View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16849_low_5 (Length: 233)

Name: NF16849_low_5
Description: NF16849
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16849_low_5
NF16849_low_5
[»] chr5 (30 HSPs)
chr5 (10-226)||(19075846-19076062)
chr5 (10-226)||(31253116-31253332)
chr5 (1-161)||(33473828-33473988)
chr5 (9-161)||(36459570-36459722)
chr5 (109-212)||(43243764-43243867)
chr5 (155-226)||(36459412-36459483)
chr5 (10-68)||(43243711-43243769)
chr5 (104-161)||(15238117-15238174)
chr5 (104-161)||(22120591-22120648)
chr5 (114-161)||(19510484-19510531)
chr5 (114-161)||(28372091-28372138)
chr5 (114-161)||(37600018-37600065)
chr5 (104-161)||(10751839-10751896)
chr5 (114-161)||(22339034-22339081)
chr5 (114-161)||(22749183-22749230)
chr5 (114-161)||(38146428-38146475)
chr5 (114-161)||(41878661-41878708)
chr5 (104-161)||(18354819-18354876)
chr5 (104-161)||(20912252-20912309)
chr5 (104-145)||(22108449-22108490)
chr5 (114-161)||(22335504-22335551)
chr5 (114-161)||(23113412-23113459)
chr5 (104-157)||(19474172-19474225)
chr5 (104-157)||(20294540-20294593)
chr5 (104-161)||(24768562-24768619)
chr5 (109-145)||(9774978-9775014)
chr5 (7-35)||(33473630-33473658)
chr5 (7-35)||(33473697-33473725)
chr5 (7-35)||(33473764-33473792)
chr5 (9-37)||(36459796-36459824)
[»] chr3 (63 HSPs)
chr3 (10-226)||(45220868-45221084)
chr3 (10-226)||(5841123-5841339)
chr3 (14-226)||(2249126-2249338)
chr3 (1-161)||(41156-41316)
chr3 (1-161)||(16325938-16326098)
chr3 (9-161)||(16840108-16840260)
chr3 (109-212)||(14648275-14648378)
chr3 (29-161)||(11912449-11912581)
chr3 (79-161)||(10834915-10834998)
chr3 (155-226)||(11912291-11912362)
chr3 (155-226)||(51608665-51608736)
chr3 (10-68)||(14648222-14648280)
chr3 (7-112)||(13435924-13436029)
chr3 (8-112)||(8928736-8928840)
chr3 (152-207)||(16840344-16840399)
chr3 (104-161)||(12853363-12853420)
chr3 (104-161)||(14670048-14670105)
chr3 (104-161)||(16795525-16795582)
chr3 (104-161)||(4590160-4590217)
chr3 (104-161)||(8491732-8491789)
chr3 (104-161)||(13435840-13435897)
chr3 (114-161)||(3801992-3802039)
chr3 (114-161)||(12304196-12304243)
chr3 (114-161)||(14764805-14764852)
chr3 (106-161)||(17318511-17318566)
chr3 (114-161)||(18899475-18899522)
chr3 (114-161)||(20249859-20249906)
chr3 (114-161)||(54519619-54519666)
chr3 (108-161)||(8928871-8928924)
chr3 (104-161)||(16751901-16751958)
chr3 (104-157)||(18933355-18933408)
chr3 (104-157)||(30064411-30064464)
chr3 (114-161)||(9532280-9532327)
chr3 (122-161)||(14681572-14681611)
chr3 (114-161)||(29545948-29545995)
chr3 (172-222)||(16840452-16840502)
chr3 (114-160)||(38312867-38312913)
chr3 (104-161)||(5219869-5219926)
chr3 (1-34)||(5841483-5841516)
chr3 (104-161)||(11853728-11853785)
chr3 (120-161)||(15463900-15463941)
chr3 (120-161)||(23372559-23372600)
chr3 (120-161)||(51299555-51299596)
chr3 (104-159)||(14068062-14068117)
chr3 (122-161)||(19774220-19774259)
chr3 (104-155)||(37440680-37440731)
chr3 (119-161)||(11301680-11301722)
chr3 (119-161)||(14664447-14664489)
chr3 (119-161)||(14667611-14667653)
chr3 (119-161)||(23173319-23173361)
chr3 (104-157)||(7108264-7108317)
chr3 (104-157)||(7112199-7112252)
chr3 (104-157)||(11068639-11068692)
chr3 (104-157)||(14497973-14498026)
chr3 (104-157)||(22320155-22320208)
chr3 (104-157)||(22335210-22335263)
chr3 (104-157)||(55021402-55021455)
chr3 (7-35)||(41352-41380)
chr3 (7-35)||(5841552-5841580)
chr3 (7-35)||(16325740-16325768)
chr3 (7-35)||(16325807-16325835)
chr3 (7-35)||(16325874-16325902)
chr3 (9-37)||(16840007-16840035)
[»] chr1 (23 HSPs)
chr1 (10-226)||(11944951-11945167)
chr1 (10-226)||(43630898-43631114)
chr1 (14-225)||(11809859-11810078)
chr1 (12-137)||(636478-636596)
chr1 (109-226)||(20032180-20032297)
chr1 (10-68)||(20032127-20032185)
chr1 (79-161)||(29533909-29533992)
chr1 (104-161)||(22132098-22132155)
chr1 (104-161)||(21406275-21406332)
chr1 (104-161)||(41801278-41801335)
chr1 (114-161)||(16370947-16370994)
chr1 (104-157)||(20230138-20230191)
chr1 (104-161)||(39245170-39245227)
chr1 (104-161)||(39248725-39248782)
chr1 (104-161)||(41389664-41389721)
chr1 (120-161)||(32649089-32649130)
chr1 (104-161)||(33796055-33796112)
chr1 (104-157)||(1009288-1009341)
chr1 (104-157)||(1926795-1926848)
chr1 (104-157)||(16376815-16376868)
chr1 (104-157)||(20925809-20925862)
chr1 (104-157)||(52634294-52634347)
chr1 (7-35)||(636439-636467)
[»] chr4 (34 HSPs)
chr4 (10-226)||(37839097-37839313)
chr4 (10-226)||(42597826-42598042)
chr4 (1-161)||(28384873-28385033)
chr4 (104-161)||(631747-631804)
chr4 (104-161)||(13813832-13813889)
chr4 (104-161)||(13818320-13818377)
chr4 (104-161)||(22634926-22634983)
chr4 (104-161)||(24048384-24048441)
chr4 (104-161)||(10711847-10711904)
chr4 (104-161)||(10925617-10925674)
chr4 (104-161)||(12422965-12423022)
chr4 (104-161)||(17052445-17052502)
chr4 (104-161)||(27532774-27532831)
chr4 (114-161)||(15533241-15533288)
chr4 (114-161)||(36036974-36037021)
chr4 (114-161)||(49549092-49549139)
chr4 (104-154)||(23996966-23997016)
chr4 (119-161)||(30145805-30145847)
chr4 (104-161)||(15223568-15223625)
chr4 (114-161)||(18211626-18211673)
chr4 (104-161)||(20158447-20158504)
chr4 (104-161)||(20163898-20163955)
chr4 (104-157)||(4562773-4562826)
chr4 (104-157)||(5758455-5758508)
chr4 (104-157)||(9555095-9555148)
chr4 (104-157)||(12486297-12486350)
chr4 (104-157)||(14758991-14759044)
chr4 (104-157)||(14955759-14955812)
chr4 (104-157)||(17807080-17807133)
chr4 (104-161)||(20161123-20161180)
chr4 (104-157)||(25688468-25688521)
chr4 (104-157)||(33740862-33740915)
chr4 (93-161)||(38106968-38107037)
chr4 (55-112)||(49548998-49549055)
[»] chr8 (42 HSPs)
chr8 (10-226)||(44494129-44494345)
chr8 (9-226)||(21967897-21968122)
chr8 (9-226)||(21980737-21980962)
chr8 (9-226)||(21985720-21985945)
chr8 (10-226)||(22009102-22009326)
chr8 (14-226)||(11251997-11252204)
chr8 (10-226)||(34950043-34950259)
chr8 (1-161)||(11774318-11774478)
chr8 (1-161)||(8414873-8415033)
chr8 (9-191)||(22000688-22000873)
chr8 (9-161)||(21328588-21328740)
chr8 (9-161)||(42560786-42560938)
chr8 (155-226)||(42561025-42561096)
chr8 (104-161)||(21386181-21386238)
chr8 (104-161)||(23427848-23427905)
chr8 (104-161)||(23913287-23913344)
chr8 (104-157)||(44385833-44385886)
chr8 (187-226)||(22003050-22003089)
chr8 (104-161)||(14399092-14399149)
chr8 (104-157)||(21409927-21409980)
chr8 (104-157)||(21804419-21804472)
chr8 (119-160)||(27942700-27942741)
chr8 (9-38)||(21967862-21967891)
chr8 (104-157)||(21974183-21974236)
chr8 (9-38)||(21980702-21980731)
chr8 (9-38)||(21985685-21985714)
chr8 (9-38)||(22000653-22000682)
chr8 (9-38)||(22009066-22009095)
chr8 (104-157)||(43250228-43250281)
chr8 (7-35)||(8414809-8414837)
chr8 (7-35)||(11774514-11774542)
chr8 (7-35)||(11774581-11774609)
chr8 (9-37)||(16197694-16197722)
chr8 (9-37)||(16197728-16197756)
chr8 (9-37)||(21328745-21328773)
chr8 (9-37)||(21328779-21328807)
chr8 (9-37)||(21328813-21328841)
chr8 (104-156)||(21978293-21978345)
chr8 (9-37)||(21980534-21980562)
chr8 (9-37)||(21985517-21985545)
chr8 (9-37)||(22000552-22000580)
chr8 (9-37)||(22005531-22005559)
[»] chr7 (53 HSPs)
chr7 (10-226)||(11394784-11395000)
chr7 (14-225)||(16185474-16185693)
chr7 (1-161)||(41283667-41283827)
chr7 (9-161)||(15213070-15213222)
chr7 (104-177)||(18301357-18301430)
chr7 (104-161)||(10607320-10607377)
chr7 (104-161)||(11660304-11660361)
chr7 (104-161)||(13891652-13891709)
chr7 (104-161)||(13892035-13892092)
chr7 (104-161)||(20486764-20486821)
chr7 (104-161)||(39268313-39268370)
chr7 (155-226)||(15212912-15212983)
chr7 (104-161)||(7520215-7520272)
chr7 (104-161)||(9752507-9752564)
chr7 (104-161)||(25928371-25928428)
chr7 (114-161)||(146522-146569)
chr7 (114-161)||(14420809-14420856)
chr7 (114-161)||(16005026-16005073)
chr7 (114-161)||(18606360-18606407)
chr7 (114-161)||(18871319-18871366)
chr7 (119-161)||(838148-838190)
chr7 (119-161)||(1203328-1203370)
chr7 (119-161)||(16109990-16110032)
chr7 (104-161)||(16582443-16582500)
chr7 (104-161)||(18424257-18424314)
chr7 (104-157)||(26291183-26291236)
chr7 (104-157)||(39721222-39721275)
chr7 (114-161)||(10897906-10897953)
chr7 (120-161)||(1860037-1860078)
chr7 (104-161)||(2833481-2833538)
chr7 (1-34)||(11394607-11394640)
chr7 (120-161)||(13919428-13919469)
chr7 (104-157)||(15083252-15083305)
chr7 (9-112)||(13892119-13892221)
chr7 (119-161)||(834060-834102)
chr7 (119-161)||(1199240-1199282)
chr7 (7-37)||(29003776-29003806)
chr7 (7-37)||(34957159-34957189)
chr7 (104-157)||(31751-31804)
chr7 (104-157)||(12706122-12706175)
chr7 (104-157)||(12713566-12713619)
chr7 (104-157)||(12722224-12722277)
chr7 (9-38)||(15213397-15213426)
chr7 (104-157)||(16908509-16908562)
chr7 (104-157)||(18281984-18282037)
chr7 (7-35)||(11394543-11394571)
chr7 (9-37)||(15213328-15213356)
chr7 (9-37)||(16251547-16251575)
chr7 (9-37)||(16251744-16251772)
chr7 (9-37)||(16251810-16251838)
chr7 (8-68)||(16251909-16251969)
chr7 (9-37)||(34957122-34957150)
chr7 (7-35)||(41283863-41283891)
[»] chr6 (40 HSPs)
chr6 (10-226)||(28707816-28708032)
chr6 (14-224)||(9622823-9623032)
chr6 (1-161)||(23955391-23955551)
chr6 (9-161)||(34297677-34297829)
chr6 (9-161)||(25737914-25738066)
chr6 (109-212)||(14594666-14594769)
chr6 (114-212)||(7429398-7429496)
chr6 (155-226)||(1254019-1254090)
chr6 (10-65)||(7429499-7429554)
chr6 (155-226)||(34297916-34297987)
chr6 (11-68)||(14594614-14594671)
chr6 (104-161)||(18918580-18918637)
chr6 (104-157)||(23400704-23400757)
chr6 (104-161)||(23538003-23538060)
chr6 (114-161)||(12941243-12941290)
chr6 (152-207)||(25737775-25737830)
chr6 (114-161)||(27222854-27222901)
chr6 (119-161)||(1254181-1254223)
chr6 (104-161)||(2076308-2076365)
chr6 (114-161)||(28290904-28290951)
chr6 (120-161)||(4475817-4475858)
chr6 (104-161)||(16622857-16622914)
chr6 (104-161)||(27555561-27555618)
chr6 (1-34)||(28708176-28708209)
chr6 (104-161)||(31479462-31479519)
chr6 (104-159)||(18953483-18953538)
chr6 (119-161)||(22075405-22075447)
chr6 (119-161)||(27416542-27416584)
chr6 (104-157)||(8242438-8242491)
chr6 (104-157)||(11565427-11565480)
chr6 (104-157)||(11716940-11716993)
chr6 (104-157)||(12620333-12620386)
chr6 (9-38)||(25738168-25738197)
chr6 (7-35)||(23955587-23955615)
chr6 (7-35)||(23955654-23955682)
chr6 (7-35)||(28708245-28708273)
chr6 (9-37)||(34297329-34297357)
chr6 (9-37)||(34297400-34297428)
chr6 (9-37)||(34297505-34297533)
chr6 (9-37)||(34297574-34297602)
[»] scaffold0815 (1 HSPs)
scaffold0815 (12-192)||(1-181)
[»] scaffold0016 (2 HSPs)
scaffold0016 (12-226)||(173133-173338)
scaffold0016 (9-37)||(172865-172893)
[»] scaffold0679 (3 HSPs)
scaffold0679 (10-154)||(3171-3315)
scaffold0679 (1-34)||(2994-3027)
scaffold0679 (7-35)||(2930-2958)
[»] chr2 (18 HSPs)
chr2 (10-161)||(37379058-37379209)
chr2 (107-161)||(21074510-21074564)
chr2 (104-161)||(9784016-9784073)
chr2 (114-161)||(6481806-6481853)
chr2 (114-161)||(6485273-6485320)
chr2 (114-161)||(9240696-9240743)
chr2 (114-161)||(19663567-19663614)
chr2 (114-161)||(20260279-20260326)
chr2 (9-45)||(22702873-22702909)
chr2 (7-38)||(22702916-22702947)
chr2 (9-38)||(18359200-18359229)
chr2 (104-157)||(24630047-24630100)
chr2 (104-157)||(24645177-24645230)
chr2 (104-157)||(24647953-24648006)
chr2 (104-157)||(27380993-27381046)
chr2 (104-157)||(27384963-27385016)
chr2 (104-157)||(27600397-27600450)
chr2 (104-157)||(30346657-30346710)
[»] scaffold0001 (8 HSPs)
scaffold0001 (1-124)||(175425-175548)
scaffold0001 (152-226)||(163708-163782)
scaffold0001 (9-99)||(163504-163594)
scaffold0001 (8-112)||(153681-153785)
scaffold0001 (125-161)||(163588-163624)
scaffold0001 (9-37)||(153284-153312)
scaffold0001 (9-37)||(153350-153378)
scaffold0001 (7-35)||(175584-175612)
[»] scaffold0098 (2 HSPs)
scaffold0098 (109-226)||(34011-34128)
scaffold0098 (10-68)||(34123-34181)
[»] scaffold2015 (2 HSPs)
scaffold2015 (109-212)||(444-547)
scaffold2015 (10-68)||(391-449)
[»] scaffold0599 (2 HSPs)
scaffold0599 (29-161)||(4143-4275)
scaffold0599 (155-226)||(3985-4056)
[»] scaffold0293 (1 HSPs)
scaffold0293 (104-175)||(21339-21410)
[»] scaffold0015 (2 HSPs)
scaffold0015 (9-70)||(208655-208716)
scaffold0015 (9-38)||(208722-208751)
[»] scaffold0575 (1 HSPs)
scaffold0575 (104-161)||(6960-7017)
[»] scaffold0031 (1 HSPs)
scaffold0031 (104-161)||(37202-37259)
[»] scaffold0013 (1 HSPs)
scaffold0013 (104-161)||(74331-74388)
[»] scaffold0124 (1 HSPs)
scaffold0124 (106-161)||(25569-25624)
[»] scaffold0380 (1 HSPs)
scaffold0380 (104-161)||(3996-4053)
[»] scaffold0139 (1 HSPs)
scaffold0139 (104-161)||(23937-23994)
[»] scaffold0080 (6 HSPs)
scaffold0080 (104-161)||(28494-28551)
scaffold0080 (104-161)||(33959-34016)
scaffold0080 (8-110)||(28580-28682)
scaffold0080 (8-110)||(34045-34147)
scaffold0080 (9-38)||(28751-28780)
scaffold0080 (9-38)||(34216-34245)
[»] scaffold0029 (1 HSPs)
scaffold0029 (104-161)||(62839-62896)
[»] scaffold1427 (1 HSPs)
scaffold1427 (114-161)||(222-269)
[»] scaffold0842 (1 HSPs)
scaffold0842 (114-161)||(5264-5311)
[»] scaffold0337 (1 HSPs)
scaffold0337 (114-161)||(10831-10878)
[»] scaffold0109 (1 HSPs)
scaffold0109 (104-159)||(37197-37252)
[»] scaffold0026 (1 HSPs)
scaffold0026 (114-161)||(109623-109670)
[»] scaffold0012 (1 HSPs)
scaffold0012 (114-161)||(224152-224199)
[»] scaffold0142 (1 HSPs)
scaffold0142 (104-161)||(8739-8796)
[»] scaffold0327 (1 HSPs)
scaffold0327 (114-161)||(18845-18892)
[»] scaffold0544 (1 HSPs)
scaffold0544 (120-161)||(3532-3573)
[»] scaffold0410 (1 HSPs)
scaffold0410 (104-161)||(14866-14923)
[»] scaffold0486 (1 HSPs)
scaffold0486 (104-160)||(8600-8656)
[»] scaffold0066 (1 HSPs)
scaffold0066 (7-38)||(48145-48176)
[»] scaffold1852 (1 HSPs)
scaffold1852 (119-161)||(835-877)
[»] scaffold0200 (1 HSPs)
scaffold0200 (123-161)||(10789-10827)
[»] scaffold0023 (1 HSPs)
scaffold0023 (119-161)||(11799-11841)
[»] scaffold0003 (1 HSPs)
scaffold0003 (119-161)||(70777-70819)
[»] scaffold0372 (1 HSPs)
scaffold0372 (104-157)||(6320-6373)
[»] scaffold0349 (1 HSPs)
scaffold0349 (104-157)||(11077-11130)
[»] scaffold0299 (1 HSPs)
scaffold0299 (120-161)||(5847-5888)
[»] scaffold0166 (1 HSPs)
scaffold0166 (104-161)||(11059-11116)
[»] scaffold0157 (1 HSPs)
scaffold0157 (104-157)||(34127-34180)
[»] scaffold0028 (1 HSPs)
scaffold0028 (104-157)||(60325-60378)


Alignment Details
Target: chr5 (Bit Score: 209; Significance: 1e-114; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 10 - 226
Target Start/End: Complemental strand, 19076062 - 19075846
Alignment:
Q  10 tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatattaca 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19076062 tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatattaca 19075963  T
Q  110 tgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttgtcttctattcatgagcactaaggggatgttaaggagaattattattga 209  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19075962 tgaggttacctatgagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgagcactaaggggatgttaaggagaattattattga 19075863  T
Q  210 gtgtatatgatgatgtc 226  Q
     ||||||||||||||||    
T  19075862 atgtatatgatgatgtc 19075846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 10 - 226
Target Start/End: Original strand, 31253116 - 31253332
Alignment:
Q  10 tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatattaca 109  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31253116 tataagaggtggtgtactcttaccttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatattaca 31253215  T
Q  110 tgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttgtcttctattcatgagcactaaggggatgttaaggagaattattattga 209  Q
    ||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  31253216 tgaggttacctacaagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgagcactaaggggatgttaaggagaattatcattga 31253315  T
Q  210 gtgtatatgatgatgtc 226  Q
    |||||||||||||||||    
T  31253316 gtgtatatgatgatgtc 31253332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 33473828 - 33473988
Alignment:
Q  1 attgtctgttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttat 100  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||  ||||||||| | |||||||||    
T  33473828 attgtctgttataagaggtggtgtactcttacgttgtttatgttgatgagtatgacgaggttatgatgatcttttatgatgttgaatgtggggttgttat 33473927  T
Q  101 gatattacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  33473928 gatattacatgaggttacccatgagttgttaaatgtacttgatgagggttatgttaagttg 33473988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 161
Target Start/End: Complemental strand, 36459722 - 36459570
Alignment:
Q  9 ttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatattac 108  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||||  | |||||||||||||| |||| |||| |||| ||||    
T  36459722 ttataagaggtggtgtactcttacgttgtttatgttgatgattatgacgatgttatgatgattgtttatagtgttgaatgagaggctgttttgatgttac 36459623  T
Q  109 atgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||| |||| |||||||||||||||||||||| |||| | |||||||||||||    
T  36459622 atgatgttatctatgagttgttaaatgtacttaatgatgattatgttaagttg 36459570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 109 - 212
Target Start/End: Original strand, 43243764 - 43243867
