View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16853_low_20 (Length: 318)

Name: NF16853_low_20
Description: NF16853
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16853_low_20
NF16853_low_20
[»] scaffold0449 (1 HSPs)
scaffold0449 (14-231)||(4088-4286)
[»] chr3 (26 HSPs)
chr3 (255-300)||(46429510-46429555)
chr3 (255-300)||(9129458-9129503)
chr3 (255-300)||(9137565-9137610)
chr3 (255-300)||(47284340-47284385)
chr3 (255-300)||(5415783-5415828)
chr3 (255-300)||(5415897-5415942)
chr3 (255-300)||(7302346-7302391)
chr3 (255-300)||(42005980-42006025)
chr3 (255-300)||(44436258-44436303)
chr3 (255-300)||(46672830-46672875)
chr3 (255-300)||(47767432-47767477)
chr3 (255-300)||(49457343-49457388)
chr3 (255-300)||(53129870-53129915)
chr3 (255-299)||(46001364-46001408)
chr3 (257-300)||(39215952-39215995)
chr3 (255-286)||(47284226-47284257)
chr3 (255-300)||(9129344-9129389)
chr3 (255-300)||(9137451-9137496)
chr3 (255-300)||(27252008-27252053)
chr3 (255-300)||(31189424-31189469)
chr3 (259-300)||(35279929-35279970)
chr3 (255-300)||(36398016-36398061)
chr3 (255-300)||(37054394-37054439)
chr3 (255-300)||(37321550-37321595)
chr3 (255-300)||(44692822-44692867)
chr3 (255-300)||(44692936-44692981)
[»] chr4 (24 HSPs)
chr4 (257-300)||(26250911-26250954)
chr4 (255-300)||(4896648-4896693)
chr4 (255-300)||(15660297-15660342)
chr4 (255-300)||(2125857-2125902)
chr4 (255-300)||(5715744-5715789)
chr4 (255-300)||(11040968-11041012)
chr4 (255-300)||(15660183-15660228)
chr4 (255-300)||(41498604-41498649)
chr4 (255-300)||(49111426-49111471)
chr4 (255-299)||(1112605-1112649)
chr4 (257-300)||(4896746-4896789)
chr4 (257-300)||(7352814-7352857)
chr4 (257-300)||(10127976-10128019)
chr4 (255-298)||(31473849-31473892)
chr4 (257-300)||(42844657-42844700)
chr4 (255-300)||(857353-857398)
chr4 (255-300)||(1107166-1107211)
chr4 (255-300)||(7352926-7352971)
chr4 (255-300)||(14982280-14982325)
chr4 (255-300)||(16516171-16516216)
chr4 (255-300)||(31742878-31742923)
chr4 (255-300)||(36455907-36455952)
chr4 (256-300)||(4441338-4441382)
chr4 (258-298)||(10633035-10633075)
[»] chr8 (20 HSPs)
chr8 (255-300)||(24044960-24045005)
chr8 (255-300)||(3853616-3853661)
chr8 (255-300)||(3858074-3858119)
chr8 (255-300)||(14800074-14800119)
chr8 (255-300)||(14991692-14991737)
chr8 (255-300)||(37268121-37268166)
chr8 (257-300)||(4156281-4156324)
chr8 (255-298)||(11744759-11744802)
chr8 (257-300)||(13404829-13404872)
chr8 (257-299)||(3853731-3853773)
chr8 (257-299)||(3858189-3858231)
chr8 (255-300)||(17110869-17110914)
chr8 (255-300)||(27322687-27322732)
chr8 (255-300)||(28324700-28324745)
chr8 (255-300)||(29257389-29257434)
chr8 (255-300)||(31807409-31807453)
chr8 (255-300)||(32626072-32626117)
chr8 (255-300)||(33902667-33902712)
chr8 (255-300)||(36103101-36103146)
chr8 (255-300)||(42711394-42711439)
[»] chr5 (25 HSPs)
chr5 (255-300)||(37722919-37722964)
chr5 (257-300)||(13243518-13243561)
chr5 (255-300)||(6634015-6634060)
chr5 (255-300)||(9764338-9764383)
chr5 (255-300)||(15374074-15374119)
chr5 (255-300)||(22303895-22303940)
chr5 (255-300)||(40090439-40090484)
chr5 (255-300)||(40643931-40643976)
chr5 (257-300)||(2721585-2721628)
chr5 (253-300)||(15804320-15804367)
chr5 (255-298)||(25935317-25935360)
chr5 (257-300)||(28828369-28828412)
chr5 (257-300)||(28828461-28828504)
chr5 (255-300)||(2316378-2316423)
chr5 (255-300)||(9764452-9764497)
chr5 (255-300)||(16515132-16515177)
chr5 (255-300)||(22766952-22766997)
