View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16858_low_3 (Length: 385)

Name: NF16858_low_3
Description: NF16858
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16858_low_3
NF16858_low_3
[»] chr8 (39 HSPs)
chr8 (155-385)||(21967878-21968108)
chr8 (155-385)||(21980718-21980948)
chr8 (155-385)||(21985701-21985931)
chr8 (155-385)||(22009082-22009312)
chr8 (155-384)||(44494110-44494331)
chr8 (176-385)||(22000669-22000873)
chr8 (192-366)||(11774296-11774470)
chr8 (192-366)||(8414881-8415055)
chr8 (205-385)||(21328579-21328757)
chr8 (155-385)||(11251973-11252190)
chr8 (229-385)||(34950123-34950279)
chr8 (205-374)||(42560778-42560947)
chr8 (191-271)||(21386158-21386238)
chr8 (192-271)||(23427826-23427905)
chr8 (192-271)||(23913265-23913344)
chr8 (192-271)||(44385833-44385912)
chr8 (192-271)||(14399092-14399171)
chr8 (159-212)||(42561025-42561078)
chr8 (98-150)||(3697555-3697607)
chr8 (98-150)||(23825007-23825059)
chr8 (192-256)||(27942700-27942764)
chr8 (192-266)||(18864109-18864183)
chr8 (192-249)||(363268-363325)
chr8 (192-271)||(21409900-21409980)
chr8 (192-271)||(21804392-21804472)
chr8 (194-266)||(30941569-30941641)
chr8 (192-271)||(21974183-21974262)
chr8 (192-271)||(43250202-43250281)
chr8 (192-266)||(21829465-21829539)
chr8 (109-149)||(23653773-23653813)
chr8 (98-150)||(30767164-30767216)
chr8 (192-235)||(8729645-8729688)
chr8 (192-271)||(21978293-21978372)
chr8 (155-198)||(34950057-34950100)
chr8 (192-266)||(22110601-22110675)
chr8 (107-148)||(31418910-31418951)
chr8 (110-150)||(5239975-5240015)
chr8 (117-150)||(23825053-23825086)
chr8 (120-148)||(31412728-31412756)
[»] chr7 (62 HSPs)
chr7 (155-385)||(16185487-16185717)
chr7 (192-366)||(41283645-41283819)
chr7 (158-385)||(11394764-11394983)
chr7 (205-374)||(15213061-15213230)
chr7 (192-271)||(13891630-13891709)
chr7 (192-271)||(14420787-14420866)
chr7 (192-271)||(16005004-16005083)
chr7 (192-271)||(18606338-18606417)
chr7 (192-271)||(18871297-18871376)
chr7 (192-271)||(20486742-20486821)
chr7 (192-264)||(146500-146572)
chr7 (192-271)||(7520215-7520294)
chr7 (192-271)||(10607320-10607399)
chr7 (192-271)||(10897896-10897975)
chr7 (192-271)||(11660282-11660361)
chr7 (192-271)||(39268313-39268392)
chr7 (202-271)||(13892023-13892092)
chr7 (192-256)||(838148-838212)
chr7 (192-256)||(1203328-1203392)
chr7 (192-271)||(9752507-9752586)
chr7 (192-271)||(18424235-18424314)
chr7 (192-271)||(25928371-25928450)
chr7 (192-264)||(1860028-1860100)
chr7 (192-264)||(13919419-13919491)
chr7 (192-256)||(16109990-16110054)
chr7 (192-271)||(26291156-26291236)
chr7 (192-271)||(39721195-39721275)
chr7 (192-271)||(2833481-2833560)
chr7 (192-271)||(16582421-16582500)
chr7 (192-256)||(834060-834124)
chr7 (192-256)||(1199240-1199304)
chr7 (98-150)||(32771378-32771430)
chr7 (192-266)||(72376-72450)
chr7 (192-266)||(76485-76559)
chr7 (192-266)||(45171505-45171579)
chr7 (98-150)||(4279873-4279925)
chr7 (192-271)||(15083225-15083305)
chr7 (98-150)||(19616205-19616257)
chr7 (192-271)||(31725-31804)
chr7 (192-271)||(2531332-2531410)
chr7 (192-271)||(12706122-12706201)
chr7 (192-271)||(12713540-12713619)
chr7 (192-271)||(12722198-12722277)
chr7 (192-271)||(16908509-16908588)
chr7 (192-271)||(18281958-18282037)
chr7 (192-266)||(18277994-18278068)
chr7 (159-212)||(15212930-15212983)
chr7 (214-271)||(18301373-18301430)
chr7 (103-148)||(18958672-18958717)
chr7 (106-150)||(26294977-26295021)
chr7 (192-271)||(12717287-12717366)
chr7 (192-235)||(15166250-15166293)
chr7 (107-150)||(37244549-37244592)
chr7 (193-235)||(11302308-11302350)
chr7 (98-148)||(15086165-15086215)
chr7 (106-146)||(16952481-16952521)
chr7 (191-263)||(23666460-23666531)
chr7 (117-149)||(32771424-32771456)
chr7 (340-374)||(11084832-11084866)
chr7 (106-147)||(3327717-3327758)
chr7 (330-385)||(833617-833673)
chr7 (330-385)||(1198797-1198853)
[»] chr1 (29 HSPs)
chr1 (155-385)||(11809835-11810065)
chr1 (155-385)||(11944965-11945187)
chr1 (155-385)||(43630878-43631100)
chr1 (141-267)||(20032179-20032297)
chr1 (191-271)||(21406252-21406332)
chr1 (192-271)||(16370925-16371004)
chr1 (192-271)||(22132098-22132177)
chr1 (192-302)||(29533887-29533998)
chr1 (192-271)||(41801278-41801357)
chr1 (312-385)||(20032107-20032180)
chr1 (192-265)||(32649067-32649140)
chr1 (192-271)||(20230138-20230218)
chr1 (238-363)||(636478-636596)
chr1 (192-271)||(33796033-33796112)
chr1 (192-271)||(41389664-41389743)
chr1 (98-150)||(23195691-23195743)
chr1 (98-150)||(21541966-21542018)
chr1 (207-271)||(39245170-39245234)
chr1 (207-271)||(39248725-39248789)
chr1 (98-150)||(42096118-42096170)
chr1 (192-271)||(1009262-1009341)
chr1 (192-271)||(1926795-1926874)
chr1 (192-271)||(16376815-16376894)
chr1 (192-271)||(20925809-20925888)
chr1 (193-235)||(20439188-20439230)
chr1 (207-271)||(52634283-52634347)
chr1 (340-385)||(29534366-29534412)
chr1 (101-150)||(24079437-24079486)
chr1 (107-148)||(24109243-24109284)
[»] chr2 (30 HSPs)
chr2 (192-385)||(37379036-37379229)
chr2 (192-271)||(9240674-9240753)
chr2 (192-271)||(19663557-19663636)
chr2 (192-271)||(20260257-20260336)
chr2 (192-266)||(21074512-21074586)
chr2 (192-271)||(6481784-6481863)
chr2 (192-271)||(6485251-6485330)
chr2 (192-271)||(9783994-9784073)
chr2 (98-150)||(21133469-21133521)
chr2 (98-148)||(11465983-11466033)
chr2 (192-245)||(10686272-10686325)
chr2 (192-266)||(41532447-41532521)
chr2 (98-150)||(6744539-6744591)
chr2 (98-150)||(19649760-19649812)
chr2 (192-271)||(24630047-24630126)
chr2 (192-271)||(24645151-24645230)
chr2 (192-271)||(24647927-24648006)
chr2 (192-271)||(27380993-27381072)
chr2 (192-271)||(27384963-27385042)
chr2 (192-271)||(27600371-27600450)
chr2 (192-271)||(30346657-30346736)
chr2 (192-256)||(10103311-10103375)
chr2 (192-256)||(12902621-12902685)
chr2 (330-385)||(22702873-22702929)
chr2 (192-256)||(24647094-24647158)
chr2 (98-146)||(27367802-27367850)
chr2 (98-150)||(28971521-28971573)
chr2 (110-150)||(43693323-43693363)
chr2 (192-256)||(31343917-31343981)
chr2 (117-148)||(28971496-28971527)
[»] chr5 (40 HSPs)
chr5 (158-385)||(19075863-19076082)
chr5 (192-366)||(33473836-33474010)
chr5 (155-385)||(31253096-31253318)
chr5 (98-267)||(43243763-43243924)
chr5 (205-374)||(36459561-36459730)
chr5 (192-271)||(22120591-22120670)
chr5 (192-271)||(28372081-28372160)
chr5 (192-271)||(37600008-37600087)
chr5 (192-271)||(15238117-15238196)
chr5 (192-271)||(19510462-19510541)
chr5 (192-271)||(22339012-22339091)
chr5 (192-271)||(38146418-38146497)
chr5 (191-271)||(22749160-22749240)
chr5 (192-271)||(22335482-22335561)
chr5 (192-271)||(23113402-23113481)
chr5 (192-271)||(41878651-41878730)
chr5 (195-271)||(10751820-10751896)
chr5 (192-271)||(20912252-20912331)
chr5 (312-385)||(43243691-43243764)
chr5 (192-271)||(18354797-18354876)
chr5 (192-271)||(24768562-24768641)
chr5 (192-266)||(11219555-11219629)
chr5 (98-148)||(27636094-27636144)
chr5 (99-148)||(24669209-24669258)
chr5 (99-148)||(24738978-24739027)
chr5 (99-148)||(24751747-24751796)
chr5 (159-212)||(36459430-36459483)
chr5 (98-150)||(20831688-20831740)
chr5 (192-271)||(19474172-19474251)
chr5 (192-271)||(20294514-20294593)
chr5 (192-266)||(11224141-11224215)
chr5 (192-266)||(11226157-11226231)
chr5 (192-266)||(11227963-11228037)
chr5 (192-266)||(11229953-11230027)
chr5 (191-267)||(9774940-9775015)
chr5 (192-271)||(22108449-22108527)
chr5 (340-385)||(10816220-10816266)
chr5 (192-241)||(40727429-40727477)
chr5 (98-150)||(1857718-1857770)
chr5 (98-150)||(21675686-21675738)
[»] chr3 (81 HSPs)
chr3 (192-366)||(41134-41308)
chr3 (155-385)||(45220848-45221070)
chr3 (98-267)||(14648274-14648435)
chr3 (155-385)||(2249102-2249324)
chr3 (158-385)||(5841140-5841359)
chr3 (192-366)||(16325946-16326120)
chr3 (205-366)||(16840108-16840269)
chr3 (192-302)||(10834909-10835020)
chr3 (191-271)||(4590160-4590240)
chr3 (191-271)||(8491732-8491812)
chr3 (192-271)||(3801970-3802049)
chr3 (192-271)||(12853363-12853442)
chr3 (192-271)||(14670026-14670105)
chr3 (192-271)||(14764795-14764874)
chr3 (192-271)||(16795503-16795582)
chr3 (192-271)||(18899453-18899532)
chr3 (192-271)||(20249849-20249928)
chr3 (192-271)||(54519597-54519676)
chr3 (205-346)||(11912440-11912581)
chr3 (192-271)||(13435818-13435897)
chr3 (191-266)||(17318514-17318589)
chr3 (193-266)||(8928872-8928945)
chr3 (192-264)||(9532258-9532330)
chr3 (192-264)||(12304174-12304246)
chr3 (192-271)||(23372543-23372622)
chr3 (192-271)||(29545938-29546017)
chr3 (192-271)||(51299533-51299612)
chr3 (312-385)||(14648202-14648275)
chr3 (192-249)||(14681550-14681607)
chr3 (191-256)||(23173296-23173361)
chr3 (191-271)||(14068062-14068142)
chr3 (192-256)||(14664425-14664489)
chr3 (192-256)||(14667589-14667653)
chr3 (192-264)||(15463878-15463950)
chr3 (192-271)||(30064384-30064464)
chr3 (192-271)||(5219847-5219926)
chr3 (192-271)||(38312857-38312936)
chr3 (192-266)||(11301670-11301744)
chr3 (160-218)||(16840341-16840399)
chr3 (159-212)||(11912309-11912362)
chr3 (194-271)||(16751901-16751978)
chr3 (192-249)||(19774198-19774255)
chr3 (159-212)||(51608665-51608718)
chr3 (195-271)||(11853709-11853785)
chr3 (192-271)||(18933355-18933435)
chr3 (99-150)||(18757206-18757257)
chr3 (98-150)||(8583509-8583561)
chr3 (98-150)||(13969076-13969128)
chr3 (98-150)||(13974551-13974603)
chr3 (98-150)||(14084441-14084493)
chr3 (98-150)||(14089842-14089894)
chr3 (106-150)||(20187584-20187628)
chr3 (98-150)||(49399383-49399435)
chr3 (192-271)||(7108238-7108317)
chr3 (192-271)||(7112173-7112252)
chr3 (192-271)||(11068613-11068692)
chr3 (99-150)||(11850905-11850956)
chr3 (192-271)||(14497947-14498026)
chr3 (192-271)||(22320129-22320208)
chr3 (192-271)||(22335184-22335263)
chr3 (98-149)||(24123405-24123456)
chr3 (192-271)||(55021376-55021455)
chr3 (98-148)||(31690814-31690864)
chr3 (98-148)||(31943351-31943401)
chr3 (98-150)||(10597976-10598028)
chr3 (192-266)||(4108793-4108868)
chr3 (192-266)||(4112642-4112717)
chr3 (192-271)||(11167093-11167172)
chr3 (192-271)||(15616177-15616256)
chr3 (192-271)||(28948461-28948540)