Alignment:
Q  109 atgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttgtcttctattcatgagcactaaggggatgttaaggagaattattattg 208  Q
    |||| |||||||||||||||||||||||||| || || |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||     
T  43243764 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttgtcttctattcatgagcattaaggggatgttaagaagaattattatta 43243863  T
Q  209 agtg 212  Q
    ||||    
T  43243864 agtg 43243867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 155 - 226
Target Start/End: Complemental strand, 36459483 - 36459412
Alignment:
Q  155 taagttgtcttctattcatgagcactaaggggatgttaaggagaattattattgagtgtatatgatgatgtc 226  Q
    |||||||||||||||||||||| ||||||||||||||||| | ||||||||||| ||| || ||||||||||    
T  36459483 taagttgtcttctattcatgagtactaaggggatgttaagaaaaattattattgggtggatttgatgatgtc 36459412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 10 - 68
Target Start/End: Original strand, 43243711 - 43243769
Alignment:
Q  10 tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatg 68  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||    
T  43243711 tataagaggtggtttactcttacgttgtttatgttgatgagtatgatgaggttatgatg 43243769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 15238117 - 15238174
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||| |||| ||||||||||||||||||||||||||| | |||||||||||||    
T  15238117 attacatgatgttatctatgagttgttaaatgtacttgatgatgtttatgttaagttg 15238174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 22120591 - 22120648
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||| |||| |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  22120591 attatatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 22120648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 114 - 161
Target Start/End: Complemental strand, 19510531 - 19510484
Alignment:
Q  114 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  19510531 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 19510484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 114 - 161
Target Start/End: Original strand, 28372091 - 28372138
Alignment:
Q  114 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  28372091 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 28372138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 114 - 161
Target Start/End: Original strand, 37600018 - 37600065
Alignment:
Q  114 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  37600018 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 37600065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 10751896 - 10751839
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||||||||  ||| ||||||||||||||||||||||||||| | |||||||||||||    
T  10751896 attacatgatattatctatgagttgttaaatgtacttgatgatgtttatgttaagttg 10751839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 161
Target Start/End: Complemental strand, 22339081 - 22339034
Alignment:
Q  114 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||| ||||||||||||||||||||||||||| |||||||||| ||||    
T  22339081 gttatctatgagttgttaaatgtacttgatgatggttatgttacgttg 22339034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 161
Target Start/End: Complemental strand, 22749230 - 22749183
Alignment:
Q  114 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||| |||||||| |||||||||||||||||| |||||||||||||||    
T  22749230 gttatctatgagtggttaaatgtacttgatgatggttatgttaagttg 22749183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 161
Target Start/End: Original strand, 38146428 - 38146475
Alignment:
Q  114 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||| ||||||||||||||||||||||||||| | |||||||||||||    
T  38146428 gttatctatgagttgttaaatgtacttgatgatgattatgttaagttg 38146475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 161
Target Start/End: Original strand, 41878661 - 41878708
Alignment:
Q  114 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||| |||||||||||||||||||||||||||  ||||||||||||||    
T  41878661 gttatctatgagttgttaaatgtacttgatgatagttatgttaagttg 41878708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 18354876 - 18354819
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||||||    
T  18354876 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaagttg 18354819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 20912252 - 20912309
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||| |||| |||||||||||||| |||||||||||| |  ||||||||||||    
T  20912252 attacatgatgttatctatgagttgttaagtgtacttgatgatgtgtatgttaagttg 20912309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 145
Target Start/End: Original strand, 22108449 - 22108490
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatga 145  Q
    ||||||||| |||| |||||||||||||||||||||||||||    
T  22108449 attacatgatgttatctatgagttgttaaatgtacttgatga 22108490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 114 - 161
Target Start/End: Complemental strand, 22335551 - 22335504
Alignment:
Q  114 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||| ||||||||||||||||||| ||||||| |||||||||| ||||    
T  22335551 gttatctatgagttgttaaatgtatttgatgatggttatgttacgttg 22335504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 114 - 161
Target Start/End: Original strand, 23113412 - 23113459
Alignment:
Q  114 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||| ||||||||||||||||||||||||||| | || ||||||||||    
T  23113412 gttatctatgagttgttaaatgtacttgatgatgattgtgttaagttg 23113459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 157
Target Start/End: Original strand, 19474172 - 19474225
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 157  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  19474172 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 19474225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 20294593 - 20294540
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 157  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  20294593 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 20294540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 24768562 - 24768619
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||| | || |||||||||||||| ||||| |||||| | |||||||||||||    
T  24768562 attacatgatgatatctatgagttgttaagtgtacctgatgatgtttatgttaagttg 24768619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 145
Target Start/End: Complemental strand, 9775014 - 9774978
Alignment:
Q  109 atgaggttacctatgagttgttaaatgtacttgatga 145  Q
    |||| |||| |||||||||||||||||||||||||||    
T  9775014 atgatgttatctatgagttgttaaatgtacttgatga 9774978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 35
Target Start/End: Original strand, 33473630 - 33473658
Alignment:
Q  7 tgttataagaggtggtgtactcttacttt 35  Q
    |||||||||||||||||||||||||||||    
T  33473630 tgttataagaggtggtgtactcttacttt 33473658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 35
Target Start/End: Original strand, 33473697 - 33473725
Alignment:
Q  7 tgttataagaggtggtgtactcttacttt 35  Q
    |||||||||||||||||||||||||||||    
T  33473697 tgttataagaggtggtgtactcttacttt 33473725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 35
Target Start/End: Original strand, 33473764 - 33473792
Alignment:
Q  7 tgttataagaggtggtgtactcttacttt 35  Q
    |||||||||||||||||||||||||||||    
T  33473764 tgttataagaggtggtgtactcttacttt 33473792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 37
Target Start/End: Complemental strand, 36459824 - 36459796
Alignment:
Q  9 ttataagaggtggtgtactcttactttgt 37  Q
    |||||||||||||||||||||||||||||    
T  36459824 ttataagaggtggtgtactcttactttgt 36459796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 209; Significance: 1e-114; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 10 - 226
Target Start/End: Original strand, 45220868 - 45221084
Alignment:
Q  10 tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatattaca 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45220868 tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatattaca 45220967  T
Q  110 tgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttgtcttctattcatgagcactaaggggatgttaaggagaattattattga 209  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  45220968 tgaggttacctatgagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgagcactacggggatgttaaggagaattattattga 45221067  T
Q  210 gtgtatatgatgatgtc 226  Q
    |||||||||||||||||    
T  45221068 gtgtatatgatgatgtc 45221084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 10 - 226
Target Start/End: Complemental strand, 5841339 - 5841123
Alignment:
Q  10 tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatattaca 109  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5841339 tataagaggtggtgtactcttacgttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatattaca 5841240  T
Q  110 tgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttgtcttctattcatgagcactaaggggatgttaaggagaattattattga 209  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| | |||||||||||||||||||||||    
T  5841239 tgaggttacctatgagttgttaaatgtacttgatgagggttatgttaagttgacttctattcatgagcactaagagaatgttaaggagaattattattga 5841140  T
Q  210 gtgtatatgatgatgtc 226  Q
     ||||| ||||||||||    
T  5841139 atgtatctgatgatgtc 5841123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 14 - 226
Target Start/End: Original strand, 2249126 - 2249338
Alignment:
Q  14 agaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatattacatgag 113  Q
    ||||||||||||||||||| | || |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||     
T  2249126 agaggtggtgtactcttacgtggtctatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgtgaggttgttatgatattacatgat 2249225  T
Q  114 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttgtcttctattcatgagcactaaggggatgttaaggagaattattattgagtgt 213  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||    
T  2249226 gttacctatgagttattaaatgtacttgatgagggttatgttaagttgtcttctattcatgagcactaaggggatgttaagaagaagaattattgagtgt 2249325  T
Q  214 atatgatgatgtc 226  Q
    |||||||||||||    
T  2249326 atatgatgatgtc 2249338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 41316 - 41156
Alignment:
Q  1 attgtctgttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttat 100  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||  ||||||||| | |||||||||    
T  41316 attgtctgttataagaggtggtgtactcttacgttgtttatgttgatgagtatgacgaggttatgatgatcttttatgatgttgaatgtggggttgttat 41217  T
Q  101 gatattacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  41216 gatattacatgaggttacctatgagttgttaaatgtacttgatgagggttatgttaagttg 41156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 16325938 - 16326098
Alignment:
Q  1 attgtctgttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttat 100  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||  ||||||||  |||||||||||    
T  16325938 attgtctgttataagaggtggtgtactcttacgttgtttatgttgatgagtatgacgaagttatgatgatcttttatgatgttgaatatgaggttgttat 16326037  T
Q  101 gatattacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  16326038 gatattacatgaggttacctatgagttgttaaatgtacttgatgagggttatgtcaagttg 16326098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 9 - 161
Target Start/End: Original strand, 16840108 - 16840260
Alignment:
Q  9 ttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatattac 108  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||| || |||||||||||  | |||||||||||||| |||||||||||||| ||||    
T  16840108 ttataagaggtggtgtactcttacgttgtttatgttgatgattatgatgatgttatgatgattgtttatagtgttgaatgtgaggttgttatgatgttac 16840207  T
Q  109 atgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||  ||| ||||||||||||||||||| ||||||| |||||||||||||||    
T  16840208 atgattttatctatgagttgttaaatgtatttgatgatggttatgttaagttg 16840260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 109 - 212
Target Start/End: Original strand, 14648275 - 14648378
Alignment:
Q  109 atgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttgtcttctattcatgagcactaaggggatgttaaggagaattattattg 208  Q
    |||| |||||||||||||||||||||||||| || || |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  14648275 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttgtcttctattcatgagcattaaggggatgttaagaagaattattattg 14648374  T
Q  209 agtg 212  Q
    ||||    
T  14648375 agtg 14648378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 29 - 161
Target Start/End: Complemental strand, 11912581 - 11912449
Alignment:
Q  29 ttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatattacatgaggttacctatgagttg 128  Q
    |||| |||||||||||||||| ||||| || |||||||||||  | |||||||||||||| |||| | || |||| |||||||| |||| ||||||||||    
T  11912581 ttacgttgtttatgttgatgattatgatgatgttatgatgattgtttatagtgttgaatgagaggcttttttgatgttacatgatgttatctatgagttg 11912482  T
Q  129 ttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||||||||||| |||||||||||||||    
T  11912481 ttaaatgtacttgatgatggttatgttaagttg 11912449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 79 - 161
Target Start/End: Original strand, 10834915 - 10834998
Alignment:
Q  79 gtgttgaatgcgaggttgttatgat-attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||||||||  |||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  10834915 gtgttgaatatgaggttgttatgatgattacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 10834998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 155 - 226
Target Start/End: Complemental strand, 11912362 - 11912291
Alignment:
Q  155 taagttgtcttctattcatgagcactaaggggatgttaaggagaattattattgagtgtatatgatgatgtc 226  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||| || ||||||||||    
T  11912362 taagttgtcttctattcatgagtactaaggggatgttaagaagaattattattgggtggatttgatgatgtc 11912291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 155 - 226
Target Start/End: Original strand, 51608665 - 51608736
Alignment:
Q  155 taagttgtcttctattcatgagcactaaggggatgttaaggagaattattattgagtgtatatgatgatgtc 226  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||| || ||||||||||    
T  51608665 taagttgtcttctattcatgagtactaaggggatgttaagaagaattattattgggtggatttgatgatgtc 51608736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 10 - 68
Target Start/End: Original strand, 14648222 - 14648280
Alignment:
Q  10 tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatg 68  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  14648222 tataagaggtggtgtactcttacgttgtttatgttgatgagtatgatgaggttatgatg 14648280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 7 - 112
Target Start/End: Complemental strand, 13436029 - 13435924
Alignment:
Q  7 tgttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatatt 106  Q
    ||||||||||||||||||||||| || |||||||||||| ||| |||||||| ||||||||||   | ||| |||||||||  |||||||||||||| ||    
T  13436029 tgttataagaggtggtgtactctcacgttgtttatgttgttgattatgacgatgttatgatgactgtttatggtgttgaatatgaggttgttatgatgtt 13435930  T
Q  107 acatga 112  Q
     |||||    
T  13435929 tcatga 13435924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 8 - 112
Target Start/End: Original strand, 8928736 - 8928840
Alignment:
Q  8 gttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatatta 107  Q
    ||||| |||||||||||||||| || |||||||||||| ||| |||||||| ||||||||||  || ||| | |||||||  |||||||||||||| |||    
T  8928736 gttatgagaggtggtgtactctcacgttgtttatgttgttgattatgacgatgttatgatgactttttatggagttgaatatgaggttgttatgatgtta 8928835  T
Q  108 catga 112  Q
    |||||    
T  8928836 catga 8928840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 152 - 207
Target Start/End: Original strand, 16840344 - 16840399
Alignment:
Q  152 tgttaagttgtcttctattcatgagcactaaggggatgttaaggagaattattatt 207  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  16840344 tgttaagttgtcttctattcatgagtactaaggggatgttaagaagaattattatt 16840399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 12853363 - 12853420
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  12853363 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 12853420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 14670105 - 14670048
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  14670105 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 14670048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 16795582 - 16795525
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  16795582 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 16795525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 4590160 - 4590217
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  4590160 attacatgatgttatctaggagttgttaaatgtacttgatgatggttatgttaagttg 4590217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 8491732 - 8491789
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  8491732 attacatgatgttatctaggagttgttaaatgtacttgatgatggttatgttaagttg 8491789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 13435897 - 13435840
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||| ||||  |||||||||||||||||||||||||| |||||||||||||||    
T  13435897 attacatgatgttatatatgagttgttaaatgtacttgatgatggttatgttaagttg 13435840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 114 - 161
Target Start/End: Complemental strand, 3802039 - 3801992
