View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16856_low_10 (Length: 221)

Name: NF16856_low_10
Description: NF16856
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16856_low_10
NF16856_low_10
[»] chr5 (5 HSPs)
chr5 (19-204)||(2997934-2998117)
chr5 (29-196)||(2998149-2998313)
chr5 (29-204)||(2998347-2998520)
chr5 (108-204)||(2998554-2998650)
chr5 (30-160)||(2997771-2997899)
[»] chr2 (7 HSPs)
chr2 (18-196)||(32717259-32717435)
chr2 (30-204)||(32716630-32716802)
chr2 (30-204)||(32716837-32717009)
chr2 (29-201)||(32717047-32717217)
chr2 (30-155)||(32716472-32716595)
chr2 (61-155)||(32714058-32714152)
chr2 (108-148)||(32717514-32717554)
[»] chr6 (5 HSPs)
chr6 (63-204)||(14904742-14904883)
chr6 (30-201)||(14904918-14905087)
chr6 (73-200)||(14905166-14905293)
chr6 (92-204)||(14905392-14905504)
chr6 (30-155)||(14905539-14905662)
[»] chr8 (9 HSPs)
chr8 (92-197)||(34916677-34916782)
chr8 (93-194)||(34534115-34534216)
chr8 (93-197)||(38454144-38454248)
chr8 (92-155)||(34544957-34545020)
chr8 (93-155)||(39848031-39848093)
chr8 (95-155)||(34549092-34549152)
chr8 (30-144)||(34548819-34548934)
chr8 (96-194)||(39848853-39848951)
chr8 (93-197)||(34538933-34539037)
[»] chr4 (1 HSPs)
chr4 (92-154)||(44474135-44474197)
[»] chr3 (1 HSPs)
chr3 (94-155)||(7046903-7046964)