chr3 (115-149)||(10597950-10597984)
chr3 (192-266)||(15963497-15963571)
chr3 (192-266)||(15967421-15967495)
chr3 (192-266)||(15971345-15971419)
chr3 (155-187)||(16840460-16840492)
chr3 (192-255)||(12337257-12337319)
chr3 (99-150)||(12419275-12419326)
chr3 (276-366)||(13435937-13436027)
chr3 (340-385)||(34852950-34852996)
chr3 (340-385)||(8928686-8928730)
chr3 (261-366)||(8928737-8928842)
[»] scaffold2015 (2 HSPs)
scaffold2015 (98-267)||(443-604)
scaffold2015 (315-385)||(371-441)
[»] chr6 (49 HSPs)
chr6 (192-366)||(23955369-23955543)
chr6 (98-267)||(14594665-14594826)
chr6 (158-385)||(28707833-28708052)
chr6 (98-267)||(7429341-7429502)
chr6 (155-385)||(9622799-9623020)
chr6 (205-374)||(34297669-34297838)
chr6 (204-374)||(25737904-25738074)
chr6 (191-271)||(18918580-18918660)
chr6 (192-271)||(27222832-27222911)
chr6 (192-264)||(12941221-12941293)
chr6 (192-270)||(4475795-4475873)
chr6 (194-264)||(28290901-28290971)
chr6 (312-385)||(7429501-7429574)
chr6 (191-271)||(18953483-18953563)
chr6 (192-271)||(23400677-23400757)
chr6 (192-271)||(2076286-2076365)
chr6 (204-271)||(23537993-23538060)
chr6 (192-271)||(31479462-31479541)
chr6 (159-212)||(1254037-1254090)
chr6 (207-271)||(16622850-16622914)
chr6 (192-256)||(22075405-22075469)
chr6 (205-256)||(1254172-1254223)
chr6 (315-385)||(14594593-14594663)
chr6 (192-266)||(19869187-19869261)
chr6 (98-148)||(23235146-23235196)
chr6 (192-266)||(23393641-23393715)
chr6 (192-266)||(23413549-23413623)
chr6 (159-212)||(34297916-34297969)
chr6 (98-150)||(24562192-24562244)
chr6 (192-256)||(27416542-27416606)
chr6 (192-271)||(8242412-8242491)
chr6 (192-271)||(11565401-11565480)
chr6 (192-271)||(11716940-11717019)
chr6 (192-271)||(12620333-12620412)
chr6 (192-271)||(27555540-27555618)
chr6 (160-218)||(25737775-25737833)
chr6 (197-266)||(22947672-22947741)
chr6 (197-266)||(22951628-22951697)
chr6 (197-266)||(23870116-23870185)
chr6 (197-266)||(23874072-23874141)
chr6 (99-150)||(5290384-5290435)
chr6 (192-255)||(14470881-14470944)
chr6 (192-271)||(22861755-22861834)
chr6 (192-271)||(23988303-23988382)
chr6 (99-150)||(26418909-26418960)
chr6 (192-266)||(16758715-16758789)
chr6 (115-148)||(5290359-5290392)
chr6 (340-376)||(20182531-20182567)
chr6 (340-376)||(22153424-22153460)
[»] chr4 (39 HSPs)
chr4 (192-366)||(28384851-28385025)
chr4 (155-385)||(37839077-37839299)
chr4 (155-385)||(42597806-42598028)
chr4 (191-271)||(631747-631827)
chr4 (191-271)||(10711824-10711904)
chr4 (191-271)||(10925594-10925674)
chr4 (192-271)||(15533219-15533298)
chr4 (192-271)||(22634926-22635005)
chr4 (192-271)||(24048384-24048463)
chr4 (191-271)||(27532751-27532831)
chr4 (192-264)||(36036952-36037024)
chr4 (192-271)||(12422943-12423022)
chr4 (192-271)||(17052445-17052524)
chr4 (192-271)||(18211604-18211683)
chr4 (192-256)||(30145783-30145847)
chr4 (192-271)||(13813832-13813911)
chr4 (192-271)||(13818320-13818399)
chr4 (192-271)||(15223546-15223625)
chr4 (192-271)||(49549082-49549162)
chr4 (192-271)||(20158447-20158526)
chr4 (192-271)||(20163898-20163977)
chr4 (192-271)||(23996966-23997044)
chr4 (98-150)||(13452110-13452162)
chr4 (195-271)||(20161123-20161199)
chr4 (192-271)||(4562773-4562852)
chr4 (192-271)||(5758455-5758534)
chr4 (192-271)||(9555069-9555148)
chr4 (192-271)||(12486271-12486350)
chr4 (192-271)||(14758991-14759070)
chr4 (192-271)||(14955759-14955838)
chr4 (192-271)||(17807054-17807133)
chr4 (192-271)||(33740836-33740915)
chr4 (197-271)||(25688447-25688521)
chr4 (101-150)||(37881282-37881331)
chr4 (117-150)||(13452156-13452189)
chr4 (191-271)||(38106945-38107025)
chr4 (340-385)||(30146219-30146265)
chr4 (109-149)||(10977225-10977265)
chr4 (191-235)||(14047317-14047361)
[»] scaffold0016 (3 HSPs)
scaffold0016 (218-363)||(173133-173278)
scaffold0016 (155-197)||(173282-173324)
scaffold0016 (340-385)||(173082-173127)
[»] scaffold0679 (1 HSPs)
scaffold0679 (221-385)||(3151-3315)
[»] scaffold0815 (1 HSPs)
scaffold0815 (175-385)||(1-203)
[»] scaffold0001 (4 HSPs)
scaffold0001 (251-366)||(175425-175540)
scaffold0001 (155-218)||(163705-163768)
scaffold0001 (276-385)||(163487-163594)
scaffold0001 (205-249)||(163589-163633)
[»] scaffold0380 (1 HSPs)
scaffold0380 (191-271)||(3973-4053)
[»] scaffold0139 (1 HSPs)
scaffold0139 (191-271)||(23937-24017)
[»] scaffold0029 (1 HSPs)
scaffold0029 (191-271)||(62839-62919)
[»] scaffold0013 (1 HSPs)
scaffold0013 (191-271)||(74331-74411)
[»] scaffold1427 (1 HSPs)
scaffold1427 (192-271)||(200-279)
[»] scaffold0575 (1 HSPs)
scaffold0575 (192-271)||(6960-7039)
[»] scaffold0337 (1 HSPs)
scaffold0337 (192-271)||(10821-10900)
[»] scaffold0098 (3 HSPs)
scaffold0098 (155-267)||(34025-34129)
scaffold0098 (312-385)||(34128-34201)
scaffold0098 (98-150)||(52853-52905)
[»] scaffold0031 (1 HSPs)
scaffold0031 (192-271)||(37202-37281)
[»] scaffold0026 (1 HSPs)
scaffold0026 (192-271)||(109601-109680)
[»] scaffold0012 (1 HSPs)
scaffold0012 (192-271)||(224142-224221)
[»] scaffold0124 (2 HSPs)
scaffold0124 (192-266)||(25572-25646)
scaffold0124 (193-235)||(37568-37610)
[»] scaffold0599 (2 HSPs)
scaffold0599 (205-346)||(4134-4275)
scaffold0599 (159-212)||(4003-4056)
[»] scaffold0109 (1 HSPs)
scaffold0109 (191-271)||(37197-37277)
[»] scaffold0842 (1 HSPs)
scaffold0842 (192-271)||(5242-5321)
[»] scaffold0080 (2 HSPs)
scaffold0080 (192-271)||(28472-28551)
scaffold0080 (192-271)||(33937-34016)
[»] scaffold0544 (1 HSPs)
scaffold0544 (192-271)||(3516-3595)
[»] scaffold0327 (1 HSPs)
scaffold0327 (192-271)||(18823-18902)
[»] scaffold0142 (1 HSPs)
scaffold0142 (192-271)||(8739-8818)
[»] scaffold0015 (1 HSPs)
scaffold0015 (312-385)||(208662-208735)
[»] scaffold1852 (1 HSPs)
scaffold1852 (192-266)||(825-899)
[»] scaffold0410 (1 HSPs)
scaffold0410 (192-256)||(14844-14908)
[»] scaffold0486 (1 HSPs)
scaffold0486 (192-271)||(8577-8656)
[»] scaffold0166 (1 HSPs)
scaffold0166 (192-271)||(11059-11138)
[»] scaffold0355 (1 HSPs)
scaffold0355 (98-148)||(1656-1706)
[»] scaffold0200 (1 HSPs)
scaffold0200 (192-266)||(10767-10841)
[»] scaffold0141 (1 HSPs)
scaffold0141 (192-266)||(15579-15653)
[»] scaffold0293 (1 HSPs)
scaffold0293 (214-271)||(21339-21396)
[»] scaffold1584 (1 HSPs)
scaffold1584 (98-150)||(229-281)
[»] scaffold0106 (1 HSPs)
scaffold0106 (98-150)||(38311-38363)
[»] scaffold0076 (2 HSPs)
scaffold0076 (98-150)||(30360-30412)
scaffold0076 (98-150)||(35761-35813)
[»] scaffold0011 (1 HSPs)
scaffold0011 (98-150)||(174776-174828)
[»] scaffold0003 (1 HSPs)
scaffold0003 (192-256)||(70755-70819)
[»] scaffold0372 (1 HSPs)
scaffold0372 (192-271)||(6320-6399)
[»] scaffold0349 (1 HSPs)
scaffold0349 (192-271)||(11051-11130)
[»] scaffold0157 (1 HSPs)
scaffold0157 (192-271)||(34127-34206)
[»] scaffold0034 (2 HSPs)
scaffold0034 (99-150)||(10322-10373)
scaffold0034 (99-150)||(17618-17669)
[»] scaffold0028 (3 HSPs)
scaffold0028 (192-271)||(60325-60404)
scaffold0028 (98-150)||(52599-52651)
scaffold0028 (98-150)||(47194-47245)
[»] scaffold0525 (1 HSPs)
scaffold0525 (192-241)||(5560-5609)
[»] scaffold0348 (1 HSPs)
scaffold0348 (98-150)||(2828-2881)
[»] scaffold0326 (1 HSPs)
scaffold0326 (99-148)||(609-658)
[»] scaffold0188 (1 HSPs)
scaffold0188 (99-148)||(31791-31840)
[»] scaffold0104 (5 HSPs)
scaffold0104 (98-150)||(25947-25999)
scaffold0104 (117-150)||(25993-26026)
scaffold0104 (117-150)||(27375-27408)
scaffold0104 (117-149)||(26020-26052)
scaffold0104 (117-149)||(27402-27434)
[»] scaffold0023 (1 HSPs)
scaffold0023 (192-256)||(11777-11841)
[»] scaffold0299 (1 HSPs)
scaffold0299 (192-255)||(5826-5888)
[»] scaffold0120 (1 HSPs)
scaffold0120 (98-149)||(5346-5397)
[»] scaffold0061 (1 HSPs)
scaffold0061 (192-271)||(68555-68634)
[»] scaffold0066 (1 HSPs)
scaffold0066 (340-385)||(48112-48158)
[»] scaffold0420 (1 HSPs)
scaffold0420 (98-150)||(9912-9964)


Alignment Details
Target: chr8 (Bit Score: 171; Significance: 1e-91; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 155 - 385
Target Start/End: Complemental strand, 21968108 - 21967878
Alignment:
Q  155 cactcaataataattcttcttaacatccccttaatgctcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcat 254  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  21968108 cactcaataataattcttcttaacatccccttagtgctcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 21968009  T
Q  255 aggtaacatcatataatatcctaacaaccccacattcaacacgataaaagatcattgtaacctcgtcatactcttcaacataaagaacgtaagcgtacac 354  Q
    |||||||||||| ||||||| |||||||| |||||||||| | ||||||||||||  |||||||||||||||| |||||||||| || |||||  |||||    
T  21968008 aggtaacatcatgtaatatcataacaacctcacattcaaccctataaaagatcatcataacctcgtcatactcatcaacataaacaatgtaagattacac 21967909  T
Q  355 cacctcttataagcaacaacaaagtaagagt 385  Q
    |||||||||||| ||||||||||||||||||    
T  21967908 cacctcttataaacaacaacaaagtaagagt 21967878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 155 - 385
Target Start/End: Complemental strand, 21980948 - 21980718
Alignment:
Q  155 cactcaataataattcttcttaacatccccttaatgctcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcat 254  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  21980948 cactcaataataattcttcttaacatccccttagtgctcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 21980849  T
Q  255 aggtaacatcatataatatcctaacaaccccacattcaacacgataaaagatcattgtaacctcgtcatactcttcaacataaagaacgtaagcgtacac 354  Q
    |||||||||||| ||||||| |||||||| |||||||||| | |||||| |||||  |||||||||||||||| |||||||||| || ||||| ||||||    
T  21980848 aggtaacatcatgtaatatcataacaacctcacattcaaccctataaaaaatcatcataacctcgtcatactcatcaacataaacaatgtaagagtacac 21980749  T
Q  355 cacctcttataagcaacaacaaagtaagagt 385  Q
    |||||||||||| ||||||||||||||||||    
T  21980748 cacctcttataaacaacaacaaagtaagagt 21980718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 155 - 385
Target Start/End: Complemental strand, 21985931 - 21985701
Alignment:
Q  155 cactcaataataattcttcttaacatccccttaatgctcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcat 254  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  21985931 cactcaataataattcttcttaacatccccttagtgctcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 21985832  T
