ||||||||| ||||||||||    
T  3047063 tgttgtgaattc-ggacaaaatcacaccaatgaa-aacaaagatgtgtggagcaaagaaagtgataatcaatgagtaaagtgtc 3047144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 296 - 350
Target Start/End: Complemental strand, 33332720 - 33332666
Alignment:
Q  296 aaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaat 350  Q
    ||||||||||||||||||||| |||||||||||| |||| |||| ||||||||||    
T  33332720 aaaatcacaccaatgaataaccaagatgtgtggaccaaaggaagtggtaatcaat 33332666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 279 - 374
Target Start/End: Original strand, 21645818 - 21645913
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatga-agaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||| | | ||||| ||||||||||| | ||||||||||||||||||||| |  || ||||||| ||| |||||||||||| |||||||||    
T  21645818 tgttgtgaatccggttaaaactcacaccaatgta-aacaaagatgtgtggagcaaaagggagtggtaatctatgagtaaagtgtctccaagcaacaa 21645913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 296 - 331
Target Start/End: Complemental strand, 2647997 - 2647962
Alignment:
Q  296 aaaatcacaccaatgaataacaaagatgtgtggagc 331  Q
    ||||||||||||||||||||||||||||||||||||    
T  2647997 aaaatcacaccaatgaataacaaagatgtgtggagc 2647962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 314 - 359
Target Start/End: Complemental strand, 28617480 - 28617435
Alignment:
Q  314 aacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagt 359  Q
    ||||||||||||||||||||| |||| ||||||||||| |||||||    
T  28617480 aacaaagatgtgtggagcaaaggaagtggtaatcaatgagtaaagt 28617435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 279 - 334
Target Start/End: Complemental strand, 1533730 - 1533676
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaa 334  Q
    |||||||||| | | ||||| ||||||||||||| |||||||||||||||||||||    
T  1533730 tgttgtgaatccggttaaaactcacaccaatgaa-aacaaagatgtgtggagcaaa 1533676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 276 - 374
Target Start/End: Original strand, 21639617 - 21639715
Alignment:
Q  276 ttgtgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatga-agaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    ||||||||||||| |   ||||| ||||| ||||| | ||||||||||||||||||||| |  || ||||||| ||| |||||||||||| |||||||||    
T  21639617 ttgtgttgtgaatccgattaaaactcacatcaatgta-aacaaagatgtgtggagcaaaagggagtggtaatctatgagtaaagtgtctccaagcaacaa 21639715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 333
Target Start/End: Original strand, 2057765 - 2057819
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaa 333  Q
    |||||||||| | | | ||| ||||||||||||| ||||||||||||||||||||    
T  2057765 tgttgtgaatccggttgaaactcacaccaatgaaaaacaaagatgtgtggagcaa 2057819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 20357839 - 20357784
Alignment:
Q  277 tgtgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaa 333  Q
    |||||||||||| | | | ||| ||||||||||||| ||||||||||||||||||||    
T  20357839 tgtgttgtgaatccggttgaaactcacaccaatgaa-aacaaagatgtgtggagcaa 20357784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 298 - 374
Target Start/End: Original strand, 45085 - 45160
Alignment:
Q  298 aatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  45085 aatcacaccaattaa-aacaaagatgtgtggagcaaatgaagtggtaatcaatgtgtaaagtgtctccaagcaacaa 45160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 46; Significance: 4e-17; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 278 - 374
Target Start/End: Complemental strand, 24332 - 24236
Alignment:
Q  278 gtgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatg-aagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    ||||||||||| | | ||||| ||||||||||| | ||||||||||||||||||||| | ||| ||||||| |||||||||||||||| |||||||||    
T  24332 gtgttgtgaatccggttaaaactcacaccaatgta-aacaaagatgtgtggagcaaaaggaagtggtaatctatgtgtaaagtgtctccaagcaacaa 24236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 279 - 374
