View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16853_high_8 (Length: 353)
Name: NF16853_high_8
Description: NF16853
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16853_high_8 |
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Alignment Details
Target: chr3 (Bit Score: 315; Significance: 1e-177; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 315; E-Value: 1e-177
Query Start/End: Original strand, 1 - 335
Target Start/End: Complemental strand, 32259457 - 32259123
Alignment:
| Q |
1 |
aagaaagtaaagagtttgagagaggacgacaataacgatgatttggaacaatgttgccggaagagtgaaatcaaatggattatctccagaaaaaatgcca |
100 |
Q |
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| T |
32259457 |
aagaaagtaaagagtttgagagaggacgacaataatgatgatttggaacaatgttgccggaagagtgaaatcgaatggattatctccagaaaaaatgcca |
32259358 |
T |
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| Q |
101 |
taagagccaacatttctatcattttttacacaaattttcaacaccccctgggaattaaatgaaagtgagacatttccgttgcctcgtaaggtctcctcca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32259357 |
taagagccaacatttctatcattttttacacaaattttcaacaccccctgggaattaaatgaaagtgagacatttccgttgcctcgtaaggtctcctcca |
32259258 |
T |
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| Q |
201 |
ttgatagatcaatatcaaaccaattaattaaatgtttgcttggatttgcaatgcgaccatatgaataacatagttaatttaccatcgtgtttccaaacac |
300 |
Q |
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||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32259257 |
ttgatagatcaatatcaaaccaattaattaaatgtgtgcttggatttgtgatgcgaccatatgaataacatagttaatttaccatcgtgtttccaaacac |
32259158 |
T |
|
| Q |
301 |
attaaatgacgattgtgaataactaatgtggttca |
335 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
32259157 |
attaaatgacgattgtgaataactaatgtggttca |
32259123 |
T |
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