View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16853_low_18 (Length: 333)

Name: NF16853_low_18
Description: NF16853
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16853_low_18
NF16853_low_18
[»] chr7 (39 HSPs)
chr7 (19-323)||(6465668-6465977)
chr7 (267-323)||(12006795-12006851)
chr7 (267-323)||(28218418-28218474)
chr7 (267-323)||(41600213-41600269)
chr7 (231-313)||(16995230-16995312)
chr7 (267-321)||(38879981-38880035)
chr7 (231-323)||(48672534-48672627)
chr7 (267-323)||(20419791-20419847)
chr7 (283-323)||(23704744-23704784)
chr7 (267-323)||(25772586-25772642)
chr7 (267-323)||(1250461-1250517)
chr7 (267-323)||(10409441-10409497)
chr7 (283-319)||(20458950-20458986)
chr7 (267-323)||(23383755-23383811)
chr7 (231-315)||(23704924-23705008)
chr7 (267-315)||(24195059-24195107)
chr7 (267-315)||(28218246-28218294)
chr7 (269-323)||(31851494-31851548)
chr7 (267-323)||(7658038-7658094)
chr7 (283-323)||(7658224-7658264)
chr7 (283-315)||(20458774-20458806)
chr7 (231-323)||(20963750-20963841)
chr7 (267-315)||(25772430-25772478)
chr7 (267-315)||(38879791-38879839)
chr7 (283-315)||(44816918-44816950)
chr7 (283-323)||(48648484-48648524)
chr7 (269-315)||(12006609-12006655)
chr7 (281-315)||(20458850-20458884)
chr7 (281-315)||(20963654-20963688)
chr7 (281-315)||(25772522-25772556)
chr7 (281-315)||(44816994-44817028)
chr7 (285-322)||(24194980-24195017)
chr7 (266-315)||(41600024-41600073)
chr7 (267-315)||(20419603-20419651)
chr7 (283-315)||(20963578-20963610)
chr7 (283-315)||(23704848-23704880)
chr7 (271-323)||(44817090-44817142)
chr7 (283-319)||(48648416-48648452)
chr7 (283-315)||(48672362-48672394)
[»] chr2 (29 HSPs)
chr2 (231-323)||(19251501-19251593)
chr2 (267-323)||(13254564-13254620)
chr2 (231-319)||(20498777-20498864)
chr2 (267-323)||(26135884-26135940)
chr2 (268-323)||(17850841-17850896)
chr2 (267-321)||(19251727-19251781)
chr2 (266-323)||(39878168-39878225)
chr2 (267-323)||(15106134-15106190)
chr2 (283-323)||(22263446-22263486)
chr2 (283-323)||(23806035-23806075)
chr2 (283-323)||(26236210-26236250)
chr2 (267-323)||(42670974-42671030)
chr2 (283-321)||(13254693-13254731)
chr2 (270-315)||(13284671-13284716)
chr2 (231-315)||(23806215-23806300)
chr2 (269-314)||(42670788-42670833)
chr2 (267-315)||(15106330-15106378)
chr2 (283-323)||(23854921-23854961)
chr2 (267-315)||(26236358-26236406)
chr2 (267-314)||(22263258-22263305)
chr2 (267-306)||(23046774-23046813)
chr2 (283-314)||(26560637-26560668)
chr2 (267-314)||(33290116-33290163)
chr2 (269-323)||(17463160-17463214)
chr2 (267-321)||(20499002-20499056)
chr2 (285-323)||(26560809-26560847)
chr2 (269-315)||(30390528-30390574)
chr2 (281-314)||(33290313-33290346)
chr2 (267-323)||(34548640-34548696)
[»] chr6 (22 HSPs)
chr6 (267-322)||(33637626-33637681)
chr6 (267-323)||(19284196-19284252)
chr6 (231-323)||(32017759-32017851)
chr6 (231-315)||(18500345-18500429)
chr6 (267-314)||(9481446-9481493)
chr6 (267-321)||(9854144-9854198)
chr6 (269-323)||(24732007-24732061)
chr6 (267-323)||(9481249-9481305)
chr6 (267-315)||(33714554-33714602)
chr6 (284-323)||(18500602-18500641)
chr6 (270-323)||(2299564-2299617)
chr6 (282-323)||(30459156-30459197)
chr6 (283-323)||(10321986-10322026)
chr6 (267-315)||(24732201-24732249)
chr6 (267-323)||(26385529-26385585)
chr6 (267-319)||(30618029-30618081)
chr6 (267-321)||(14680949-14681003)
chr6 (267-321)||(17142744-17142798)
chr6 (282-312)||(32017618-32017648)
chr6 (267-315)||(26385345-26385393)
chr6 (283-315)||(26385437-26385469)
chr6 (283-315)||(33714646-33714678)
[»] scaffold0809 (2 HSPs)
scaffold0809 (234-323)||(1444-1533)
scaffold0809 (269-315)||(1673-1719)
[»] chr3 (46 HSPs)
chr3 (231-323)||(43572419-43572512)
chr3 (267-323)||(20853951-20854007)
chr3 (231-314)||(14162135-14162218)
chr3 (269-323)||(11003801-11003855)
chr3 (267-321)||(43572648-43572702)
chr3 (267-323)||(14161938-14161994)
chr3 (267-323)||(16722058-16722114)
chr3 (267-323)||(33372473-33372529)
chr3 (267-323)||(45003563-45003619)
chr3 (267-321)||(4204775-4204829)
chr3 (267-323)||(5800672-5800728)
chr3 (231-323)||(9267230-9267322)
chr3 (267-323)||(14171841-14171897)
chr3 (266-314)||(14262102-14262150)
chr3 (283-323)||(19113020-19113060)
chr3 (283-323)||(21632979-21633019)
chr3 (267-315)||(21633159-21633207)
chr3 (267-323)||(30500296-30500352)
chr3 (231-315)||(36990923-36991007)
chr3 (231-315)||(37016363-37016447)
chr3 (267-323)||(45969982-45970038)
chr3 (267-323)||(49986595-49986651)
chr3 (283-323)||(52552943-52552983)
chr3 (267-314)||(5800869-5800916)
chr3 (231-314)||(30500073-30500155)
chr3 (268-315)||(35995746-35995793)
chr3 (284-323)||(35995933-35995972)
chr3 (267-315)||(9267042-9267090)
chr3 (267-323)||(14262291-14262347)
chr3 (267-323)||(38283617-38283673)
chr3 (267-315)||(49986791-49986838)
chr3 (267-314)||(15328724-15328771)
chr3 (267-314)||(16722255-16722302)
chr3 (268-315)||(32998397-32998444)
chr3 (267-314)||(52552759-52552806)
chr3 (281-315)||(9267134-9267168)
chr3 (281-315)||(21633081-21633115)
chr3 (267-313)||(33372669-33372715)
chr3 (266-323)||(17465622-17465679)
chr3 (267-315)||(14171653-14171701)
chr3 (283-315)||(16722178-16722210)
chr3 (267-319)||(17649269-17649321)
chr3 (267-315)||(20853763-20853811)
chr3 (267-323)||(38283805-38283861)
chr3 (283-323)||(47575527-47575567)
chr3 (283-315)||(49986715-49986747)
[»] chr5 (39 HSPs)
chr5 (231-319)||(17762313-17762401)
chr5 (231-323)||(24074333-24074426)
chr5 (267-323)||(7126172-7126228)
chr5 (283-323)||(14411780-14411820)
chr5 (235-315)||(14411929-14412009)
chr5 (267-323)||(29444873-29444929)
chr5 (267-323)||(41001608-41001664)
chr5 (267-314)||(29445070-29445117)
chr5 (267-321)||(6817189-6817243)
chr5 (267-321)||(20709279-20709333)
chr5 (267-319)||(994005-994057)
chr5 (267-323)||(6817376-6817432)
chr5 (231-323)||(14143932-14144024)
chr5 (267-323)||(18336535-18336591)
chr5 (267-315)||(24837236-24837284)
chr5 (267-323)||(31799895-31799951)
chr5 (267-314)||(24074566-24074613)
chr5 (268-315)||(28070532-28070579)
chr5 (267-314)||(31799707-31799754)
chr5 (269-323)||(4919245-4919299)
chr5 (267-321)||(23979158-23979212)
chr5 (267-315)||(4919057-4919105)
chr5 (267-323)||(20709467-20709523)
chr5 (283-323)||(24650954-24650994)
chr5 (267-323)||(24837424-24837480)
chr5 (267-314)||(7125984-7126031)
chr5 (267-314)||(14144165-14144212)
chr5 (267-314)||(18336720-18336767)
chr5 (267-310)||(24650767-24650810)
chr5 (283-314)||(27159073-27159104)
chr5 (268-315)||(41424584-41424631)
chr5 (281-315)||(993828-993862)
chr5 (285-315)||(17762545-17762575)
chr5 (283-321)||(22571160-22571198)
chr5 (281-315)||(28071760-28071794)
chr5 (283-315)||(18336643-18336675)
chr5 (267-323)||(27159212-27159268)
chr5 (283-315)||(30512370-30512402)
chr5 (283-315)||(30552710-30552742)
[»] chr4 (39 HSPs)
chr4 (267-323)||(9619047-9619103)
chr4 (269-323)||(26252337-26252391)
chr4 (267-323)||(3018079-3018135)
chr4 (267-323)||(7819081-7819137)
chr4 (267-323)||(9516865-9516921)
chr4 (267-323)||(13132196-13132252)
chr4 (267-323)||(38574223-38574279)
chr4 (267-323)||(46046679-46046735)
chr4 (267-321)||(13132008-13132062)
chr4 (269-323)||(31090316-31090370)
chr4 (270-323)||(3273692-3273745)
chr4 (267-315)||(9516677-9516725)
chr4 (231-311)||(12904777-12904857)
chr4 (267-323)||(15640782-15640838)
chr4 (267-323)||(31944017-31944073)
chr4 (283-323)||(34064237-34064277)
chr4 (267-323)||(48580121-48580177)
chr4 (267-314)||(37012774-37012821)
chr4 (231-321)||(3273877-3273967)
chr4 (267-321)||(15640972-15641026)
chr4 (269-323)||(37012962-37013016)
chr4 (267-312)||(9619245-9619290)
chr4 (269-322)||(41947112-41947165)
chr4 (267-323)||(9396766-9396822)
chr4 (267-323)||(18713027-18713083)
chr4 (267-315)||(31090128-31090176)
chr4 (283-315)||(34064065-34064097)
chr4 (283-323)||(35376245-35376285)
chr4 (267-315)||(38574035-38574083)
chr4 (267-309)||(9396968-9397010)
chr4 (267-313)||(26252502-26252548)
chr4 (270-315)||(7819277-7819322)
chr4 (286-323)||(18667375-18667412)
chr4 (283-323)||(4355964-4356004)
chr4 (283-315)||(9516769-9516801)
chr4 (283-315)||(31944137-31944169)
chr4 (283-315)||(35376391-35376423)
chr4 (267-315)||(36888943-36888991)
chr4 (267-315)||(43312276-43312324)
[»] chr1 (40 HSPs)
chr1 (267-323)||(4907217-4907273)
chr1 (231-323)||(18462316-18462408)
chr1 (267-323)||(24467695-24467751)
chr1 (231-319)||(39711103-39711191)
chr1 (267-323)||(52058263-52058319)
chr1 (267-323)||(17606375-17606431)
chr1 (267-314)||(17606572-17606619)
chr1 (267-321)||(24467884-24467938)
chr1 (200-315)||(18342282-18342401)
chr1 (267-323)||(30299298-30299354)
chr1 (283-319)||(33628949-33628985)
chr1 (269-315)||(29696821-29696867)
chr1 (231-312)||(39826312-39826394)
chr1 (283-321)||(52058094-52058132)
chr1 (278-315)||(30299413-30299450)
chr1 (267-315)||(4907029-4907077)
chr1 (267-315)||(8293070-8293118)
chr1 (271-323)||(13229803-13229855)
chr1 (231-323)||(29696595-29696687)
chr1 (267-315)||(30299494-30299542)
chr1 (283-319)||(34749364-34749400)
chr1 (267-315)||(39826117-39826165)
chr1 (283-315)||(39970729-39970761)
chr1 (267-323)||(39970900-39970956)
chr1 (267-323)||(43539414-43539470)
chr1 (267-323)||(48072028-48072084)
chr1 (267-314)||(16294211-16294258)
chr1 (268-315)||(17501993-17502040)
chr1 (283-321)||(7473875-7473913)
chr1 (267-321)||(18462541-18462595)
chr1 (267-321)||(42510081-42510135)
chr1 (283-321)||(42510167-42510205)
chr1 (267-323)||(8292871-8292927)
chr1 (283-315)||(13229918-13229950)
chr1 (267-315)||(33628757-33628805)
chr1 (267-315)||(34749204-34749252)
chr1 (283-315)||(34749296-34749328)
chr1 (267-315)||(39711335-39711383)
chr1 (283-315)||(39970805-39970837)
chr1 (283-315)||(48072148-48072180)
[»] scaffold0185 (1 HSPs)
scaffold0185 (266-323)||(4124-4181)
[»] scaffold0117 (1 HSPs)
scaffold0117 (267-323)||(12237-12293)
[»] chr8 (28 HSPs)
chr8 (267-323)||(7689591-7689646)
chr8 (267-323)||(10108437-10108493)
chr8 (267-323)||(14820361-14820417)
chr8 (267-323)||(17623142-17623198)
chr8 (269-323)||(21148191-21148245)
chr8 (267-323)||(26136752-26136808)
chr8 (267-323)||(30789762-30789818)
chr8 (231-315)||(43851695-43851779)
chr8 (267-314)||(21148004-21148051)
chr8 (269-315)||(26136948-26136994)
chr8 (267-323)||(2583387-2583443)
chr8 (267-315)||(17622955-17623002)
chr8 (283-319)||(42605836-42605872)
chr8 (267-314)||(5555133-5555180)
chr8 (267-314)||(10108634-10108681)
chr8 (267-314)||(14767574-14767621)
chr8 (267-314)||(14820558-14820605)
chr8 (268-315)||(38726755-38726802)
chr8 (268-315)||(40486696-40486743)
chr8 (285-323)||(5554954-5554992)
chr8 (267-321)||(42113051-42113105)
chr8 (285-323)||(42113239-42113277)
chr8 (266-315)||(10171406-10171455)
chr8 (283-315)||(7689786-7689818)
chr8 (283-315)||(17623046-17623078)
chr8 (283-315)||(22494647-22494679)
chr8 (283-315)||(42605940-42605972)
chr8 (283-323)||(43851919-43851959)
[»] scaffold0361 (3 HSPs)
scaffold0361 (267-315)||(4826-4874)
scaffold0361 (283-319)||(4646-4682)
scaffold0361 (283-315)||(4750-4782)
[»] scaffold0352 (2 HSPs)
scaffold0352 (268-314)||(4735-4781)
scaffold0352 (268-315)||(5941-5988)
[»] scaffold0449 (2 HSPs)
scaffold0449 (267-323)||(7454-7510)
scaffold0449 (267-315)||(7293-7341)
[»] scaffold0141 (1 HSPs)
scaffold0141 (267-315)||(8585-8633)
[»] scaffold0881 (1 HSPs)
scaffold0881 (285-315)||(305-335)
[»] scaffold0477 (1 HSPs)
scaffold0477 (266-315)||(5011-5060)
[»] scaffold0176 (1 HSPs)
scaffold0176 (283-323)||(15887-15927)


Alignment Details
Target: chr7 (Bit Score: 242; Significance: 1e-134; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 19 - 323
Target Start/End: Original strand, 6465668 - 6465977
Alignment:
Q  19 aaggataccaagactgactacactgttctaaaactaacaattcattcattttactgttaatgattacattcaacaattcccttttccccaaaaatagaac 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6465668 aaggataccaagactgactacactgttctaaaactaacaattcattcattttactgttaatgattacattcaacaattcccttttccccaaaaatagaac 6465767  T
Q  119 aattcccttcttataacattgacatattctaacaaatttatcgatgactactcatcacaatgaattgatctagattcttttaaaaatggataaatatctt 218  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||    
T  6465768 aattcccttcttataacattgacatattctaacaaatttatcaatgactactcatcacaatgaattgatctagaaccttttaaaaatgggtaaatatctt 6465867  T
Q  219 ttttcgtccatg-----ttagcgaatttcggttttagtccctgtnnnnnnnntatttagattctgttcttgtaatttcagattcttccacttttggtccc 313  Q
    ||||||||||||     |||||||||| ||||||||||||||||        |||||||||| |||||||||||||||||||||||||||||||||||||    
T  6465868 ttttcgtccatgtaatattagcgaattccggttttagtccctgtaaaaaaaatatttagattatgttcttgtaatttcagattcttccacttttggtccc 6465967  T
Q  314 tcctttcatc 323  Q
    ||||||||||    
T  6465968 tcctttcatc 6465977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 267 - 323
Target Start/End: Complemental strand, 12006851 - 12006795
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||    
T  12006851 atttagattttgtccctgtaatttcagattcttccacttttggtccctcctttcatc 12006795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 267 - 323
Target Start/End: Complemental strand, 28218474 - 28218418
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||    
T  28218474 atttagattttgtccctgtaatttcagattcttccacttttggtccctcctttcatc 28218418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 267 - 323
Target Start/End: Complemental strand, 41600269 - 41600213