Alignment:
Q  114 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  3802039 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 3801992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 114 - 161
Target Start/End: Complemental strand, 12304243 - 12304196
Alignment:
Q  114 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  12304243 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 12304196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 114 - 161
Target Start/End: Original strand, 14764805 - 14764852
Alignment:
Q  114 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  14764805 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 14764852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 106 - 161
Target Start/End: Original strand, 17318511 - 17318566
Alignment:
Q  106 tacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  17318511 tacatgaagttatctaggagttgttaaatgtacttgatgatggttatgttaagttg 17318566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 114 - 161
Target Start/End: Complemental strand, 18899522 - 18899475
Alignment:
Q  114 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  18899522 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 18899475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 114 - 161
Target Start/End: Original strand, 20249859 - 20249906
Alignment:
Q  114 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  20249859 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 20249906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 114 - 161
Target Start/End: Complemental strand, 54519666 - 54519619
Alignment:
Q  114 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  54519666 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 54519619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 161
Target Start/End: Original strand, 8928871 - 8928924
Alignment:
Q  108 catgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||| |||| ||||||||||||||||||||||||||  |||||||||||||||    
T  8928871 catgatgttatctatgagttgttaaatgtacttgatggtggttatgttaagttg 8928924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 16751901 - 16751958
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||||||||  ||| ||||||||||||||||||||||||||| | |||||||||||||    
T  16751901 attacatgatattatctatgagttgttaaatgtacttgatgatgtttatgttaagttg 16751958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 157
Target Start/End: Original strand, 18933355 - 18933408
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 157  Q
    ||||||||| |||| |||||||||||||| |||||||||||| |||||||||||    
T  18933355 attacatgatgttatctatgagttgttaagtgtacttgatgatggttatgttaa 18933408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 30064464 - 30064411
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 157  Q
    ||||||||| |||| |||||||||||||| |||||||||||| |||||||||||    
T  30064464 attacatgatgttatctatgagttgttaagtgtacttgatgatggttatgttaa 30064411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 161
Target Start/End: Complemental strand, 9532327 - 9532280
Alignment:
Q  114 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||| ||||||||||||||||||||||||||| ||||||||| |||||    
T  9532327 gttatctatgagttgttaaatgtacttgatgatggttatgttgagttg 9532280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 161
Target Start/End: Complemental strand, 14681611 - 14681572
Alignment:
Q  122 tgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  14681611 tgagttgttaaatgtacttgatgatggttatgttaagttg 14681572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 161
Target Start/End: Original strand, 29545948 - 29545995
Alignment:
Q  114 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||| ||||||||||||||||||||||||||| |||| ||||||||||    
T  29545948 gttatctatgagttgttaaatgtacttgatgatggttgtgttaagttg 29545995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 172 - 222
Target Start/End: Original strand, 16840452 - 16840502
Alignment:
Q  172 atgagcactaaggggatgttaaggagaattattattgagtgtatatgatga 222  Q
    ||||| ||||||||||||||||| ||||||||||||||||| || ||||||    
T  16840452 atgagtactaaggggatgttaagaagaattattattgagtggatttgatga 16840502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 114 - 160
Target Start/End: Original strand, 38312867 - 38312913
Alignment:
Q  114 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagtt 160  Q
    |||| |||||||| |||||||||||||||||| ||||||||||||||    
T  38312867 gttatctatgagtggttaaatgtacttgatgatggttatgttaagtt 38312913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 5219926 - 5219869
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||||||    
T  5219926 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaagttg 5219869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 5841516 - 5841483
Alignment:
Q  1 attgtctgttataagaggtggtgtactcttactt 34  Q
    ||||||||||||||||||||||||||||||||||    
T  5841516 attgtctgttataagaggtggtgtactcttactt 5841483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 11853785 - 11853728
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||||||    
T  11853785 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaagttg 11853728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 161
Target Start/End: Complemental strand, 15463941 - 15463900
Alignment:
Q  120 tatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||||||||||||||||||||||||| | |||||||||||||    
T  15463941 tatgagttgttaaatgtacttgatgacgtttatgttaagttg 15463900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 161
Target Start/End: Original strand, 23372559 - 23372600
Alignment:
Q  120 tatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||||||||||||||||||||  ||||||||||||||    
T  23372559 tatgagttgttaaatgtacttgatgattgttatgttaagttg 23372600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 161
Target Start/End: Complemental strand, 51299596 - 51299555
Alignment:
Q  120 tatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||||||||||||||||||||  ||||||||||||||    
T  51299596 tatgagttgttaaatgtacttgatgattgttatgttaagttg 51299555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 159
Target Start/End: Original strand, 14068062 - 14068117
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagt 159  Q
    ||||||||| |||| ||| |||||| |||||||| ||||||| |||||||||||||    
T  14068062 attacatgatgttatctaggagttgctaaatgtatttgatgatggttatgttaagt 14068117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 161
Target Start/End: Complemental strand, 19774259 - 19774220
Alignment:
Q  122 tgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||||||||||||||||||||||| | |||||||||||||    
T  19774259 tgagttgttaaatgtacttgatgatgtttatgttaagttg 19774220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 155
Target Start/End: Original strand, 37440680 - 37440731
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgtt 155  Q
    ||||||||| | || |||||||||||||| |||||||||||| |||||||||    
T  37440680 attacatgatgatatctatgagttgttaagtgtacttgatgatggttatgtt 37440731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 161
Target Start/End: Original strand, 11301680 - 11301722
Alignment:
Q  119 ctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||||||||||||| |||||||||||| | |||||||||||||    
T  11301680 ctatgagttgttaagtgtacttgatgatgtttatgttaagttg 11301722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 161
Target Start/End: Complemental strand, 14664489 - 14664447
Alignment:
Q  119 ctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||||||||||||| |||||||||||| | |||||||||||||    
T  14664489 ctatgagttgttaagtgtacttgatgatgtttatgttaagttg 14664447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 161
Target Start/End: Complemental strand, 14667653 - 14667611
Alignment:
Q  119 ctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||||||||||||| |||||||||||| | |||||||||||||    
T  14667653 ctatgagttgttaagtgtacttgatgatgtttatgttaagttg 14667611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 161
Target Start/End: Complemental strand, 23173361 - 23173319
Alignment:
Q  119 ctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||||||||||||||| ||||||||||  ||||||||||||||    
T  23173361 ctatgagttgttaaatatacttgatgatagttatgttaagttg 23173319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 7108317 - 7108264
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 157  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  7108317 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 7108264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 7112252 - 7112199
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 157  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  7112252 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 7112199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 11068692 - 11068639
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 157  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  11068692 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 11068639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 14498026 - 14497973
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 157  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  14498026 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 14497973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 22320208 - 22320155
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 157  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  22320208 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 22320155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 22335263 - 22335210
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 157  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  22335263 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 22335210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 55021455 - 55021402
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 157  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  55021455 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 55021402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 35
Target Start/End: Complemental strand, 41380 - 41352
Alignment:
Q  7 tgttataagaggtggtgtactcttacttt 35  Q
    |||||||||||||||||||||||||||||    
T  41380 tgttataagaggtggtgtactcttacttt 41352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 35
Target Start/End: Complemental strand, 5841580 - 5841552
Alignment:
Q  7 tgttataagaggtggtgtactcttacttt 35  Q
    |||||||||||||||||||||||||||||    
T  5841580 tgttataagaggtggtgtactcttacttt 5841552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 35
Target Start/End: Original strand, 16325740 - 16325768
Alignment:
Q  7 tgttataagaggtggtgtactcttacttt 35  Q
    |||||||||||||||||||||||||||||    
T  16325740 tgttataagaggtggtgtactcttacttt 16325768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 35
Target Start/End: Original strand, 16325807 - 16325835
Alignment:
Q  7 tgttataagaggtggtgtactcttacttt 35  Q
    |||||||||||||||||||||||||||||    
T  16325807 tgttataagaggtggtgtactcttacttt 16325835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 35
Target Start/End: Original strand, 16325874 - 16325902
Alignment:
Q  7 tgttataagaggtggtgtactcttacttt 35  Q
    |||||||||||||||||||||||||||||    
T  16325874 tgttataagaggtggtgtactcttacttt 16325902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 37
Target Start/End: Original strand, 16840007 - 16840035
Alignment:
Q  9 ttataagaggtggtgtactcttactttgt 37  Q
    |||||||||||||||||||||||||||||    
T  16840007 ttataagaggtggtgtactcttactttgt 16840035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 209; Significance: 1e-114; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 10 - 226
Target Start/End: Complemental strand, 11945167 - 11944951
Alignment:
Q  10 tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatattaca 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11945167 tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatattaca 11945068  T
Q  110 tgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttgtcttctattcatgagcactaaggggatgttaaggagaattattattga 209  Q
    |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11945067 tgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgagcactaaggggatgttaaggagaattattattga 11944968  T
Q  210 gtgtatatgatgatgtc 226  Q
    |||||||||||||||||    
T  11944967 gtgtatatgatgatgtc 11944951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 10 - 226
Target Start/End: Original strand, 43630898 - 43631114
Alignment:
Q  10 tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatattaca 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43630898 tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatattaca 43630997  T
Q  110 tgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttgtcttctattcatgagcactaaggggatgttaaggagaattattattga 209  Q
    |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43630998 tgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgagcactaaggggatgttaaggagaattattattga 43631097  T
Q  210 gtgtatatgatgatgtc 226  Q
    |||||||||||||||||    
T  43631098 gtgtatatgatgatgtc 43631114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 14 - 225
Target Start/End: Original strand, 11809859 - 11810078
Alignment:
Q  14 agaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatattacatgag 113  Q
    ||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||     
T  11809859 agaggtggtatactcttacgttggttatgttgatgagtatgacgaggttatgatgatcatctatagtgttgaatgtgaggttgttatgatattacatgat 11809958  T
Q  114 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagtt--------gtcttctattcatgagcactaaggggatgttaaggagaattatta 205  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||||        |||||||||||| ||||| ||||||||||||||| ||||||| ||    
T  11809959 gttacctatgagttgttaaatgtacttgatgagggtcatgttaagttgataagtcgtcttctattcacgagcattaaggggatgttaagaagaattaata 11810058  T
Q  206 ttgagtgtatatgatgatgt 225  Q
    ||||||||||||||||||||    
T  11810059 ttgagtgtatatgatgatgt 11810078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 12 - 137
Target Start/End: Original strand, 636478 - 636596
Alignment:
Q  12 taagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatattacatg 111  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||| |||||||||||||||||||    
T  636478 taagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatct-------tgttgaatgcgatgttgttatgatattacatg 636570  T
Q  112 aggttacctatgagttgttaaatgta 137  Q
    ||||||||||||||||||||||||||    
T  636571 aggttacctatgagttgttaaatgta 636596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 109 - 226
Target Start/End: Original strand, 20032180 - 20032297
Alignment:
Q  109 atgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttgtcttctattcatgagcactaaggggatgttaaggagaattattattg 208  Q
    |||| |||||||||||||||||||||||||| || || |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  20032180 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttgtcttctattcatgagcattaaggggatgttaagaagaattattattg 20032279  T
Q  209 agtgtatatgatgatgtc 226  Q
    |||| ||||| |||||||    
T  20032280 agtgcatatggtgatgtc 20032297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 10 - 68
Target Start/End: Original strand, 20032127 - 20032185
Alignment:
Q  10 tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatg 68  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  20032127 tataagaggtggtgtactcttacgttgtttatgttgatgagtatgatgaggttatgatg 20032185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 79 - 161
Target Start/End: Complemental strand, 29533992 - 29533909
Alignment:
Q  79 gtgttgaatgcgaggttgttatgatattacatgaggttac-ctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||||||||  ||||||||||||||||||||||| ||||  ||||||||||||||||||  ||||||| |||||||||||||||    
T  29533992 gtgttgaatatgaggttgttatgatattacatgatgttaagctatgagttgttaaatgtgtttgatgatggttatgttaagttg 29533909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 22132098 - 22132155
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  22132098 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 22132155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 21406332 - 21406275
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  21406332 attacatgatgttatctaggagttgttaaatgtacttgatgatggttatgttaagttg 21406275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 41801278 - 41801335
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||||||||  ||| ||||||||||||||||||||||||||| |||||||||||||||    
T  41801278 attacatgatattatctatgagttgttaaatgtacttgatgatggttatgttaagttg 41801335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 114 - 161
Target Start/End: Complemental strand, 16370994 - 16370947
Alignment:
Q  114 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  16370994 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 16370947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 157
Target Start/End: Original strand, 20230138 - 20230191
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 157  Q
    ||||||||| |||| |||||||||||||| |||||||||||| |||||||||||    