chr5 (255-300)||(23091963-23092007)
chr5 (255-300)||(26281294-26281339)
chr5 (255-300)||(32390086-32390131)
chr5 (255-300)||(41762240-41762285)
chr5 (256-300)||(3563278-3563322)
chr5 (255-300)||(13243457-13243504)
chr5 (256-300)||(20523247-20523291)
chr5 (256-300)||(33245397-33245441)
[»] chr2 (20 HSPs)
chr2 (255-300)||(17180297-17180342)
chr2 (255-300)||(784907-784952)
chr2 (257-298)||(11793897-11793938)
chr2 (255-300)||(14365700-14365745)
chr2 (255-300)||(14537199-14537244)
chr2 (255-300)||(41461629-41461674)
chr2 (255-298)||(10480119-10480162)
chr2 (257-300)||(11532281-11532324)
chr2 (257-300)||(41461517-41461560)
chr2 (255-300)||(769036-769081)
chr2 (255-300)||(1583837-1583882)
chr2 (255-300)||(11141305-11141350)
chr2 (259-300)||(11684603-11684644)
chr2 (255-300)||(14365813-14365858)
chr2 (255-300)||(17905654-17905699)
chr2 (255-300)||(27033490-27033535)
chr2 (255-300)||(33189285-33189330)
chr2 (255-300)||(35047707-35047752)
chr2 (255-300)||(45094499-45094544)
chr2 (256-300)||(30751374-30751418)
[»] chr1 (25 HSPs)
chr1 (255-300)||(8224768-8224813)
chr1 (255-300)||(38277415-38277460)
chr1 (257-300)||(40264144-40264187)
chr1 (255-300)||(4038189-4038234)
chr1 (255-300)||(15034773-15034818)
chr1 (255-300)||(23536067-23536112)
chr1 (255-300)||(30190250-30190295)
chr1 (255-300)||(31166310-31166355)
chr1 (255-300)||(50005079-50005124)
chr1 (256-300)||(32573036-32573080)
chr1 (255-298)||(24273250-24273293)
chr1 (257-300)||(28632613-28632656)
chr1 (257-300)||(38277529-38277571)
chr1 (257-300)||(50005193-50005236)
chr1 (255-285)||(17502198-17502228)
chr1 (258-300)||(37036977-37037019)
chr1 (255-300)||(4038075-4038120)
chr1 (255-300)||(10166499-10166544)
chr1 (255-300)||(15034659-15034704)
chr1 (255-300)||(26501107-26501152)
chr1 (255-300)||(27935599-27935644)
chr1 (255-300)||(34756427-34756472)
chr1 (255-300)||(43623006-43623051)
chr1 (255-300)||(44410425-44410470)
chr1 (255-299)||(27804380-27804424)
[»] chr7 (21 HSPs)
chr7 (255-298)||(35776971-35777014)
chr7 (255-300)||(2057509-2057554)
chr7 (255-300)||(29195709-29195754)
chr7 (255-300)||(34398963-34399008)
chr7 (255-300)||(40110737-40110782)
chr7 (255-300)||(43955517-43955562)
chr7 (255-298)||(26162153-26162196)
chr7 (255-298)||(31632722-31632765)
chr7 (257-300)||(43955628-43955671)
chr7 (255-300)||(2057395-2057440)
chr7 (255-300)||(5644791-5644836)
chr7 (255-300)||(6498779-6498824)
chr7 (255-300)||(14603276-14603321)
chr7 (253-286)||(19865564-19865597)
chr7 (255-300)||(21635885-21635930)
chr7 (259-300)||(23455261-23455302)
chr7 (255-300)||(25189240-25189285)
chr7 (255-300)||(28539182-28539227)
chr7 (255-300)||(35455804-35455849)
chr7 (255-300)||(39342656-39342701)
chr7 (255-300)||(44915195-44915240)
[»] scaffold0044 (1 HSPs)
scaffold0044 (259-300)||(56388-56429)
[»] chr6 (6 HSPs)
chr6 (255-300)||(9285647-9285692)
chr6 (255-300)||(9763126-9763171)
chr6 (255-300)||(6919821-6919866)
chr6 (255-300)||(28918165-28918210)
chr6 (255-300)||(34245008-34245053)
chr6 (255-295)||(33733432-33733472)
[»] scaffold0400 (1 HSPs)
scaffold0400 (256-300)||(4526-4570)
[»] scaffold0365 (1 HSPs)
scaffold0365 (256-300)||(5170-5214)
[»] scaffold1562 (2 HSPs)
scaffold1562 (257-300)||(519-562)
scaffold1562 (255-300)||(405-450)
[»] scaffold1158 (2 HSPs)
scaffold1158 (257-300)||(2031-2074)
scaffold1158 (255-300)||(2143-2188)
[»] scaffold0129 (1 HSPs)
scaffold0129 (257-300)||(19200-19243)
[»] scaffold0009 (1 HSPs)
scaffold0009 (255-300)||(42092-42137)