Q  255 aggtaacatcatataatatcctaacaaccccacattcaacacgataaaagatcattgtaacctcgtcatactcttcaacataaagaacgtaagcgtacac 354  Q
    |||||||||||| ||||||| |||||||| |||||||||| | |||||| |||||  |||||||||||||||| |||||||||| || ||||| ||||||    
T  21985831 aggtaacatcatgtaatatcataacaacctcacattcaaccctataaaatatcatcataacctcgtcatactcatcaacataaacaatgtaagagtacac 21985732  T
Q  355 cacctcttataagcaacaacaaagtaagagt 385  Q
    |||||||||||| ||||||||||||||||||    
T  21985731 cacctcttataaacaacaacaaagtaagagt 21985701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 155 - 385
Target Start/End: Complemental strand, 22009312 - 22009082
Alignment:
Q  155 cactcaataataattcttcttaacatccccttaatgctcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcat 254  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  22009312 cacttaataataattcttcttaacatccccttagtgctcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 22009213  T
Q  255 aggtaacatcatataatatcctaacaaccccacattcaacacgataaaagatcattgtaacctcgtcatactcttcaacataaagaacgtaagcgtacac 354  Q
    |||||||||||| ||||||| |||||||| |||||||||| | ||||||||||||  |||||||||||||||| |||||||||| |||||||| ||||||    
T  22009212 aggtaacatcatgtaatatcataacaacctcacattcaaccctataaaagatcatcataacctcgtcatactcatcaacataaacaacgtaagagtacac 22009113  T
Q  355 cacctcttataagcaacaacaaagtaagagt 385  Q
    |||||||||||   |||||||||||||||||    
T  22009112 cacctcttatagataacaacaaagtaagagt 22009082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 155 - 384
Target Start/End: Complemental strand, 44494331 - 44494110
Alignment:
Q  155 cactcaataataattcttcttaacatccccttaatgctcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcat 254  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||        |||||||| |||||||||||||||||||||||||    
T  44494331 cactcaataataattattcttaacatccccttagtgctcatgaatagaagacaactta--------acataaccatcatcaagtacatttaacaattcat 44494240  T
Q  255 aggtaacatcatataatatcctaacaaccccacattcaacacgataaaagatcattgtaacctcgtcatactcttcaacataaagaacgtaagcgtacac 354  Q
    |||||||||||| ||||||| |||||||| |||||||||||| ||| ||||||||  |||||||||||||||| |||||||||| |||||||| ||||||    
T  44494239 aggtaacatcatgtaatatcataacaacctcacattcaacactatagaagatcatcataacctcgtcatactcatcaacataaacaacgtaagagtacac 44494140  T
Q  355 cacctcttataagcaacaacaaagtaagag 384  Q
    |||||||||||  |||||||||||||||||    
T  44494139 cacctcttatagacaacaacaaagtaagag 44494110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 176 - 385
Target Start/End: Complemental strand, 22000873 - 22000669
Alignment:
Q  176 aacatccccttaatgctcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataatatcc 275  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||     
T  22000873 aacatccccttagtgctcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaactcataggtaacatcatgtaatatca 22000774  T
Q  276 taacaaccccacattcaacacgataaaagatcattgtaacctcgtcatactcttcaacataaagaacgtaagcgtacaccacctcttataagcaacaaca 375  Q
    |||||||| |||||      | ||||||||||||  |||||| ||||||||| |||||||||| || ||||| |||||||||||||||||| ||||||||    
T  22000773 taacaacctcacat-----cctataaaagatcatcataacctagtcatactcatcaacataaacaatgtaagagtacaccacctcttataaacaacaaca 22000679  T
Q  376 aagtaagagt 385  Q
    ||||||||||    
T  22000678 aagtaagagt 22000669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 192 - 366
Target Start/End: Original strand, 11774296 - 11774470
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataatatcctaacaaccccacattc 291  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||| ||||||| ||||||||||||||||    
T  11774296 tcatgaataaaagacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaatatcataacaaccccacattc 11774395  T
Q  292 aacacgataaaagatcattgtaacctcgtcatactcttcaacataaagaacgtaagcgtacaccacctcttataa 366  Q
    ||||  ||||||||||||  |||||||||||||||| |||||||||| |||||||| ||||||||||||||||||    
T  11774396 aacatcataaaagatcatcataacctcgtcatactcatcaacataaacaacgtaagagtacaccacctcttataa 11774470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 192 - 366
Target Start/End: Complemental strand, 8415055 - 8414881
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataatatcctaacaaccccacattc 291  Q
    ||||||||| |||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||| |||| ||||||| |||||||||||||||     
T  8415055 tcatgaataaaagacaacttatcaacttaaaataaccctaatcaagtacatttaacaactcataggtaacctcatgtaatatcataacaaccccacattt 8414956  T
Q  292 aacacgataaaagatcattgtaacctcgtcatactcttcaacataaagaacgtaagcgtacaccacctcttataa 366  Q
    ||||  ||||||||||||  |||||||||||||||| |||||||||| |||||||| ||||||||||||||||||    
T  8414955 aacatcataaaagatcatcataacctcgtcatactcatcaacataaacaacgtaagagtacaccacctcttataa 8414881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 205 - 385
Target Start/End: Original strand, 21328579 - 21328757
Alignment:
Q  205 acaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataatatcctaacaaccccacattcaacacgataaaag 304  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||| ||| ||| |||||||| |||||||||||| |||||      
T  21328579 acaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcatgtaacatcataacaacctcacattcaacactataaaca 21328678  T
Q  305 atcattgtaacctcgtcatactcttcaacataaagaacgtaagcgtacaccacctcttataagcaacaacaaagtaagagt 385  Q
    |||||  |||| |||||||| || |||||||||| |||||||| ||||||||||||||||||  ||| |||||||||||||    
T  21328679 atcatcataacatcgtcataatcatcaacataaaaaacgtaagagtacaccacctcttataa--aacgacaaagtaagagt 21328757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 155 - 385
Target Start/End: Complemental strand, 11252190 - 11251973
Alignment:
Q  155 cactcaataataattcttcttaacatccccttaatgctcatgaa-tagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattca 253  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||        |||||||| |||||||||||||||||||| |||    
T  11252190 cactcaataataattcttcttaacatccccttagtgctcatgaaatagaagacaactta--------acataacc-tcatcaagtacatttaacaactca 11252100  T
Q  254 taggtaacatcatataatatcctaacaaccccacattcaacacgataaaagatcattgtaacctcgtcatactcttcaacataaagaacgtaagcgtaca 353  Q
    ||||||||||||||| ||| ||     ||| |||||||||||| ||| ||||||||  |||||||||||||||| ||||||||||  ||||||| |||||    
T  11252099 taggtaacatcatatcataacc-----acctcacattcaacactatagaagatcatcataacctcgtcatactcatcaacataaaccacgtaagagtaca 11252005  T
Q  354 ccacctcttataagcaacaacaaagtaagagt 385  Q
    |||||||| |||  ||||||||  ||||||||    
T  11252004 ccacctctcatagacaacaacagggtaagagt 11251973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 229 - 385
Target Start/End: Original strand, 34950123 - 34950279
Alignment:
Q  229 ctcatcaagtacatttaacaattcataggtaacatcatataatatcctaacaaccccacattcaacacgataaaagatcattgtaacctcgtcatactct 328  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||  ||||||| |||||||||||| ||| ||||||||  ||||||||||||||||     
T  34950123 ctcatcaagtacatttaacaactcataggtaacatcatgtaatatcagaacaacctcacattcaacactatataagatcatcataacctcgtcatactca 34950222  T
Q  329 tcaacataaagaacgtaagcgtacaccacctcttataagcaacaacaaagtaagagt 385  Q
    |||||||||| |||||||| |||||||||||||||||  |||||| |||| ||||||    
T  34950223 tcaacataaacaacgtaagagtacaccacctcttatagacaacaataaagaaagagt 34950279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 205 - 374
Target Start/End: Complemental strand, 42560947 - 42560778
Alignment:
Q  205 acaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataatatcctaacaaccccacattcaacacgataaaag 304  Q
    ||||||| ||||||||||||||||  ||||| ||||||||||||| |||||| ||||||||| ||| |||  |||| || | |||||||||| |||||      
T  42560947 acaacttgtcaacttaacataaccaccatcacgtacatttaacaactcatagataacatcatgtaacatcaaaacagcctctcattcaacactataaaca 42560848  T
Q  305 atcattgtaacctcgtcatactcttcaacataaagaacgtaagcgtacaccacctcttataagcaacaac 374  Q
    |||||  || | |||||||| || |||||||||| |||||||| |||||||||||||||||| |||||||    
T  42560847 atcatcatagcatcgtcataatcatcaacataaacaacgtaagagtacaccacctcttataaacaacaac 42560778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 191 - 271
Target Start/End: Original strand, 21386158 - 21386238
Alignment:
Q  191 ctcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||| ||||||||| ||||    
T  21386158 ctcatgaatagaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcctagataacatcatgtaat 21386238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 23427826 - 23427905
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||| |||||| ||||||||| ||||    
T  23427826 tcatgaataaaagacaacttatcaacttaacataaccatcattaagtacatttaacaactcatagataacatcatgtaat 23427905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 23913265 - 23913344
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| | |||| ||||||||| ||||    
T  23913265 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaacttatagataacatcatgtaat 23913344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 44385912 - 44385833
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| ||||||||||||||| ||||||||| | |||||||||||||||||||| |||||| ||||||||| ||||    
T  44385912 tcatgaataaaagacaacttatcaagttaacataatcatcatcaagtacatttaacaactcatagataacatcatgtaat 44385833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 14399171 - 14399092
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| ||||||||||||||||||||||||| | |||||||||||| ||||||| |||||| || |||||| ||||    
T  14399171 tcatgaataaaagacaacttatcaacttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 14399092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 159 - 212
Target Start/End: Complemental strand, 42561078 - 42561025
Alignment:
Q  159 caataataattcttcttaacatccccttaatgctcatgaatagaagacaactta 212  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  42561078 caataataattcttcttaacatccccttagtactcatgaatagaagacaactta 42561025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 98 - 150
Target Start/End: Original strand, 3697555 - 3697607
Alignment:
Q  98 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 150  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  3697555 tatggcatttacaaccaacaacaccgactcatgcaaatgacattacaacaccg 3697607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 98 - 150