Alignment Details
Target: chr5 (Bit Score: 151; Significance: 5e-80; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 19 - 204
Target Start/End: Complemental strand, 2998117 - 2997934
Alignment:
Q  19 ggaatttctcgagaattcaccctcaaaaattgttcttgatggggatatattatccgtcctttccatgtccgtcttccatcaacccaatcaccctcatata 118  Q
    |||||||||||||||||||||||||||||||||| || ||||  ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  2998117 ggaatttctcgagaattcaccctcaaaaattgttttttatgg--atatattattcgtcctttccctgtccgtcttccatcaacccaatcaccctcatata 2998020  T
Q  119 ttgttccacttgaccatgtgtactttcccttgccatggaaaagatcattttcgaagttaccaatgtagacatccccattggatttt 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  2998019 ttgttccacttgaccatgtgtactttcccttgccatggaaaagatcattttcaaagttaccaatgaagacatccccattggatttt 2997934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 29 - 196
Target Start/End: Complemental strand, 2998313 - 2998149
Alignment:
Q  29 gagaattcaccctcaaaaattgttcttgatggggatatattatccgtcctttccatgtccgtcttccatcaacccaatcaccctcatatattgttccact 128  Q
    |||||||||||||||||| |||||| ||||||  |||||| ||||||||||||| ||||| |  | |||||||||||||||||||||||||||||||| |    
T  2998313 gagaattcaccctcaaaacttgttcctgatgg--atatatgatccgtcctttccctgtcctttgttcatcaacccaatcaccctcatatattgttccatt 2998216  T
Q  129 tgaccatgtgtactttcccttgccatggaaaagatcattttcgaagttaccaatgtagacatccccat 196  Q
    ||||||||||| ||||||| |||||||||||| ||  || || |||||||||||||||| ||||||||    
T  2998215 tgaccatgtgtgctttccc-tgccatggaaaatattgttctcaaagttaccaatgtagatatccccat 2998149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 29 - 204
Target Start/End: Complemental strand, 2998520 - 2998347
Alignment:
Q  29 gagaattcaccctcaaaaattgttcttgatggggatatattatccgtcctttccatgtccgtcttccatcaacccaatcaccctcatatattgttccact 128  Q
    |||||||||||||||||||||| || |||||   |||||| ||||| ||||||| ||||| ||||||||||| |||| ||||||  |||||||||||| |    
T  2998520 gagaattcaccctcaaaaattgatcctgatga--atatatgatccgacctttccctgtccttcttccatcaaaccaaccacccttgtatattgttccatt 2998423  T
Q  129 tgaccatgtgtactttcccttgccatggaaaagatcattttcgaagttaccaatgtagacatccccattggatttt 204  Q
    ||||||  |||||||||| ||||||||||||||||| || ||||||||||||| ||||| |||||||| |||||||    
T  2998422 tgaccacatgtactttccgttgccatggaaaagatcgttatcgaagttaccaacgtagatatccccatcggatttt 2998347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 108 - 204
Target Start/End: Complemental strand, 2998650 - 2998554
Alignment:
Q  108 accctcatatattgttccacttgaccatgtgtactttcccttgccatggaaaagatcattttcgaagttaccaatgtagacatccccattggatttt 204  Q
    ||||||||||||||||| | || | ||||||||||||||||||||||| |||| |||||| ||||||||||||| ||||| ||||||||||||||||    
T  2998650 accctcatatattgttctatttaaacatgtgtactttcccttgccatgaaaaatatcattctcgaagttaccaacgtagatatccccattggatttt 2998554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 30 - 160
Target Start/End: Complemental strand, 2997899 - 2997771
Alignment:
Q  30 agaattcaccctcaaaaattgttcttgatggggatatattatccgtcctttccatgtccgtcttccatcaacccaatcaccctcatatattgttccactt 129  Q
    ||||||||||||||||| ||| |||||| ||  || ||| | | |||||||||  |||| | || ||| |||||||||||||||||| ||||||||||||    
T  2997899 agaattcaccctcaaaacttgctcttgacgg--atttatgaccggtcctttcccagtccttttttcattaacccaatcaccctcatagattgttccactt 2997802  T
Q  130 gaccatgtgtactttcccttgccatggaaaa 160  Q
    |||||||||||||||||||||||||| ||||    
T  2997801 gaccatgtgtactttcccttgccatgaaaaa 2997771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 104; Significance: 5e-52; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 18 - 196
Target Start/End: Complemental strand, 32717435 - 32717259
Alignment:
Q  18 aggaatttctcgagaattcaccctcaaaaattgttcttgatggggatatattatccgtcctttccatgtccgtcttccatcaacccaatcaccctcatat 117  Q
    ||||||| || |||||||||||||||||| ||| || ||||||  |||||||||||||||||||| ||||| |||||||||||||||||||||||| |||    
T  32717435 aggaattcctagagaattcaccctcaaaacttgctcctgatgg--atatattatccgtcctttccctgtccttcttccatcaacccaatcaccctcgtat 32717338  T
Q  118 attgttccacttgaccatgtgtactttcccttgccatggaaaagatcattttcgaagttaccaatgtagacatccccat 196  Q
    |||||||||  | |||||||||||||||| ||||||||| |||||||| | ||||||||||||||||||| ||||||||    
T  32717337 attgttccatctaaccatgtgtactttcctttgccatggtaaagatcactctcgaagttaccaatgtagatatccccat 32717259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 30 - 204
Target Start/End: Complemental strand, 32716802 - 32716630
Alignment:
Q  30 agaattcaccctcaaaaattgttcttgatggggatatattatccgtcctttccatgtccgtcttccatcaacccaatcaccctcatatattgttccactt 129  Q