Alignment Details
Target: scaffold0449 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 14 - 231
Target Start/End: Original strand, 4088 - 4286
Alignment:
Q  14 tgagaagaaactcatgcaaaggccaagaatgtatactgaaattttctcaatgtcatctttcaagtcctcagaaaggccaagaatgcataccttttggatt 113  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||    
T  4088 tgagaagaaactcatgcaaaggccaagaatgcatactgaaattttctcaatgtgatctttcaagtcctgagaaaggccaagaatgcataccttttgggtt 4187  T
Q  114 gtgatagtgatatcatttgtatcagatagccatggtgagggaggagaagaaatgagaaatgtggtagctgtagtcgatcataatgggagtaatgag---a 210  Q
    ||||||                      |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||   |    
T  4188 gtgata----------------------gccatggtgagggaagagaagaaatgagaaatgtggtagctgtagtcgatcataatgggagtaatgagggaa 4265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 46429555 - 46429510
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||||||||||||||||||| |||||||||||||    
T  46429555 agagtgtgtttggatgagggaatattttgaggtaatgtaatgtttt 46429510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 9129503 - 9129458
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||    
T  9129503 agagtgtgtttggatgagggaatgttttgagggaatgtaatgtttt 9129458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 9137610 - 9137565
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||    
T  9137610 agagtgtgtttggatgagggaatgttttgagggaatgtaatgtttt 9137565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 47284385 - 47284340
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||    
T  47284385 agagtgtgtttggatgagagaatattttgaggtaatgtaatgtttt 47284340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 255 - 300
Target Start/End: Original strand, 5415783 - 5415828
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||  ||||||||||||||| |||||||||||||    
T  5415783 agagtgtgtttggataggggaatattttgagggaatgtaatgtttt 5415828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 5415942 - 5415897
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||| ||||||||||||||| || ||||||||||    
T  5415942 agagtgtgtttggatgggggaatattttgagggaaagtaatgtttt 5415897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 255 - 300
Target Start/End: Original strand, 7302346 - 7302391
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    ||||||||||||||||||||||| |||||||  |||||||||||||    
T  7302346 agagtgtgtttggatgagggaatgttttgagagaatgtaatgtttt 7302391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 42006025 - 42005980
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||    
T  42006025 agagtgtgtttggatgggggaatgttttgagggaatgtaatgtttt 42005980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 255 - 300
Target Start/End: Original strand, 44436258 - 44436303
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||    
T  44436258 agagtgtgtttggatgggggaatgttttgagggaatgtaatgtttt 44436303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 46672875 - 46672830
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||    
T  46672875 agagtgtgtttggatgggggaatgttttgagggaatgtaatgtttt 46672830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 255 - 300
Target Start/End: Original strand, 47767432 - 47767477
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||    
T  47767432 agagtgtgtttggatgggggaatgttttgagggaatgtaatgtttt 47767477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 255 - 300
Target Start/End: Original strand, 49457343 - 49457388
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||    
T  49457343 agagtgtgtttggatgggggaatgttttgagggaatgtaatgtttt 49457388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 53129915 - 53129870
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    ||||||||||||||||||||||| ||| |||| |||||||||||||    
T  53129915 agagtgtgtttggatgagggaatgtttcgagggaatgtaatgtttt 53129870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 299
Target Start/End: Original strand, 46001364 - 46001408
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttt 299  Q
    ||||||||||||||||  |||||||||||||| ||||||||||||    
T  46001364 agagtgtgtttggatggcggaatattttgaggtaatgtaatgttt 46001408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 257 - 300
Target Start/End: Complemental strand, 39215995 - 39215952
Alignment:
Q  257 agtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||| ||||||||||||| ||| |||||||||    
T  39215995 agtgtgtttggatgagagaatattttgaggtaatataatgtttt 39215952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 255 - 286
Target Start/End: Complemental strand, 47284257 - 47284226
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgagg 286  Q
    ||||||||||||||||||||||||||||||||    
T  47284257 agagtgtgtttggatgagggaatattttgagg 47284226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Original strand, 9129344 - 9129389
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||| | || |||||||||| |||||||||||||    
T  9129344 agagtgtgtttggatgggagactattttgagggaatgtaatgtttt 9129389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Original strand, 9137451 - 9137496
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||| | || |||||||||| |||||||||||||    
T  9137451 agagtgtgtttggatgggagactattttgagggaatgtaatgtttt 9137496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 27252053 - 27252008
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||| ||| || |||||||| |||||||||||||    
T  27252053 agagtgtgtttggatggggggatgttttgagggaatgtaatgtttt 27252008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 31189469 - 31189424
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||| ||||| |||| |||||||| |||||||||||||    
T  31189469 agagtgtgtttgaatgagagaatgttttgaggtaatgtaatgtttt 31189424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 300
Target Start/End: Complemental strand, 35279970 - 35279929
Alignment:
Q  259 tgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||| |||||| |||||||| |||||||||||||    
T  35279970 tgtgtttggatgggggaatgttttgagggaatgtaatgtttt 35279929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 36398061 - 36398016
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||| |||||| |||||||| |||||| ||||||    
T  36398061 agagtgtgtttggatgggggaatgttttgagggaatgtattgtttt 36398016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Original strand, 37054394 - 37054439
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||| |||||| |||| ||| |||||||||||||    
T  37054394 agagtgtgtttggatgggggaatgttttaagggaatgtaatgtttt 37054439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Original strand, 37321550 - 37321595
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    ||||||| |||||||| ||||||||||||||| || ||||||||||    
T  37321550 agagtgtatttggatgggggaatattttgaggaaaagtaatgtttt 37321595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Original strand, 44692822 - 44692867
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||| |||||| |||||||| || ||||||||||    
T  44692822 agagtgtgtttggatgggggaatgttttgagggaaagtaatgtttt 44692867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 44692981 - 44692936
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    ||||||||||||||||  ||||| |||||||| |||||||||||||    
T  44692981 agagtgtgtttggatggaggaatgttttgagggaatgtaatgtttt 44692936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 257 - 300
Target Start/End: Original strand, 26250911 - 26250954
Alignment:
Q  257 agtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||||||||||||||||| |||||||||||||    
T  26250911 agtgtgtttggatgagggaatattttgaggtaatgtaatgtttt 26250954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 300
Target Start/End: Original strand, 4896648 - 4896693
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||    
T  4896648 agagtgtgtttggatgggggaatattttgaggtaatgtaatgtttt 4896693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 15660342 - 15660297
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||    
T  15660342 agagtgtgtttggatgagggaatgttttgagggaatgtaatgtttt 15660297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 255 - 300
Target Start/End: Original strand, 2125857 - 2125902
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||| ||||||||||||||| |||||| ||||||    
T  2125857 agagtgtgtttggatgggggaatattttgagggaatgtattgtttt 2125902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 255 - 300