Target Start/End: Original strand, 23825007 - 23825059
Alignment:
Q  98 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 150  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  23825007 tatggcatttacaaccaacaacaccaactcatgcaaatgacatgacaacaccg 23825059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 192 - 256
Target Start/End: Complemental strand, 27942764 - 27942700
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcatag 256  Q
    ||||||||| |||||||||||| |||||| ||||||| |||||||||||||||||||| ||||||    
T  27942764 tcatgaataaaagacaacttattaacttatcataaccatcatcaagtacatttaacaactcatag 27942700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 192 - 266
Target Start/End: Complemental strand, 18864183 - 18864109
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcat 266  Q
    ||||||||| ||||||||||||||| ||||||||| | |||||||||||| ||||||| |||||| || ||||||    
T  18864183 tcatgaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcat 18864109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 192 - 249
Target Start/End: Original strand, 363268 - 363325
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaa 249  Q
    ||||||||| |||||||||||||| |||||||||||| ||| ||||||||||||||||    
T  363268 tcatgaataaaagacaacttatcatcttaacataaccatcaacaagtacatttaacaa 363325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 21409900 - 21409980
Alignment:
Q  192 tcatgaatagaagacaacttatcaactt-aacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||| |||| |||||||||||||||||| ||||||||| |||||||||||| ||||||| |||||| || |||||| ||||    
T  21409900 tcattaataaaagacaacttatcaactttaacataaccatcatcaagtacacttaacaactcatagatatcatcatgtaat 21409980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 21804392 - 21804472
Alignment:
Q  192 tcatgaatagaagacaacttatcaactt-aacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||| |||| |||||||||||||||||| ||||||||| |||||||||||| ||||||| |||||| || |||||| ||||    
T  21804392 tcattaataaaagacaacttatcaactttaacataaccatcatcaagtacacttaacaactcatagatatcatcatgtaat 21804472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 194 - 266
Target Start/End: Complemental strand, 30941641 - 30941569
Alignment:
Q  194 atgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcat 266  Q
    ||||||| ||||||||||||||| ||||||||| | |||||||||||| ||||||| |||||| || ||||||    
T  30941641 atgaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcat 30941569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 21974262 - 21974183
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||| |||| ||||||||||||||| ||||||||| | |||||||||||| ||||||| |||||| || |||||| ||||    
T  21974262 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 21974183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 43250202 - 43250281
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||| |||| ||||||||||||||| ||||||||| | |||||||||||| ||||||| |||||| || |||||| ||||    
T  43250202 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 43250281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 192 - 266
Target Start/End: Complemental strand, 21829539 - 21829465
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcat 266  Q
    |||| |||| ||||||||||||||| ||||||||| | |||||||||||| ||||||| |||||| || ||||||    
T  21829539 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcat 21829465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 109 - 149
Target Start/End: Original strand, 23653773 - 23653813
Alignment:
Q  109 caaccaataacaccgactcatgcaaatgacatgacaacacc 149  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  23653773 caaccaacaacaccgactcatgcaaatgacatgacaacacc 23653813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 98 - 150
Target Start/End: Complemental strand, 30767216 - 30767164
Alignment:
Q  98 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 150  Q
    |||||||  ||||||||| |||||||||||||||||||||||| |||||||||    
T  30767216 tatggcaactacaaccaacaacaccgactcatgcaaatgacataacaacaccg 30767164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 192 - 235
Target Start/End: Complemental strand, 8729688 - 8729645
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatca 235  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||    
T  8729688 tcatgaataaaagacaacttatcaacttaacataaccatcatca 8729645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 21978372 - 21978293
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||| |||| |||||||||||||||  |||||||| | |||||||||||| ||||||| |||||| || |||||| ||||    
T  21978372 tcattaataaaagacaacttatcaatataacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 21978293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 155 - 198
Target Start/End: Original strand, 34950057 - 34950100
Alignment:
Q  155 cactcaataataattcttcttaacatccccttaatgctcatgaa 198  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||    
T  34950057 cactcaataataattcttcttaacatcccattagtgctcatgaa 34950100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 266
Target Start/End: Original strand, 22110601 - 22110675
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcat 266  Q
    |||| |||| ||||||||||||||| |||||||||   |||||||||||| ||||||| |||||| || ||||||    
T  22110601 tcattaataaaagacaacttatcaatttaacataaaaatcatcaagtacacttaacaactcatagatatcatcat 22110675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 107 - 148
Target Start/End: Complemental strand, 31418951 - 31418910
Alignment:
Q  107 tacaaccaataacaccgactcatgcaaatgacatgacaacac 148  Q
    ||||||||| || |||||||||||||||||||||||||||||    
T  31418951 tacaaccaacaagaccgactcatgcaaatgacatgacaacac 31418910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 150
Target Start/End: Original strand, 5239975 - 5240015
Alignment:
Q  110 aaccaataacaccgactcatgcaaatgacatgacaacaccg 150  Q
    |||||| || |||||||||||||||||||||||||||||||    
T  5239975 aaccaacaaaaccgactcatgcaaatgacatgacaacaccg 5240015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 150
Target Start/End: Original strand, 23825053 - 23825086
Alignment:
Q  117 aacaccgactcatgcaaatgacatgacaacaccg 150  Q
    |||||||||||||||||| |||||||||||||||    
T  23825053 aacaccgactcatgcaaacgacatgacaacaccg 23825086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 120 - 148
Target Start/End: Complemental strand, 31412756 - 31412728
Alignment:
Q  120 accgactcatgcaaatgacatgacaacac 148  Q
    |||||||||||||||||||||||||||||    
T  31412756 accgactcatgcaaatgacatgacaacac 31412728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 155; Significance: 3e-82; HSPs: 62)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 155 - 385
Target Start/End: Original strand, 16185487 - 16185717
Alignment:
Q  155 cactcaataataattcttcttaacatccccttaatgctcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcat 254  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| ||||    
T  16185487 cactcaatattaattcttcttaacatccccttagtgctcatgaatagaagacgacttatcaacttaacatgaccctcatcaagtacatttaacaactcat 16185586  T
Q  255 aggtaacatcatataatatcctaacaaccccacattcaacacgataaaagatcattgtaacctcgtcatactcttcaacataaagaacgtaagcgtacac 354  Q
    |||||||||||| ||||||| |||||||| |||||||||||| ||| ||||||||  |||||||||||||||| |||||||||  |||||||| ||||||    
T  16185587 aggtaacatcatgtaatatcataacaacctcacattcaacactatagaagatcatcataacctcgtcatactcatcaacataaccaacgtaagagtacac 16185686  T
Q  355 cacctcttataagcaacaacaaagtaagagt 385  Q
    ||||||| |||  ||||||||||||||||||    
T  16185687 cacctctcatagacaacaacaaagtaagagt 16185717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 192 - 366
Target Start/End: Original strand, 41283645 - 41283819
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataatatcctaacaaccccacattc 291  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||| ||||||||||||||||    
T  41283645 tcatgaataaaagacaacttatcaacttaacataaccctcatcaagtacatttaacaactcataggtaacctcatgtaatatcataacaaccccacattc 41283744  T
Q  292 aacacgataaaagatcattgtaacctcgtcatactcttcaacataaagaacgtaagcgtacaccacctcttataa 366  Q
    ||||  ||||||||||||  |||||||||||||||| |||||||||| |||||||| ||||||||||||||||||    
T  41283745 aacatcataaaagatcatcataacctcgtcatactcatcaacataaacaacgtaagagtacaccacctcttataa 41283819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 158 - 385
Target Start/End: Complemental strand, 11394983 - 11394764
Alignment:
Q  158 tcaataataattcttcttaacatccccttaatgctcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcatagg 257  Q
    |||||||||||||| |||||||| | |||| ||||||||||||||||        ||||||||||||||||||||||||||||||||||||| |||||||    
T  11394983 tcaataataattctccttaacattctcttagtgctcatgaatagaag--------tcaacttaacataaccctcatcaagtacatttaacaactcatagg 11394892  T
Q  258 taacatcatataatatcctaacaaccccacattcaacacgataaaagatcattgtaacctcgtcatactcttcaacataaagaacgtaagcgtacaccac 357  Q
    |||| |||| ||||||| |||||||| | |||||||||| ||| ||||||||  |||||||||||||||| |||||||||| |||||||| |||||||||    
T  11394891 taacctcatgtaatatcataacaacctcgcattcaacactatagaagatcatcataacctcgtcatactcatcaacataaacaacgtaagagtacaccac 11394792  T
Q  358 ctcttataagcaacaacaaagtaagagt 385  Q
    ||||||||  |||||||||| |||||||    
T  11394791 ctcttatagacaacaacaaaataagagt 11394764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 205 - 374
Target Start/End: Original strand, 15213061 - 15213230
Alignment:
Q  205 acaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataatatcctaacaaccccacattcaacacgataaaag 304  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||| | ||||||||| ||| |||  |||| || | |||||||||| |||||      
T  15213061 acaacttatcaacttaacataaccatcatcaagtacatttaacaactcatggataacatcatgtaacatcaaaacagcctctcattcaacactataaaca 15213160  T
Q  305 atcattgtaacctcgtcatactcttcaacataaagaacgtaagcgtacaccacctcttataagcaacaac 374  Q
    |||||  |||| |||| ||| || |||||||||| |||||||| |||||||||||||||||| |||||||    
T  15213161 atcatcataacatcgtgataatcatcaacataaacaacgtaagagtacaccacctcttataaacaacaac 15213230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 13891630 - 13891709