T  20230138 attacatgatgttatctatgagttgttaagtgtacttgatgatggttatgttaa 20230191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 39245170 - 39245227
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||||||||  ||| ||||||||||||||||||||||||||| | |||||||||||||    
T  39245170 attacatgatattatctatgagttgttaaatgtacttgatgatgtttatgttaagttg 39245227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 39248725 - 39248782
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||||||||  ||| ||||||||||||||||||||||||||| | |||||||||||||    
T  39248725 attacatgatattatctatgagttgttaaatgtacttgatgatgtttatgttaagttg 39248782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 41389664 - 41389721
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||||||||  ||| ||||||||||||||||||||||||||| | |||||||||||||    
T  41389664 attacatgatattatctatgagttgttaaatgtacttgatgatgtttatgttaagttg 41389721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 161
Target Start/End: Complemental strand, 32649130 - 32649089
Alignment:
Q  120 tatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||||||||||||||||||||  ||||||||||||||    
T  32649130 tatgagttgttaaatgtacttgatgattgttatgttaagttg 32649089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 33796112 - 33796055
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||||||    
T  33796112 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaagttg 33796055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 1009341 - 1009288
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 157  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  1009341 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 1009288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 157
Target Start/End: Original strand, 1926795 - 1926848
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 157  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  1926795 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 1926848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 157
Target Start/End: Original strand, 16376815 - 16376868
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 157  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  16376815 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 16376868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 157
Target Start/End: Original strand, 20925809 - 20925862
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 157  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  20925809 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 20925862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 52634347 - 52634294
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 157  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  52634347 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 52634294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 35
Target Start/End: Original strand, 636439 - 636467
Alignment:
Q  7 tgttataagaggtggtgtactcttacttt 35  Q
    |||||||||||||||||||||||||||||    
T  636439 tgttataagaggtggtgtactcttacttt 636467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 201; Significance: 1e-110; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 10 - 226
Target Start/End: Original strand, 37839097 - 37839313
Alignment:
Q  10 tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatattaca 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37839097 tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatattaca 37839196  T
Q  110 tgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttgtcttctattcatgagcactaaggggatgttaaggagaattattattga 209  Q
     |||||||||||  |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37839197 cgaggttacctacaagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgagcactaaggggatgttaaggagaattattattga 37839296  T
Q  210 gtgtatatgatgatgtc 226  Q
    |||||||||||||||||    
T  37839297 gtgtatatgatgatgtc 37839313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 10 - 226
Target Start/End: Original strand, 42597826 - 42598042
Alignment:
Q  10 tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatattaca 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||    
T  42597826 tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttatataatgttgaatgagaggttgttatgatattaca 42597925  T
Q  110 tgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttgtcttctattcatgagcactaaggggatgttaaggagaattattattga 209  Q
     |||||||||||  |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42597926 agaggttacctaaaagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgagcactaaggggatgttaaggagaattattattga 42598025  T
Q  210 gtgtatatgatgatgtc 226  Q
    |||||||||||||||||    
T  42598026 gtgtatatgatgatgtc 42598042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 28385033 - 28384873
Alignment:
Q  1 attgtctgttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttat 100  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||  ||||||||| | |||||||||    
T  28385033 attgtctgttataagaggtggtgtactcttacgttgtttatgttgatgagtatgacgatgttatgatgatcttttatgatgttgaatgtggggttgttat 28384934  T
Q  101 gatattacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  28384933 gatattacatgaggttacctatgagttgttaaatgtacttgatgagggttatgttaagttg 28384873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 631747 - 631804
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  631747 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 631804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 13813832 - 13813889
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  13813832 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 13813889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 13818320 - 13818377
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  13818320 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 13818377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 22634926 - 22634983
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  22634926 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 22634983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 24048384 - 24048441
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  24048384 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 24048441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 10711904 - 10711847
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  10711904 attacatgatgttatctaggagttgttaaatgtacttgatgatggttatgttaagttg 10711847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 10925674 - 10925617
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  10925674 attacatgatgttatctaggagttgttaaatgtacttgatgatggttatgttaagttg 10925617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 12423022 - 12422965
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||| |||| |||||||||||||||||||||||||||  ||||||||||||||    
T  12423022 attacatgatgttatctatgagttgttaaatgtacttgatgatagttatgttaagttg 12422965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 17052445 - 17052502
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||| |||| ||||||||||||||||||||||||||| | |||||||||||||    
T  17052445 attacatgatgttatctatgagttgttaaatgtacttgatgatgattatgttaagttg 17052502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 27532831 - 27532774
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  27532831 attacatgatgttatctaggagttgttaaatgtacttgatgatggttatgttaagttg 27532774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 114 - 161
Target Start/End: Complemental strand, 15533288 - 15533241
Alignment:
Q  114 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  15533288 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 15533241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 114 - 161
Target Start/End: Complemental strand, 36037021 - 36036974
Alignment:
Q  114 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  36037021 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 36036974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 114 - 161
Target Start/End: Original strand, 49549092 - 49549139
Alignment:
Q  114 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  49549092 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 49549139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 104 - 154
Target Start/End: Original strand, 23996966 - 23997016
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgt 154  Q
    ||||||||| |||| ||||||||||||||||||||||||||| ||||||||    
T  23996966 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgt 23997016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 161
Target Start/End: Complemental strand, 30145847 - 30145805
Alignment:
Q  119 ctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  30145847 ctatgagttgttaaatgtacttgatgatggttatgttaagttg 30145805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 15223625 - 15223568
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||||||||  ||| ||||||||||||||||||||||||||| | |||||||||||||    
T  15223625 attacatgatattatctatgagttgttaaatgtacttgatgatgtttatgttaagttg 15223568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 161
Target Start/End: Complemental strand, 18211673 - 18211626
Alignment:
Q  114 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||| ||||||||||||||||||||||||||| ||||||||| |||||    
T  18211673 gttatctatgagttgttaaatgtacttgatgatggttatgttgagttg 18211626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 20158447 - 20158504
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||||||    
T  20158447 attacatgatgatatctatgagttgttaagtgtacttgatgatgcttatgttaagttg 20158504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 20163898 - 20163955
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||||||    
T  20163898 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaagttg 20163955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 157
Target Start/End: Original strand, 4562773 - 4562826
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 157  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  4562773 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 4562826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 157
Target Start/End: Original strand, 5758455 - 5758508
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 157  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  5758455 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 5758508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 9555148 - 9555095
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 157  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  9555148 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 9555095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 12486350 - 12486297
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 157  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  12486350 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 12486297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 157
Target Start/End: Original strand, 14758991 - 14759044
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 157  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  14758991 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 14759044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 157
Target Start/End: Original strand, 14955759 - 14955812
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 157  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  14955759 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 14955812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 17807133 - 17807080
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 157  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  17807133 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 17807080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 20161123 - 20161180
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||| | || |||||||||||||| |||||||||| | | |||||||||||||    
T  20161123 attacatgatgatatctatgagttgttaagtgtacttgataatgtttatgttaagttg 20161180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 25688521 - 25688468
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 157  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  25688521 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 25688468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 33740915 - 33740862
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 157  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  33740915 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 33740862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 38107037 - 38106968
Alignment:
Q  93 gttgttatgat-attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||||| ||||||||| |||  |||||||||||||||| |  ||||||| | |||||||||||||    
T  38107037 gttgttatgatgattacatgatgttgtctatgagttgttaaatatgattgatgatgtttatgttaagttg 38106968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 112
Target Start/End: Original strand, 49548998 - 49549055
Alignment:
Q  55 acgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatattacatga 112  Q
    |||| |||||||||||  | |||||||||||||  |||||||||||||| ||||||||    
T  49548998 acgaagttatgatgattgtttatagtgttgaatatgaggttgttatgatgttacatga 49549055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 189; Significance: 1e-102; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 10 - 226
Target Start/End: Original strand, 44494129 - 44494345
Alignment:
Q  10 tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatattaca 109  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  44494129 tataagaggtggtgtactcttacgttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgtgaggttgttatgatattaca 44494228  T
Q  110 tgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttgtcttctattcatgagcactaaggggatgttaaggagaattattattga 209  Q
    ||| ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  44494229 tgatgttacctatgaattgttaaatgtacttgatgatggttatgttaagttgtcttctattcatgagcactaaggggatgttaagaataattattattga 44494328  T
Q  210 gtgtatatgatgatgtc 226  Q
    |||||||||||||||||    
T  44494329 gtgtatatgatgatgtc 44494345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 9 - 226
Target Start/End: Original strand, 21967897 - 21968122
Alignment:
Q  9 ttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatattac 108  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||    
T  21967897 ttataagaggtggtgtaatcttacattgtttatgttgatgagtatgacgaggttatgatgatcttttatagggttgaatgtgaggttgttatgatattac 21967996  T
Q  109 atgaggttacctatgagttgttaaatgtacttgatgaaggttatgt--------taagttgtcttctattcatgagcactaaggggatgttaaggagaat 200  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||        |||||||||||||||||||||||||||||||||||||||| |||||    
T  21967997 atgatgttacctatgagttgttaaatgtacttgatgagggttatgttaagttgataagttgtcttctattcatgagcactaaggggatgttaagaagaat 21968096  T
Q  201 tattattgagtgtatatgatgatgtc 226  Q
    ||||||||||||||||||||||||||    
T  21968097 tattattgagtgtatatgatgatgtc 21968122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 9 - 226
Target Start/End: Original strand, 21980737 - 21980962
Alignment:
Q  9 ttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatattac 108  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || ||||| |||||||| |||||||||||||||||||    
T  21980737 ttataagaggtggtgtactcttacattgtttatgttgatgagtatgacgaggttatgatgattttttatagggttgaatgtgaggttgttatgatattac 21980836  T
Q  109 atgaggttacctatgagttgttaaatgtacttgatgaaggttatgt--------taagttgtcttctattcatgagcactaaggggatgttaaggagaat 200  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||        |||||||||||||||||||||||||||||||||||||||| |||||    
T  21980837 atgatgttacctatgagttgttaaatgtacttgatgagggttatgttaagttgataagttgtcttctattcatgagcactaaggggatgttaagaagaat 21980936  T
Q  201 tattattgagtgtatatgatgatgtc 226  Q
    ||||||||||||||||||||||||||    
T  21980937 tattattgagtgtatatgatgatgtc 21980962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 9 - 226
Target Start/End: Original strand, 21985720 - 21985945
Alignment:
Q  9 ttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatattac 108  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || ||||| |||||||| |||||||||||||||||||    
T  21985720 ttataagaggtggtgtactcttacattgtttatgttgatgagtatgacgaggttatgatgatattttatagggttgaatgtgaggttgttatgatattac 21985819  T
Q  109 atgaggttacctatgagttgttaaatgtacttgatgaaggttatgt--------taagttgtcttctattcatgagcactaaggggatgttaaggagaat 200  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||        |||||||||||||||||||||||||||||||||||||||| |||||    
T  21985820 atgatgttacctatgagttgttaaatgtacttgatgagggttatgttaagttgataagttgtcttctattcatgagcactaaggggatgttaagaagaat 21985919  T
Q  201 tattattgagtgtatatgatgatgtc 226  Q
    ||||||||||||||||||||||||||    
T  21985920 tattattgagtgtatatgatgatgtc 21985945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 10 - 226
Target Start/End: Original strand, 22009102 - 22009326
Alignment:
Q  10 tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatattaca 109  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||    
T  22009102 tataagaggtggtgtactcttacgttgtttatgttgatgagtatgacgaggttatgatgatcttttatagggttgaatgtgaggttgttatgatattaca 22009201  T