Target Start/End: Original strand, 5715744 - 5715789
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    ||||||||||||||||||||||| |||||||  |||||||||||||    
T  5715744 agagtgtgtttggatgagggaatgttttgagataatgtaatgtttt 5715789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 255 - 300
Target Start/End: Original strand, 11040968 - 11041012
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||    
T  11040968 agagtgtgtttggatg-gggaatattttgagggaatgtaatgtttt 11041012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 255 - 300
Target Start/End: Original strand, 15660183 - 15660228
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||  ||||||||||||||| |||||||||||||    
T  15660183 agagtgtgtttggataggggaatattttgaggtaatgtaatgtttt 15660228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 41498649 - 41498604
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    ||||||||||||||||  |||||||||||||| |||||||||||||    
T  41498649 agagtgtgtttggatggaggaatattttgagggaatgtaatgtttt 41498604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 49111471 - 49111426
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||    
T  49111471 agagtgtgtttggatgggggaatgttttgagggaatgtaatgtttt 49111426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 299
Target Start/End: Original strand, 1112605 - 1112649
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttt 299  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||    
T  1112605 agagtgtgtttggatgggggaatgttttgaggaaatgtaatgttt 1112649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 257 - 300
Target Start/End: Complemental strand, 4896789 - 4896746
Alignment:
Q  257 agtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||| || |||||||||||| |||||||||||||    
T  4896789 agtgtgtttggatggggaaatattttgagggaatgtaatgtttt 4896746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 257 - 300
Target Start/End: Original strand, 7352814 - 7352857
Alignment:
Q  257 agtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||| |||||| |||||||| |||||||||||||    
T  7352814 agtgtgtttggatgggggaatgttttgagggaatgtaatgtttt 7352857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 257 - 300
Target Start/End: Original strand, 10127976 - 10128019
Alignment:
Q  257 agtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||| ||||||||||||| | |||||||||||||    
T  10127976 agtgtgtttggatgggggaatattttgaagtaatgtaatgtttt 10128019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 255 - 298
Target Start/End: Original strand, 31473849 - 31473892
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtt 298  Q
    |||||||||||||||| |||||| |||||||| |||||||||||    
T  31473849 agagtgtgtttggatgggggaatgttttgagggaatgtaatgtt 31473892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 257 - 300
Target Start/End: Complemental strand, 42844700 - 42844657
Alignment:
Q  257 agtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||| || |||||||||||| |||||||||||||    
T  42844700 agtgtgtttggatggggaaatattttgaggtaatgtaatgtttt 42844657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 857398 - 857353
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||| || ||| |||||||| |||||||||||||    
T  857398 agagtgtgtttggatggggaaatgttttgagggaatgtaatgtttt 857353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 1107211 - 1107166
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    ||||||| |||||||| ||||||||||||||| ||| |||||||||    
T  1107211 agagtgtatttggatgggggaatattttgagggaatataatgtttt 1107166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 7352971 - 7352926
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||| || ||| |||||||| |||||||||||||    
T  7352971 agagtgtgtttggatggggaaatgttttgagggaatgtaatgtttt 7352926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Original strand, 14982280 - 14982325
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    ||||||||||||||||  ||||| |||||||| |||||||||||||    
T  14982280 agagtgtgtttggatggaggaatgttttgagggaatgtaatgtttt 14982325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Original strand, 16516171 - 16516216
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||| |||||| |||||| | |||||||||||||    
T  16516171 agagtgtgtttggatgggggaatgttttgacggaatgtaatgtttt 16516216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 31742923 - 31742878
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    ||||||||||||||||  ||||| |||||||| |||||||||||||    
T  31742923 agagtgtgtttggatggaggaatgttttgagggaatgtaatgtttt 31742878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Original strand, 36455907 - 36455952
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||| |||||| |||||||| ||| |||||||||    
T  36455907 agagtgtgtttggatgggggaatgttttgagggaatctaatgtttt 36455952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 300
Target Start/End: Original strand, 4441338 - 4441382
Alignment:
Q  256 gagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||  ||||| |||||||| |||||||||||||    
T  4441338 gagtgtgtttggatggtggaatgttttgagggaatgtaatgtttt 4441382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 258 - 298
Target Start/End: Original strand, 10633035 - 10633075
Alignment:
Q  258 gtgtgtttggatgagggaatattttgaggcaatgtaatgtt 298  Q
    ||||||||||||| |||||| |||||||| |||||||||||    
T  10633035 gtgtgtttggatgggggaatgttttgagggaatgtaatgtt 10633075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000002; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 300
Target Start/End: Original strand, 24044960 - 24045005
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||    
T  24044960 agagtgtgtttggatgagggaatgttttgagggaatgtaatgtttt 24045005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 255 - 300
Target Start/End: Original strand, 3853616 - 3853661
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||    
T  3853616 agagtgtgtttggatgggggaatgttttgagggaatgtaatgtttt 3853661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 255 - 300
Target Start/End: Original strand, 3858074 - 3858119
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||    
T  3858074 agagtgtgtttggatgggggaatgttttgagggaatgtaatgtttt 3858119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 14800119 - 14800074
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||| ||||||||||||||| || ||||||||||    
T  14800119 agagtgtgtttggatgggggaatattttgagggaaagtaatgtttt 14800074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 255 - 300
Target Start/End: Original strand, 14991692 - 14991737
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||    
T  14991692 agagtgtgtttggatgggggaatgttttgaggtaatgtaatgtttt 14991737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 37268166 - 37268121
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||  ||||||||||||||| |||||||||||||    
T  37268166 agagtgtgtttggataggggaatattttgaggtaatgtaatgtttt 37268121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 257 - 300
Target Start/End: Complemental strand, 4156324 - 4156281
Alignment:
Q  257 agtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||| | ||||||||||||| |||||||||||||    
T  4156324 agtgtgtttggatgggagaatattttgagggaatgtaatgtttt 4156281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 255 - 298
Target Start/End: Complemental strand, 11744802 - 11744759
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtt 298  Q
    |||||||||||||||||| |||||||| |||| |||||||||||    
T  11744802 agagtgtgtttggatgagagaatatttagagggaatgtaatgtt 11744759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 257 - 300
Target Start/End: Original strand, 13404829 - 13404872
Alignment:
Q  257 agtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||| || |||||||||||| |||||||||||||    
T  13404829 agtgtgtttggatggggaaatattttgaggtaatgtaatgtttt 13404872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 3853773 - 3853731
Alignment:
Q  257 agtgtgtttggatgagggaatattttgaggcaatgtaatgttt 299  Q
    |||||||||||||| || |||||||||||| ||||||||||||    
T  3853773 agtgtgtttggatggggaaatattttgaggtaatgtaatgttt 3853731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 3858231 - 3858189
Alignment:
Q  257 agtgtgtttggatgagggaatattttgaggcaatgtaatgttt 299  Q
    |||||||||||||| || |||||||||||| ||||||||||||    