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||| ||||    
T  13891630 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcatgtaat 13891709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 14420787 - 14420866
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||| |||||    
T  14420787 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcacataat 14420866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 16005004 - 16005083
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||| |||||    
T  16005004 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcacataat 16005083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 18606338 - 18606417
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||| |||||    
T  18606338 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcacataat 18606417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 18871297 - 18871376
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||| |||||    
T  18871297 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcacataat 18871376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 20486742 - 20486821
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||| ||||    
T  20486742 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcatgtaat 20486821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 192 - 264
Target Start/End: Original strand, 146500 - 146572
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatc 264  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||    
T  146500 tcatgagtagaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatc 146572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 7520294 - 7520215
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||| |||||| ||||||||| ||||    
T  7520294 tcatgaataaaagacaacttatcaacttaacataatcatcatcaagtacatttaacaactcatagataacatcatgtaat 7520215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 10607399 - 10607320
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||||| || ||||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||| ||||    
T  10607399 tcatgactaaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcatgtaat 10607320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 10897975 - 10897896
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| | |||||| |||||||| |||||    
T  10897975 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacgactcatagataacatcacataat 10897896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 11660282 - 11660361
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||||| |||||| ||||||||| ||||    
T  11660282 tcatgaataaaagacaacttaccaacttaacataaccatcatcaagtacatttaacaactcatagataacatcatgtaat 11660361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 39268392 - 39268313
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||| ||||    
T  39268392 tcatgaataaaaggcaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcatgtaat 39268313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 202 - 271
Target Start/End: Original strand, 13892023 - 13892092
Alignment:
Q  202 aagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||| ||||    
T  13892023 aagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcatgtaat 13892092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 192 - 256
Target Start/End: Complemental strand, 838212 - 838148
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcatag 256  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  838212 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcatag 838148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 192 - 256
Target Start/End: Complemental strand, 1203392 - 1203328
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcatag 256  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  1203392 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcatag 1203328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 9752586 - 9752507
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| ||| ||||||||||||||||||||||| ||| |||||||||||||||| |||||| ||||||||| ||||    
T  9752586 tcatgaataaaaggcaacttatcaacttaacataaccatcaccaagtacatttaacaactcatagataacatcatgtaat 9752507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 18424235 - 18424314
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||| |||||| ||| ||||| ||||    
T  18424235 tcatgaataaaagacaacttatcaacttaacataaacatcatcaagtacatttaacaactcatagataatatcatgtaat 18424314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 25928450 - 25928371
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| || |||||||||||||||||||||||| |||| ||||||||||||||| |||||| ||||||||| ||||    
T  25928450 tcatgaataaaaaacaacttatcaacttaacataaccatcataaagtacatttaacaactcatagataacatcatgtaat 25928371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 192 - 264
Target Start/End: Complemental strand, 1860100 - 1860028
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatc 264  Q
    ||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||| |||||  |||||||    
T  1860100 tcatgaataaaagacaacttatcaacttaacataaacgtcatcaagtacatttaacaactcatatataacatc 1860028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 192 - 264
Target Start/End: Complemental strand, 13919491 - 13919419
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatc 264  Q
    ||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||| |||||  |||||||    
T  13919491 tcatgaataaaagacaacttatcaacttaacataaacgtcatcaagtacatttaacaactcatatataacatc 13919419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 192 - 256
Target Start/End: Complemental strand, 16110054 - 16109990
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcatag 256  Q
    ||||||||| |||| |||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  16110054 tcatgaataaaagataacttatcaacttaacataaccatcatcaagtacatttaacaactcatag 16109990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 26291156 - 26291236
Alignment:
Q  192 tcatgaatagaagacaacttatcaactt-aacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| |||||||||||||||||| ||||||||| |||||||||||| ||||||| |||||| ||||||||| ||||    
T  26291156 tcatgaataaaagacaacttatcaactttaacataaccatcatcaagtacacttaacaactcatagataacatcatgtaat 26291236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 39721195 - 39721275
Alignment:
Q  192 tcatgaatagaagacaacttatcaactt-aacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||| |||||| || |||||| ||||    
T  39721195 tcatgaataaaagacaacttatcaactttaacataaccatcatcaagtacatttaacaactcatagatatcatcatgtaat 39721275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 2833560 - 2833481
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| ||||||||||||||||||||||||| | |||||||||||| ||||||| |||||| || |||||| ||||    
T  2833560 tcatgaataaaagacaacttatcaacttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 2833481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 16582421 - 16582500
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||| | ||||||||||||||||||| ||||||| |||||||||||||||||||| |||||  ||||||||| ||||    
T  16582421 tcatgaaaaaaagacaacttatcaacttatcataaccatcatcaagtacatttaacaactcataaataacatcatgtaat 16582500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 192 - 256
Target Start/End: Complemental strand, 834124 - 834060
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcatag 256  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||| | ||||||| ||||||    
T  834124 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtagaattaacaactcatag 834060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 192 - 256
Target Start/End: Complemental strand, 1199304 - 1199240
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcatag 256  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||| | ||||||| ||||||    
T  1199304 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtagaattaacaactcatag 1199240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 98 - 150
Target Start/End: Original strand, 32771378 - 32771430
Alignment:
Q  98 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 150  Q
    ||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  32771378 tatggcaattacaaccaacaacaccgactcatgcaaatgacatgacaacaccg 32771430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 192 - 266
Target Start/End: Complemental strand, 72450 - 72376
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcat 266  Q
    |||| |||| ||||||||||||||| ||||||||| | |||||||||||| |||||||||||||| || ||||||    
T  72450 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaattcatagatatcatcat 72376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 192 - 266
Target Start/End: Complemental strand, 76559 - 76485
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcat 266  Q
    |||| |||| ||||||||||||||| ||||||||| | |||||||||||| |||||||||||||| || ||||||    
T  76559 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaattcatagatatcatcat 76485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 192 - 266
Target Start/End: Complemental strand, 45171579 - 45171505
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcat 266  Q
    ||||||||| ||||||||||||||| ||||||||| | |||||||||||| ||||||| |||||| || ||||||    
T  45171579 tcatgaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcat 45171505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 98 - 150
Target Start/End: Original strand, 4279873 - 4279925
Alignment:
Q  98 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 150  Q
    |||||||  ||||||||| ||||||||||||||||||||||||||||||||||    
T  4279873 tatggcaactacaaccaacaacaccgactcatgcaaatgacatgacaacaccg 4279925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 15083225 - 15083305
Alignment:
Q  192 tcatgaatagaagacaacttatcaactt-aacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| ||||||||||||||| || ||||||||| |||||||||||| ||||||| |||||| || |||||| ||||    
T  15083225 tcatgaataaaagacaacttatcaattttaacataaccatcatcaagtacacttaacaactcatagatatcatcatgtaat 15083305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 98 - 150