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||    
T  41600269 atttagattttgtccctgtaatttcagattcttccacttttggtccctcctttcatc 41600213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 231 - 313
Target Start/End: Original strand, 16995230 - 16995312
Alignment:
Q  231 ttagcgaatttcggttttagtccctgtnnnnnnnntatttagattctgttcttgtaatttcagattcttccacttttggtccc 313  Q
    ||||||||||||||||||||| |||||        |||||||||| ||| | |||||||||||||||||||||||||||||||    
T  16995230 ttagcgaatttcggttttagttcctgtaaaaaaaatatttagattttgtccctgtaatttcagattcttccacttttggtccc 16995312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 267 - 321
Target Start/End: Complemental strand, 38880035 - 38879981
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttca 321  Q
    ||||||||| ||| | |||||||||||||||||||||||||||||||||||||||    
T  38880035 atttagattttgtccctgtaatttcagattcttccacttttggtccctcctttca 38879981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 231 - 323
Target Start/End: Complemental strand, 48672627 - 48672534
Alignment:
Q  231 ttagcgaatttcggttttagtccctgtnnnnnnnnt-atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    |||||||||||||||||||||||||||          ||||||||| | | | |||||||||||||||||||||||||||||||||||||||||    
T  48672627 ttagcgaatttcggttttagtccctgtaaataaaaagatttagattttatccctgtaatttcagattcttccacttttggtccctcctttcatc 48672534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 267 - 323
Target Start/End: Complemental strand, 20419847 - 20419791
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||||| ||| | |||||||||||||||||| ||||||||||||||||||||||    
T  20419847 atttagattttgtccctgtaatttcagattcttctacttttggtccctcctttcatc 20419791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 283 - 323
Target Start/End: Original strand, 23704744 - 23704784
Alignment:
Q  283 tgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  23704744 tgtaatttcagattcttccacttttggtccctcctttcatc 23704784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 267 - 323
Target Start/End: Complemental strand, 25772642 - 25772586
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||||| ||| | |||||||||||||||||| ||||||||||||||||||||||    
T  25772642 atttagattttgtccctgtaatttcagattcttctacttttggtccctcctttcatc 25772586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 267 - 323
Target Start/End: Complemental strand, 1250517 - 1250461
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||||| ||| | | |||||||| ||||||||||||||||||||||||||||||    
T  1250517 atttagattttgtccctttaatttcatattcttccacttttggtccctcctttcatc 1250461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 267 - 323
Target Start/End: Original strand, 10409441 - 10409497
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||||| ||| |||||||||||||||||||| |||||| |||||| ||||||||    
T  10409441 atttagattttgtccttgtaatttcagattcttctacttttagtcccttctttcatc 10409497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 283 - 319
Target Start/End: Complemental strand, 20458986 - 20458950
Alignment:
Q  283 tgtaatttcagattcttccacttttggtccctccttt 319  Q
    |||||||||||||||||||||||||||||||||||||    
T  20458986 tgtaatttcagattcttccacttttggtccctccttt 20458950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 267 - 323
Target Start/End: Complemental strand, 23383811 - 23383755
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||||| ||| | |||||||||| |||||||||| |||||||||||||||||||    
T  23383811 atttagattttgtccctgtaatttcatattcttccacctttggtccctcctttcatc 23383755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 231 - 315
Target Start/End: Complemental strand, 23705008 - 23704924
Alignment:
Q  231 ttagcgaatttcggttttagtccctgtnnnnnnnntatttagattctgttcttgtaatttcagattcttccacttttggtccctc 315  Q
    |||||||||| ||||||||||||||||         ||||||||| ||| | |||||||||| ||||||||||||||||||||||    
T  23705008 ttagcgaattccggttttagtccctgtaaaaaaaagatttagattttgtccctgtaatttcatattcttccacttttggtccctc 23704924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 267 - 315
Target Start/End: Complemental strand, 24195107 - 24195059
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctc 315  Q
    ||||||||| ||| |||||||||||| ||||||||||||||||||||||    
T  24195107 atttagattttgtccttgtaatttcatattcttccacttttggtccctc 24195059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 267 - 315
Target Start/End: Original strand, 28218246 - 28218294
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctc 315  Q
    ||||||||| ||| | |||||||||||||||||||||||||||||||||    
T  28218246 atttagattttgtccctgtaatttcagattcttccacttttggtccctc 28218294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 269 - 323
Target Start/End: Complemental strand, 31851548 - 31851494
Alignment:
Q  269 ttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||| ||| | |||||||||| |||||||||||||||||| |||||||||||    
T  31851548 ttagattttgtccctgtaatttcatattcttccacttttggtctctcctttcatc 31851494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 323
Target Start/End: Original strand, 7658038 - 7658094
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||||| ||| | |||||||||| |||||| |||||||||||| ||||||||||    
T  7658038 atttagattatgtccatgtaatttcaaattcttacacttttggtccatcctttcatc 7658094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 323
Target Start/End: Complemental strand, 7658264 - 7658224
Alignment:
Q  283 tgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    |||||||| |||||||||||||||||||| |||||||||||    
T  7658264 tgtaatttaagattcttccacttttggtctctcctttcatc 7658224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 20458774 - 20458806
Alignment:
Q  283 tgtaatttcagattcttccacttttggtccctc 315  Q
    |||||||||||||||||||||||||||||||||    
T  20458774 tgtaatttcagattcttccacttttggtccctc 20458806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 323
Target Start/End: Complemental strand, 20963841 - 20963750
Alignment:
Q  231 ttagcgaatttcggttttagtccctgtnnnnnnnntatttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    |||||||||| ||||||||||||||||         |||||||||  || | ||||||||||||||||| |||||||||| ||||||||||||    
T  20963841 ttagcgaattccggttttagtccctgtaaaaataaaatttagatttagtccctgtaatttcagattctttcacttttggt-cctcctttcatc 20963750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 315
Target Start/End: Original strand, 25772430 - 25772478
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctc 315  Q
    ||||||||| ||| |||||||||||| ||||||||||||||| ||||||    
T  25772430 atttagattttgtccttgtaatttcatattcttccacttttgttccctc 25772478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 315
Target Start/End: Original strand, 38879791 - 38879839
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctc 315  Q
    ||||||||| ||| | |||||||||| ||||||||||||||||||||||    
T  38879791 atttagattttgtccctgtaatttcatattcttccacttttggtccctc 38879839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 44816918 - 44816950
Alignment:
Q  283 tgtaatttcagattcttccacttttggtccctc 315  Q
    |||||||||||||||||||||||||||||||||    
T  44816918 tgtaatttcagattcttccacttttggtccctc 44816950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 323
Target Start/End: Complemental strand, 48648524 - 48648484
Alignment:
Q  283 tgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    |||||||| |||||||||||||| |||||||||||||||||    
T  48648524 tgtaattttagattcttccacttctggtccctcctttcatc 48648484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 315
Target Start/End: Original strand, 12006609 - 12006655
Alignment:
Q  269 ttagattctgttcttgtaatttcagattcttccacttttggtccctc 315  Q
    ||||||| ||| | |||||||||||||||||||||||||| ||||||    
T  12006609 ttagattttgtccctgtaatttcagattcttccacttttgatccctc 12006655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 315
Target Start/End: Complemental strand, 20458884 - 20458850
Alignment:
Q  281 cttgtaatttcagattcttccacttttggtccctc 315  Q
    ||||||||||||||||| |||||||||||||||||    
T  20458884 cttgtaatttcagattcctccacttttggtccctc 20458850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 315
Target Start/End: Complemental strand, 20963688 - 20963654
Alignment:
Q  281 cttgtaatttcagattcttccacttttggtccctc 315  Q
    |||||||||||| ||||||||||||||||||||||    
T  20963688 cttgtaatttcatattcttccacttttggtccctc 20963654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 315
Target Start/End: Complemental strand, 25772556 - 25772522
Alignment:
Q  281 cttgtaatttcagattcttccacttttggtccctc 315  Q
    ||||||||||||||||| |||||||||||||||||    
T  25772556 cttgtaatttcagattcctccacttttggtccctc 25772522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 315
Target Start/End: Complemental strand, 44817028 - 44816994
Alignment:
Q  281 cttgtaatttcagattcttccacttttggtccctc 315  Q
    ||||||||||||||||| |||||||||||||||||    
T  44817028 cttgtaatttcagattcctccacttttggtccctc 44816994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 322
Target Start/End: Original strand, 24194980 - 24195017
Alignment:
Q  285 taatttcagattcttccacttttggtccctcctttcat 322  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  24194980 taatttcagattcctccacttttggtccctcatttcat 24195017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 315
Target Start/End: Original strand, 41600024 - 41600073
Alignment:
Q  266 tatttagattctgttcttgtaatttcagattcttccacttttggtccctc 315  Q
    |||||||||| ||| | ||||||||||||||||||||| |||| ||||||    
T  41600024 tatttagattttgtccctgtaatttcagattcttccacatttgatccctc 41600073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 315
Target Start/End: Original strand, 20419603 - 20419651
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctc 315  Q
    ||||||||| ||| | |||||||||| ||||||||| ||||||||||||    
T  20419603 atttagattttgtccctgtaatttcatattcttccatttttggtccctc 20419651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 20963578 - 20963610
Alignment:
Q  283 tgtaatttcagattcttccacttttggtccctc 315  Q
    |||||||| ||||||||||||||||||||||||    
T  20963578 tgtaattttagattcttccacttttggtccctc 20963610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 23704848 - 23704880
Alignment:
Q  283 tgtaatttcagattcttccacttttggtccctc 315  Q
    ||||||||||||||| |||||||||||||||||    
T  23704848 tgtaatttcagattcctccacttttggtccctc 23704880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 323
Target Start/End: Complemental strand, 44817142 - 44817090
Alignment:
Q  271 agattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||| ||| ||| |||||||| |||||| ||||||||||||||| |||||||    
T  44817142 agattttgtccttataatttcatattctttcacttttggtccctcttttcatc 44817090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 319
Target Start/End: Complemental strand, 48648452 - 48648416
Alignment:
Q  283 tgtaatttcagattcttccacttttggtccctccttt 319  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  48648452 tgtaatttcagattcctccaattttggtccctccttt 48648416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 48672362 - 48672394
Alignment:
Q  283 tgtaatttcagattcttccacttttggtccctc 315  Q
    |||||||||||||||||||||||||| ||||||    
T  48672362 tgtaatttcagattcttccacttttgatccctc 48672394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 5e-19; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 231 - 323
Target Start/End: Original strand, 19251501 - 19251593
Alignment:
Q  231 ttagcgaatttcggttttagtccctgtnnnnnnnntatttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    |||||||||||||||||||||||||||         ||||||||| ||| | |||||||||| ||||||||||||||||||||||||||||||    
T  19251501 ttagcgaatttcggttttagtccctgtaaaaaaaagatttagattttgtccctgtaatttcatattcttccacttttggtccctcctttcatc 19251593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 267 - 323
Target Start/End: Original strand, 13254564 - 13254620
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||||| ||| ||||||||||||||||||| |||||||||| ||||||||||||    
T  13254564 atttagattttgtccttgtaatttcagattctttcacttttggttcctcctttcatc 13254620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 231 - 319
Target Start/End: Original strand, 20498777 - 20498864
Alignment:
Q  231 ttagcgaatttcggttttagtccctgtnnnnnnnntatttagattctgttcttgtaatttcagattcttccacttttggtccctccttt 319  Q
    |||||||||| ||||||||||||||||        |||||||||| ||| | |||| ||||||||||||||||||||||||||||||||    
T  20498777 ttagcgaattacggttttagtccctgtaaaaaaaatatttagattatgtccctgta-tttcagattcttccacttttggtccctccttt 20498864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 267 - 323
Target Start/End: Original strand, 26135884 - 26135940
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||||| ||| | |||||||||||||||||| ||||||||||||||||||||||    
T  26135884 atttagattttgtccctgtaatttcagattcttctacttttggtccctcctttcatc 26135940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 268 - 323
Target Start/End: Complemental strand, 17850896 - 17850841
Alignment:
Q  268 tttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    |||||||| ||| | ||||||||||||||||||||||||||||||||| |||||||    
T  17850896 tttagattttgtccctgtaatttcagattcttccacttttggtccctcttttcatc 17850841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 267 - 321
Target Start/End: Complemental strand, 19251781 - 19251727
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttca 321  Q
    ||||||||||||| |||||||||||| ||||||||||||| |||||||| |||||    
T  19251781 atttagattctgtccttgtaatttcatattcttccactttcggtccctcatttca 19251727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 266 - 323