T  3858231 agtgtgtttggatggggaaatattttgaggtaatgtaatgttt 3858189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Original strand, 17110869 - 17110914
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||| || ||| |||||||| |||||||||||||    
T  17110869 agagtgtgtttggatggggaaatgttttgagggaatgtaatgtttt 17110914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 27322732 - 27322687
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||| | |||| |||||||| |||||||||||||    
T  27322732 agagtgtgtttggatgggagaatgttttgagggaatgtaatgtttt 27322687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 28324745 - 28324700
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    ||||||||||||||||  ||||| |||||||| |||||||||||||    
T  28324745 agagtgtgtttggatggaggaatgttttgagggaatgtaatgtttt 28324700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 29257434 - 29257389
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||| |||||| |||||||| |||||| ||||||    
T  29257434 agagtgtgtttggatgggggaatgttttgagggaatgtattgtttt 29257389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Original strand, 31807409 - 31807453
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||||| |||| |||||||| |||||||||||||    
T  31807409 agagtgtgtttggatgagagaatgttttgagg-aatgtaatgtttt 31807453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 32626117 - 32626072
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||| ||||||| |||||| |||||||| |||||||||||||    
T  32626117 agagtgtgcttggatgggggaatcttttgagggaatgtaatgtttt 32626072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Original strand, 33902667 - 33902712
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    ||||||||||||||||  ||||| |||||||| |||||||||||||    
T  33902667 agagtgtgtttggatggaggaatgttttgagggaatgtaatgtttt 33902712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Original strand, 36103101 - 36103146
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    ||||||||||||||||  ||||| |||||||| |||||||||||||    
T  36103101 agagtgtgtttggatggaggaatgttttgagggaatgtaatgtttt 36103146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 42711439 - 42711394
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||  |||||| |||||||| |||||||||||||    
T  42711439 agagtgtgtttggattggggaatgttttgagggaatgtaatgtttt 42711394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000002; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 37722964 - 37722919
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||    
T  37722964 agagtgtgtttggatgggggaatattttgagggaatgtaatgtttt 37722919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 257 - 300
Target Start/End: Complemental strand, 13243561 - 13243518
Alignment:
Q  257 agtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||| ||||||||||||||| |||||||||||||    
T  13243561 agtgtgtttggatgggggaatattttgaggtaatgtaatgtttt 13243518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 255 - 300
Target Start/End: Original strand, 6634015 - 6634060
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||| ||| ||||||||||| |||||||||||||    
T  6634015 agagtgtgtttggatggggggatattttgaggtaatgtaatgtttt 6634060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 255 - 300
Target Start/End: Original strand, 9764338 - 9764383
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||| ||||||||||||||| || ||||||||||    
T  9764338 agagtgtgtttggatgggggaatattttgagggaaagtaatgtttt 9764383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 15374119 - 15374074
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||    
T  15374119 agagtgtgtttggatgggggaatgttttgagggaatgtaatgtttt 15374074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 22303940 - 22303895
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||    
T  22303940 agagtgtgtttggatgggggaatgttttgagggaatgtaatgtttt 22303895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 40090484 - 40090439
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||    
T  40090484 agagtgtgtttggatgggggaatgttttgaggaaatgtaatgtttt 40090439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 40643976 - 40643931
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||    
T  40643976 agagtgtgtttggatgggggaatgttttgagggaatgtaatgtttt 40643931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 257 - 300
Target Start/End: Complemental strand, 2721628 - 2721585
Alignment:
Q  257 agtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||| |||||| |||||||| |||||||||||||    
T  2721628 agtgtgtttggatgggggaatgttttgagggaatgtaatgtttt 2721585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 253 - 300
Target Start/End: Original strand, 15804320 - 15804367
Alignment:
Q  253 tgagagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||||| |||||| |||||||| |||||| ||||||    
T  15804320 tgagagtgtgtttggatgggggaatgttttgagggaatgtagtgtttt 15804367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 255 - 298
Target Start/End: Complemental strand, 25935360 - 25935317
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtt 298  Q
    |||||||||||||||| |||||| |||||||| |||||||||||    
T  25935360 agagtgtgtttggatgggggaatgttttgagggaatgtaatgtt 25935317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 257 - 300
Target Start/End: Original strand, 28828369 - 28828412
Alignment:
Q  257 agtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||| |||||| |||||||| |||||||||||||    
T  28828369 agtgtgtttggatgggggaatgttttgagggaatgtaatgtttt 28828412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 257 - 300
Target Start/End: Complemental strand, 28828504 - 28828461
Alignment:
Q  257 agtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||| || |||||||||||| |||||||||||||    
T  28828504 agtgtgtttggatggggaaatattttgaggtaatgtaatgtttt 28828461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Original strand, 2316378 - 2316423
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||| |||||| |||||||| |||||||| ||||    
T  2316378 agagtgtgtttggatgggggaatgttttgagggaatgtaatatttt 2316423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 9764497 - 9764452
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||| |||||| ||| |||| |||||||||||||    
T  9764497 agagtgtgtttggatgggggaatgtttcgagggaatgtaatgtttt 9764452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 16515177 - 16515132
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||||| |||| |||| ||| |||||||||||||    
T  16515177 agagtgtgtttggatgagagaatgtttttagggaatgtaatgtttt 16515132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Original strand, 22766952 - 22766997
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||| |||||| |||||||| ||| |||||||||    
T  22766952 agagtgtgtttggatgggggaatgttttgagggaatataatgtttt 22766997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Original strand, 23091963 - 23092007
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    ||||||||||| |||| ||||||||||||||| |||||||||||||    
T  23091963 agagtgtgttttgatg-gggaatattttgagggaatgtaatgtttt 23092007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 26281339 - 26281294
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||| |||||  |||||||| |||||||||||||    
T  26281339 agagtgtgtttggatgggggaacgttttgagggaatgtaatgtttt 26281294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 32390131 - 32390086
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    ||||||||||||||| || |||| |||||||| |||||||||||||    
T  32390131 agagtgtgtttggattagagaattttttgagggaatgtaatgtttt 32390086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 41762285 - 41762240
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||| |||||| |||||||| |||||| ||||||    
T  41762285 agagtgtgtttggatgggggaatgttttgagggaatgtattgtttt 41762240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 300
Target Start/End: Original strand, 3563278 - 3563322
Alignment:
Q  256 gagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    ||||||||||||||  |||||| |||||||| |||||||||||||    
T  3563278 gagtgtgtttggataggggaatgttttgagggaatgtaatgtttt 3563322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 300
Target Start/End: Original strand, 13243457 - 13243504
Alignment:
Q  255 agagtgtgtttg--gatgagggaatattttgaggcaatgtaatgtttt 300  Q