Target Start/End: Original strand, 19616205 - 19616257
Alignment:
Q  98 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 150  Q
    |||||||  ||||||||| ||||||||||||||||||||||||||||||||||    
T  19616205 tatggcaactacaaccaacaacaccgactcatgcaaatgacatgacaacaccg 19616257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 31725 - 31804
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||| |||| ||||||||||||||| ||||||||| | |||||||||||| ||||||| |||||| || |||||| ||||    
T  31725 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 31804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 2531410 - 2531332
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| ||||||||||||||||||||||||| | ||||||||||||  |||||| |||||| || | |||||||||    
T  2531410 tcatgaataaaagacaacttatcaacttaacataa-catcatcaagtacacctaacaactcatagatatcttcatataat 2531332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 12706201 - 12706122
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||| |||| ||||||||||||||| ||||||||| | |||||||||||| ||||||| |||||| || |||||| ||||    
T  12706201 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 12706122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 12713540 - 12713619
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||| |||| ||||||||||||||| ||||||||| | |||||||||||| ||||||| |||||| || |||||| ||||    
T  12713540 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 12713619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 12722198 - 12722277
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||| |||| ||||||||||||||| ||||||||| | |||||||||||| ||||||| |||||| || |||||| ||||    
T  12722198 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 12722277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 16908588 - 16908509
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||| |||| ||||||||||||||| ||||||||| | |||||||||||| ||||||| |||||| || |||||| ||||    
T  16908588 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 16908509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 18281958 - 18282037
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||| |||| ||||||||||||||| ||||||||| | |||||||||||| ||||||| |||||| || |||||| ||||    
T  18281958 tcatcaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 18282037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 192 - 266
Target Start/End: Original strand, 18277994 - 18278068
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcat 266  Q
    |||| |||| ||||||||||||||| ||||||||| | |||||||||||| ||||||| |||||| || ||||||    
T  18277994 tcatcaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcat 18278068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 212
Target Start/End: Original strand, 15212930 - 15212983
Alignment:
Q  159 caataataattcttcttaacatccccttaatgctcatgaatagaagacaactta 212  Q
    ||||||||||||||||||||||||||||| | ||||||||| || |||||||||    
T  15212930 caataataattcttcttaacatccccttagtactcatgaattgaggacaactta 15212983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 271
Target Start/End: Original strand, 18301373 - 18301430
Alignment:
Q  214 caacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||||||||| |||||||||||||||||||| || ||| ||||||||| ||||    
T  18301373 caacttaacataaccatcatcaagtacatttaacaactcctagataacatcatgtaat 18301430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 103 - 148
Target Start/End: Complemental strand, 18958717 - 18958672
Alignment:
Q  103 catttacaaccaataacaccgactcatgcaaatgacatgacaacac 148  Q
    ||||||||||||| || |||||||||||||||||||||||||||||    
T  18958717 catttacaaccaacaataccgactcatgcaaatgacatgacaacac 18958672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 106 - 150
Target Start/End: Complemental strand, 26295021 - 26294977
Alignment:
Q  106 ttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 150  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||    
T  26295021 ttacaaccaacaacaccgactcatgcaaatgacatgactacaccg 26294977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 12717287 - 12717366
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||| |||| ||||||||||||||| ||||||||| | ||| |||||||| ||||||| |||||| || |||||| ||||    
T  12717287 tcattaataaaagacaacttatcaatttaacataaacatcagcaagtacacttaacaactcatagatatcatcatgtaat 12717366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 192 - 235
Target Start/End: Original strand, 15166250 - 15166293
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatca 235  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||    
T  15166250 tcatgaataaaagacaacttatcaacttaacataaccatcatca 15166293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 107 - 150
Target Start/End: Complemental strand, 37244592 - 37244549
Alignment:
Q  107 tacaaccaataacaccgactcatgcaaatgacatgacaacaccg 150  Q
    ||||||||| || |||||||||||||||||||||||||||||||    
T  37244592 tacaaccaacaagaccgactcatgcaaatgacatgacaacaccg 37244549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 11302308 - 11302350
Alignment:
Q  193 catgaatagaagacaacttatcaacttaacataaccctcatca 235  Q
    |||||||| ||||||||||||||||||||||||||| ||||||    
T  11302308 catgaataaaagacaacttatcaacttaacataaccatcatca 11302350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 148
Target Start/End: Complemental strand, 15086215 - 15086165
Alignment:
Q  98 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacac 148  Q
    ||||||| | |||||||| ||||||||||||||||||||||||||| ||||    
T  15086215 tatggcaatcacaaccaacaacaccgactcatgcaaatgacatgaccacac 15086165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 146
Target Start/End: Complemental strand, 16952521 - 16952481
Alignment:
Q  106 ttacaaccaataacaccgactcatgcaaatgacatgacaac 146  Q
    |||||||||| ||||||||||||||||||||||| ||||||    
T  16952521 ttacaaccaacaacaccgactcatgcaaatgacacgacaac 16952481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 263
Target Start/End: Complemental strand, 23666531 - 23666460
Alignment:
Q  191 ctcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacat 263  Q
    |||||||||||| ||||||||| |||||  || ||||  |||||||||||||||||||| |||||| ||||||    
T  23666531 ctcatgaatagaggacaacttagcaactatacgtaaca-tcatcaagtacatttaacaactcatagataacat 23666460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 149
Target Start/End: Original strand, 32771424 - 32771456
Alignment:
Q  117 aacaccgactcatgcaaatgacatgacaacacc 149  Q
    |||||||||||||||||||||||||||||||||    
T  32771424 aacaccgactcatgcaaatgacatgacaacacc 32771456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 340 - 374
Target Start/End: Original strand, 11084832 - 11084866
Alignment:
Q  340 aacgtaagcgtacaccacctcttataagcaacaac 374  Q
    ||||||||||||||||||||||||||| |||||||    
T  11084832 aacgtaagcgtacaccacctcttataaacaacaac 11084866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 147
Target Start/End: Original strand, 3327717 - 3327758
Alignment:
Q  106 ttacaaccaataacaccgactcatgcaaatgacatgacaaca 147  Q
    |||||||| | ||||||||||||||||||||||||| |||||    
T  3327717 ttacaaccgacaacaccgactcatgcaaatgacatggcaaca 3327758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 330 - 385
Target Start/End: Complemental strand, 833673 - 833617
Alignment:
Q  330 caacataaagaacgtaagcgtacaccacctcttat-aagcaacaacaaagtaagagt 385  Q
    ||||||||| ||||| || ||||||||||| |||| || ||||||||||||||||||    
T  833673 caacataaacaacgtgagagtacaccaccttttataaaacaacaacaaagtaagagt 833617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 330 - 385
Target Start/End: Complemental strand, 1198853 - 1198797
Alignment:
Q  330 caacataaagaacgtaagcgtacaccacctcttat-aagcaacaacaaagtaagagt 385  Q
    ||||||||| ||||| || ||||||||||| |||| || ||||||||||||||||||    
T  1198853 caacataaacaacgtgagagtacaccaccttttataaaacaacaacaaagtaagagt 1198797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 143; Significance: 5e-75; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 155 - 385
Target Start/End: Complemental strand, 11810065 - 11809835
Alignment:
Q  155 cactcaataataattcttcttaacatccccttaatgctcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcat 254  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||| ||||    
T  11810065 cactcaatattaattcttcttaacatccccttaatgctcgtgaatagaagacgacttatcaacttaacatgaccctcatcaagtacatttaacaactcat 11809966  T
Q  255 aggtaacatcatataatatcctaacaaccccacattcaacacgataaaagatcattgtaacctcgtcatactcttcaacataaagaacgtaagcgtacac 354  Q
    |||||||||||| ||||||| |||||||| |||||||||||| ||| | ||||||  |||||||||||||||| |||||||||  |||||||| ||| ||    
T  11809965 aggtaacatcatgtaatatcataacaacctcacattcaacactatagatgatcatcataacctcgtcatactcatcaacataaccaacgtaagagtatac 11809866  T
Q  355 cacctcttataagcaacaacaaagtaagagt 385  Q
    ||||||| ||   ||||||||||||||||||    
T  11809865 cacctctcatggacaacaacaaagtaagagt 11809835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 155 - 385
Target Start/End: Original strand, 11944965 - 11945187
Alignment:
Q  155 cactcaataataattcttcttaacatccccttaatgctcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcat 254  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||        |||||||||||||||||||||||||||||||| || |    
T  11944965 cactcaataataattctccttaacatccccttagtgctcatgaatagaagacaac--------ttaacataaccctcatcaagtacatttaacaactcgt 11945056  T
Q  255 aggtaacatcatataatatcctaacaaccccacattcaacacgataaaagatcattgtaacctcgtcatactcttcaacataaagaacgtaagcgtacac 354  Q
    ||||||| |||| ||||||| |||||||| | |||||||||| ||| ||||||||  |||||||||||||||| |||||||||| || ||||| ||||||    
T  11945057 aggtaacctcatgtaatatcataacaacctcgcattcaacactatagaagatcatcataacctcgtcatactcatcaacataaacaaagtaagagtacac 11945156  T
Q  355 cacctcttataagcaacaacaaagtaagagt 385  Q
    |||||||||||  ||||||||||||||||||    
T  11945157 cacctcttatagacaacaacaaagtaagagt 11945187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 155 - 385
Target Start/End: Complemental strand, 43631100 - 43630878
Alignment:
Q  155 cactcaataataattcttcttaacatccccttaatgctcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcat 254  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||        ||||||||||||||||||||||||||||| || |    