Target Start/End: Original strand, 39878168 - 39878225
Alignment:
Q  266 tatttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    |||||||||| |||   ||||||||||||||||||||||||||||| |||||||||||    
T  39878168 tatttagattatgtatctgtaatttcagattcttccacttttggtcactcctttcatc 39878225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 267 - 323
Target Start/End: Original strand, 15106134 - 15106190
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||||| ||| | |||||||| ||||| ||||||||||||||||||||||||||    
T  15106134 atttagattttgtccctgtaattttagattattccacttttggtccctcctttcatc 15106190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 283 - 323
Target Start/End: Complemental strand, 22263486 - 22263446
Alignment:
Q  283 tgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  22263486 tgtaatttcatattcttccacttttggtccctcctttcatc 22263446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 283 - 323
Target Start/End: Original strand, 23806035 - 23806075
Alignment:
Q  283 tgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  23806035 tgtaattttagattcttccacttttggtccctcctttcatc 23806075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 283 - 323
Target Start/End: Original strand, 26236210 - 26236250
Alignment:
Q  283 tgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  26236210 tgtaatttcagattctttcacttttggtccctcctttcatc 26236250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 267 - 323
Target Start/End: Complemental strand, 42671030 - 42670974
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||||| ||| | |||||||||| ||| ||||||||||||||||||||||||||    
T  42671030 atttagattatgtccctgtaatttcatatttttccacttttggtccctcctttcatc 42670974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 283 - 321
Target Start/End: Complemental strand, 13254731 - 13254693
Alignment:
Q  283 tgtaatttcagattcttccacttttggtccctcctttca 321  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  13254731 tgtaatttcagattcttccacttttggtccctcatttca 13254693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 270 - 315
Target Start/End: Complemental strand, 13284716 - 13284671
Alignment:
Q  270 tagattctgttcttgtaatttcagattcttccacttttggtccctc 315  Q
    |||||| ||| ||||||||||||||||| |||||||||||||||||    
T  13284716 tagattttgtccttgtaatttcagattcctccacttttggtccctc 13284671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 231 - 315
Target Start/End: Complemental strand, 23806300 - 23806215
Alignment:
Q  231 ttagcgaatttcggttttagtccctgtnnnnnnnnt-atttagattctgttcttgtaatttcagattcttccacttttggtccctc 315  Q
    |||||||||||||||||||||||||||          ||||||||| ||| | |||||||||| ||||||||||||||||||||||    
T  23806300 ttagcgaatttcggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttccacttttggtccctc 23806215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 269 - 314
Target Start/End: Original strand, 42670788 - 42670833
Alignment:
Q  269 ttagattctgttcttgtaatttcagattcttccacttttggtccct 314  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||||    
T  42670788 ttagattttgtccttgtaatttcatattcttccacttttggtccct 42670833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 315
Target Start/End: Complemental strand, 15106378 - 15106330
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctc 315  Q
    ||||||||| ||| | |||||||||||||||||||||||||| ||||||    
T  15106378 atttagattttgtccctgtaatttcagattcttccacttttgatccctc 15106330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 323
Target Start/End: Complemental strand, 23854961 - 23854921
Alignment:
Q  283 tgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    |||||||| | ||||||||||||||||||||||||||||||    
T  23854961 tgtaattttatattcttccacttttggtccctcctttcatc 23854921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 315
Target Start/End: Complemental strand, 26236406 - 26236358
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctc 315  Q
    ||||||||| ||| | |||||||||||||||||||| ||||||||||||    
T  26236406 atttagattttgtccctgtaatttcagattcttccatttttggtccctc 26236358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 314
Target Start/End: Original strand, 22263258 - 22263305
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccct 314  Q
    ||||||||| ||| | |||||||||| |||||||||||||||||||||    
T  22263258 atttagattttgtccctgtaatttcatattcttccacttttggtccct 22263305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 306
Target Start/End: Original strand, 23046774 - 23046813
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttt 306  Q
    ||||||||||||| | ||||||||||||||||||||||||    
T  23046774 atttagattctgtccctgtaatttcagattcttccacttt 23046813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 283 - 314
Target Start/End: Original strand, 26560637 - 26560668
Alignment:
Q  283 tgtaatttcagattcttccacttttggtccct 314  Q
    ||||||||||||||||||||||||||||||||    
T  26560637 tgtaatttcagattcttccacttttggtccct 26560668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 314
Target Start/End: Original strand, 33290116 - 33290163
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccct 314  Q
    ||||||||||||| |||||||||||| | || ||||||||||||||||    
T  33290116 atttagattctgtccttgtaatttcatactcctccacttttggtccct 33290163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 323
Target Start/End: Original strand, 17463160 - 17463214
Alignment:
Q  269 ttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||| ||| | ||||||||||| |||| |||||||||||||||| |||||||    
T  17463160 ttagattttgtccctgtaatttcaggttctcccacttttggtccctcatttcatc 17463214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 321
Target Start/End: Complemental strand, 20499056 - 20499002
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttca 321  Q
    ||||||||| ||| | ||||||||||||||||| |||||||||||| || |||||    
T  20499056 atttagattttgtccctgtaatttcagattctttcacttttggtccttcatttca 20499002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 26560847 - 26560809
Alignment:
Q  285 taatttcagattcttccacttttggtccctcctttcatc 323  Q
    |||||||| |||||||||||||||||| |||||||||||    
T  26560847 taatttcatattcttccacttttggtctctcctttcatc 26560809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 315
Target Start/End: Original strand, 30390528 - 30390574
Alignment:
Q  269 ttagattctgttcttgtaatttcagattcttccacttttggtccctc 315  Q
    ||||||| ||| | |||||||||| ||||||||||||||||||||||    
T  30390528 ttagattttgtccctgtaatttcatattcttccacttttggtccctc 30390574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 314
Target Start/End: Complemental strand, 33290346 - 33290313
Alignment:
Q  281 cttgtaatttcagattcttccacttttggtccct 314  Q
    |||||||||||| |||||||||||||||||||||    
T  33290346 cttgtaatttcatattcttccacttttggtccct 33290313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 323
Target Start/End: Original strand, 34548640 - 34548696
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||||| ||| | |||||||||| ||| |||||| ||||||| |||||||||||    
T  34548640 atttagattttgtccatgtaatttcatattgttccacctttggtcactcctttcatc 34548696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 2e-18; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 267 - 322
Target Start/End: Original strand, 33637626 - 33637681
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcat 322  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  33637626 atttagattttgttcttgtaattttagattcttccacttttggtccctcctttcat 33637681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 267 - 323
Target Start/End: Original strand, 19284196 - 19284252
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||    
T  19284196 atttagattttgtccctgtaatttcagattcttccacttttggtccctcctttcatc 19284252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 231 - 323
Target Start/End: Complemental strand, 32017851 - 32017759
Alignment:
Q  231 ttagcgaatttcggttttagtccctgtnnnnnnnntatttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    |||||||||| ||||||||||||||||         ||||||||| ||| | |||||||||| ||||||||||||||||||||||||||||||    
T  32017851 ttagcgaattccggttttagtccctgtaaaaaaaagatttagattttgtccctgtaatttcatattcttccacttttggtccctcctttcatc 32017759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 231 - 315
Target Start/End: Original strand, 18500345 - 18500429
Alignment:
Q  231 ttagcgaatttcggttttagtccctgtnnnnnnnntatttagattctgttcttgtaatttcagattcttccacttttggtccctc 315  Q
    |||||||||||||||||||||||||||         ||||||||| ||| | |||||||||| ||||||||||||||||||||||    
T  18500345 ttagcgaatttcggttttagtccctgtaagaaaaagatttagattttgtccctgtaatttcatattcttccacttttggtccctc 18500429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 267 - 314
Target Start/End: Complemental strand, 9481493 - 9481446
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccct 314  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  9481493 atttagattttgtccttgtaatttcagattcttccacttttggtccct 9481446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 267 - 321
Target Start/End: Complemental strand, 9854198 - 9854144
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttca 321  Q
    ||||||||| ||| |||||||||||| |||||||||||||||||||||| |||||    
T  9854198 atttagattttgtccttgtaatttcatattcttccacttttggtccctcatttca 9854144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 269 - 323
Target Start/End: Original strand, 24732007 - 24732061
Alignment:
Q  269 ttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||| ||| | |||||||||||||||||| ||||||||||||||||||||||    
T  24732007 ttagattttgtccctgtaatttcagattcttctacttttggtccctcctttcatc 24732061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 267 - 323
Target Start/End: Original strand, 9481249 - 9481305
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||||| ||| | |||||||||| ||||||||| ||||||||||||||||||||    
T  9481249 atttagattatgtccctgtaatttcatattcttccaattttggtccctcctttcatc 9481305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 267 - 315
Target Start/End: Original strand, 33714554 - 33714602
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctc 315  Q
    ||||||||| ||| |||||||||||| ||||||||||||||||||||||    
T  33714554 atttagattttgtccttgtaatttcatattcttccacttttggtccctc 33714602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 284 - 323
Target Start/End: Complemental strand, 18500641 - 18500602
Alignment:
Q  284 gtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  18500641 gtaattttagattcttccacttttggtccctcctttcatc 18500602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 270 - 323
Target Start/End: Complemental strand, 2299617 - 2299564
Alignment:
Q  270 tagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    |||||| ||| | |||||||||||||||||||||||||  ||||||||||||||    
T  2299617 tagattttgtccctgtaatttcagattcttccactttttatccctcctttcatc 2299564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 282 - 323
Target Start/End: Complemental strand, 30459197 - 30459156
Alignment:
Q  282 ttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    |||||||||||||||||| ||||||||||| |||||||||||    
T  30459197 ttgtaatttcagattctttcacttttggtctctcctttcatc 30459156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 323
Target Start/End: Complemental strand, 10322026 - 10321986
Alignment:
Q  283 tgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||||||||||||| |||||||||||| ||||||||||    
T  10322026 tgtaatttcagattctttcacttttggtccttcctttcatc 10321986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 315
Target Start/End: Complemental strand, 24732249 - 24732201
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctc 315  Q
    ||||||||| ||| | |||||||||| ||||||||||||||||||||||    
T  24732249 atttagattttgtccatgtaatttcatattcttccacttttggtccctc 24732201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 323
Target Start/End: Complemental strand, 26385585 - 26385529
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||||  ||||| || ||||||| |||||||||||||||||| |||||||||||    
T  26385585 atttagatgttgttcctgcaatttcatattcttccacttttggtctctcctttcatc 26385529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 319
Target Start/End: Original strand, 30618029 - 30618081
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctccttt 319  Q
    ||||||||| ||| | |||||||||| ||| ||||||||||||||||||||||    
T  30618029 atttagattttgtccctgtaatttcatattgttccacttttggtccctccttt 30618081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 321
Target Start/End: Original strand, 14680949 - 14681003
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttca 321  Q
    ||||||||| |||  ||||||||||| ||||||||||||||||||| || |||||    
T  14680949 atttagattttgtctttgtaatttcatattcttccacttttggtccttcatttca 14681003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 321
Target Start/End: Original strand, 17142744 - 17142798
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttca 321  Q
    ||||||||| ||| | |||||||||| |||||||||||||||||| ||| |||||    
T  17142744 atttagattatgtccctgtaatttcaaattcttccacttttggtctctcgtttca 17142798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 312
Target Start/End: Original strand, 32017618 - 32017648
Alignment:
Q  282 ttgtaatttcagattcttccacttttggtcc 312  Q
    |||||||||||||||||||||||||||||||    
T  32017618 ttgtaatttcagattcttccacttttggtcc 32017648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 315