    ||||||||||||  ||||||||||| |||||||| |||||||||||||    
T  13243457 agagtgtgtttgtggatgagggaatgttttgagggaatgtaatgtttt 13243504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 300
Target Start/End: Complemental strand, 20523291 - 20523247
Alignment:
Q  256 gagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    ||||||||||||||| |||||| |||||||  |||||||||||||    
T  20523291 gagtgtgtttggatgggggaatgttttgagagaatgtaatgtttt 20523247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 300
Target Start/End: Complemental strand, 33245441 - 33245397
Alignment:
Q  256 gagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    ||||||||||||||| |||||| |||||| | |||||||||||||    
T  33245441 gagtgtgtttggatgggggaatgttttgatggaatgtaatgtttt 33245397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000002; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 300
Target Start/End: Original strand, 17180297 - 17180342
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||    
T  17180297 agagtgtgtttggatgagggaatgttttgagggaatgtaatgtttt 17180342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 784952 - 784907
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||| ||||||||||||| | |||||||||||||    
T  784952 agagtgtgtttggatgggggaatattttgatggaatgtaatgtttt 784907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 257 - 298
Target Start/End: Original strand, 11793897 - 11793938
Alignment:
Q  257 agtgtgtttggatgagggaatattttgaggcaatgtaatgtt 298  Q
    |||||||||||||| ||||||||||||||| |||||||||||    
T  11793897 agtgtgtttggatgggggaatattttgagggaatgtaatgtt 11793938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 255 - 300
Target Start/End: Original strand, 14365700 - 14365745
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||    
T  14365700 agagtgtgtttggatgggggaatgttttgagggaatgtaatgtttt 14365745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 255 - 300
Target Start/End: Original strand, 14537199 - 14537244
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||    
T  14537199 agagtgtgtttggatgggggaatgttttgagggaatgtaatgtttt 14537244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 41461674 - 41461629
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||    
T  41461674 agagtgtgtttggatgggggaatgttttgagggaatgtaatgtttt 41461629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 255 - 298
Target Start/End: Original strand, 10480119 - 10480162
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtt 298  Q
    |||||||||||||||| |||||| |||||||| |||||||||||    
T  10480119 agagtgtgtttggatgggggaatgttttgagggaatgtaatgtt 10480162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 257 - 300
Target Start/End: Complemental strand, 11532324 - 11532281
Alignment:
Q  257 agtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||| |||||||||| |||| |||||||||||||    
T  11532324 agtgtgtttggatgggggaatatttggagggaatgtaatgtttt 11532281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 257 - 300
Target Start/End: Original strand, 41461517 - 41461560
Alignment:
Q  257 agtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||| || |||||||||||| |||||||||||||    
T  41461517 agtgtgtttggatggggaaatattttgaggtaatgtaatgtttt 41461560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Original strand, 769036 - 769081
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||| |||||| |||||||| |||||| ||||||    
T  769036 agagtgtgtttggatgggggaatgttttgagggaatgtattgtttt 769081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 1583882 - 1583837
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||| |||||| |||||||| |||||| ||||||    
T  1583882 agagtgtgtttggatgggggaatgttttgagggaatgtattgtttt 1583837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Original strand, 11141305 - 11141350
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||| |||||| |||||||| |||||| ||||||    
T  11141305 agagtgtgtttggatgggggaatgttttgagggaatgtattgtttt 11141350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 300
Target Start/End: Original strand, 11684603 - 11684644
Alignment:
Q  259 tgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||| |||||| |||||||| |||||||||||||    
T  11684603 tgtgtttggatgggggaatgttttgagggaatgtaatgtttt 11684644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 14365858 - 14365813
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    ||||||||||||||||  ||||| |||||||| |||||||||||||    
T  14365858 agagtgtgtttggatggaggaatgttttgagggaatgtaatgtttt 14365813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Original strand, 17905654 - 17905699
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||| |||||||||||| |||||||  |||||||||||||    
T  17905654 agagtgtgttaggatgagggaatgttttgagagaatgtaatgtttt 17905699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Original strand, 27033490 - 27033535
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||| |||||| |||||||  |||||||||||||    
T  27033490 agagtgtgtttggatgggggaatgttttgagagaatgtaatgtttt 27033535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 33189330 - 33189285
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||| |||||| |||||||| |||||| ||||||    
T  33189330 agagtgtgtttggatgggggaatgttttgagggaatgtattgtttt 33189285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 35047752 - 35047707
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||| |||||| |||||||| |||||| ||||||    
T  35047752 agagtgtgtttggatgggggaatgttttgaggaaatgtattgtttt 35047707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 45094544 - 45094499
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||| |||||||||| |||||||| ||| |||||||||    
T  45094544 agagtgtgtttgaatgagggaatgttttgagggaatataatgtttt 45094499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 300
Target Start/End: Complemental strand, 30751418 - 30751374
Alignment:
Q  256 gagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    ||||||||||||||||| |||| |||||||  |||||||||||||    
T  30751418 gagtgtgtttggatgagagaatgttttgagataatgtaatgtttt 30751374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000002; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 300
Target Start/End: Original strand, 8224768 - 8224813
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||    
T  8224768 agagtgtgtttggatgagggaatgttttgagggaatgtaatgtttt 8224813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 300
Target Start/End: Original strand, 38277415 - 38277460
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||    
T  38277415 agagtgtgtttggatgagagaatattttgagggaatgtaatgtttt 38277460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 257 - 300
Target Start/End: Complemental strand, 40264187 - 40264144
Alignment:
Q  257 agtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||| ||||||||||||||| |||||||||||||    
T  40264187 agtgtgtttggatgggggaatattttgaggtaatgtaatgtttt 40264144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 4038234 - 4038189
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||| ||||||||||||||| || ||||||||||    
T  4038234 agagtgtgtttggatgggggaatattttgagggaaagtaatgtttt 4038189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 15034818 - 15034773
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||    
T  15034818 agagtgtgtttggatgggggaatgttttgagggaatgtaatgtttt 15034773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 255 - 300
Target Start/End: Original strand, 23536067 - 23536112
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||    
T  23536067 agagtgtgtttggatgggggaatgttttgagggaatgtaatgtttt 23536112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 30190295 - 30190250
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||    
T  30190295 agagtgtgtttggatgggggaatgttttgagggaatgtaatgtttt 30190250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 255 - 300
Target Start/End: Original strand, 31166310 - 31166355
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    ||||||||||||||||||||||| |||||||  |||||||||||||    
T  31166310 agagtgtgtttggatgagggaatgttttgagataatgtaatgtttt 31166355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 255 - 300
Target Start/End: Original strand, 50005079 - 50005124
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    ||||||||||||||||| |||||||||||||  |||||||||||||    