T  43631100 cactcaataataattctccttaacatccccttagtgctcatgaatagaagacaactta--------acataaccctcatcaagtacatttaacaactcgt 43631009  T
Q  255 aggtaacatcatataatatcctaacaaccccacattcaacacgataaaagatcattgtaacctcgtcatactcttcaacataaagaacgtaagcgtacac 354  Q
    ||||||| |||| ||||||| |||||||| | |||||||||| ||| ||||||||  |||||||||||||||| |||||||||| || ||||| ||||||    
T  43631008 aggtaacctcatgtaatatcataacaacctcgcattcaacactatagaagatcatcataacctcgtcatactcatcaacataaacaaagtaagagtacac 43630909  T
Q  355 cacctcttataagcaacaacaaagtaagagt 385  Q
    |||||||||||  ||||||||||||||||||    
T  43630908 cacctcttatagacaacaacaaagtaagagt 43630878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 141 - 267
Target Start/End: Complemental strand, 20032297 - 20032179
Alignment:
Q  141 gacaacaccgtatgcactcaataataattcttcttaacatccccttaatgctcatgaatagaagacaacttatcaacttaacataaccctcatcaagtac 240  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||| || |||||    
T  20032297 gacatcaccatatgcactcaataataattcttcttaacatccccttaatgctcatgaatagaagacaa--------cttaacataaccctcctcgagtac 20032206  T
Q  241 atttaacaattcataggtaacatcata 267  Q
    ||||||||| |||||||||||||||||    
T  20032205 atttaacaactcataggtaacatcata 20032179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 191 - 271
Target Start/End: Original strand, 21406252 - 21406332
Alignment:
Q  191 ctcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||| ||||||||| ||||    
T  21406252 ctcatgaatagaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcctagataacatcatgtaat 21406332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 16370925 - 16371004
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||| |||||    
T  16370925 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcacataat 16371004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 22132177 - 22132098
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||| ||||    
T  22132177 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcatgtaat 22132098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 192 - 302
Target Start/End: Original strand, 29533887 - 29533998
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcatag-gtaacatcatataatatcctaacaaccccacatt 290  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||  ||||||||||| ||||||  ||||||||| ||||||| |||||||| || |||    
T  29533887 tcatgaataaaagacaacttatcaacttaacataaccatcatcaaacacatttaacaactcatagcttaacatcatgtaatatcataacaacctcatatt 29533986  T
Q  291 caacacgataaa 302  Q
    |||||| |||||    
T  29533987 caacaccataaa 29533998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 41801357 - 41801278
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||| ||||| ||||    
T  41801357 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataatatcatgtaat 41801278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 312 - 385
Target Start/End: Complemental strand, 20032180 - 20032107
Alignment:
Q  312 taacctcgtcatactcttcaacataaagaacgtaagcgtacaccacctcttataagcaacaacaaagtaagagt 385  Q
    ||||||| |||||||| |||||||||| |||||||| |||||||||||||||||  ||||||||||||||||||    
T  20032180 taacctcatcatactcatcaacataaacaacgtaagagtacaccacctcttatagacaacaacaaagtaagagt 20032107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 192 - 265
Target Start/End: Original strand, 32649067 - 32649140
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatca 265  Q
    ||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||| |||||  ||||||||    
T  32649067 tcatgaataaaagacaacttatcaacttaacataacaatcatcaagtacatttaacaactcataaataacatca 32649140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 20230218 - 20230138
Alignment:
Q  192 tcatgaatagaagacaacttatcaactt-aacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| |||||||||||||||||| ||||||||| |||||||||||| ||||||| |||||| ||||||||| ||||    
T  20230218 tcatgaataaaagacaacttatcaactttaacataaccatcatcaagtacacttaacaactcatagataacatcatgtaat 20230138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 238 - 363
Target Start/End: Complemental strand, 636596 - 636478
Alignment:
Q  238 tacatttaacaattcataggtaacatcatataatatcctaacaaccccacattcaacacgataaaagatcattgtaacctcgtcatactcttcaacataa 337  Q
    |||||||||||| ||||||||||| |||| ||||||| |||||||  | |||||||||       |||||||  |||||||||||||||| |||||||||    
T  636596 tacatttaacaactcataggtaacctcatgtaatatcataacaacatcgcattcaaca-------agatcatcataacctcgtcatactcatcaacataa 636504  T
Q  338 agaacgtaagcgtacaccacctctta 363  Q
    | || ||||| |||||||||||||||    
T  636503 acaaagtaagagtacaccacctctta 636478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 33796033 - 33796112
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| ||||||||||||||||||||||||| | |||||||||||| ||||||| |||||| || |||||| ||||    
T  33796033 tcatgaataaaagacaacttatcaacttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 33796112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 41389743 - 41389664
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| || |||||||||||||||||||||| | |||||||||||||||||||| |||||| ||| ||||| ||||    
T  41389743 tcatgaataaaaaacaacttatcaacttaacataaacatcatcaagtacatttaacaactcatagataatatcatgtaat 41389664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 98 - 150
Target Start/End: Complemental strand, 23195743 - 23195691
Alignment:
Q  98 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 150  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  23195743 tatgtcatttacaaccaacaacaccgactcatgcaaatgacatgacaacaccg 23195691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 98 - 150
Target Start/End: Original strand, 21541966 - 21542018
Alignment:
Q  98 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 150  Q
    |||||||  ||||||||| ||||||||||||||||||||||||||||||||||    
T  21541966 tatggcaactacaaccaacaacaccgactcatgcaaatgacatgacaacaccg 21542018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 207 - 271
Target Start/End: Complemental strand, 39245234 - 39245170
Alignment:
Q  207 aacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||||||||||||||||||| | |||||||||||||||||||| |||||| ||| ||||| ||||    
T  39245234 aacttatcaacttaacataaacatcatcaagtacatttaacaactcatagataatatcatgtaat 39245170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 207 - 271
Target Start/End: Complemental strand, 39248789 - 39248725
Alignment:
Q  207 aacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||||||||||||||||||| | |||||||||||||||||||| |||||| ||| ||||| ||||    
T  39248789 aacttatcaacttaacataaacatcatcaagtacatttaacaactcatagataatatcatgtaat 39248725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 98 - 150
Target Start/End: Complemental strand, 42096170 - 42096118
Alignment:
Q  98 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 150  Q
    |||||||  ||||||||| ||||||||||||||||||||||||||||||||||    
T  42096170 tatggcaactacaaccaacaacaccgactcatgcaaatgacatgacaacaccg 42096118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 1009262 - 1009341
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||| |||| ||||||||||||||| ||||||||| | |||||||||||| ||||||| |||||| || |||||| ||||    
T  1009262 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 1009341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 1926874 - 1926795
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||| |||| ||||||||||||||| ||||||||| | |||||||||||| ||||||| |||||| || |||||| ||||    
T  1926874 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 1926795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 16376894 - 16376815
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||| |||| ||||||||||||||| ||||||||| | |||||||||||| ||||||| |||||| || |||||| ||||    
T  16376894 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 16376815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 20925888 - 20925809
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||| |||| ||||||||||||||| ||||||||| | |||||||||||| ||||||| |||||| || |||||| ||||    
T  20925888 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 20925809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 20439230 - 20439188
Alignment:
Q  193 catgaatagaagacaacttatcaacttaacataaccctcatca 235  Q
    |||||||| ||||||||||||||||||||||||||| ||||||    
T  20439230 catgaataaaagacaacttatcaacttaacataaccatcatca 20439188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 271
Target Start/End: Original strand, 52634283 - 52634347
Alignment:
Q  207 aacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||||||||| ||||||||| | |||||||||||| ||||||| |||||| || |||||| ||||    
T  52634283 aacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 52634347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 340 - 385
Target Start/End: Original strand, 29534366 - 29534412
Alignment:
Q  340 aacgtaagcgtacaccacctcttat-aagcaacaacaaagtaagagt 385  Q
    |||||||| |||||||||||||||| || ||||||||||||||||||    
T  29534366 aacgtaagagtacaccacctcttataaaacaacaacaaagtaagagt 29534412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 150
Target Start/End: Original strand, 24079437 - 24079486
Alignment:
Q  101 ggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 150  Q
    |||| |||||| ||| ||||||||||||| ||||||||||||| ||||||    
T  24079437 ggcaattacaaacaacaacaccgactcatacaaatgacatgactacaccg 24079486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 148
Target Start/End: Complemental strand, 24109284 - 24109243
Alignment:
Q  107 tacaaccaataacaccgactcatgcaaatgacatgacaacac 148  Q
    ||||||||| || |||||||||||||| ||||||||||||||    
T  24109284 tacaaccaacaagaccgactcatgcaactgacatgacaacac 24109243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 134; Significance: 1e-69; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 192 - 385
Target Start/End: Original strand, 37379036 - 37379229
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataatatcctaacaaccccacattc 291  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||| ||||||||||||||||    