Target Start/End: Original strand, 26385345 - 26385393
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctc 315  Q
    ||||||||| ||| | |||||||| | ||||||||||||||||||||||    
T  26385345 atttagattttgtccctgtaattttatattcttccacttttggtccctc 26385393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 26385469 - 26385437
Alignment:
Q  283 tgtaatttcagattcttccacttttggtccctc 315  Q
    ||||||||||||||| |||||||||||||||||    
T  26385469 tgtaatttcagattcctccacttttggtccctc 26385437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 33714678 - 33714646
Alignment:
Q  283 tgtaatttcagattcttccacttttggtccctc 315  Q
    ||||||||||||||| |||||||||||||||||    
T  33714678 tgtaatttcagattcctccacttttggtccctc 33714646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 234 - 323
Target Start/End: Original strand, 1444 - 1533
Alignment:
Q  234 gcgaatttcggttttagtccctgtnnnnnnnntatttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    |||||||||| |||||||||||||         ||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||    
T  1444 gcgaatttcgattttagtccctgtaaaaaaaagatttagattatgtccctgtaatttcagattcttccacttttggtccctcctttcatc 1533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 269 - 315
Target Start/End: Complemental strand, 1719 - 1673
Alignment:
Q  269 ttagattctgttcttgtaatttcagattcttccacttttggtccctc 315  Q
    ||||||| ||| |||||||||||||||||||||||||||||||||||    
T  1719 ttagattatgtccttgtaatttcagattcttccacttttggtccctc 1673  T

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Target: chr3 (Bit Score: 46; Significance: 3e-17; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 231 - 323
Target Start/End: Original strand, 43572419 - 43572512
Alignment:
Q  231 ttagcgaatttcggttttagtccctgtnnnnnnnnta-tttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    |||||||||||||||||||||||||||         | |||||||| ||| | |||||||||||||||||||||||||||||||||||||||||    
T  43572419 ttagcgaatttcggttttagtccctgtaaaaagaaaaatttagattttgtccctgtaatttcagattcttccacttttggtccctcctttcatc 43572512  T

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Target: chr3; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 267 - 323
Target Start/End: Complemental strand, 20854007 - 20853951
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||    
T  20854007 atttagattttgtccctgtaatttcagattcttccacttttggtccctcctttcatc 20853951  T

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Target: chr3; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 231 - 314
Target Start/End: Complemental strand, 14162218 - 14162135
Alignment:
Q  231 ttagcgaatttcggttttagtccctgtnnnnnnnntatttagattctgttcttgtaatttcagattcttccacttttggtccct 314  Q
    |||||||||| ||||||||||||||||         ||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  14162218 ttagcgaattccggttttagtccctgtaaaaaagagatttagattttgtccttgtaatttcagattcttccacttttggtccct 14162135  T

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Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 269 - 323
Target Start/End: Original strand, 11003801 - 11003855
Alignment:
Q  269 ttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||    
T  11003801 ttagattttgtccttgtaatttcagattcttccacttttggtccatcctttcatc 11003855  T

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Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 267 - 321
Target Start/End: Complemental strand, 43572702 - 43572648
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttca 321  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||| |||||    
T  43572702 atttagattctgtccctgtaatttcagattcttccacttttggtccctcatttca 43572648  T

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Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 267 - 323
Target Start/End: Original strand, 14161938 - 14161994
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||||| ||| | |||||||||| ||||||||||||||||||||||||||||||    
T  14161938 atttagattatgtccctgtaatttcatattcttccacttttggtccctcctttcatc 14161994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 267 - 323
Target Start/End: Original strand, 16722058 - 16722114
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||||| ||| | |||||||||||||||||||||||||||||||| ||||||||    
T  16722058 atttagattttgtccatgtaatttcagattcttccacttttggtcccttctttcatc 16722114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 267 - 323
Target Start/End: Original strand, 33372473 - 33372529
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||||| ||| | |||||||||||||| ||||||||||||||||||||||||||    
T  33372473 atttagattttgtccctgtaatttcagattattccacttttggtccctcctttcatc 33372529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 267 - 323
Target Start/End: Original strand, 45003563 - 45003619
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||||| ||| | ||||||||||||||||||||||||| |||||||||||||||    
T  45003563 atttagattttgtccctgtaatttcagattcttccactttttgtccctcctttcatc 45003619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 267 - 321
Target Start/End: Original strand, 4204775 - 4204829
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttca 321  Q
    ||||||||| ||| | ||||||||||||||||||||||||||||||||| |||||    
T  4204775 atttagattatgtccctgtaatttcagattcttccacttttggtccctcatttca 4204829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 267 - 323
Target Start/End: Original strand, 5800672 - 5800728
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||||| ||| | |||||||||| ||||||||| ||||||||||||||||||||    
T  5800672 atttagattatgtccctgtaatttcatattcttccatttttggtccctcctttcatc 5800728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 231 - 323
Target Start/End: Complemental strand, 9267322 - 9267230
Alignment:
Q  231 ttagcgaatttcggttttagtccctgtnnnnnnnntatttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    |||||||||| || |||||||||||||        | |||||||| ||| | |||||| ||||||||||| ||||||||||||||||||||||    
T  9267322 ttagcgaattccgattttagtccctgtatataaattttttagattttgtccctgtaatatcagattcttctacttttggtccctcctttcatc 9267230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 267 - 323
Target Start/End: Complemental strand, 14171897 - 14171841
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||||| ||| | ||||||||| |||||||||||||||||||| ||||||||||    
T  14171897 atttagattttgtccctgtaatttctgattcttccacttttggtccttcctttcatc 14171841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 266 - 314
Target Start/End: Original strand, 14262102 - 14262150
Alignment:
Q  266 tatttagattctgttcttgtaatttcagattcttccacttttggtccct 314  Q
    |||||||||| ||| | ||||||||||||||||||||||||||||||||    
T  14262102 tatttagattttgtccctgtaatttcagattcttccacttttggtccct 14262150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 283 - 323
Target Start/End: Complemental strand, 19113060 - 19113020
Alignment:
Q  283 tgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  19113060 tgtaatttcagattcttctacttttggtccctcctttcatc 19113020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 283 - 323
Target Start/End: Original strand, 21632979 - 21633019
Alignment:
Q  283 tgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  21632979 tgtaatttcagattctttcacttttggtccctcctttcatc 21633019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 267 - 315
Target Start/End: Complemental strand, 21633207 - 21633159
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctc 315  Q
    ||||||||| ||| | |||||||||||||||||||||||||||||||||    
T  21633207 atttagattttgtccctgtaatttcagattcttccacttttggtccctc 21633159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 267 - 323
Target Start/End: Complemental strand, 30500352 - 30500296
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||||| ||| | |||||||||| ||| ||||||||||||||||||||||||||    
T  30500352 atttagattttgtccctgtaatttcatattgttccacttttggtccctcctttcatc 30500296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 231 - 315
Target Start/End: Complemental strand, 36991007 - 36990923
Alignment:
Q  231 ttagcgaatttcggttttagtccctgtnnnnnnnntatttagattctgttcttgtaatttcagattcttccacttttggtccctc 315  Q
    |||||||||||||||||||||||||||          |||||||||||| | |||||||| |||||||||||||||| |||||||    
T  36991007 ttagcgaatttcggttttagtccctgtaaaaaaaaagtttagattctgtccctgtaattttagattcttccacttttagtccctc 36990923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 231 - 315
Target Start/End: Complemental strand, 37016447 - 37016363
Alignment:
Q  231 ttagcgaatttcggttttagtccctgtnnnnnnnntatttagattctgttcttgtaatttcagattcttccacttttggtccctc 315  Q
    |||||||||||||||||||||||||||          |||||||||||| | |||||||| |||||||||||||||| |||||||    
T  37016447 ttagcgaatttcggttttagtccctgtaaaaaaaaagtttagattctgtccctgtaattttagattcttccacttttagtccctc 37016363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 267 - 323
Target Start/End: Original strand, 45969982 - 45970038
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||||| ||| | ||||||||||||||||| ||||||||||| |||||||||||    
T  45969982 atttagattttgtccctgtaatttcagattctttcacttttggtctctcctttcatc 45970038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 267 - 323
Target Start/End: Original strand, 49986595 - 49986651
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||||| ||| | |||||||||||||||||| |||||||||| |||||||||||    
T  49986595 atttagattttgtccctgtaatttcagattcttctacttttggtctctcctttcatc 49986651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 283 - 323
Target Start/End: Complemental strand, 52552983 - 52552943
Alignment:
Q  283 tgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  52552983 tgtaatttcatattcttccacttttggtccctcctttcatc 52552943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 314
Target Start/End: Complemental strand, 5800916 - 5800869
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccct 314  Q
    ||||||||| ||| |||||||||||| |||||||||||||||||||||    
T  5800916 atttagattttgtccttgtaatttcatattcttccacttttggtccct 5800869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 231 - 314
Target Start/End: Original strand, 30500073 - 30500155
Alignment:
Q  231 ttagcgaatttcggttttagtccctgtnnnnnnnntatttagattctgttcttgtaatttcagattcttccacttttggtccct 314  Q
    |||||||||||||||||||||||||||         ||||||||| ||| | |||||||||| |||||||||||||||||||||    
T  30500073 ttagcgaatttcggttttagtccctgtaaaaaaaa-atttagattttgtccctgtaatttcatattcttccacttttggtccct 30500155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 268 - 315
Target Start/End: Original strand, 35995746 - 35995793
Alignment:
Q  268 tttagattctgttcttgtaatttcagattcttccacttttggtccctc 315  Q
    |||||||| ||| | |||||||||||||||||||||||||||||||||    
T  35995746 tttagattttgtccctgtaatttcagattcttccacttttggtccctc 35995793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 284 - 323
Target Start/End: Complemental strand, 35995972 - 35995933
Alignment:
Q  284 gtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  35995972 gtaatttcagattcttccacttttggtcccttctttcatc 35995933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 315
Target Start/End: Original strand, 9267042 - 9267090
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctc 315  Q
    ||||||||| ||| | |||||||||| ||||||||||||||||||||||    
T  9267042 atttagattttgtccctgtaatttcatattcttccacttttggtccctc 9267090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 323
Target Start/End: Complemental strand, 14262347 - 14262291
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||||| ||| | |||||||||| ||| |||||||||| |||||||||||||||    
T  14262347 atttagattttgtccctgtaatttcatattgttccacttttagtccctcctttcatc 14262291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 323
Target Start/End: Original strand, 38283617 - 38283673
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||||| ||||| | |||||||| ||| ||||||||||| ||||||||||||||    
T  38283617 atttagattttgttcctataatttcatattgttccacttttgatccctcctttcatc 38283673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 315
Target Start/End: Complemental strand, 49986838 - 49986791
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctc 315  Q
    ||||||||| ||| |||||||||||| ||||||||||||||||||||||    
T  49986838 atttagattttgt-cttgtaatttcatattcttccacttttggtccctc 49986791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 314
Target Start/End: Complemental strand, 15328771 - 15328724
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccct 314  Q
    ||||||||| ||| | |||||||||||||| |||||||||||||||||    
T  15328771 atttagattttgtccctgtaatttcagatttttccacttttggtccct 15328724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 314
Target Start/End: Complemental strand, 16722302 - 16722255
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccct 314  Q
    ||||||||| ||| | |||||||||| |||||||||||||||||||||    
T  16722302 atttagattttgtccctgtaatttcatattcttccacttttggtccct 16722255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 268 - 315
Target Start/End: Complemental strand, 32998444 - 32998397
Alignment:
Q  268 tttagattctgttcttgtaatttcagattcttccacttttggtccctc 315  Q
    |||||||||||| | ||||||||||||||| ||||||||| |||||||    
T  32998444 tttagattctgtccctgtaatttcagattcctccacttttagtccctc 32998397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 314
Target Start/End: Original strand, 52552759 - 52552806
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccct 314  Q
    ||||||||| ||| | |||||||||||||||||||||||||| |||||    
