View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1684_low_1 (Length: 478)
Name: NF1684_low_1
Description: NF1684
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1684_low_1 |
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Alignment Details
Target: chr7 (Bit Score: 337; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 337; E-Value: 0
Query Start/End: Original strand, 25 - 460
Target Start/End: Original strand, 7127583 - 7128032
Alignment:
| Q |
25 |
tcttttcaataacatcatgatgatcagtgtcaatcttgttgaaattcagggacagcgacgaagaagttgcagtggcaacaattgtagaatccacaagatc |
124 |
Q |
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| T |
7127583 |
tcttttcaataacatcatgatgatcagtgtcaatctcgttgaaattcagggacagcgacgaagaagttgcagtggctacaattgcagaatccacaagatc |
7127682 |
T |
|
| Q |
125 |
aacatcaacactgtgattttcagagaactctaattgttcttgacacgttgtatccgacacgtgtgaaggctcgtgtgtgagattatcagggcgtgtgaag |
224 |
Q |
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|||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7127683 |
aacatcaacactgtgattttcagagaacactaattgttcttgacacgttgtatccaacacgtgtgaaggctcgtgtgtgagattatcagggcgtgtgaag |
7127782 |
T |
|
| Q |
225 |
tttaactgaagtagggtccgttgtgtgagttttcgtttcgttccacttcgtttaggttcagagagacacgaatctgaaaaattgaaatgaaaa------t |
318 |
Q |
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| T |
7127783 |
tttaactgaagtagggtccgttgtgtgagttttcgtttcgttccacttcgtttaggttcagagagacacgaatctgaaaaattgaaatgaaaatgaaatt |
7127882 |
T |
|
| Q |
319 |
tacaaattaatttgaaatgtatg------------tatcagacacgtgtgaattatgtgattttctcaaattattgagtgtcaatgtatctgagtggtct |
406 |
Q |
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||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| |
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| T |
7127883 |
tacaaattaatttgaaatgtatgtccagtgtctgatatctgacacgtgtgaattatgtcattttctcaaattattaagtgtcaatgtatctgagtggtct |
7127982 |
T |
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| Q |
407 |
agtgtctgtccatttattgacaccagacacatatcagataccagacacaccttc |
460 |
Q |
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| T |
7127983 |
ag----tgtccatttattgacatcagacacatatcagataccagacacaccttc |
7128032 |
T |
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