    |||||| |||||||||| ||| || ||||||  |||||| ||||| ||||||| ||||| | ||||||||||||||||||||||||||||||||||| ||    
T  32716802 agaattgaccctcaaaacttgctcctgatgg--atatatgatccgccctttccctgtcctttttccatcaacccaatcaccctcatatattgttccattt 32716705  T
Q  130 gaccatgtgtactttcccttgccatggaaaagatcattttcgaagttaccaatgtagacatccccattggatttt 204  Q
     |||| |||||||||||||||||||||||||||||| | ||||||||||||| ||||| | |||||| |||||||    
T  32716704 aaccacgtgtactttcccttgccatggaaaagatcactctcgaagttaccaacgtagatacccccatcggatttt 32716630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 30 - 204
Target Start/End: Complemental strand, 32717009 - 32716837
Alignment:
Q  30 agaattcaccctcaaaaattgttcttgatggggatatattatccgtcctttccatgtccgtcttccatcaacccaatcaccctcatatattgttccactt 129  Q
    |||||| |||||||||| |||||| |||| |  |||||| ||  | ||||||| ||||| ||||||||||||||||||||| || ||||||||||||  |    
T  32717009 agaattgaccctcaaaacttgttcctgatag--atatatcatttgccctttccctgtccttcttccatcaacccaatcaccatcgtatattgttccatgt 32716912  T
Q  130 gaccatgtgtactttcccttgccatggaaaagatcattttcgaagttaccaatgtagacatccccattggatttt 204  Q
    ||||||||||||||||| |||||||||||||||||| | ||||||||||||| ||||| | |||||| |||||||    
T  32716911 gaccatgtgtactttcctttgccatggaaaagatcactctcgaagttaccaacgtagatacccccatcggatttt 32716837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 29 - 201
Target Start/End: Complemental strand, 32717217 - 32717047
Alignment:
Q  29 gagaattcaccctcaaaaattgttcttgatggggatatattatccgtcctttccatgtccgtcttccatcaacccaatcaccctcatatattgttccact 128  Q
    |||||||||||||||||| ||| || ||||||  |||||| ||| | |||||||  |||  |||||||||||||||||||||||| ||||||  ||||      
T  32717217 gagaattcaccctcaaaagttgatcctgatgg--atatatgatctgacctttcccagtcattcttccatcaacccaatcaccctcgtatatttctccatc 32717120  T
Q  129 tgaccatgtgtactttcccttgccatggaaaagatcattttcgaagttaccaatgtagacatccccattggat 201  Q
    || ||||||||||||||||||||||| |||||||||| | | |||||||||||||||||||| ||||||||||    
T  32717119 tggccatgtgtactttcccttgccattgaaaagatcactcttgaagttaccaatgtagacatgcccattggat 32717047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 30 - 155
Target Start/End: Complemental strand, 32716595 - 32716472
Alignment:
Q  30 agaattcaccctcaaaaattgttcttgatggggatatattatccgtcctttccatgtccgtcttccatcaacccaatcaccctcatatattgttccactt 129  Q
    |||||| |||||||||| ||| || ||||||  |||||| ||||| ||||||| ||||| | ||||||||||||||||||||||||||||||||||| ||    
T  32716595 agaattgaccctcaaaacttgctcctgatgg--atatatgatccgccctttccctgtcctttttccatcaacccaatcaccctcatatattgttccattt 32716498  T
Q  130 gaccatgtgtactttcccttgccatg 155  Q
    ||||||||||||||||||||||||||    
T  32716497 gaccatgtgtactttcccttgccatg 32716472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 61 - 155
Target Start/End: Complemental strand, 32714152 - 32714058
Alignment:
Q  61 ggatatattatccgtcctttccatgtccgtcttccatcaacccaatcaccctcatatattgttccacttgaccatgtgtactttcccttgccatg 155  Q
    |||||||| ||||| ||||||| ||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  32714152 ggatatatgatccgccctttccctgtcctttttccatcaacccaatcaccctcatatattgttccatttgaccatgtgtactttcccttgccatg 32714058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 148
Target Start/End: Complemental strand, 32717554 - 32717514
Alignment:
Q  108 accctcatatattgttccacttgaccatgtgtactttccct 148  Q
    ||||||||||||||||||| ||||||| || ||||||||||    
T  32717554 accctcatatattgttccaattgaccaagtttactttccct 32717514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 90; Significance: 1e-43; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 63 - 204
Target Start/End: Original strand, 14904742 - 14904883
Alignment:
Q  63 atatattatccgtcctttccatgtccgtcttccatcaacccaatcaccctcatatattgttccacttgaccatgtgtactttcccttgccatggaaaaga 162  Q
    |||||| ||| ||| ||||| ||||| ||||||||||||||||||||||||||||||| ||||| | ||||||||||| ||||| |||||||||||||||    
T  14904742 atatatgatctgtcatttccctgtccttcttccatcaacccaatcaccctcatatatttttccattcgaccatgtgtattttcctttgccatggaaaaga 14904841  T
Q  163 tcattttcgaagttaccaatgtagacatccccattggatttt 204  Q
    ||||| | |||||||||||||||||||||||| |||||||||    
T  14904842 tcattcttgaagttaccaatgtagacatccccgttggatttt 14904883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 30 - 201
Target Start/End: Original strand, 14904918 - 14905087
Alignment:
Q  30 agaattcaccctcaaaaattgttcttgatggggatatattatccgtcctttccatgtccgtcttccatcaacccaatcaccctcatatattgttccactt 129  Q
    ||||||||||||||||| ||  || ||||||  | |||| ||||| ||||||| ||||  | ||||||||||||| |||||||||||||||  ||||| |    