T  52552759 atttagattttgtccctgtaatttcagattcttccacttttgatccct 52552806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 315
Target Start/End: Complemental strand, 9267168 - 9267134
Alignment:
Q  281 cttgtaatttcagattcttccacttttggtccctc 315  Q
    ||||||||||||||||| |||||||||||||||||    
T  9267168 cttgtaatttcagattcctccacttttggtccctc 9267134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 315
Target Start/End: Original strand, 21633081 - 21633115
Alignment:
Q  281 cttgtaatttcagattcttccacttttggtccctc 315  Q
    ||||||||||||||||| |||||||||||||||||    
T  21633081 cttgtaatttcagattcctccacttttggtccctc 21633115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 313
Target Start/End: Complemental strand, 33372715 - 33372669
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccc 313  Q
    ||||||||| ||| | |||||||||||||||||||||||||| ||||    
T  33372715 atttagattttgtccctgtaatttcagattcttccacttttgatccc 33372669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 323
Target Start/End: Complemental strand, 17465679 - 17465622
Alignment:
Q  266 tatttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    |||||| ||| ||| | ||||| || |||||||| |||||||||||||||||||||||    
T  17465679 tatttaaattttgtccctgtaactttagattctttcacttttggtccctcctttcatc 17465622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 315
Target Start/End: Original strand, 14171653 - 14171701
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctc 315  Q
    ||||||||| ||| | |||||||||| ||||||||||||||| ||||||    
T  14171653 atttagattttgtccctgtaatttcaaattcttccacttttgatccctc 14171701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 16722178 - 16722210
Alignment:
Q  283 tgtaatttcagattcttccacttttggtccctc 315  Q
    ||||||||||||||| |||||||||||||||||    
T  16722178 tgtaatttcagattcctccacttttggtccctc 16722210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 319
Target Start/End: Complemental strand, 17649321 - 17649269
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctccttt 319  Q
    ||||||||| ||| | |||||||||||||| |||||| ||||||| |||||||    
T  17649321 atttagattttgtccctgtaatttcagattattccacatttggtctctccttt 17649269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 315
Target Start/End: Original strand, 20853763 - 20853811
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctc 315  Q
    ||||||||| ||| | | |||||||| ||||||||||||||||||||||    
T  20853763 atttagattttgtccctataatttcatattcttccacttttggtccctc 20853811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 323
Target Start/End: Complemental strand, 38283861 - 38283805
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||||| ||| | | |||||||||||||||||||||||| |||||  |||||||    
T  38283861 atttagattttgtccctataatttcagattcttccacttttgatcccttatttcatc 38283805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 323
Target Start/End: Complemental strand, 47575567 - 47575527
Alignment:
Q  283 tgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    |||||||||||||| ||| |||||||||| |||||||||||    
T  47575567 tgtaatttcagatttttcaacttttggtctctcctttcatc 47575527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 49986715 - 49986747
Alignment:
Q  283 tgtaatttcagattcttccacttttggtccctc 315  Q
    ||||||||||||||| |||||||||||||||||    
T  49986715 tgtaatttcagattcctccacttttggtccctc 49986747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 1e-16; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 231 - 319
Target Start/End: Original strand, 17762313 - 17762401
Alignment:
Q  231 ttagcgaatttcggttttagtccctgtnnnnnnnntatttagattctgttcttgtaatttcagattcttccacttttggtccctccttt 319  Q
    |||||||||| ||||||||||||||||         ||||| ||| ||||| |||||||||||||||||||||||||||||||||||||    
T  17762313 ttagcgaattccggttttagtccctgtaaaaaaaagatttatattttgttcctgtaatttcagattcttccacttttggtccctccttt 17762401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 231 - 323
Target Start/End: Original strand, 24074333 - 24074426
Alignment:
Q  231 ttagcgaatttcggttttagtccctgtnnnnnnnn-tatttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    |||||||||||||||||||||||||||         |||||||||| |||   |||||||||| ||||||||||||||||||||||||||||||    
T  24074333 ttagcgaatttcggttttagtccctgtaaaaaaaaatatttagattttgtctctgtaatttcatattcttccacttttggtccctcctttcatc 24074426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 267 - 323
Target Start/End: Complemental strand, 7126228 - 7126172
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||||| ||| | |||||||||| ||||||||||||||||||||||||||||||    
T  7126228 atttagattttgtccctgtaatttcatattcttccacttttggtccctcctttcatc 7126172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 283 - 323
Target Start/End: Original strand, 14411780 - 14411820
Alignment:
Q  283 tgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  14411780 tgtaatttcagattcttccacttttggtccctcctttcatc 14411820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 235 - 315
Target Start/End: Complemental strand, 14412009 - 14411929
Alignment:
Q  235 cgaatttcggttttagtccctgtnnnnnnnntatttagattctgttcttgtaatttcagattcttccacttttggtccctc 315  Q
    |||||||||||||||||||||||         ||||||||| ||| ||||||||||||||||||||||| |||||||||||    
T  14412009 cgaatttcggttttagtccctgtaaaaaaaaaatttagattttgtccttgtaatttcagattcttccacgtttggtccctc 14411929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 267 - 323
Target Start/End: Original strand, 29444873 - 29444929
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||||| ||| |||||||||||| ||||||| ||||||||||||||||||||||    
T  29444873 atttagattatgtccttgtaatttcatattcttctacttttggtccctcctttcatc 29444929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 267 - 323
Target Start/End: Complemental strand, 41001664 - 41001608
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||||| ||| | | |||||||||||||||||||||||||||||||||||||||    
T  41001664 atttagattttgtccctataatttcagattcttccacttttggtccctcctttcatc 41001608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 267 - 314
Target Start/End: Complemental strand, 29445117 - 29445070
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccct 314  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  29445117 atttagattttgtccttgtaatttcagattcttccacttttggtccct 29445070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 267 - 321
Target Start/End: Original strand, 6817189 - 6817243
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttca 321  Q
    ||||||||| ||| | ||||||||||||||||||||||||||||||||| |||||    
T  6817189 atttagattatgtccatgtaatttcagattcttccacttttggtccctcatttca 6817243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 267 - 321
Target Start/End: Original strand, 20709279 - 20709333
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttca 321  Q
    ||||||||||||| | |||||||||| |||||||||||||||||||||| |||||    
T  20709279 atttagattctgtccctgtaatttcaaattcttccacttttggtccctcatttca 20709333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 267 - 319
Target Start/End: Complemental strand, 994057 - 994005
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctccttt 319  Q
    ||||||||| ||| | ||||||| |||||||||||||||||||||||||||||    
T  994057 atttagattttgtccctgtaattgcagattcttccacttttggtccctccttt 994005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 267 - 323
Target Start/End: Complemental strand, 6817432 - 6817376
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||||| ||| | |||||||||| |||||||||||||||||| |||||||||||    
T  6817432 atttagattttgtccctgtaatttcatattcttccacttttggtcactcctttcatc 6817376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 231 - 323
Target Start/End: Original strand, 14143932 - 14144024
Alignment:
Q  231 ttagcgaatttcggttttagtccctgtnnnnnnnntatttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    |||||||||| ||||||||||||||||         ||||||||| ||| | |||||||||| ||||||||||||||||| |||| |||||||    
T  14143932 ttagcgaattccggttttagtccctgtaaaaaaaagatttagattttgtccctgtaatttcatattcttccacttttggtacctcatttcatc 14144024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 267 - 323
Target Start/End: Original strand, 18336535 - 18336591
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||||| ||| | ||||||||||||||||||| |||||| ||||||||||||||    
T  18336535 atttagattttgtccctgtaatttcagattcttccgcttttgatccctcctttcatc 18336591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 267 - 315
Target Start/End: Original strand, 24837236 - 24837284
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctc 315  Q
    ||||||||| ||| |||||||||||| ||||||||||||||||||||||    
T  24837236 atttagattttgtccttgtaatttcatattcttccacttttggtccctc 24837284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 267 - 323
Target Start/End: Complemental strand, 31799951 - 31799895
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||||| ||| | ||||||||||||||||||| |||||| ||||||||||||||    
T  31799951 atttagattttgtccatgtaatttcagattcttcctcttttgatccctcctttcatc 31799895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 314
Target Start/End: Complemental strand, 24074613 - 24074566
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccct 314  Q
    ||||||||| ||| |||||||||||| |||||||||||||||||||||    
T  24074613 atttagattttgtccttgtaatttcatattcttccacttttggtccct 24074566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 268 - 315
Target Start/End: Original strand, 28070532 - 28070579
Alignment:
Q  268 tttagattctgttcttgtaatttcagattcttccacttttggtccctc 315  Q
    |||||||||||| ||||||||||||||||||||||||||  |||||||    
T  28070532 tttagattctgtccttgtaatttcagattcttccactttgagtccctc 28070579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 314
Target Start/End: Original strand, 31799707 - 31799754
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccct 314  Q
    ||||||||| ||| | ||||||||||||||||||||||||||||||||    
T  31799707 atttagattttgtccctgtaatttcagattcttccacttttggtccct 31799754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 269 - 323
Target Start/End: Complemental strand, 4919299 - 4919245
Alignment:
Q  269 ttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||| ||| | |||||||||||||||||| ||||||| ||||||||||||||    
T  4919299 ttagattttgtccctgtaatttcagattcttctacttttgatccctcctttcatc 4919245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 267 - 321
Target Start/End: Complemental strand, 23979212 - 23979158
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttca 321  Q
    ||||||||| ||| | |||||||||| |||||||||||||||||||||| |||||    
T  23979212 atttagattttgtccctgtaatttcaaattcttccacttttggtccctcatttca 23979158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 315
Target Start/End: Original strand, 4919057 - 4919105
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctc 315  Q
    ||||||||| ||| | |||||||||| ||||||||||||||||||||||    
T  4919057 atttagattttgtccctgtaatttcatattcttccacttttggtccctc 4919105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 323
Target Start/End: Complemental strand, 20709523 - 20709467
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||||| ||| | |||||||||| |||||||||||||| |||| ||||||||||    
T  20709523 atttagattttgtccatgtaatttcatattcttccactttttgtccttcctttcatc 20709467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 323
Target Start/End: Complemental strand, 24650994 - 24650954
Alignment:
Q  283 tgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    |||||||| ||||||||||||||||| ||||||||||||||    
T  24650994 tgtaattttagattcttccacttttgatccctcctttcatc 24650954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 323
Target Start/End: Complemental strand, 24837480 - 24837424
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||||| ||| | |||||||||| ||||||| ||||||| ||||||||||||||    
T  24837480 atttagattttgtccctgtaatttcaaattcttctacttttgctccctcctttcatc 24837424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 314
Target Start/End: Original strand, 7125984 - 7126031
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccct 314  Q
    ||||||||| ||| | | ||||||||||||||||||||||||||||||    
T  7125984 atttagattttgtccctataatttcagattcttccacttttggtccct 7126031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 314
Target Start/End: Complemental strand, 14144212 - 14144165
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccct 314  Q
    ||||||||| ||| | |||||||||| |||||||||||||||||||||    
T  14144212 atttagattttgtccctgtaatttcaaattcttccacttttggtccct 14144165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 314
Target Start/End: Complemental strand, 18336767 - 18336720
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccct 314  Q
    ||||||||| ||| | |||||||||||||||||||||||||| |||||    
T  18336767 atttagattttgtccctgtaatttcagattcttccacttttgatccct 18336720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 310
Target Start/End: Original strand, 24650767 - 24650810
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggt 310  Q
    ||||||||| ||||| |||||||||| |||||||||||||||||    
T  24650767 atttagattttgttcctgtaatttcatattcttccacttttggt 24650810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 283 - 314
Target Start/End: Original strand, 27159073 - 27159104
Alignment:
Q  283 tgtaatttcagattcttccacttttggtccct 314  Q
    ||||||||||||||||||||||||||||||||    
T  27159073 tgtaatttcagattcttccacttttggtccct 27159104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 268 - 315