T  50005079 agagtgtgtttggatgacggaatattttgagagaatgtaatgtttt 50005124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 300
Target Start/End: Complemental strand, 32573080 - 32573036
Alignment:
Q  256 gagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    ||||||| ||||||| ||||||||||||||| |||||||||||||    
T  32573080 gagtgtgattggatgggggaatattttgaggtaatgtaatgtttt 32573036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 255 - 298
Target Start/End: Complemental strand, 24273293 - 24273250
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtt 298  Q
    |||||||||||||||| |||||| |||||||| |||||||||||    
T  24273293 agagtgtgtttggatgggggaatgttttgagggaatgtaatgtt 24273250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 257 - 300
Target Start/End: Complemental strand, 28632656 - 28632613
Alignment:
Q  257 agtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    ||||||||||||||||||||| ||| |||| |||||||||||||    
T  28632656 agtgtgtttggatgagggaatgtttggagggaatgtaatgtttt 28632613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 257 - 300
Target Start/End: Complemental strand, 38277571 - 38277529
Alignment:
Q  257 agtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||| ||||||||||||||| |||||||||||||    
T  38277571 agtgtgtttggatg-gggaatattttgaggtaatgtaatgtttt 38277529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 257 - 300
Target Start/End: Complemental strand, 50005236 - 50005193
Alignment:
Q  257 agtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    ||||||||||||||  |||||||||||||| |||||||||||||    
T  50005236 agtgtgtttggatggaggaatattttgaggtaatgtaatgtttt 50005193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 285
Target Start/End: Original strand, 17502198 - 17502228
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgag 285  Q
    |||||||||||||||||||||||||||||||    
T  17502198 agagtgtgtttggatgagggaatattttgag 17502228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 300
Target Start/End: Complemental strand, 37037019 - 37036977
Alignment:
Q  258 gtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||||||| |||||||  |||||||||||||    
T  37037019 gtgtgtttggatgagggaatgttttgagtgaatgtaatgtttt 37036977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Original strand, 4038075 - 4038120
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    ||||||||||||| || |||||| |||||||| |||||||||||||    
T  4038075 agagtgtgtttgggtgggggaatgttttgagggaatgtaatgtttt 4038120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Original strand, 10166499 - 10166544
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||||| |||| ||||| || |||||||||||||    
T  10166499 agagtgtgtttggatgagagaatgttttgtggtaatgtaatgtttt 10166544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Original strand, 15034659 - 15034704
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    ||||||||||||||||  ||||| |||||||| |||||||||||||    
T  15034659 agagtgtgtttggatggaggaatgttttgagggaatgtaatgtttt 15034704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 26501152 - 26501107
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    ||||||||||||||||  ||||| |||||||| |||||||||||||    
T  26501152 agagtgtgtttggatggaggaatgttttgagggaatgtaatgtttt 26501107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 27935644 - 27935599
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    ||||||||||||||||  | |||||||||||| |||||||||||||    
T  27935644 agagtgtgtttggatggagaaatattttgagggaatgtaatgtttt 27935599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Original strand, 34756427 - 34756472
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||| ||||||||||| |||||| |||||||| |||||||||||||    
T  34756427 agagagtgtttggatgggggaatgttttgagggaatgtaatgtttt 34756472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 43623051 - 43623006
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||| |||||| |||||| | |||||||||||||    
T  43623051 agagtgtgtttggatgggggaatgttttgatggaatgtaatgtttt 43623006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 44410470 - 44410425
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||  ||||||||||||||| ||||||| |||||    
T  44410470 agagtgtgtttggattggggaatattttgaggtaatgtaaagtttt 44410425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 299
Target Start/End: Complemental strand, 27804424 - 27804380
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttt 299  Q
    ||||||||||||||||  ||||| |||||||| ||||||||||||    
T  27804424 agagtgtgtttggatggaggaatgttttgaggaaatgtaatgttt 27804380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000003; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 298
Target Start/End: Complemental strand, 35777014 - 35776971
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtt 298  Q
    ||||||||||||||||||||||| |||||||| |||||||||||    
T  35777014 agagtgtgtttggatgagggaatgttttgagggaatgtaatgtt 35776971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 2057554 - 2057509
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||| ||||||||||||||| || ||||||||||    
T  2057554 agagtgtgtttggatgggggaatattttgagggaaagtaatgtttt 2057509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 255 - 300
Target Start/End: Original strand, 29195709 - 29195754
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    ||||||||||||||||  |||||||||||||| |||||||||||||    
T  29195709 agagtgtgtttggatggaggaatattttgaggtaatgtaatgtttt 29195754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 34399008 - 34398963
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||    
T  34399008 agagtgtgtttggatgggggaatgttttgagggaatgtaatgtttt 34398963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 255 - 300
Target Start/End: Original strand, 40110737 - 40110782
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||    
T  40110737 agagtgtgtttggatgggggaatgttttgagggaatgtaatgtttt 40110782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 255 - 300
Target Start/End: Original strand, 43955517 - 43955562
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||    
T  43955517 agagtgtgtttggatgggggaatgttttgagggaatgtaatgtttt 43955562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 255 - 298
Target Start/End: Complemental strand, 26162196 - 26162153
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtt 298  Q
    |||||||||||||||| |||||| |||||||| |||||||||||    
T  26162196 agagtgtgtttggatgggggaatgttttgagggaatgtaatgtt 26162153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 255 - 298
Target Start/End: Original strand, 31632722 - 31632765
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtt 298  Q
    |||||||||||||||| |||||| |||||||| |||||||||||    
T  31632722 agagtgtgtttggatgggggaatgttttgagggaatgtaatgtt 31632765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 257 - 300
Target Start/End: Complemental strand, 43955671 - 43955628
Alignment:
Q  257 agtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||| |||||| |||||||| |||||||||||||    
T  43955671 agtgtgtttggatgggggaatgttttgagggaatgtaatgtttt 43955628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Original strand, 2057395 - 2057440
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||| |||||| |||||||  |||||||||||||    
T  2057395 agagtgtgtttggatgggggaatgttttgagcgaatgtaatgtttt 2057440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 5644836 - 5644791
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||| |||||  |||||||| |||||||||||||    
T  5644836 agagtgtgtttggatgggggaacgttttgaggtaatgtaatgtttt 5644791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 6498824 - 6498779
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    ||||||||||||||||  ||||| |||||||| |||||||||||||    
T  6498824 agagtgtgtttggatggaggaatgttttgagggaatgtaatgtttt 6498779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 14603321 - 14603276
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||| |||||| |||||||| |||||| ||||||    
T  14603321 agagtgtgtttggatgggggaatgttttgagggaatgtattgtttt 14603276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 286
Target Start/End: Complemental strand, 19865597 - 19865564
Alignment:
Q  253 tgagagtgtgtttggatgagggaatattttgagg 286  Q
    ||||||||||||||||||||||||| ||||||||    
T  19865597 tgagagtgtgtttggatgagggaatgttttgagg 19865564  T

