View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16853_low_43 (Length: 213)
Name: NF16853_low_43
Description: NF16853
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16853_low_43 |
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Alignment Details
Target: chr3 (Bit Score: 154; Significance: 7e-82; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 18 - 200
Target Start/End: Complemental strand, 45388396 - 45388214
Alignment:
| Q |
18 |
gttatgacatcattcacctttatcatatatcaaaaaacattacttgtactatatttcttcatcaaaactcgaccttcctcttccatccaaagtttaatga |
117 |
Q |
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| T |
45388396 |
gttatgacatcattcacctttatcatatatcaaaaaacattacttgtactatatttcttcatcaaaactcgaccttcctcttccatccaaagtttaatga |
45388297 |
T |
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| Q |
118 |
ttannnnnnnagcgaaaagtgtgtcttatatcatttgacgttaaaggacatgtaatggagtaatttgttaaaccagtcatatt |
200 |
Q |
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| T |
45388296 |
ttatttttttagcgaaacgtgtgtcttatatcatttgacgttaaaggacatgtaatggagtaatttgttaaaccaatcatatt |
45388214 |
T |
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