Target Start/End: Complemental strand, 18238 - 18143
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatg-aagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||| | | ||||| ||| ||||||| | ||||||||||||||||||||| | ||| ||||||| |||||||||||||||| |||||||||    
T  18238 tgttgtgaatccggttaaaactcaaaccaatgta-aacaaagatgtgtggagcaaaaggaagtggtaatctatgtgtaaagtgtctccaagcaacaa 18143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 279 - 359
Target Start/End: Complemental strand, 29777 - 29697
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagt 359  Q
    |||||||||||| |  |||||||||||||||||| |||||| ||||||| |||||| |||| ||||||||||| |||||||    
T  29777 tgttgtgaattcggtcaaaaatcacaccaatgaaaaacaaaaatgtgtgaagcaaaggaagtggtaatcaatgagtaaagt 29697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 279 - 359
Target Start/End: Original strand, 43067 - 43147
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagt 359  Q
    |||||||||||| |  |||||||||||||||||| |||||| ||||||| |||||| |||| ||||||||||| |||||||    
T  43067 tgttgtgaattcggtcaaaaatcacaccaatgaaaaacaaaaatgtgtgaagcaaaggaagtggtaatcaatgagtaaagt 43147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 357
Target Start/End: Original strand, 23356 - 23418
Alignment:
Q  295 aaaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaa 357  Q
    ||||||||||||||| || |  |||||||||| ||||||| |||| ||||||||||| |||||    
T  23356 aaaaatcacaccaataaaaagtaaagatgtgttgagcaaaggaagtggtaatcaatgagtaaa 23418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 296 - 350
Target Start/End: Original strand, 5508 - 5562
Alignment:
Q  296 aaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaat 350  Q
    ||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||    
T  5508 aaaatcacaccaatgaataacaaagatgtgtggagtaaaggaagtggtaatcaat 5562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 279 - 374
Target Start/End: Complemental strand, 133566 - 133472
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatg-aagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    |||||||||||| ||  ||||||||||||||| | ||||||||||||||||||||| | ||| | |||||||||||||||||||||| || ||||||    
T  133566 tgttgtgaattc-ggacaaaatcacaccaatgta-aacaaagatgtgtggagcaaaaggaagtgataatcaatgtgtaaagtgtctccaaacaacaa 133472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 296 - 374
Target Start/End: Original strand, 2319 - 2397
Alignment:
Q  296 aaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaatgtgtaaagtgtctctaagcaacaa 374  Q
    ||||||||||| | ||||||||||||||||||||||||| |||| | | ||||||   ||||||||||| |||||||||    
T  2319 aaaatcacaccgaagaataacaaagatgtgtggagcaaaggaagtgttgatcaatagataaagtgtctccaagcaacaa 2397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 279 - 350
Target Start/End: Original strand, 17077 - 17147
Alignment:
Q  279 tgttgtgaattccggtaaaaatcacaccaatgaataacaaagatgtgtggagcaaatgaagaggtaatcaat 350  Q
    |||||||||||| ||  |||||||||  |||||||||||||||||||||||||||| |||| ||||||||||    
T  17077 tgttgtgaattc-ggacaaaatcacatgaatgaataacaaagatgtgtggagcaaaggaagtggtaatcaat 17147  T

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Target: scaffold0148 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 296 - 334
Target Start/End: Original strand, 10554 - 10592
Alignment:
Q  296 aaaatcacaccaatgaataacaaagatgtgtggagcaaa 334  Q
    |||||||||||||||||||||||||||||||||||||||    
T  10554 aaaatcacaccaatgaataacaaagatgtgtggagcaaa 10592  T

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Target: scaffold0140 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 316 - 371
Target Start/End: Complemental strand, 8670 - 8614
Alignment:
Q  316 caaagatgtgtggagcaaatg-aagaggtaatcaatgtgtaaagtgtctctaagcaa 371  Q
    ||||||||||||||||||| | ||| |||||||||||||||||||||||| ||||||    
T  8670 caaagatgtgtggagcaaaaggaagtggtaatcaatgtgtaaagtgtctccaagcaa 8614  T

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