Q  110 tgaggttacctatgagttgttaaatgtacttgatgaaggttatgt--------taagttgtcttctattcatgagcactaaggggatgttaaggagaatt 201  Q
    ||| |||||||||||||||||||||||||||||||| ||||||||        |||||||| ||||||||||||||||||||||||||||||| ||||||    
T  22009202 tgatgttacctatgagttgttaaatgtacttgatgagggttatgttaagttgataagttgtgttctattcatgagcactaaggggatgttaagaagaatt 22009301  T
Q  202 attattgagtgtatatgatgatgtc 226  Q
    |||||| ||||||||||||||||||    
T  22009302 attattaagtgtatatgatgatgtc 22009326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 14 - 226
Target Start/End: Original strand, 11251997 - 11252204
Alignment:
Q  14 agaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatattacatgag 113  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||     ||     
T  11251997 agaggtggtgtactcttacgtggtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgtgaggtggttatgatat-----gat 11252091  T
Q  114 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttgtcttctatt-catgagcactaaggggatgttaaggagaattattattgagtg 212  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  11252092 gttacctatgagttgttaaatgtacttgatga-ggttatgttaagttgtcttctatttcatgagcactaaggggatgttaagaagaattattattgagtg 11252190  T
Q  213 tatatgatgatgtc 226  Q
    ||||||||||||||    
T  11252191 tatatgatgatgtc 11252204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 10 - 226
Target Start/End: Complemental strand, 34950259 - 34950043
Alignment:
Q  10 tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatattaca 109  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||    
T  34950259 tataagaggtggtgtactcttacgttgtttatgttgatgagtatgacgaggttatgatgatcttatatagtgttgaatgtgaggttgttctgatattaca 34950160  T
Q  110 tgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttgtcttctattcatgagcactaaggggatgttaaggagaattattattga 209  Q
    ||| ||||||||||||||||||||||||||||||||   || | |||  || | || | |||||||||||||| ||||||||||| ||||||||||||||    
T  34950159 tgatgttacctatgagttgttaaatgtacttgatgagtttttttttattttttttttttttcatgagcactaatgggatgttaagaagaattattattga 34950060  T
Q  210 gtgtatatgatgatgtc 226  Q
    |||||||||||||||||    
T  34950059 gtgtatatgatgatgtc 34950043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 11774478 - 11774318
Alignment:
Q  1 attgtctgttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttat 100  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||  ||||||||| | |||||||||    
T  11774478 attgtctgttataagaggtggtgtactcttacgttgtttatgttgatgagtatgacgaggttatgatgatcttttatgatgttgaatgtggggttgttat 11774379  T
Q  101 gatattacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  11774378 gatattacatgaggttacccatgagttgttaaatgtacttgatgagggttatgttaagttg 11774318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 8414873 - 8415033
Alignment:
Q  1 attgtctgttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttat 100  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||  |||| |||| | |||||||||    
T  8414873 attgtctgttataagaggtggtgtactcttacgttgtttatgttgatgagtatgacgaggttatgatgatcttttatgatgttaaatgtggggttgttat 8414972  T
Q  101 gatattacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||    
T  8414973 gatattacatgaggttacctatgagttgttaaatgtacttgattagggttattttaagttg 8415033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 9 - 191
Target Start/End: Original strand, 22000688 - 22000873
Alignment:
Q  9 ttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatattac 108  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||      ||| |||||||||||||||||||    
T  22000688 ttataagaggtggtgtactcttacattgtttatgttgatgagtatgactaggttatgatgatcttttatagg-----atgtgaggttgttatgatattac 22000782  T
Q  109 atgaggttacctatgagttgttaaatgtacttgatgaaggttatgt--------taagttgtcttctattcatgagcactaaggggatgtt 191  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||        |||||||||||||||||||||||||||||||||||||    
T  22000783 atgatgttacctatgagttgttaaatgtacttgatgagggttatgttaagttgataagttgtcttctattcatgagcactaaggggatgtt 22000873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 9 - 161
Target Start/End: Complemental strand, 21328740 - 21328588
Alignment:
Q  9 ttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatattac 108  Q
    |||||||||||||||||||||||| || ||||||||||||| |||||||| |||||||||||  | |||||||||||||| |||||||||||||| ||||    
T  21328740 ttataagaggtggtgtactcttacgttttttatgttgatgattatgacgatgttatgatgattgtttatagtgttgaatgtgaggttgttatgatgttac 21328641  T
Q  109 atgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||| |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  21328640 atgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 21328588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 9 - 161
Target Start/End: Original strand, 42560786 - 42560938
Alignment:
Q  9 ttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatattac 108  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||| | |||||||||  | |||||||||||||| |||| |||| |||| ||||    
T  42560786 ttataagaggtggtgtactcttacgttgtttatgttgatgattatgacgatgctatgatgattgtttatagtgttgaatgagaggctgttttgatgttac 42560885  T
Q  109 atgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||| |||| |||||||||||||||||||| |||||  |||||||||||||||    
T  42560886 atgatgttatctatgagttgttaaatgtacgtgatggtggttatgttaagttg 42560938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 155 - 226
Target Start/End: Original strand, 42561025 - 42561096
Alignment:
Q  155 taagttgtcttctattcatgagcactaaggggatgttaaggagaattattattgagtgtatatgatgatgtc 226  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||| || ||||||||||    
T  42561025 taagttgtcttctattcatgagtactaaggggatgttaagaagaattattattgggtggatttgatgatgtc 42561096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 21386238 - 21386181
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  21386238 attacatgatgttatctaggagttgttaaatgtacttgatgatggttatgttaagttg 21386181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 23427905 - 23427848
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||| |||| |||||||||||||||||||||| |||| |||||||||||||||    
T  23427905 attacatgatgttatctatgagttgttaaatgtacttaatgatggttatgttaagttg 23427848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 23913344 - 23913287
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||| |||| |||| |||||||||||||||||||||| |||||||||||||||    
T  23913344 attacatgatgttatctataagttgttaaatgtacttgatgatggttatgttaagttg 23913287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 157
Target Start/End: Original strand, 44385833 - 44385886
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 157  Q
    ||||||||| |||| ||||||||||||||||||||||||||| | |||||||||    
T  44385833 attacatgatgttatctatgagttgttaaatgtacttgatgatgattatgttaa 44385886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 187 - 226
Target Start/End: Original strand, 22003050 - 22003089
Alignment:
Q  187 atgttaaggagaattattattgagtgtatatgatgatgtc 226  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  22003050 atgttaagaagaattattattgagtgtatatgatgatgtc 22003089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 14399092 - 14399149
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||||||    
T  14399092 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaagttg 14399149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 21409980 - 21409927
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 157  Q
    ||||||||| | || |||||||||||||| |||||||||||| |||||||||||    
T  21409980 attacatgatgatatctatgagttgttaagtgtacttgatgatggttatgttaa 21409927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 21804472 - 21804419
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 157  Q
    ||||||||| | || |||||||||||||| |||||||||||| |||||||||||    
T  21804472 attacatgatgatatctatgagttgttaagtgtacttgatgatggttatgttaa 21804419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 160
Target Start/End: Original strand, 27942700 - 27942741
Alignment:
Q  119 ctatgagttgttaaatgtacttgatgaaggttatgttaagtt 160  Q
    ||||||||||||||||||||||||||| ||||||| ||||||    
T  27942700 ctatgagttgttaaatgtacttgatgatggttatgataagtt 27942741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 38
Target Start/End: Original strand, 21967862 - 21967891
Alignment:
Q  9 ttataagaggtggtgtactcttactttgtt 38  Q
    ||||||||||||||||||||||||||||||    
T  21967862 ttataagaggtggtgtactcttactttgtt 21967891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 157
Target Start/End: Original strand, 21974183 - 21974236
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 157  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  21974183 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 21974236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 38
Target Start/End: Original strand, 21980702 - 21980731
Alignment:
Q  9 ttataagaggtggtgtactcttactttgtt 38  Q
    ||||||||||||||||||||||||||||||    
T  21980702 ttataagaggtggtgtactcttactttgtt 21980731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 38
Target Start/End: Original strand, 21985685 - 21985714
Alignment:
Q  9 ttataagaggtggtgtactcttactttgtt 38  Q
    ||||||||||||||||||||||||||||||    
T  21985685 ttataagaggtggtgtactcttactttgtt 21985714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 38
Target Start/End: Original strand, 22000653 - 22000682
Alignment:
Q  9 ttataagaggtggtgtactcttactttgtt 38  Q
    ||||||||||||||||||||||||||||||    
T  22000653 ttataagaggtggtgtactcttactttgtt 22000682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 38
Target Start/End: Original strand, 22009066 - 22009095
Alignment:
Q  9 ttataagaggtggtgtactcttactttgtt 38  Q
    ||||||||||||||||||||||||||||||    
T  22009066 ttataagaggtggtgtactcttactttgtt 22009095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 43250281 - 43250228
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 157  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  43250281 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 43250228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 35
Target Start/End: Original strand, 8414809 - 8414837
Alignment:
Q  7 tgttataagaggtggtgtactcttacttt 35  Q
    |||||||||||||||||||||||||||||    
T  8414809 tgttataagaggtggtgtactcttacttt 8414837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 35
Target Start/End: Complemental strand, 11774542 - 11774514
Alignment:
Q  7 tgttataagaggtggtgtactcttacttt 35  Q
    |||||||||||||||||||||||||||||    
T  11774542 tgttataagaggtggtgtactcttacttt 11774514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 35
Target Start/End: Complemental strand, 11774609 - 11774581
Alignment:
Q  7 tgttataagaggtggtgtactcttacttt 35  Q
    |||||||||||||||||||||||||||||    
T  11774609 tgttataagaggtggtgtactcttacttt 11774581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 37
Target Start/End: Complemental strand, 16197722 - 16197694
Alignment:
Q  9 ttataagaggtggtgtactcttactttgt 37  Q
    |||||||||||||||||||||||||||||    
T  16197722 ttataagaggtggtgtactcttactttgt 16197694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 37
Target Start/End: Complemental strand, 16197756 - 16197728
Alignment:
Q  9 ttataagaggtggtgtactcttactttgt 37  Q
    |||||||||||||||||||||||||||||    
T  16197756 ttataagaggtggtgtactcttactttgt 16197728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 37
Target Start/End: Complemental strand, 21328773 - 21328745
Alignment:
Q  9 ttataagaggtggtgtactcttactttgt 37  Q
    |||||||||||||||||||||||||||||    
T  21328773 ttataagaggtggtgtactcttactttgt 21328745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 37
Target Start/End: Complemental strand, 21328807 - 21328779
Alignment:
Q  9 ttataagaggtggtgtactcttactttgt 37  Q
    |||||||||||||||||||||||||||||    
T  21328807 ttataagaggtggtgtactcttactttgt 21328779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 37
Target Start/End: Complemental strand, 21328841 - 21328813
Alignment:
Q  9 ttataagaggtggtgtactcttactttgt 37  Q
    |||||||||||||||||||||||||||||    
T  21328841 ttataagaggtggtgtactcttactttgt 21328813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 21978293 - 21978345
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgtta 156  Q
    ||||||||| | || |||||||||||||| |||||||||||| | ||||||||    
T  21978293 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgtta 21978345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 37
Target Start/End: Original strand, 21980534 - 21980562
Alignment:
Q  9 ttataagaggtggtgtactcttactttgt 37  Q
    |||||||||||||||||||||||||||||    
T  21980534 ttataagaggtggtgtactcttactttgt 21980562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 37
Target Start/End: Original strand, 21985517 - 21985545
Alignment:
Q  9 ttataagaggtggtgtactcttactttgt 37  Q
    |||||||||||||||||||||||||||||    
T  21985517 ttataagaggtggtgtactcttactttgt 21985545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 37
Target Start/End: Original strand, 22000552 - 22000580
Alignment:
Q  9 ttataagaggtggtgtactcttactttgt 37  Q
    |||||||||||||||||||||||||||||    
T  22000552 ttataagaggtggtgtactcttactttgt 22000580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 37
Target Start/End: Original strand, 22005531 - 22005559
Alignment:
Q  9 ttataagaggtggtgtactcttactttgt 37  Q
    |||||||||||||||||||||||||||||    
T  22005531 ttataagaggtggtgtactcttactttgt 22005559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 189; Significance: 1e-102; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 10 - 226
Target Start/End: Original strand, 11394784 - 11395000
Alignment:
Q  10 tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatattaca 109  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11394784 tataagaggtggtgtactcttacgttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatattaca 11394883  T
Q  110 tgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttgtcttctattcatgagcactaaggggatgttaaggagaattattattga 209  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| | |||||||||||||||||||||||    
T  11394884 tgaggttacctatgagttgttaaatgtacttgatgagggttatgttaagttgacttctattcatgagcactaagagaatgttaaggagaattattattga 11394983  T
Q  210 gtgtatatgatgatgtc 226  Q
     ||||| ||||||||||    
T  11394984 atgtatctgatgatgtc 11395000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 14 - 225
Target Start/End: Complemental strand, 16185693 - 16185474
Alignment:
Q  14 agaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatattacatgag 113  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||     
T  16185693 agaggtggtgtactcttacgttggttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgtgaggttgttatgatattacatgat 16185594  T
Q  114 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagtt--------gtcttctattcatgagcactaaggggatgttaaggagaattatta 205  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||||        |||||||||||||||||||||||||||||||||| ||||||| ||    
T  16185593 gttacctatgagttgttaaatgtacttgatgagggtcatgttaagttgataagtcgtcttctattcatgagcactaaggggatgttaagaagaattaata 16185494  T
Q  206 ttgagtgtatatgatgatgt 225  Q
    ||||||||||||||||||||    
T  16185493 ttgagtgtatatgatgatgt 16185474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 41283827 - 41283667
Alignment:
Q  1 attgtctgttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttat 100  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||  ||||||||| | |||||||||    
T  41283827 attgtctgttataagaggtggtgtactcttacgttgtttatgttgatgagtatgacgaggttatgatgatcttttatgatgttgaatgtggggttgttat 41283728  T
Q  101 gatattacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  41283727 gatattacatgaggttacctatgagttgttaaatgtacttgatgagggttatgttaagttg 41283667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 161
Target Start/End: Complemental strand, 15213222 - 15213070
Alignment:
Q  9 ttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatattac 108  Q
    |||||||||||||||||||||||| |||||||||||||||| ||| |||| |||||||||||  | |||||||||||||| |||| |||| |||| ||||    
T  15213222 ttataagaggtggtgtactcttacgttgtttatgttgatgattatcacgatgttatgatgattgtttatagtgttgaatgagaggctgttttgatgttac 15213123  T
Q  109 atgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||| |||| | ||||||||||||||||||||||||| |||||||||||||||    
T  15213122 atgatgttatccatgagttgttaaatgtacttgatgatggttatgttaagttg 15213070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 104 - 177
Target Start/End: Complemental strand, 18301430 - 18301357
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttgtcttctattcatgagc 177  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  18301430 attacatgatgttatctaggagttgttaaatgtacttgatgatggttatgttaagttgtcttctattcatgagc 18301357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 10607320 - 10607377
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  10607320 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 10607377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 11660361 - 11660304
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  11660361 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 11660304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 13891709 - 13891652