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Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Original strand, 21635885 - 21635930
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||| ||||||| | ||||||||||||| |||||||||||||    
T  21635885 agagtgtgcttggatgggagaatattttgaggtaatgtaatgtttt 21635930  T

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Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 300
Target Start/End: Complemental strand, 23455302 - 23455261
Alignment:
Q  259 tgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    ||||||||||||||||||| |||||||| |||||| ||||||    
T  23455302 tgtgtttggatgagggaatgttttgagggaatgtattgtttt 23455261  T

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Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 25189285 - 25189240
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||| |||||| |||||||| |||| ||||||||    
T  25189285 agagtgtgtttggatgtgggaatgttttgaggtaatgcaatgtttt 25189240  T

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Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 28539227 - 28539182
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||| |||||| |||||||| |||||| ||||||    
T  28539227 agagtgtgtttggatgggggaatgttttgagggaatgtattgtttt 28539182  T

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Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Original strand, 35455804 - 35455849
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||| |||||| |||||||| |||||| ||||||    
T  35455804 agagtgtgtttggatgggggaatgttttgagggaatgtattgtttt 35455849  T

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Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 39342701 - 39342656
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||| |||||| |||||||| |||||| ||||||    
T  39342701 agagtgtgtttggatgggggaatgttttgagggaatgtattgtttt 39342656  T

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Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Original strand, 44915195 - 44915240
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||||| |||| |||||||| || ||||||||||    
T  44915195 agagtgtgtttggatgagagaattttttgagggaacgtaatgtttt 44915240  T

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Target: scaffold0044 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 259 - 300
Target Start/End: Complemental strand, 56429 - 56388
Alignment:
Q  259 tgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||||||||||||||| || ||||||||||    
T  56429 tgtgtttggatgagggaatattttgagggaaagtaatgtttt 56388  T

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Target: chr6 (Bit Score: 34; Significance: 0.0000000004; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 255 - 300
Target Start/End: Original strand, 9285647 - 9285692
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||    
T  9285647 agagtgtgtttggatgggggaatgttttgagggaatgtaatgtttt 9285692  T

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Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 9763171 - 9763126
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    ||||||||||||||||  |||||||||||||| |||||||||||||    
T  9763171 agagtgtgtttggatggaggaatattttgaggtaatgtaatgtttt 9763126  T

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Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 6919866 - 6919821
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||| |||||| |||||||| || ||||||||||    
T  6919866 agagtgtgtttggatgggggaatgttttgagggaaagtaatgtttt 6919821  T

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Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Original strand, 28918165 - 28918210
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    ||||||||||||||||  ||||| |||||||| |||||||||||||    
T  28918165 agagtgtgtttggatggaggaatgttttgagggaatgtaatgtttt 28918210  T

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Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 34245053 - 34245008
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    ||||||||||||||||  ||||| |||||||| |||||||||||||    
T  34245053 agagtgtgtttggatggaggaatgttttgagggaatgtaatgtttt 34245008  T

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Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 295
Target Start/End: Original strand, 33733432 - 33733472
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaat 295  Q
    |||||||||||||||| |||||| |||||||| ||||||||    
T  33733432 agagtgtgtttggatgggggaatgttttgagggaatgtaat 33733472  T

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Target: scaffold0400 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 300
Target Start/End: Complemental strand, 4570 - 4526
Alignment:
Q  256 gagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||||||||| |||||||| ||| |||||||||    
T  4570 gagtgtgtttggatgagggaatgttttgagggaatataatgtttt 4526  T

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Target: scaffold0365 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 300
Target Start/End: Complemental strand, 5214 - 5170
Alignment:
Q  256 gagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||||||||| |||||||| ||| |||||||||    
T  5214 gagtgtgtttggatgagggaatgttttgagggaatataatgtttt 5170  T

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Target: scaffold1562 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold1562
Description:

Target: scaffold1562; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 257 - 300
Target Start/End: Complemental strand, 562 - 519
Alignment:
Q  257 agtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||| |||||| |||||||| |||||||||||||    
T  562 agtgtgtttggatgggggaatgttttgagggaatgtaatgtttt 519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Original strand, 405 - 450
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||| ||||||||||||||| ||  |||||||||    
T  405 agagtgtgtttggatgggggaatattttgagggaaaataatgtttt 450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold1158
Description:

Target: scaffold1158; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 257 - 300
Target Start/End: Original strand, 2031 - 2074
Alignment:
Q  257 agtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||| |||||| |||||||| |||||||||||||    
T  2031 agtgtgtttggatgggggaatgttttgagggaatgtaatgtttt 2074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 2188 - 2143
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||| ||||||||||||||| ||  |||||||||    
T  2188 agagtgtgtttggatgggggaatattttgagggaaaataatgtttt 2143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 257 - 300
Target Start/End: Original strand, 19200 - 19243
Alignment:
Q  257 agtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||| |||| |||||||||| |||||||||||||    
T  19200 agtgtgtttggatgggggagtattttgagggaatgtaatgtttt 19243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 42137 - 42092
Alignment:
Q  255 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 300  Q
    |||||||||||||||| |||||  |||||||| |||||||||||||    
T  42137 agagtgtgtttggatgggggaacgttttgagggaatgtaatgtttt 42092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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