Target Start/End: Original strand, 41424584 - 41424631
Alignment:
Q  268 tttagattctgttcttgtaatttcagattcttccacttttggtccctc 315  Q
    |||||||||||| | ||| ||||||||||||||||||||| |||||||    
T  41424584 tttagattctgtccctgtcatttcagattcttccacttttagtccctc 41424631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 315
Target Start/End: Original strand, 993828 - 993862
Alignment:
Q  281 cttgtaatttcagattcttccacttttggtccctc 315  Q
    |||||||||||| ||||||||||||||||||||||    
T  993828 cttgtaatttcatattcttccacttttggtccctc 993862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 315
Target Start/End: Complemental strand, 17762575 - 17762545
Alignment:
Q  285 taatttcagattcttccacttttggtccctc 315  Q
    |||||||||||||||||||||||||||||||    
T  17762575 taatttcagattcttccacttttggtccctc 17762545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 283 - 321
Target Start/End: Original strand, 22571160 - 22571198
Alignment:
Q  283 tgtaatttcagattcttccacttttggtccctcctttca 321  Q
    |||||||||| |||||||||||||||||||||| |||||    
T  22571160 tgtaatttcatattcttccacttttggtccctcatttca 22571198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 315
Target Start/End: Complemental strand, 28071794 - 28071760
Alignment:
Q  281 cttgtaatttcagattcttccacttttggtccctc 315  Q
    |||||||||||||||||||||||||| ||||||||    
T  28071794 cttgtaatttcagattcttccactttaggtccctc 28071760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 18336643 - 18336675
Alignment:
Q  283 tgtaatttcagattcttccacttttggtccctc 315  Q
    ||||||||||||||| |||||||||||||||||    
T  18336643 tgtaatttcagattcctccacttttggtccctc 18336675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 323
Target Start/End: Complemental strand, 27159268 - 27159212
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||||| ||| | |||||||| | ||||||||| ||||||||||| ||||||||    
T  27159268 atttagattttgtccctgtaattttatattcttccatttttggtcccttctttcatc 27159212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 30512370 - 30512402
Alignment:
Q  283 tgtaatttcagattcttccacttttggtccctc 315  Q
    |||||||||||||| ||||||||||||||||||    
T  30512370 tgtaatttcagatttttccacttttggtccctc 30512402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 30552710 - 30552742
Alignment:
Q  283 tgtaatttcagattcttccacttttggtccctc 315  Q
    |||||||||||||| ||||||||||||||||||    
T  30552710 tgtaatttcagatttttccacttttggtccctc 30552742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 1e-16; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 267 - 323
Target Start/End: Original strand, 9619047 - 9619103
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||    
T  9619047 atttagattttgtccctgtaatttcagattcttccacttttggtccctcctttcatc 9619103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 269 - 323
Target Start/End: Original strand, 26252337 - 26252391
Alignment:
Q  269 ttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||| ||| | |||||||||||||||||||||||||||||||||||||||||    
T  26252337 ttagattttgtccctgtaatttcagattcttccacttttggtccctcctttcatc 26252391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 267 - 323
Target Start/End: Original strand, 3018079 - 3018135
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||||| ||| | |||||||||| ||||||||||||||||||||||||||||||    
T  3018079 atttagattttgtccctgtaatttcatattcttccacttttggtccctcctttcatc 3018135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 267 - 323
Target Start/End: Original strand, 7819081 - 7819137
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||||| ||| | |||||||||||||||||||||||||||| ||||||||||||    
T  7819081 atttagattttgtccctgtaatttcagattcttccacttttggttcctcctttcatc 7819137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 267 - 323
Target Start/End: Complemental strand, 9516921 - 9516865
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||||| ||| | |||||||||||||||||| ||||||||||||||||||||||    
T  9516921 atttagattttgtccctgtaatttcagattcttctacttttggtccctcctttcatc 9516865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 267 - 323
Target Start/End: Complemental strand, 13132252 - 13132196
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||||||||| | |||||||||| ||||||||||||||||||||| ||||||||    
T  13132252 atttagattctgtccctgtaatttcatattcttccacttttggtcccttctttcatc 13132196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 267 - 323
Target Start/End: Complemental strand, 38574279 - 38574223
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||||| ||| | |||||||||| ||||||||||||||||||||||||||||||    
T  38574279 atttagattttgtccctgtaatttcatattcttccacttttggtccctcctttcatc 38574223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 267 - 323
Target Start/End: Complemental strand, 46046735 - 46046679
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||||| ||| | |||||||||||||||||||||||||| ||||||||||||||    
T  46046735 atttagattttgtccctgtaatttcagattcttccacttttgatccctcctttcatc 46046679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 267 - 321
Target Start/End: Original strand, 13132008 - 13132062
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttca 321  Q
    ||||||||| ||||| |||||||||||||||||||||||||| |||||| |||||    
T  13132008 atttagattatgttcatgtaatttcagattcttccacttttgatccctcatttca 13132062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 269 - 323
Target Start/End: Complemental strand, 31090370 - 31090316
Alignment:
Q  269 ttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||| ||| | |||||||||||||||||| ||||||||||||||||||||||    
T  31090370 ttagattttgtccctgtaatttcagattcttctacttttggtccctcctttcatc 31090316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 270 - 323
Target Start/End: Original strand, 3273692 - 3273745
Alignment:
Q  270 tagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    |||||| ||| | |||||||||| ||||||||||||||||||||||||||||||    
T  3273692 tagattttgtccctgtaatttcatattcttccacttttggtccctcctttcatc 3273745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 267 - 315
Target Start/End: Original strand, 9516677 - 9516725
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctc 315  Q
    ||||||||| ||| |||||||||||| ||||||||||||||||||||||    
T  9516677 atttagattttgtccttgtaatttcatattcttccacttttggtccctc 9516725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 231 - 311
Target Start/End: Original strand, 12904777 - 12904857
Alignment:
Q  231 ttagcgaatttcggttttagtccctgtnnnnnnnntatttagattctgttcttgtaatttcagattcttccacttttggtc 311  Q
    ||||||||||| |||||||||||||||         ||||||||| ||| ||| |||||||||||||||||||||||||||    
T  12904777 ttagcgaattttggttttagtccctgtaaaaaaaaaatttagattttgtccttataatttcagattcttccacttttggtc 12904857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 267 - 323
Target Start/End: Original strand, 15640782 - 15640838
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||||| ||| | |||||||||| |||||| |||||||||||||||||||||||    
T  15640782 atttagattttgtccctgtaatttcatattctttcacttttggtccctcctttcatc 15640838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 267 - 323
Target Start/End: Original strand, 31944017 - 31944073
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||||| ||| | |||||||||| |||||||||||||||||| |||||||||||    
T  31944017 atttagattttgtccctgtaatttcatattcttccacttttggtctctcctttcatc 31944073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 283 - 323
Target Start/End: Complemental strand, 34064277 - 34064237
Alignment:
Q  283 tgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  34064277 tgtaatttcagattcttccacttttggtcccttctttcatc 34064237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 267 - 323
Target Start/End: Complemental strand, 48580177 - 48580121
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||||| ||| | |||||||||| ||| ||||||||||||||||||||||||||    
T  48580177 atttagattttgtccctgtaatttcatattgttccacttttggtccctcctttcatc 48580121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 314
Target Start/End: Original strand, 37012774 - 37012821
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccct 314  Q
    ||||||||| ||| | ||||||||||||||||||||||||||||||||    
T  37012774 atttagattttgtccctgtaatttcagattcttccacttttggtccct 37012821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 321
Target Start/End: Complemental strand, 3273967 - 3273877
Alignment:
Q  231 ttagcgaatttcggttttagtccctgtnnnnnnnntatttagattctgttcttgtaatttcagattcttccacttttggtccctcctttca 321  Q
    ||||||||||||||||||||||||| |         ||||||||| | | | |||||||||||||||||||||||||| |||||| |||||    
T  3273967 ttagcgaatttcggttttagtccctataaaaaaaagatttagattttatccctgtaatttcagattcttccacttttgatccctcatttca 3273877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 267 - 321
Target Start/End: Complemental strand, 15641026 - 15640972
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttca 321  Q
    ||||||||| ||| | |||||||||||||||||||||||||||| |||| |||||    
T  15641026 atttagattatgtccctgtaatttcagattcttccacttttggttcctcatttca 15640972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 269 - 323
Target Start/End: Complemental strand, 37013016 - 37012962
Alignment:
Q  269 ttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||| ||| | |||||||||| |||||||||||||||||| |||||||||||    
T  37013016 ttagattttgtccctgtaatttcatattcttccacttttggtcactcctttcatc 37012962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 267 - 312
Target Start/End: Complemental strand, 9619290 - 9619245
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtcc 312  Q
    ||||||||| ||| |||||||||||| |||||||||||||||||||    
T  9619290 atttagattttgtccttgtaatttcatattcttccacttttggtcc 9619245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 269 - 322
Target Start/End: Complemental strand, 41947165 - 41947112
Alignment:
Q  269 ttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcat 322  Q
    ||||||| ||| |||||||||||| ||| ||||||||||||||||| |||||||    
T  41947165 ttagattttgtccttgtaatttcatatttttccacttttggtccctgctttcat 41947112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 323
Target Start/End: Original strand, 9396766 - 9396822
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||||| ||| | | |||||||| ||| ||||||||||||||||||||||||||    
T  9396766 atttagattttgtccctataatttcaaatttttccacttttggtccctcctttcatc 9396822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 323
Target Start/End: Original strand, 18713027 - 18713083
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||||| ||| | |||||||||| ||| ||||| ||||||||||||||||||||    
T  18713027 atttagattttgtccctgtaatttcatattgttccaattttggtccctcctttcatc 18713083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 315
Target Start/End: Original strand, 31090128 - 31090176
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctc 315  Q
    ||||||||| ||| | |||||||||| ||||||||||||||||||||||    
T  31090128 atttagattttgtccctgtaatttcatattcttccacttttggtccctc 31090176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 34064065 - 34064097
Alignment:
Q  283 tgtaatttcagattcttccacttttggtccctc 315  Q
    |||||||||||||||||||||||||||||||||    
T  34064065 tgtaatttcagattcttccacttttggtccctc 34064097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 323
Target Start/End: Original strand, 35376245 - 35376285
Alignment:
Q  283 tgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    |||||||| |||||||||||||||||||| |||||||||||    
T  35376245 tgtaattttagattcttccacttttggtctctcctttcatc 35376285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 315
Target Start/End: Original strand, 38574035 - 38574083
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctc 315  Q
    ||||||||| ||| | |||||||||| ||||||||||||||||||||||    
T  38574035 atttagattttgtccctgtaatttcatattcttccacttttggtccctc 38574083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 309
Target Start/End: Complemental strand, 9397010 - 9396968
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttgg 309  Q
    ||||||||| ||| | |||||||||||||||||||||||||||    
T  9397010 atttagattttgtccctgtaatttcagattcttccacttttgg 9396968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 313
Target Start/End: Complemental strand, 26252548 - 26252502
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccc 313  Q
    ||||||||| ||| | |||||||||| ||||||||||||||||||||    
T  26252548 atttagattttgtccctgtaatttcatattcttccacttttggtccc 26252502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 315
Target Start/End: Complemental strand, 7819322 - 7819277
Alignment:
Q  270 tagattctgttcttgtaatttcagattcttccacttttggtccctc 315  Q
    |||||| ||| | |||||| ||||||||||||||||||||||||||    
T  7819322 tagattttgtccctgtaatgtcagattcttccacttttggtccctc 7819277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 323
Target Start/End: Original strand, 18667375 - 18667412
Alignment:
Q  286 aatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  18667375 aatttcatattgttccacttttggtccctcctttcatc 18667412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 323
Target Start/End: Original strand, 4355964 - 4356004
Alignment:
Q  283 tgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    |||||||||| |||||| ||||||||||||||| |||||||    
T  4355964 tgtaatttcatattctttcacttttggtccctcatttcatc 4356004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 9516801 - 9516769
Alignment:
Q  283 tgtaatttcagattcttccacttttggtccctc 315  Q
    ||||||||||||||| |||||||||||||||||    
T  9516801 tgtaatttcagattcctccacttttggtccctc 9516769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 31944137 - 31944169
Alignment:
Q  283 tgtaatttcagattcttccacttttggtccctc 315  Q
    ||||||||||||||| |||||||||||||||||    
T  31944137 tgtaatttcagattcctccacttttggtccctc 31944169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 35376423 - 35376391
Alignment:
Q  283 tgtaatttcagattcttccacttttggtccctc 315  Q
    |||||||||||| ||||||||||||||||||||    
T  35376423 tgtaatttcagaatcttccacttttggtccctc 35376391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 315
Target Start/End: Complemental strand, 36888991 - 36888943
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctc 315  Q
    ||||||||| ||| | ||||||||||||||| ||||||||| |||||||    
T  36888991 atttagattatgtccctgtaatttcagattcctccacttttagtccctc 36888943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 315
Target Start/End: Original strand, 43312276 - 43312324
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctc 315  Q
    ||||| ||||||| | ||||||||||||||| ||||||||| |||||||    
T  43312276 atttaaattctgtccctgtaatttcagattcctccacttttagtccctc 43312324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 1e-16; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 267 - 323
Target Start/End: Complemental strand, 4907273 - 4907217
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||    
T  4907273 atttagattttgtccctgtaatttcagattcttccacttttggtccctcctttcatc 4907217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 231 - 323
Target Start/End: Original strand, 18462316 - 18462408
Alignment:
Q  231 ttagcgaatttcggttttagtccctgtnnnnnnnntatttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    |||||||||| ||||||||||||||||         ||||||||| ||| | |||||||||||||||||||| ||||||||||||||||||||    
T  18462316 ttagcgaattccggttttagtccctgtaaaaaaaagatttagattttgtccctgtaatttcagattcttccatttttggtccctcctttcatc 18462408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 267 - 323
Target Start/End: Original strand, 24467695 - 24467751
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||    
T  24467695 atttagattttgtccctgtaatttcagattcttccacttttggtccctcctttcatc 24467751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 231 - 319
Target Start/End: Original strand, 39711103 - 39711191
Alignment:
Q  231 ttagcgaatttcggttttagtccctgtnnnnnnnntatttagattctgttcttgtaatttcagattcttccacttttggtccctccttt 319  Q
    |||||||||| ||||||||||||||||         ||||||||| ||| |||||||||||| ||||||||||||||||||||||||||    
T  39711103 ttagcgaattccggttttagtccctgtaaaaaaaagatttagattttgtccttgtaatttcatattcttccacttttggtccctccttt 39711191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 267 - 323
Target Start/End: Complemental strand, 52058319 - 52058263
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||    
T  52058319 atttagattatgtccctgtaatttcagattcttccacttttggtccctcctttcatc 52058263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 267 - 323
Target Start/End: Original strand, 17606375 - 17606431
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||||| ||||| |||||||||| |||||||||||||||||||||| |||||||    
T  17606375 atttagattttgttcctgtaatttcatattcttccacttttggtccctcatttcatc 17606431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 267 - 314
Target Start/End: Complemental strand, 17606619 - 17606572
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccct 314  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  17606619 atttagattttgtccttgtaatttcagattcttccacttttggtccct 17606572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 267 - 321
Target Start/End: Complemental strand, 24467938 - 24467884
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttca 321  Q
    ||||||||| ||| | ||||||||||||||||||||||||||||||||| |||||    
T  24467938 atttagattttgtccctgtaatttcagattcttccacttttggtccctcatttca 24467884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 200 - 315
Target Start/End: Complemental strand, 18342401 - 18342282
Alignment:
Q  200 aaaaatggataaatatcttttttcgtcc-----atgttagcgaatttcggttttagtccctgtnnnnnnnntatttagattctgttcttgtaatttcaga 294  Q
    |||||||| |||||| ||||||||||||     || |||||||||||||||||||||||||||         ||||| ||| | |||||||||||||| |    
T  18342401 aaaaatgggtaaataccttttttcgtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaa-atttaaattttattcttgtaatttcata 18342303  T
Q  295 ttcttccacttttggtccctc 315  Q
    ||||||||||||| |||||||    
T  18342302 ttcttccacttttagtccctc 18342282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 267 - 323
Target Start/End: Original strand, 30299298 - 30299354
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||||| ||| | |||||||||| |||||||||||||||||| |||||||||||    
T  30299298 atttagattttgtccctgtaatttcatattcttccacttttggtctctcctttcatc 30299354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 283 - 319
Target Start/End: Complemental strand, 33628985 - 33628949
Alignment:
Q  283 tgtaatttcagattcttccacttttggtccctccttt 319  Q
    |||||||||||||||||||||||||||||||||||||    
T  33628985 tgtaatttcagattcttccacttttggtccctccttt 33628949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 269 - 315
Target Start/End: Complemental strand, 29696867 - 29696821
Alignment:
Q  269 ttagattctgttcttgtaatttcagattcttccacttttggtccctc 315  Q
    ||||||| ||| | |||||||||||||||||||||||||||||||||    
T  29696867 ttagattttgtccatgtaatttcagattcttccacttttggtccctc 29696821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 312
Target Start/End: Complemental strand, 39826394 - 39826312
Alignment:
Q  231 ttagcgaatttcggttttagtccctgtnnnnnnnnt-atttagattctgttcttgtaatttcagattcttccacttttggtcc 312  Q
    |||||||||||||||||||||||||||          ||||||||| ||| | ||||||||||||||||||||||||||||||    
T  39826394 ttagcgaatttcggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattcttccacttttggtcc 39826312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 283 - 321
Target Start/End: Original strand, 52058094 - 52058132
Alignment:
Q  283 tgtaatttcagattcttccacttttggtccctcctttca 321  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  52058094 tgtaatttcagattcttccacttttggtccctcatttca 52058132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 278 - 315
Target Start/End: Original strand, 30299413 - 30299450
Alignment:
Q  278 gttcttgtaatttcagattcttccacttttggtccctc 315  Q
    |||||||||||||||||||| |||||||||||||||||    
T  30299413 gttcttgtaatttcagattcctccacttttggtccctc 30299450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 315
Target Start/End: Original strand, 4907029 - 4907077
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctc 315  Q
    ||||||||| ||| | |||||||||| ||||||||||||||||||||||    
T  4907029 atttagattttgtccctgtaatttcatattcttccacttttggtccctc 4907077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 315
Target Start/End: Complemental strand, 8293118 - 8293070
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctc 315  Q
    ||||||||| ||| | |||||||||| ||||||||||||||||||||||    
T  8293118 atttagattttgtccctgtaatttcatattcttccacttttggtccctc 8293070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 323
Target Start/End: Original strand, 13229803 - 13229855
Alignment:
Q  271 agattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||| ||| |||||||||||| ||||||||||||||| || |||||||||||    
T  13229803 agattttgtgcttgtaatttcatattcttccacttttgatcactcctttcatc 13229855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 323
Target Start/End: Original strand, 29696595 - 29696687
Alignment:
Q  231 ttagcgaatttcggttttagtccctgtnnnnnnnntatttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    |||||||||||||||||||||| ||||         ||||||||| ||| |  ||||||||| |||||||||||||| ||| |||||||||||    
T  29696595 ttagcgaatttcggttttagtctctgtaaaaaaaagatttagattttgtccccgtaatttcatattcttccactttttgtcactcctttcatc 29696687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 315
Target Start/End: Complemental strand, 30299542 - 30299494
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctc 315  Q
    ||||||||| ||| | |||||||| ||||||||||||||||||||||||    
T  30299542 atttagattttgtccctgtaattttagattcttccacttttggtccctc 30299494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 319
Target Start/End: Complemental strand, 34749400 - 34749364
Alignment:
Q  283 tgtaatttcagattcttccacttttggtccctccttt 319  Q
    |||||||||||||||||||||||||||| ||||||||    
T  34749400 tgtaatttcagattcttccacttttggtacctccttt 34749364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 315
Target Start/End: Original strand, 39826117 - 39826165
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctc 315  Q
    ||||||||| ||| | |||||||||||||||||||||||||| ||||||    
T  39826117 atttagattttgtccctgtaatttcagattcttccacttttgatccctc 39826165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 39970729 - 39970761
Alignment:
Q  283 tgtaatttcagattcttccacttttggtccctc 315  Q
    |||||||||||||||||||||||||||||||||    
T  39970729 tgtaatttcagattcttccacttttggtccctc 39970761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 323
Target Start/End: Complemental strand, 39970956 - 39970900
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||||| ||| | |||||||| |||| |||||||||||||||||| ||||||||    
T  39970956 atttagattttgtccctgtaattttagatccttccacttttggtcccttctttcatc 39970900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 323
Target Start/End: Original strand, 43539414 - 43539470
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||||| ||| | |||||||| | ||| ||||||||||||||||||||||||||    
T  43539414 atttagattttgtccctgtaattttatattgttccacttttggtccctcctttcatc 43539470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 323
Target Start/End: Original strand, 48072028 - 48072084
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||||| ||| | |||||||||| ||| ||||||||||| ||||||||||||||    
T  48072028 atttagattttgtccctgtaatttcatattattccacttttgctccctcctttcatc 48072084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 314
Target Start/End: Complemental strand, 16294258 - 16294211
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccct 314  Q
    ||||||||| ||| |||||||||||| |||| ||||||||||||||||    
T  16294258 atttagattttgtccttgtaatttcatattcctccacttttggtccct 16294211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 268 - 315
Target Start/End: Complemental strand, 17502040 - 17501993
Alignment:
Q  268 tttagattctgttcttgtaatttcagattcttccacttttggtccctc 315  Q
    |||||||||||| | ||||||||||||||| ||||||||| |||||||    
T  17502040 tttagattctgtccctgtaatttcagattcctccacttttagtccctc 17501993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 283 - 321
Target Start/End: Original strand, 7473875 - 7473913
Alignment:
Q  283 tgtaatttcagattcttccacttttggtccctcctttca 321  Q
    |||||||||| |||||||||||||||||||||| |||||    
T  7473875 tgtaatttcatattcttccacttttggtccctcatttca 7473913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 321
Target Start/End: Complemental strand, 18462595 - 18462541
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttca 321  Q
    ||||||||| ||| |  |||||||||||||||||||||||||||| ||| |||||    
T  18462595 atttagattttgtccccgtaatttcagattcttccacttttggtctctcatttca 18462541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 321
Target Start/End: Original strand, 42510081 - 42510135
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttca 321  Q
    ||||||||| ||| | |||||||||| |||||||||||||| ||||||| |||||    
T  42510081 atttagattttgtccctgtaatttcatattcttccacttttagtccctcatttca 42510135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 283 - 321
Target Start/End: Complemental strand, 42510205 - 42510167
Alignment:
Q  283 tgtaatttcagattcttccacttttggtccctcctttca 321  Q
    ||||||||||||||| ||||||||||||||||| |||||    
T  42510205 tgtaatttcagattcctccacttttggtccctcatttca 42510167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 323
Target Start/End: Original strand, 8292871 - 8292927
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||||| ||| | || ||||||| ||||||||||||||||| |||| |||||||    
T  8292871 atttagattttgtccctgaaatttcatattcttccacttttggttcctcttttcatc 8292927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 13229918 - 13229950
Alignment:
Q  283 tgtaatttcagattcttccacttttggtccctc 315  Q
    ||||||||||||||| |||||||||||||||||    
T  13229918 tgtaatttcagattcctccacttttggtccctc 13229950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 315
Target Start/End: Original strand, 33628757 - 33628805
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctc 315  Q
    ||||||||| ||| |  |||||||||||||||| |||||||||||||||    
T  33628757 atttagattttgtccccgtaatttcagattctttcacttttggtccctc 33628805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 315
Target Start/End: Original strand, 34749204 - 34749252
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctc 315  Q
    ||||||||| ||| |  ||||||||| ||||||||||||||||||||||    
T  34749204 atttagattttgtccccgtaatttcatattcttccacttttggtccctc 34749252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 34749328 - 34749296
Alignment:
Q  283 tgtaatttcagattcttccacttttggtccctc 315  Q
    ||||||||||||||| |||||||||||||||||    
T  34749328 tgtaatttcagattcctccacttttggtccctc 34749296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 315