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  13891709 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 13891652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 13892092 - 13892035
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  13892092 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 13892035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 20486821 - 20486764
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  20486821 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 20486764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 39268313 - 39268370
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  39268313 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 39268370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 155 - 226
Target Start/End: Complemental strand, 15212983 - 15212912
Alignment:
Q  155 taagttgtcttctattcatgagcactaaggggatgttaaggagaattattattgagtgtatatgatgatgtc 226  Q
    ||||||||| || ||||||||| ||||||||||||||||| ||||||||||||| ||| || ||||||||||    
T  15212983 taagttgtcctcaattcatgagtactaaggggatgttaagaagaattattattgggtggatttgatgatgtc 15212912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 7520215 - 7520272
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||| |||| ||||||||||||||||||||||||||| | |||||||||||||    
T  7520215 attacatgatgttatctatgagttgttaaatgtacttgatgatgattatgttaagttg 7520272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 9752507 - 9752564
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||| |||| ||||||||||||||||||||||| ||| |||||||||||||||    
T  9752507 attacatgatgttatctatgagttgttaaatgtacttggtgatggttatgttaagttg 9752564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 25928371 - 25928428
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||| |||| |||||||||||||||||||||| |||| |||||||||||||||    
T  25928371 attacatgatgttatctatgagttgttaaatgtactttatgatggttatgttaagttg 25928428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 114 - 161
Target Start/End: Complemental strand, 146569 - 146522
Alignment:
Q  114 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  146569 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 146522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 114 - 161
Target Start/End: Complemental strand, 14420856 - 14420809
Alignment:
Q  114 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  14420856 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 14420809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 114 - 161
Target Start/End: Complemental strand, 16005073 - 16005026
Alignment:
Q  114 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  16005073 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 16005026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 114 - 161
Target Start/End: Complemental strand, 18606407 - 18606360
Alignment:
Q  114 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  18606407 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 18606360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 114 - 161
Target Start/End: Complemental strand, 18871366 - 18871319
Alignment:
Q  114 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  18871366 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 18871319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 161
Target Start/End: Original strand, 838148 - 838190
Alignment:
Q  119 ctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  838148 ctatgagttgttaaatgtacttgatgatggttatgttaagttg 838190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 161
Target Start/End: Original strand, 1203328 - 1203370
Alignment:
Q  119 ctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  1203328 ctatgagttgttaaatgtacttgatgatggttatgttaagttg 1203370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 161
Target Start/End: Original strand, 16109990 - 16110032
Alignment:
Q  119 ctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  16109990 ctatgagttgttaaatgtacttgatgatggttatgttaagttg 16110032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 16582500 - 16582443
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||| ||||  |||||||||||||||||||||||||| ||||||| |||||||    
T  16582500 attacatgatgttatttatgagttgttaaatgtacttgatgatggttatgataagttg 16582443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 18424314 - 18424257
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||||||||  ||| ||||||||||||||||||||||||||| | |||||||||||||    
T  18424314 attacatgatattatctatgagttgttaaatgtacttgatgatgtttatgttaagttg 18424257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 26291236 - 26291183
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 157  Q
    ||||||||| |||| |||||||||||||| |||||||||||| |||||||||||    
T  26291236 attacatgatgttatctatgagttgttaagtgtacttgatgatggttatgttaa 26291183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 39721275 - 39721222
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 157  Q
    ||||||||| | || ||||||||||||||||||||||||||| |||||||||||    
T  39721275 attacatgatgatatctatgagttgttaaatgtacttgatgatggttatgttaa 39721222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 161
Target Start/End: Original strand, 10897906 - 10897953
Alignment:
Q  114 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||| |||||||| |||||||||||||||||| |||||||||||||||    
T  10897906 gttatctatgagtcgttaaatgtacttgatgatggttatgttaagttg 10897953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 161
Target Start/End: Original strand, 1860037 - 1860078
Alignment:
Q  120 tatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||||||||||||||||||||||||| | |||||||||||||    
T  1860037 tatgagttgttaaatgtacttgatgacgtttatgttaagttg 1860078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 2833481 - 2833538
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||||||    
T  2833481 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaagttg 2833538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 11394607 - 11394640
Alignment:
Q  1 attgtctgttataagaggtggtgtactcttactt 34  Q
    ||||||||||||||||||||||||||||||||||    
T  11394607 attgtctgttataagaggtggtgtactcttactt 11394640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 161
Target Start/End: Original strand, 13919428 - 13919469
Alignment:
Q  120 tatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||||||||||||||||||||||||| | |||||||||||||    
T  13919428 tatgagttgttaaatgtacttgatgacgtttatgttaagttg 13919469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 15083305 - 15083252
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 157  Q
    ||||||||| | || |||||||||||||| |||||||||||| |||||||||||    
T  15083305 attacatgatgatatctatgagttgttaagtgtacttgatgatggttatgttaa 15083252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 112
Target Start/End: Complemental strand, 13892221 - 13892119
Alignment:
Q  9 ttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatattac 108  Q
    ||||||||||||||||||||| || ||| |||| ||| | | |||||||| ||||||||||   | ||| | |||||||  |||||||||||||| ||||    
T  13892221 ttataagaggtggtgtactctcacattg-ttatattgtttattatgacgatgttatgatgactgtttatggagttgaatatgaggttgttatgatgttac 13892123  T
Q  109 atga 112  Q
    ||||    
T  13892122 atga 13892119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 161
Target Start/End: Original strand, 834060 - 834102
Alignment:
Q  119 ctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||||||||||||| | |||||||||| |||||||||||||||    
T  834060 ctatgagttgttaattctacttgatgatggttatgttaagttg 834102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 161
Target Start/End: Original strand, 1199240 - 1199282
Alignment:
Q  119 ctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||||||||||||| | |||||||||| |||||||||||||||    
T  1199240 ctatgagttgttaattctacttgatgatggttatgttaagttg 1199282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 37
Target Start/End: Complemental strand, 29003806 - 29003776
Alignment:
Q  7 tgttataagaggtggtgtactcttactttgt 37  Q
    |||||||||||||||||||||||||||||||    
T  29003806 tgttataagaggtggtgtactcttactttgt 29003776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 37
Target Start/End: Complemental strand, 34957189 - 34957159
Alignment:
Q  7 tgttataagaggtggtgtactcttactttgt 37  Q
    |||||||||||||||||||||||||||||||    
T  34957189 tgttataagaggtggtgtactcttactttgt 34957159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 31804 - 31751
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 157  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  31804 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 31751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 157
Target Start/End: Original strand, 12706122 - 12706175
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 157  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  12706122 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 12706175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 12713619 - 12713566
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 157  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  12713619 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 12713566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 12722277 - 12722224
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 157  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  12722277 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 12722224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 38
Target Start/End: Complemental strand, 15213426 - 15213397
Alignment:
Q  9 ttataagaggtggtgtactcttactttgtt 38  Q
    ||||||||||||||||||||||||||||||    
T  15213426 ttataagaggtggtgtactcttactttgtt 15213397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 157
Target Start/End: Original strand, 16908509 - 16908562
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 157  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  16908509 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 16908562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 18282037 - 18281984
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 157  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  18282037 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 18281984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 35
Target Start/End: Original strand, 11394543 - 11394571
Alignment:
Q  7 tgttataagaggtggtgtactcttacttt 35  Q
    |||||||||||||||||||||||||||||    
T  11394543 tgttataagaggtggtgtactcttacttt 11394571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 37
Target Start/End: Complemental strand, 15213356 - 15213328
Alignment:
Q  9 ttataagaggtggtgtactcttactttgt 37  Q
    |||||||||||||||||||||||||||||    
T  15213356 ttataagaggtggtgtactcttactttgt 15213328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 37
Target Start/End: Original strand, 16251547 - 16251575
Alignment:
Q  9 ttataagaggtggtgtactcttactttgt 37  Q
    |||||||||||||||||||||||||||||    
T  16251547 ttataagaggtggtgtactcttactttgt 16251575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 37
Target Start/End: Original strand, 16251744 - 16251772
Alignment:
Q  9 ttataagaggtggtgtactcttactttgt 37  Q
    |||||||||||||||||||||||||||||    
T  16251744 ttataagaggtggtgtactcttactttgt 16251772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 37
Target Start/End: Original strand, 16251810 - 16251838
Alignment:
Q  9 ttataagaggtggtgtactcttactttgt 37  Q
    |||||||||||||||||||||||||||||    
T  16251810 ttataagaggtggtgtactcttactttgt 16251838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 16251909 - 16251969
Alignment:
Q  8 gttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatg 68  Q
    ||||| |||||||||||||||| || |||||||||||| ||| ||||| |  |||||||||    
T  16251909 gttatgagaggtggtgtactctcacgttgtttatgttgttgaatatgaggttgttatgatg 16251969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 37
Target Start/End: Complemental strand, 34957150 - 34957122
Alignment:
Q  9 ttataagaggtggtgtactcttactttgt 37  Q
    |||||||||||||||||||||||||||||    
T  34957150 ttataagaggtggtgtactcttactttgt 34957122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 35
Target Start/End: Complemental strand, 41283891 - 41283863
Alignment:
Q  7 tgttataagaggtggtgtactcttacttt 35  Q
    |||||||||||||||||||||||||||||    
T  41283891 tgttataagaggtggtgtactcttacttt 41283863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 189; Significance: 1e-102; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 10 - 226
Target Start/End: Complemental strand, 28708032 - 28707816
Alignment:
Q  10 tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatattaca 109  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28708032 tataagaggtggtgtactcttacgttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatattaca 28707933  T
Q  110 tgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttgtcttctattcatgagcactaaggggatgttaaggagaattattattga 209  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| | |||||||||||||||||||||||    
T  28707932 tgaggttacctatgagttgttaaatgtacttgatgagggttatgttaagttgacttctattcatgagcactaagagaatgttaaggagaattattattga 28707833  T
Q  210 gtgtatatgatgatgtc 226  Q
     ||||| ||||||||||    
T  28707832 atgtatctgatgatgtc 28707816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 14 - 224
Target Start/End: Original strand, 9622823 - 9623032
Alignment:
Q  14 agaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatattacatgag 113  Q
    ||||||||||||||||||| | |||||||||||||||||||||||| ||||||||||  |||||| ||||||||| |||||||||||||||||||||||     
T  9622823 agaggtggtgtactcttacgtggtttatgttgatgagtatgacgagcttatgatgattctctataatgttgaatgtgaggttgttatgatattacatgat 9622922  T
Q  114 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttgtcttctattcatgagcactaaggggatgttaaggagaattattattgagtgt 213  Q
    ||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  9622923 gttacctatgagttgtt-aatgtacttgatgagggttatgtaaagttgtcttctattcatgagcactaaggggatgttaagaagaattattattgagtgt 9623021  T
Q  214 atatgatgatg 224  Q
    |||||||||||    
T  9623022 atatgatgatg 9623032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 23955551 - 23955391
Alignment:
Q  1 attgtctgttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttat 100  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||  ||||||||| | |||||||||    
T  23955551 attgtctgttataagaggtggtgtactcttacgttgtttatgttgatgagtatgacgaggttatgatgatcttttatgatgttgaatgtggggttgttat 23955452  T
Q  101 gatattacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  23955451 gatattacatgaggttacccatgagttgttaaatgtacttgatgagggttatgttaagttg 23955391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 9 - 161
Target Start/End: Original strand, 34297677 - 34297829
Alignment:
Q  9 ttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatattac 108  Q
    ||||||||||||| |||||||||| |||||||||||||||| |||||||| |||||||||||  | ||||||||||||||  ||| |||| |||| ||||    
T  34297677 ttataagaggtggcgtactcttacgttgtttatgttgatgattatgacgatgttatgatgattgtttatagtgttgaatgaaaggctgttttgatgttac 34297776  T
Q  109 atgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||| |||| ||||||||||||||||||||||| ||| |||||||||||||||    
T  34297777 atgatgttatctatgagttgttaaatgtacttgctgatggttatgttaagttg 34297829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 9 - 161
Target Start/End: Complemental strand, 25738066 - 25737914
Alignment:
Q  9 ttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatattac 108  Q
    ||||||||| || ||||||||||| ||| |||||||||||| ||||||||||||||||||||  | ||||||||||| || |||||| ||||||| ||||    
T  25738066 ttataagagatgatgtactcttacgttggttatgttgatgattatgacgaggttatgatgattgtttatagtgttgagtgtgaggtttttatgatgttac 25737967  T
Q  109 atgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||| |||| |||||||||| |||||||||||||||| | ||||| |||||||    
T  25737966 atgatgttatctatgagttggtaaatgtacttgatgatgattatgctaagttg 25737914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 109 - 212
Target Start/End: Original strand, 14594666 - 14594769
Alignment:
Q  109 atgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttgtcttctattcatgagcactaaggggatgttaaggagaattattattg 208  Q
    |||| |||||||||||||||||||||||||| || || |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  14594666 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttgtcttctattcatgagcattaaggggatgttaagaagaattattattg 14594765  T
Q  209 agtg 212  Q
    ||||    
T  14594766 agtg 14594769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 114 - 212
Target Start/End: Complemental strand, 7429496 - 7429398
Alignment:
Q  114 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttgtcttctattcatgagcactaaggggatgttaaggagaattattattgagtg 212  Q
    |||||||||||||||||||||||||| || |  |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  7429496 gttacctatgagttgttaaatgtactcgaggggggttatgttaagttgtcttctattcatgagcattaaggggatgttaagaagaattattattgagtg 7429398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 155 - 226
Target Start/End: Complemental strand, 1254090 - 1254019
Alignment:
Q  155 taagttgtcttctattcatgagcactaaggggatgttaaggagaattattattgagtgtatatgatgatgtc 226  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||| || ||||||||||    