T  14904918 agaattcaccctcaaaactttctcctgatgg--aaatatcatccgccctttccctgtcttttttccatcaacccagtcaccctcatatatttgtccacct 14905015  T
Q  130 gaccatgtgtactttcccttgccatggaaaagatcattttcgaagttaccaatgtagacatccccattggat 201  Q
    ||||||||||||||||||||||||||||||||| |||| || ||||||||||| |||| |||||| ||||||    
T  14905016 gaccatgtgtactttcccttgccatggaaaagaccattctcaaagttaccaatatagagatccccgttggat 14905087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 73 - 200
Target Start/End: Original strand, 14905166 - 14905293
Alignment:
Q  73 cgtcctttccatgtccgtcttccatcaacccaatcaccctcatatattgttccacttgaccatgtgtactttcccttgccatggaaaagatcattttcga 172  Q
    |||||||||| |||||  ||||||| ||||||||||||||||||||||  |||   |||||||||| |||||||||||||||||||||||| ||| ||||    
T  14905166 cgtcctttccctgtcctgcttccataaacccaatcaccctcatatatttctccctctgaccatgtgcactttcccttgccatggaaaagattattctcga 14905265  T
Q  173 agttaccaatgtagacatccccattgga 200  Q
    ||||||||| ||||||||||||||||||    
T  14905266 agttaccaacgtagacatccccattgga 14905293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 92 - 204
Target Start/End: Original strand, 14905392 - 14905504
Alignment:
Q  92 ttccatcaacccaatcaccctcatatattgttccacttgaccatgtgtactttcccttgccatggaaaagatcattttcgaagttaccaatgtagacatc 191  Q
    |||| |||||||| ||||||||||||||   ||||  |||||||||||||||||||||||||||||||  | || | | ||||||||||||||||| ||     
T  14905392 ttccgtcaacccagtcaccctcatatatctctccatctgaccatgtgtactttcccttgccatggaaagaaccactcttgaagttaccaatgtagagatt 14905491  T
Q  192 cccattggatttt 204  Q
    ||| |||||||||    
T  14905492 cccgttggatttt 14905504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 30 - 155
Target Start/End: Original strand, 14905539 - 14905662
Alignment:
Q  30 agaattcaccctcaaaaattgttcttgatggggatatattatccgtcctttccatgtccgtcttccatcaacccaatcaccctcatatattgttccactt 129  Q
    ||||||||||||||||| ||| || ||||||  |||||| ||||| |||||||  |||| |  ||| |||||||| ||||||||||||||   ||||  |    
T  14905539 agaattcaccctcaaaacttgctcctgatgg--atatatcatccgccctttcccagtcctttctccgtcaacccagtcaccctcatatatctgtccatct 14905636  T
Q  130 gaccatgtgtactttcccttgccatg 155  Q
    |||||| ||||| |||| ||||||||    
T  14905637 gaccatctgtacattcctttgccatg 14905662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 1e-24; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 92 - 197
Target Start/End: Original strand, 34916677 - 34916782
Alignment:
Q  92 ttccatcaacccaatcaccctcatatattgttccacttgaccatgtgtactttcccttgccatggaaaagatcattttcgaagttaccaatgtagacatc 191  Q
    ||||||||||||| |||||||| |||||||||||| ||| |||||||||||||||| ||||||||| ||| |||   | ||| |||||||||||||||||    
T  34916677 ttccatcaacccagtcaccctcgtatattgttccatttgtccatgtgtactttcccatgccatggagaagttcacccttgaatttaccaatgtagacatc 34916776  T
Q  192 cccatt 197  Q
    ||||||    
T  34916777 cccatt 34916782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 34534115 - 34534216
Alignment:
Q  93 tccatcaacccaatcaccctcatatattgttccacttgaccatgtgtactttcccttgccatggaaaagatcattttcgaagttaccaatgtagacatcc 192  Q
    ||||||||||||||| ||||||||||||||||||  ||||||||||||||| || ||||||||  |||| |||   | ||||||||||||||||||||||    
T  34534115 tccatcaacccaatcgccctcatatattgttccatctgaccatgtgtacttcccgttgccatgacaaagttcacccttgaagttaccaatgtagacatcc 34534214  T
Q  193 cc 194  Q
    ||    
T  34534215 cc 34534216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 93 - 197
Target Start/End: Original strand, 38454144 - 38454248
Alignment:
Q  93 tccatcaacccaatcaccctcatatattgttccacttgaccatgtgtactttcccttgccatggaaaagatcattttcgaagttaccaatgtagacatcc 192  Q
    |||||||| ||||||||||||||||| || ||||| |||| ||||| ||||||| |||||||| ||||| ||||  | ||||||||||| ||||||||||    
T  38454144 tccatcaatccaatcaccctcatatactgatccacatgacaatgtgaactttccgttgccatgaaaaagttcatccttgaagttaccaacgtagacatcc 38454243  T
Q  193 ccatt 197  Q
    |||||    
T  38454244 ccatt 38454248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 92 - 155
Target Start/End: Original strand, 34544957 - 34545020
Alignment:
Q  92 ttccatcaacccaatcaccctcatatattgttccacttgaccatgtgtactttcccttgccatg 155  Q
    ||||||||||||| |||||||| |||||||||||| ||| |||||||||||||||  |||||||    
T  34544957 ttccatcaacccagtcaccctcgtatattgttccatttgtccatgtgtactttccgatgccatg 34545020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 93 - 155
Target Start/End: Complemental strand, 39848093 - 39848031
Alignment:
Q  93 tccatcaacccaatcaccctcatatattgttccacttgaccatgtgtactttcccttgccatg 155  Q
    ||||||||||||||||||| ||||||||| ||||  |||||||||||||||||  ||||||||    
T  39848093 tccatcaacccaatcacccacatatattgatccatctgaccatgtgtactttcttttgccatg 39848031  T

