View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16851_low_4 (Length: 352)
Name: NF16851_low_4
Description: NF16851
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16851_low_4 |
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Alignment Details
Target: chr8 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 1 - 337
Target Start/End: Complemental strand, 9516569 - 9516233
Alignment:
| Q |
1 |
accaccaccaccggtgatattaacgaacaaacgtagatcacgtttgccgttgtattctatttcagcggacatggttgtgatatgatgaagataactgctg |
100 |
Q |
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| T |
9516569 |
accaccaccgccggtgatattaacgaacaaacgtaaatcacgttttccgttgtattctatttcagcggacatggtggtaatatgatgaagataactactt |
9516470 |
T |
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| Q |
101 |
agtattcttcttttatcggtttttctgattttgagaacaaatgcaccggtttgatttggttcggnnnnnnnatagaaccaataaacagtggcaccgagga |
200 |
Q |
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| T |
9516469 |
aatattcttcgtttatcggtttttctgatcttgatcacaaatgcaccggtttgatttggttcggtttttgtatagaaccaataaaccgtagcaccgagaa |
9516370 |
T |
|
| Q |
201 |
acctgtcttcgatgatttgatcggaatctagagttaaaacgatgtcgttttgattatttccggtaatgagattggtgaagtcggaatcttcaagagaagg |
300 |
Q |
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| T |
9516369 |
acctgtcttcgatgatttgatctgagtctagggttaaaacgatgtcgttttgattatttccggtaatgagattggtgaagtcggaatcttcaagagaagg |
9516270 |
T |
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| Q |
301 |
aagagaatgtaaataaagcgaaactttacgatagaac |
337 |
Q |
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| T |
9516269 |
aagagaatgtaaataaagcgaaactttacgatagaac |
9516233 |
T |
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