T  1254090 taagttgtcttctattcatgagtactaaggggatgttaagaagaattattattgggtggatttgatgatgtc 1254019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 10 - 65
Target Start/End: Complemental strand, 7429554 - 7429499
Alignment:
Q  10 tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatg 65  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  7429554 tataagaggtggtgtactcttacgttgtttatgttgatgagtatgatgaggttatg 7429499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 155 - 226
Target Start/End: Original strand, 34297916 - 34297987
Alignment:
Q  155 taagttgtcttctattcatgagcactaaggggatgttaaggagaattattattgagtgtatatgatgatgtc 226  Q
    |||||||||||||||||||||| ||||||| ||||||||| ||||||||||||| ||| || ||||||||||    
T  34297916 taagttgtcttctattcatgagtactaaggcgatgttaagaagaattattattgggtggatttgatgatgtc 34297987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 14594614 - 14594671
Alignment:
Q  11 ataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatg 68  Q
    |||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||    
T  14594614 ataagaggtggtgtactcttacgttgtttatgttgatgagtatgatgagggtatgatg 14594671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 18918580 - 18918637
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  18918580 attacatgatgttatctaggagttgttaaatgtacttgatgatggttatgttaagttg 18918637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 23400757 - 23400704
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 157  Q
    ||||||||| |||| ||||||||||||||||||||||||||| |||||||||||    
T  23400757 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaa 23400704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 23538060 - 23538003
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||| |||  ||||||||||||||||||||||||||| |||||||||||||||    
T  23538060 attacatgatgttgtctatgagttgttaaatgtacttgatgatggttatgttaagttg 23538003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 114 - 161
Target Start/End: Complemental strand, 12941290 - 12941243
Alignment:
Q  114 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  12941290 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 12941243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 152 - 207
Target Start/End: Complemental strand, 25737830 - 25737775
Alignment:
Q  152 tgttaagttgtcttctattcatgagcactaaggggatgttaaggagaattattatt 207  Q
    |||||||||||||||||||||||||  |||||||||||||| | ||||||||||||    
T  25737830 tgttaagttgtcttctattcatgagggctaaggggatgttatgaagaattattatt 25737775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 114 - 161
Target Start/End: Complemental strand, 27222901 - 27222854
Alignment:
Q  114 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  27222901 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 27222854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 161
Target Start/End: Complemental strand, 1254223 - 1254181
Alignment:
Q  119 ctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  1254223 ctatgagttgttaaatgtacttgatgatggttatgttaagttg 1254181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 2076365 - 2076308
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||| |||| ||||||||||||||||||| ||||||| | |||||||||||||    
T  2076365 attacatgatgttatctatgagttgttaaatgtatttgatgatgattatgttaagttg 2076308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 161
Target Start/End: Original strand, 28290904 - 28290951
Alignment:
Q  114 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||| |||| |||||||||||||||||||||| |||||||||||||||    
T  28290904 gttatctataagttgttaaatgtacttgatgatggttatgttaagttg 28290951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 161
Target Start/End: Complemental strand, 4475858 - 4475817
Alignment:
Q  120 tatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||||||||||||||||||||  ||||||||||||||    
T  4475858 tatgagttgttaaatgtacttgatgattgttatgttaagttg 4475817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 16622914 - 16622857
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||||||||  ||| |||||| |||||||||||||||||||| | |||||||||||||    
T  16622914 attacatgatattatctatgaattgttaaatgtacttgatgatgtttatgttaagttg 16622857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 27555618 - 27555561
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||||||    
T  27555618 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaagttg 27555561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 28708209 - 28708176
Alignment:
Q  1 attgtctgttataagaggtggtgtactcttactt 34  Q
    ||||||||||||||||||||||||||||||||||    
T  28708209 attgtctgttataagaggtggtgtactcttactt 28708176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 31479462 - 31479519
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||||||||  ||| ||||||||||||||||||| ||||||| | |||||||||||||    
T  31479462 attacatgatattatctatgagttgttaaatgtatttgatgatgtttatgttaagttg 31479519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 159
Target Start/End: Original strand, 18953483 - 18953538
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagt 159  Q
    ||||||||| || | ||| ||||||||||||||||||||||| | |||||||||||    
T  18953483 attacatgatgtcatctaggagttgttaaatgtacttgatgatgattatgttaagt 18953538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 161
Target Start/End: Original strand, 22075405 - 22075447
Alignment:
Q  119 ctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||||||||||||| |||||||||||| | |||||||||||||    
T  22075405 ctatgagttgttaagtgtacttgatgatgtttatgttaagttg 22075447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 161
Target Start/End: Original strand, 27416542 - 27416584
Alignment:
Q  119 ctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||||||||||||| |||||||||||| | |||||||||||||    
T  27416542 ctatgagttgttaagtgtacttgatgatgtttatgttaagttg 27416584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 8242491 - 8242438
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 157  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  8242491 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 8242438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 11565480 - 11565427
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 157  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  11565480 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 11565427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 157
Target Start/End: Original strand, 11716940 - 11716993
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 157  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  11716940 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 11716993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 157
Target Start/End: Original strand, 12620333 - 12620386
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 157  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  12620333 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 12620386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 38
Target Start/End: Complemental strand, 25738197 - 25738168
Alignment:
Q  9 ttataagaggtggtgtactcttactttgtt 38  Q
    ||||||||||||||||||||||||||||||    
T  25738197 ttataagaggtggtgtactcttactttgtt 25738168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 35
Target Start/End: Complemental strand, 23955615 - 23955587
Alignment:
Q  7 tgttataagaggtggtgtactcttacttt 35  Q
    |||||||||||||||||||||||||||||    
T  23955615 tgttataagaggtggtgtactcttacttt 23955587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 35
Target Start/End: Complemental strand, 23955682 - 23955654
Alignment:
Q  7 tgttataagaggtggtgtactcttacttt 35  Q
    |||||||||||||||||||||||||||||    
T  23955682 tgttataagaggtggtgtactcttacttt 23955654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 35
Target Start/End: Complemental strand, 28708273 - 28708245
Alignment:
Q  7 tgttataagaggtggtgtactcttacttt 35  Q
    |||||||||||||||||||||||||||||    
T  28708273 tgttataagaggtggtgtactcttacttt 28708245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 37
Target Start/End: Original strand, 34297329 - 34297357
Alignment:
Q  9 ttataagaggtggtgtactcttactttgt 37  Q
    |||||||||||||||||||||||||||||    
T  34297329 ttataagaggtggtgtactcttactttgt 34297357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 37
Target Start/End: Original strand, 34297400 - 34297428
Alignment:
Q  9 ttataagaggtggtgtactcttactttgt 37  Q
    |||||||||||||||||||||||||||||    
T  34297400 ttataagaggtggtgtactcttactttgt 34297428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 37
Target Start/End: Original strand, 34297505 - 34297533
Alignment:
Q  9 ttataagaggtggtgtactcttactttgt 37  Q
    |||||||||||||||||||||||||||||    
T  34297505 ttataagaggtggtgtactcttactttgt 34297533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 37
Target Start/End: Original strand, 34297574 - 34297602
Alignment:
Q  9 ttataagaggtggtgtactcttactttgt 37  Q
    |||||||||||||||||||||||||||||    
T  34297574 ttataagaggtggtgtactcttactttgt 34297602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815 (Bit Score: 165; Significance: 2e-88; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 12 - 192
Target Start/End: Complemental strand, 181 - 1
Alignment:
Q  12 taagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatattacatg 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  181 taagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatattacatg 82  T
Q  112 aggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttgtcttctattcatgagcactaaggggatgtta 192  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||    
T  81 aggttacctttgagttgttaaatgtacttgatgagggttatgttaagctgtcttctattcatgagcactaaggagatgtta 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 147; Significance: 1e-77; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 12 - 226
Target Start/End: Original strand, 173133 - 173338
Alignment:
Q  12 taagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatattacatg 111  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||    
T  173133 taagaggtggtgtactcttacgttgtttatgttgatgagtatgacgaggttatgatgatcttttatagtgttgaatgtgaggttgttatgatattatatg 173232  T
Q  112 aggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttgtcttctattcatgagcactaaggggatgttaaggagaattattattgagt 211  Q
    | ||||||||| |||||||||||||||||||||| |||||||||||         || ||||||||||||||||||||||||| ||||||||||||||||    
T  173233 atgttacctattagttgttaaatgtacttgatgagggttatgttaa---------tactcatgagcactaaggggatgttaagaagaattattattgagt 173323  T
Q  212 gtatatgatgatgtc 226  Q
    |||||||||||||||    
T  173324 gtatatgatgatgtc 173338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 37
Target Start/End: Original strand, 172865 - 172893
Alignment:
Q  9 ttataagaggtggtgtactcttactttgt 37  Q
    |||||||||||||||||||||||||||||    
T  172865 ttataagaggtggtgtactcttactttgt 172893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679 (Bit Score: 137; Significance: 1e-71; HSPs: 3)
Name: scaffold0679
Description:

Target: scaffold0679; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 10 - 154
Target Start/End: Original strand, 3171 - 3315
Alignment:
Q  10 tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatattaca 109  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3171 tataagaggtggtgtactcttacgttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatattaca 3270  T
Q  110 tgaggttacctatgagttgttaaatgtacttgatgaaggttatgt 154  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  3271 tgaggttacctatgagttgttaaatgtacttgatgagggttatgt 3315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 2994 - 3027
Alignment:
Q  1 attgtctgttataagaggtggtgtactcttactt 34  Q
    ||||||||||||||||||||||||||||||||||    
T  2994 attgtctgttataagaggtggtgtactcttactt 3027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 35
Target Start/End: Original strand, 2930 - 2958
Alignment:
Q  7 tgttataagaggtggtgtactcttacttt 35  Q
    |||||||||||||||||||||||||||||    
T  2930 tgttataagaggtggtgtactcttacttt 2958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 128; Significance: 3e-66; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 10 - 161
Target Start/End: Complemental strand, 37379209 - 37379058
Alignment:
Q  10 tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatattaca 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  ||||||||| | ||||||||||||||||||    
T  37379209 tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttttatgatgttgaatgtggggttgttatgatattaca 37379110  T
Q  110 tgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  37379109 tgaggttacctatgagttgttaaatgtacttgatgagggttatgttaagttg 37379058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 107 - 161
Target Start/End: Original strand, 21074510 - 21074564
Alignment:
Q  107 acatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  21074510 acatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 21074564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 9784073 - 9784016
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||| |||| |||||||||||| |||||||||||||| |||||||||||||||    
T  9784073 attacatgatgttatctatgagttgtttaatgtacttgatgatggttatgttaagttg 9784016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 114 - 161
Target Start/End: Complemental strand, 6481853 - 6481806
Alignment:
Q  114 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  6481853 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 6481806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 114 - 161
Target Start/End: Complemental strand, 6485320 - 6485273
Alignment:
Q  114 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  6485320 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 6485273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 114 - 161
Target Start/End: Complemental strand, 9240743 - 9240696
Alignment:
Q  114 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  9240743 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 9240696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 114 - 161
Target Start/End: Original strand, 19663567 - 19663614
Alignment:
Q  114 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  19663567 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 19663614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 114 - 161
Target Start/End: Complemental strand, 20260326 - 20260279
Alignment:
Q  114 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  20260326 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 20260279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 22702909 - 22702873
Alignment:
Q  9 ttataagaggtggtgtactcttactttgtttatgttg 45  Q
    |||||||||||||||||||||||| ||||||||||||    
T  22702909 ttataagaggtggtgtactcttacgttgtttatgttg 22702873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 38
Target Start/End: Complemental strand, 22702947 - 22702916
Alignment:
Q  7 tgttataagaggtggtgtactcttactttgtt 38  Q
    ||||||||||||||||||||||||||||||||    
T  22702947 tgttataagaggtggtgtactcttactttgtt 22702916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 38
Target Start/End: Original strand, 18359200 - 18359229
Alignment:
Q  9 ttataagaggtggtgtactcttactttgtt 38  Q
    ||||||||||||||||||||||||||||||    
T  18359200 ttataagaggtggtgtactcttactttgtt 18359229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 157
Target Start/End: Original strand, 24630047 - 24630100
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 157  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  24630047 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 24630100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 24645230 - 24645177
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 157  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  24645230 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 24645177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 24648006 - 24647953
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 157  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  24648006 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 24647953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 157
Target Start/End: Original strand, 27380993 - 27381046
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 157  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  27380993 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 27381046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 157
Target Start/End: Original strand, 27384963 - 27385016
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 157  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  27384963 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 27385016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 27600450 - 27600397
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 157  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  27600450 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 27600397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 157
Target Start/End: Original strand, 30346657 - 30346710