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Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 155
Target Start/End: Original strand, 34549092 - 34549152
Alignment:
Q  95 catcaacccaatcaccctcatatattgttccacttgaccatgtgtactttcccttgccatg 155  Q
    |||| ||||| ||| |||| |||||||||||| ||||||||||||||||||| || |||||    
T  34549092 catcgacccattcatcctcgtatattgttccatttgaccatgtgtactttccttttccatg 34549152  T

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Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 144
Target Start/End: Original strand, 34548819 - 34548934
Alignment:
Q  30 agaattcaccctcaaaaattgttcttgatggggat-atattatccgtcctttccatgtccgtcttccatcaacccaatcaccctcatatattgttccact 128  Q
    |||||||||||||| |  |||||||||||||  |  |||| ||  ||||||||| ||||  | |||||||||||||||| || |||||||||||||   |    
T  34548819 agaattcaccctcatactttgttcttgatggccaccatatcattagtcctttccctgtcatttttccatcaacccaatcgccttcatatattgttctgtt 34548918  T
Q  129 tgaccatgtgtacttt 144  Q
    |||||||||| |||||    
T  34548919 tgaccatgtggacttt 34548934  T

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Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 194
Target Start/End: Complemental strand, 39848951 - 39848853
Alignment:
Q  96 atcaacccaatcaccctcatatattgttccacttgaccatgtgtactttcccttgccatggaaaagatcattttcgaagttaccaatgtagacatcccc 194  Q
    |||||||||||||||||| |||||||||||| ||||   |||||| ||||| ||| |||||| ||| | | |   |||||||||||| | |||||||||    
T  39848951 atcaacccaatcaccctcgtatattgttccatttgagtgtgtgtattttccattgtcatggagaagtttactcctgaagttaccaatatcgacatcccc 39848853  T

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Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 197
Target Start/End: Original strand, 34538933 - 34539037
Alignment:
Q  93 tccatcaacccaatcaccctcatatattgttccacttgaccatgtgtactttcccttgccatggaaaagatcattttcgaagttaccaatgtagacatcc 192  Q
    |||||| |||||||| ||||| |||||||||||| |  |||||||| ||||||| |  ||||||||||| | | | | |||||| || | ||| ||||||    
T  34538933 tccatccacccaatcgccctcgtatattgttccattccaccatgtgaactttccgtgtccatggaaaaggttactcttgaagtttccgaagtacacatcc 34539032  T
Q  193 ccatt 197  Q
    |||||    
T  34539033 ccatt 34539037  T

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Target: chr4 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 92 - 154
Target Start/End: Complemental strand, 44474197 - 44474135
Alignment:
Q  92 ttccatcaacccaatcaccctcatatattgttccacttgaccatgtgtactttcccttgccat 154  Q
    ||||||||||  |||||||||||||||||| ||||  |||||||||||||||||| |||||||    
T  44474197 ttccatcaacaaaatcaccctcatatattgatccatctgaccatgtgtactttccgttgccat 44474135  T

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Target: chr3 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 155
Target Start/End: Original strand, 7046903 - 7046964
Alignment:
Q  94 ccatcaacccaatcaccctcatatattgttccacttgaccatgtgtactttcccttgccatg 155  Q
    ||||||| |||||| ||||||||||||| ||||  |||||||||||| ||||| ||||||||    
T  7046903 ccatcaatccaatctccctcatatattgatccatctgaccatgtgtagtttccgttgccatg 7046964  T

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