Target Start/End: Complemental strand, 39711383 - 39711335
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctc 315  Q
    ||||||||| ||| |  ||||||||| ||||||||||||||||||||||    
T  39711383 atttagattttgtccccgtaatttcatattcttccacttttggtccctc 39711335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 39970837 - 39970805
Alignment:
Q  283 tgtaatttcagattcttccacttttggtccctc 315  Q
    ||||||||||||||| |||||||||||||||||    
T  39970837 tgtaatttcagattcatccacttttggtccctc 39970805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 48072148 - 48072180
Alignment:
Q  283 tgtaatttcagattcttccacttttggtccctc 315  Q
    ||||||||||||||| |||||||||||||||||    
T  48072148 tgtaatttcagattcctccacttttggtccctc 48072180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 266 - 323
Target Start/End: Complemental strand, 4181 - 4124
Alignment:
Q  266 tatttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    |||||||||| |||| |||||||||||||||||| || ||||||||||||||||||||    
T  4181 tatttagattatgttgttgtaatttcagattctttcatttttggtccctcctttcatc 4124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 267 - 323
Target Start/End: Complemental strand, 12293 - 12237
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||||| ||| | |||||||||||||||||||||||||||||| ||||||||||    
T  12293 atttagattttgtccctgtaatttcagattcttccacttttggtccatcctttcatc 12237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 267 - 323
Target Start/End: Original strand, 7689591 - 7689646
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||||||| |||||||    
T  7689591 atttagatt-tgtccttgtaatttcagattcttccacttttggtccctcttttcatc 7689646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 267 - 323
Target Start/End: Original strand, 10108437 - 10108493
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||||| ||| | |||||||||| ||||||||||||||||||||||||||||||    
T  10108437 atttagattttgtccctgtaatttcatattcttccacttttggtccctcctttcatc 10108493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 267 - 323
Target Start/End: Original strand, 14820361 - 14820417
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||||| ||| | |||||||||| ||||||||||||||||||||||||||||||    
T  14820361 atttagattttgtccctgtaatttcatattcttccacttttggtccctcctttcatc 14820417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 267 - 323
Target Start/End: Complemental strand, 17623198 - 17623142
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||||| ||| |||||||||||| |||||||||||||||||| |||||||||||    
T  17623198 atttagattttgtccttgtaatttcaaattcttccacttttggtcactcctttcatc 17623142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 269 - 323
Target Start/End: Complemental strand, 21148245 - 21148191
Alignment:
Q  269 ttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||| ||| |||||||||||| |||||||||||||| |||||||||||||||    
T  21148245 ttagattttgtccttgtaatttcatattcttccacttttagtccctcctttcatc 21148191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 267 - 323
Target Start/End: Original strand, 26136752 - 26136808
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||||| ||| |||||||||||||||||||||| ||||| | ||||||||||||    
T  26136752 atttagattttgtccttgtaatttcagattcttccaattttgattcctcctttcatc 26136808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 267 - 323
Target Start/End: Complemental strand, 30789818 - 30789762
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||||| ||| | |||||||||||||||||||||||||||||| || |||||||    
T  30789818 atttagattttgtccctgtaatttcagattcttccacttttggtccatcgtttcatc 30789762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 231 - 315
Target Start/End: Original strand, 43851695 - 43851779
Alignment:
Q  231 ttagcgaatttcggttttagtccctgtnnnnnnnntatttagattctgttcttgtaatttcagattcttccacttttggtccctc 315  Q
    |||||||||| ||||||||||||||||         ||||||||| ||| | |||||||||||||||||||||||||| ||||||    
T  43851695 ttagcgaattccggttttagtccctgtaaacaaaagatttagattttgtccctgtaatttcagattcttccacttttgatccctc 43851779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 314
Target Start/End: Original strand, 21148004 - 21148051
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccct 314  Q
    ||||||||| ||| | ||||||||||||||||||||||||||||||||    
T  21148004 atttagattttgtccctgtaatttcagattcttccacttttggtccct 21148051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 269 - 315
Target Start/End: Complemental strand, 26136994 - 26136948
Alignment:
Q  269 ttagattctgttcttgtaatttcagattcttccacttttggtccctc 315  Q
    ||||||| ||| | |||||||||||||||||||||||||||||||||    
T  26136994 ttagattttgtccctgtaatttcagattcttccacttttggtccctc 26136948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 323
Target Start/End: Original strand, 2583387 - 2583443
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||||| ||| | ||||||||| |||||||| ||||||| ||||||||||||||    
T  2583387 atttagattttgtccctgtaatttcggattcttctacttttgatccctcctttcatc 2583443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 315
Target Start/End: Original strand, 17622955 - 17623002
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctc 315  Q
    ||||||||| |||||| ||||||| ||||||||||||||||||||||||    
T  17622955 atttagattttgttct-gtaattttagattcttccacttttggtccctc 17623002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 319
Target Start/End: Original strand, 42605836 - 42605872
Alignment:
Q  283 tgtaatttcagattcttccacttttggtccctccttt 319  Q
    |||||||||| ||||||||||||||||||||||||||    
T  42605836 tgtaatttcatattcttccacttttggtccctccttt 42605872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 314
Target Start/End: Complemental strand, 5555180 - 5555133
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccct 314  Q
    ||||||||| ||| | |||||||||| |||||||||||||||||||||    
T  5555180 atttagattttgtccctgtaatttcatattcttccacttttggtccct 5555133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 314
Target Start/End: Complemental strand, 10108681 - 10108634
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccct 314  Q
    ||||||||| ||| | |||||||||| |||||||||||||||||||||    
T  10108681 atttagattttgtccctgtaatttcatattcttccacttttggtccct 10108634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 314
Target Start/End: Original strand, 14767574 - 14767621
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccct 314  Q
    ||||||||| ||| | |||||||||||||| |||||||||||||||||    
T  14767574 atttagattttgtccctgtaatttcagatttttccacttttggtccct 14767621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 314
Target Start/End: Complemental strand, 14820605 - 14820558
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccct 314  Q
    ||||||||| ||| | |||||||||| |||||||||||||||||||||    
T  14820605 atttagattttgtccctgtaatttcatattcttccacttttggtccct 14820558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 268 - 315
Target Start/End: Original strand, 38726755 - 38726802
Alignment:
Q  268 tttagattctgttcttgtaatttcagattcttccacttttggtccctc 315  Q
    |||||||| ||| |||||||||||||||||||||||||| | ||||||    
T  38726755 tttagattttgtccttgtaatttcagattcttccactttagatccctc 38726802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 268 - 315
Target Start/End: Original strand, 40486696 - 40486743
Alignment:
Q  268 tttagattctgttcttgtaatttcagattcttccacttttggtccctc 315  Q
    |||||||||||| |||||||||| ||||| |||||||||| |||||||    
T  40486696 tttagattctgtccttgtaattttagattattccacttttagtccctc 40486743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 5554954 - 5554992
Alignment:
Q  285 taatttcagattcttccacttttggtccctcctttcatc 323  Q
    |||||||| ||||||||||||||||||||| ||||||||    
T  5554954 taatttcatattcttccacttttggtcccttctttcatc 5554992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 321
Target Start/End: Original strand, 42113051 - 42113105
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttca 321  Q
    ||||||||| ||| | |||||||| |||||||| ||||||||||||||| |||||    
T  42113051 atttagattatgtccctgtaatttaagattctttcacttttggtccctcatttca 42113105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 42113277 - 42113239
Alignment:
Q  285 taatttcagattcttccacttttggtccctcctttcatc 323  Q
    |||||||| ||||||||||||||| ||||||||||||||    
T  42113277 taatttcaaattcttccacttttgatccctcctttcatc 42113239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 315
Target Start/End: Complemental strand, 10171455 - 10171406
Alignment:
Q  266 tatttagattctgttcttgtaatttcagattcttccacttttggtccctc 315  Q
    |||||||||| ||| | |||||||| |||||||| |||||||||||||||    
T  10171455 tatttagattttgtccctgtaattttagattctttcacttttggtccctc 10171406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 7689818 - 7689786
Alignment:
Q  283 tgtaatttcagattcttccacttttggtccctc 315  Q
    |||||||||||||||||||||||||| ||||||    
T  7689818 tgtaatttcagattcttccacttttgatccctc 7689786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 17623078 - 17623046
Alignment:
Q  283 tgtaatttcagattcttccacttttggtccctc 315  Q
    ||||||||||||||| |||||||||||||||||    
T  17623078 tgtaatttcagattcctccacttttggtccctc 17623046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 22494679 - 22494647
Alignment:
Q  283 tgtaatttcagattcttccacttttggtccctc 315  Q
    |||||||||| ||||||||||||||||||||||    
T  22494679 tgtaatttcaaattcttccacttttggtccctc 22494647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 42605940 - 42605972
Alignment:
Q  283 tgtaatttcagattcttccacttttggtccctc 315  Q
    ||||||||||||||| |||||||||||||||||    
T  42605940 tgtaatttcagattcctccacttttggtccctc 42605972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 323
Target Start/End: Complemental strand, 43851959 - 43851919
Alignment:
Q  283 tgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    |||||||  |||||||||||||||| |||||||||||||||    
T  43851959 tgtaattcaagattcttccactttttgtccctcctttcatc 43851919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 37; Significance: 0.000000000008; HSPs: 3)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 267 - 315
Target Start/End: Complemental strand, 4874 - 4826
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctc 315  Q
    ||||||||| ||| |||||||||||| ||||||||||||||||||||||    
T  4874 atttagattttgtccttgtaatttcatattcttccacttttggtccctc 4826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 319
Target Start/End: Original strand, 4646 - 4682
Alignment:
Q  283 tgtaatttcagattcttccacttttggtccctccttt 319  Q
    |||||||| ||||||||| ||||||||||||||||||    
T  4646 tgtaatttgagattcttctacttttggtccctccttt 4682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 4750 - 4782
Alignment:
Q  283 tgtaatttcagattcttccacttttggtccctc 315  Q
    ||||||||||||||| |||||||||||||||||    
T  4750 tgtaatttcagattcctccacttttggtccctc 4782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 268 - 314
Target Start/End: Original strand, 4735 - 4781
Alignment:
Q  268 tttagattctgttcttgtaatttcagattcttccacttttggtccct 314  Q
    |||||||||||| | ||||||||||||||| ||||||||||||||||    
T  4735 tttagattctgtccctgtaatttcagattcctccacttttggtccct 4781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 268 - 315
Target Start/End: Complemental strand, 5988 - 5941
Alignment:
Q  268 tttagattctgttcttgtaatttcagattcttccacttttggtccctc 315  Q
    |||||||||||| | ||||||||||||||| |||||||||| ||||||    
T  5988 tttagattctgtccctgtaatttcagattcctccacttttgatccctc 5941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 323
Target Start/End: Complemental strand, 7510 - 7454
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    ||||||||| ||| | |||||||||||||||||| ||||||||||  ||||||||||    
T  7510 atttagattttgtccctgtaatttcagattcttctacttttggtctatcctttcatc 7454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 315
Target Start/End: Original strand, 7293 - 7341
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctc 315  Q
    ||||||||| ||| | |||||||||| ||||||||||||| ||||||||    
T  7293 atttagattttgtccctgtaatttcatattcttccactttcggtccctc 7341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 315
Target Start/End: Complemental strand, 8633 - 8585
Alignment:
Q  267 atttagattctgttcttgtaatttcagattcttccacttttggtccctc 315  Q
    ||||||||| ||| | |||||||| ||||||||||||||||||||||||    
T  8633 atttagattttgtccctgtaattttagattcttccacttttggtccctc 8585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0881 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0881
Description:

Target: scaffold0881; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 315
Target Start/End: Original strand, 305 - 335
Alignment:
Q  285 taatttcagattcttccacttttggtccctc 315  Q
    |||||||||||||||||||||||||||||||    
T  305 taatttcagattcttccacttttggtccctc 335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 315
Target Start/End: Complemental strand, 5060 - 5011
Alignment:
Q  266 tatttagattctgttcttgtaatttcagattcttccacttttggtccctc 315  Q
    ||||||||||  || | |||||||| ||||||||||||||||||||||||    
T  5060 tatttagatttagtccctgtaattttagattcttccacttttggtccctc 5011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 323
Target Start/End: Complemental strand, 15927 - 15887
Alignment:
Q  283 tgtaatttcagattcttccacttttggtccctcctttcatc 323  Q
    |||||||||| |||||| ||||||||||| |||||||||||    
T  15927 tgtaatttcatattctttcacttttggtctctcctttcatc 15887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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