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 157  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  30346657 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 30346710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 100; Significance: 1e-49; HSPs: 8)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 175548 - 175425
Alignment:
Q  1 attgtctgttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttat 100  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||  ||||||||| | |||||||||    
T  175548 attgtctgttataagaggtggtgtactcttacattgtttatgttgatgagtatgacgaggttatgatgatcttttatgatgttgaatgtggggttgttat 175449  T
Q  101 gatattacatgaggttacctatga 124  Q
    ||||||||||||||||||||||||    
T  175448 gatattacatgaggttacctatga 175425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 152 - 226
Target Start/End: Original strand, 163708 - 163782
Alignment:
Q  152 tgttaagttgtcttctattcatgagcactaaggggatgttaaggagaattattattgagtgtatatgatgatgtc 226  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| || ||||||||||    
T  163708 tgttaagttgtcttctattcatgagtactaaggggatgttaagaagaattattattgagtggatttgatgatgtc 163782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 9 - 99
Target Start/End: Original strand, 163504 - 163594
Alignment:
Q  9 ttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgtta 99  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||| ||| ||| |||  | |||||||||||||| ||||||||||    
T  163504 ttataagaggtggtgtactcttacgttgtttatgttgatgattatgacgatgttgtgacgattgtttatagtgttgaatgtgaggttgtta 163594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 8 - 112
Target Start/End: Original strand, 153681 - 153785
Alignment:
Q  8 gttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatatta 107  Q
    ||||| |||||||||||||||| || |||||||||||| | | |||||||| ||||||||||   | ||| |||||||||  |||||||||||||| |||    
T  153681 gttatgagaggtggtgtactctcacgttgtttatgttgtttattatgacgatgttatgatgactgtttatggtgttgaatatgaggttgttatgatgtta 153780  T
Q  108 catga 112  Q
    |||||    
T  153781 catga 153785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 161
Target Start/End: Original strand, 163588 - 163624
Alignment:
Q  125 gttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||||||||||||||| |||||||||||||||    
T  163588 gttgttaaatgtacttgatgagggttatgttaagttg 163624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 37
Target Start/End: Original strand, 153284 - 153312
Alignment:
Q  9 ttataagaggtggtgtactcttactttgt 37  Q
    |||||||||||||||||||||||||||||    
T  153284 ttataagaggtggtgtactcttactttgt 153312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 37
Target Start/End: Original strand, 153350 - 153378
Alignment:
Q  9 ttataagaggtggtgtactcttactttgt 37  Q
    |||||||||||||||||||||||||||||    
T  153350 ttataagaggtggtgtactcttactttgt 153378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 35
Target Start/End: Complemental strand, 175612 - 175584
Alignment:
Q  7 tgttataagaggtggtgtactcttacttt 35  Q
    |||||||||||||||||||||||||||||    
T  175612 tgttataagaggtggtgtactcttacttt 175584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 82; Significance: 7e-39; HSPs: 2)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 109 - 226
Target Start/End: Complemental strand, 34128 - 34011
Alignment:
Q  109 atgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttgtcttctattcatgagcactaaggggatgttaaggagaattattattg 208  Q
    |||| |||||||||||||||||||||||||| || ||  ||||||||| ||||||| ||||||||||||| ||||||||||||||| |||||||||||||    
T  34128 atgatgttacctatgagttgttaaatgtactcgaggagtgttatgttaggttgtctgctattcatgagcattaaggggatgttaagaagaattattattg 34029  T
Q  209 agtgtatatgatgatgtc 226  Q
    ||||||||||||||||||    
T  34028 agtgtatatgatgatgtc 34011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 10 - 68
Target Start/End: Complemental strand, 34181 - 34123
Alignment:
Q  10 tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatg 68  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  34181 tataagaggtggtgtactcttacgttgtttatgttgatgagtatgacgaggttatgatg 34123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2015 (Bit Score: 80; Significance: 1e-37; HSPs: 2)
Name: scaffold2015
Description:

Target: scaffold2015; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 109 - 212
Target Start/End: Original strand, 444 - 547
Alignment:
Q  109 atgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttgtcttctattcatgagcactaaggggatgttaaggagaattattattg 208  Q
    |||| |||||||||||||||||||||||||| || || |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  444 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttgtcttctattcatgagcattaaggggatgttaagaagaattattattg 543  T
Q  209 agtg 212  Q
    ||||    
T  544 agtg 547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2015; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 10 - 68
Target Start/End: Original strand, 391 - 449
Alignment:
Q  10 tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatg 68  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||    
T  391 tataagaggtggtgtactcttacgttgtttatgttgatgagtatgatgagggtatgatg 449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 29 - 161
Target Start/End: Complemental strand, 4275 - 4143
Alignment:
Q  29 ttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatattacatgaggttacctatgagttg 128  Q
    |||| |||||||||||||||| ||||| || |||||||||||  | |||||||||||||| |||| | || |||| |||||||| |||| ||||||||||    
T  4275 ttacgttgtttatgttgatgattatgatgatgttatgatgattgtttatagtgttgaatgagaggcttttttgatgttacatgatgttatctatgagttg 4176  T
Q  129 ttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||||||||||| |||||||||||||||    
T  4175 ttaaatgtacttgatgatggttatgttaagttg 4143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 155 - 226
Target Start/End: Complemental strand, 4056 - 3985
Alignment:
Q  155 taagttgtcttctattcatgagcactaaggggatgttaaggagaattattattgagtgtatatgatgatgtc 226  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||| || ||||||||||    
T  4056 taagttgtcttctattcatgagtactaaggggatgttaagaagaattattattgggtggatttgatgatgtc 3985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 104 - 175
Target Start/End: Original strand, 21339 - 21410
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttgtcttctattcatga 175  Q
    ||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  21339 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttgtcttttattcatga 21410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 208716 - 208655
Alignment:
Q  9 ttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgat 70  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  208716 ttataagaggtggtgtaatcttacattgtttatgttgatgagtatgacgaggttatgatgat 208655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 38
Target Start/End: Complemental strand, 208751 - 208722
Alignment:
Q  9 ttataagaggtggtgtactcttactttgtt 38  Q
    ||||||||||||||||||||||||||||||    
T  208751 ttataagaggtggtgtactcttactttgtt 208722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 6960 - 7017
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  6960 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 7017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 37202 - 37259
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  37202 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 37259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 74331 - 74388
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  74331 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 74388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 106 - 161
Target Start/End: Original strand, 25569 - 25624
Alignment:
Q  106 tacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  25569 tacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 25624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 4053 - 3996
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  4053 attacatgatgttatctaggagttgttaaatgtacttgatgatggttatgttaagttg 3996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 23937 - 23994
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  23937 attacatgatgttatctaggagttgttaaatgtacttgatgatggttatgttaagttg 23994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 6)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 28551 - 28494
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||| |||| |||||||||||||||||||||||||||  ||||||||||||||    
T  28551 attacatgatgttatctatgagttgttaaatgtacttgatgatcgttatgttaagttg 28494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 34016 - 33959
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||| |||| |||||||||||||||||||||||||||  ||||||||||||||    
T  34016 attacatgatgttatctatgagttgttaaatgtacttgatgatcgttatgttaagttg 33959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 110
Target Start/End: Complemental strand, 28682 - 28580
Alignment:
Q  8 gttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatatta 107  Q
    ||||| ||||||| |||||||| || |||||||||||  ||| |||||||| ||||||||||   | |||  ||||||||  |||||||||||||| |||    
T  28682 gttatgagaggtgatgtactctcacgttgtttatgttattgattatgacgatgttatgatgactgtttatgatgttgaatatgaggttgttatgatgtta 28583  T
Q  108 cat 110  Q
    |||    
T  28582 cat 28580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 110
Target Start/End: Complemental strand, 34147 - 34045
Alignment:
Q  8 gttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatatta 107  Q
    ||||| ||||||| |||||||| || |||||||||||  ||| |||||||| ||||||||||   | |||  ||||||||  |||||||||||||| |||    
T  34147 gttatgagaggtgatgtactctcacgttgtttatgttattgattatgacgatgttatgatgactgtttatgatgttgaatatgaggttgttatgatgtta 34048  T
Q  108 cat 110  Q
    |||    
T  34047 cat 34045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 38
Target Start/End: Complemental strand, 28780 - 28751
Alignment:
Q  9 ttataagaggtggtgtactcttactttgtt 38  Q
    ||||||||||||||||||||||||||||||    
T  28780 ttataagaggtggtgtactcttactttgtt 28751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 38
Target Start/End: Complemental strand, 34245 - 34216
Alignment:
Q  9 ttataagaggtggtgtactcttactttgtt 38  Q
    ||||||||||||||||||||||||||||||    
T  34245 ttataagaggtggtgtactcttactttgtt 34216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 62839 - 62896
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  62839 attacatgatgttatctaggagttgttaaatgtacttgatgatggttatgttaagttg 62896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1427 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold1427
Description:

Target: scaffold1427; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 114 - 161
Target Start/End: Complemental strand, 269 - 222
Alignment:
Q  114 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  269 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0842 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0842
Description:

Target: scaffold0842; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 114 - 161
Target Start/End: Complemental strand, 5311 - 5264
Alignment:
Q  114 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  5311 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 5264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 114 - 161
Target Start/End: Original strand, 10831 - 10878
Alignment:
Q  114 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  10831 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 10878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 104 - 159
Target Start/End: Original strand, 37197 - 37252
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagt 159  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||    
T  37197 attacatgatgttatctaggagttgttaaatgtacttgatgatggttatgttaagt 37252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 114 - 161
Target Start/End: Complemental strand, 109670 - 109623
Alignment:
Q  114 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  109670 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 109623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 114 - 161
Target Start/End: Original strand, 224152 - 224199
Alignment:
Q  114 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  224152 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 224199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 8739 - 8796
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||| |||| ||| |||||||||||||||| |||||| |||||||||||||||    
T  8739 attacatgatgttatctacgagttgttaaatgtacatgatgatggttatgttaagttg 8796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 161
Target Start/End: Complemental strand, 18892 - 18845
Alignment:
Q  114 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||| |||| |||||||||||||||||||||| |||||||||||||||    
T  18892 gttatctataagttgttaaatgtacttgatgatggttatgttaagttg 18845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 161
Target Start/End: Original strand, 3532 - 3573
Alignment:
Q  120 tatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||||||||||||||||||||  ||||||||||||||    
T  3532 tatgagttgttaaatgtacttgatgattgttatgttaagttg 3573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0410 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 14923 - 14866
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||||||    
T  14923 attacatgaagatatctatgagttgttaagtgtacttgatgatgtttatgttaagttg 14866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0486 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0486
Description:

Target: scaffold0486; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 160
Target Start/End: Complemental strand, 8656 - 8600
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagtt 160  Q
    ||||||||| | || |||||||||||||| |||||||||||| | ||||||||||||    
T  8656 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaagtt 8600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 38
Target Start/End: Complemental strand, 48176 - 48145
Alignment:
Q  7 tgttataagaggtggtgtactcttactttgtt 38  Q
    ||||||||||||||||||||||||||||||||    
T  48176 tgttataagaggtggtgtactcttactttgtt 48145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1852 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1852
Description:

Target: scaffold1852; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 161
Target Start/End: Original strand, 835 - 877
Alignment:
Q  119 ctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||||||||||||| |||||||||||| | |||||||||||||    
T  835 ctatgagttgttaagtgtacttgatgatgtttatgttaagttg 877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 161
Target Start/End: Complemental strand, 10827 - 10789
Alignment:
Q  123 gagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||||||||| |||||||||||| |||||||||||||||    
T  10827 gagttgttaagtgtacttgatgatggttatgttaagttg 10789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 161
Target Start/End: Complemental strand, 11841 - 11799
Alignment:
Q  119 ctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||||||||||||| |||||||||||| | |||||||||||||    
T  11841 ctatgagttgttaagtgtacttgatgatgcttatgttaagttg 11799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 161
Target Start/End: Complemental strand, 70819 - 70777
Alignment:
Q  119 ctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    |||||||||||||| |||||||||||| | |||||||||||||    
T  70819 ctatgagttgttaagtgtacttgatgatgtttatgttaagttg 70777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 157
Target Start/End: Original strand, 6320 - 6373
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 157  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  6320 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 6373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 11130 - 11077
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 157  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  11130 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 11077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 161
Target Start/End: Complemental strand, 5888 - 5847
Alignment:
Q  120 tatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||||||| |||||||||||| | |||||||||||||    
T  5888 tatgagttgttaagtgtacttgatgatgtttatgttaagttg 5847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 11059 - 11116
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 161  Q
    ||||||||| | || |||||||||||||| ||||| |||||| | |||||||||||||    
T  11059 attacatgatgatatctatgagttgttaagtgtacctgatgatgtttatgttaagttg 11116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 157
Target Start/End: Original strand, 34127 - 34180
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 157  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  34127 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 34180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 157
Target Start/End: Original strand, 60325 - 60378
Alignment:
Q  104 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 157  Q
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T  60325 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 60378  T

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