T  37379036 tcatgaataaaagacaacttatcaacttaacataaccctcatcaagtacatttaacaactcataggtaacctcatgtaatatcataacaaccccacattc 37379135  T
Q  292 aacacgataaaagatcattgtaacctcgtcatactcttcaacataaagaacgtaagcgtacaccacctcttataagcaacaacaaagtaagagt 385  Q
    ||||  ||||||||||||  |||||||||||||||| |||||||||| || ||||| |||||||||||||||||  ||||||||||||||||||    
T  37379136 aacatcataaaagatcatcataacctcgtcatactcatcaacataaacaaagtaagagtacaccacctcttatagacaacaacaaagtaagagt 37379229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 9240674 - 9240753
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||| |||||    
T  9240674 tcatgaatagaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcacataat 9240753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 19663636 - 19663557
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||| |||||    
T  19663636 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcacataat 19663557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 20260257 - 20260336
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||| |||||    
T  20260257 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcacataat 20260336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 192 - 266
Target Start/End: Complemental strand, 21074586 - 21074512
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcat 266  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||    
T  21074586 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcat 21074512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 6481784 - 6481863
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||| |||||| |||||||| |||||    
T  6481784 tcatgaataaaagacaacctatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcacataat 6481863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 6485251 - 6485330
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||| |||||| |||||||| |||||    
T  6485251 tcatgaataaaagacaacctatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcacataat 6485330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 9783994 - 9784073
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||| ||||| |||||| ||||||||| ||||    
T  9783994 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacattaaacaactcatagataacatcatgtaat 9784073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 98 - 150
Target Start/End: Complemental strand, 21133521 - 21133469
Alignment:
Q  98 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 150  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  21133521 tatggcatttacaaccaacaacaccgactcatgcaaatgacatgacaacaccg 21133469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 98 - 148
Target Start/End: Original strand, 11465983 - 11466033
Alignment:
Q  98 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacac 148  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  11465983 tatggcatttacaaccaacaacaccgactcatgcaaatgacatgacaacac 11466033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 10686325 - 10686272
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacattta 245  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  10686325 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacattta 10686272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 192 - 266
Target Start/End: Complemental strand, 41532521 - 41532447
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcat 266  Q
    ||||||||| ||||||||||||||| ||||||||| | |||||||||||| ||||||| |||||| || ||||||    
T  41532521 tcatgaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcat 41532447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 98 - 150
Target Start/End: Complemental strand, 6744591 - 6744539
Alignment:
Q  98 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 150  Q
    |||||||  ||||||||| ||||||||||||||||||||||||||||||||||    
T  6744591 tatggcaactacaaccaacaacaccgactcatgcaaatgacatgacaacaccg 6744539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 98 - 150
Target Start/End: Complemental strand, 19649812 - 19649760
Alignment:
Q  98 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 150  Q
    ||||||| |||||||||| ||||||||||||||||||||||||| ||||||||    
T  19649812 tatggcaattacaaccaacaacaccgactcatgcaaatgacatgtcaacaccg 19649760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 24630126 - 24630047
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||| |||| ||||||||||||||| ||||||||| | |||||||||||| ||||||| |||||| || |||||| ||||    
T  24630126 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 24630047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 24645151 - 24645230
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||| |||| ||||||||||||||| ||||||||| | |||||||||||| ||||||| |||||| || |||||| ||||    
T  24645151 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 24645230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 24647927 - 24648006
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||| |||| ||||||||||||||| ||||||||| | |||||||||||| ||||||| |||||| || |||||| ||||    
T  24647927 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 24648006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 27381072 - 27380993
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||| |||| ||||||||||||||| ||||||||| | |||||||||||| ||||||| |||||| || |||||| ||||    
T  27381072 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 27380993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 27385042 - 27384963
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||| |||| ||||||||||||||| ||||||||| | |||||||||||| ||||||| |||||| || |||||| ||||    
T  27385042 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 27384963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 27600371 - 27600450
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||| |||| ||||||||||||||| ||||||||| | |||||||||||| ||||||| |||||| || |||||| ||||    
T  27600371 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 27600450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 30346736 - 30346657
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||| |||| ||||||||||||||| ||||||||| | |||||||||||| ||||||| |||||| || |||||| ||||    
T  30346736 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 30346657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 192 - 256
Target Start/End: Complemental strand, 10103375 - 10103311
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcatag 256  Q
    |||| |||| ||||||||||||||| ||||||||| | |||||||||||| ||||||| ||||||    
T  10103375 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatag 10103311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 192 - 256
Target Start/End: Complemental strand, 12902685 - 12902621
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcatag 256  Q
    |||| |||| ||||||||||||||| ||||||||| | |||||||||||| ||||||| ||||||    
T  12902685 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatag 12902621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 330 - 385
Target Start/End: Original strand, 22702873 - 22702929
Alignment:
Q  330 caacataaagaacgtaagcgtacaccacctcttat-aagcaacaacaaagtaagagt 385  Q
    ||||||||| |||||||| |||||||||||||||| || ||||||||||||||||||    
T  22702873 caacataaacaacgtaagagtacaccacctcttataaaacaacaacaaagtaagagt 22702929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 192 - 256
Target Start/End: Original strand, 24647094 - 24647158
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcatag 256  Q
    |||| |||| ||||||||||||||| ||||||||| | |||||||||||| ||||||| ||||||    
T  24647094 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatag 24647158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 98 - 146
Target Start/End: Complemental strand, 27367850 - 27367802
Alignment:
Q  98 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaac 146  Q
    |||||||  ||||||||| ||||||||||||||||||||||||||||||    
T  27367850 tatggcaactacaaccaacaacaccgactcatgcaaatgacatgacaac 27367802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 98 - 150
Target Start/End: Complemental strand, 28971573 - 28971521
Alignment:
Q  98 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 150  Q
    ||||||| |||||||||| ||||||||||||||  ||||||||||||||||||    
T  28971573 tatggcaattacaaccaacaacaccgactcatgtgaatgacatgacaacaccg 28971521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 110 - 150
Target Start/End: Original strand, 43693323 - 43693363
Alignment:
Q  110 aaccaataacaccgactcatgcaaatgacatgacaacaccg 150  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  43693323 aaccaacaacaccgactcatgcaaatgacatgacaacaccg 43693363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 256
Target Start/End: Original strand, 31343917 - 31343981
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcatag 256  Q
    ||||||||| |||||| |||||||||||||||||  | ||||||||||||  |||||| ||||||    
T  31343917 tcatgaataaaagacagcttatcaacttaacatatacatcatcaagtacacctaacaactcatag 31343981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 117 - 148
Target Start/End: Complemental strand, 28971527 - 28971496
Alignment:
Q  117 aacaccgactcatgcaaatgacatgacaacac 148  Q
    ||||||||||||||||||||||||||||||||    
T  28971527 aacaccgactcatgcaaatgacatgacaacac 28971496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 127; Significance: 2e-65; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 158 - 385
Target Start/End: Original strand, 19075863 - 19076082
Alignment:
Q  158 tcaataataattcttcttaacatccccttaatgctcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcatagg 257  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||||||        |||||||||||||||||||||||||||||||| |||||||    
T  19075863 tcaataataattctccttaacatccccttagtgctcatgaatagaagacaac--------ttaacataaccctcatcaagtacatttaacaactcatagg 19075954  T
Q  258 taacatcatataatatcctaacaaccccacattcaacacgataaaagatcattgtaacctcgtcatactcttcaacataaagaacgtaagcgtacaccac 357  Q
    |||| |||| ||||||| |||||||| | |||||||||| ||| ||||||||  |||||||||||||||| |||||||||| || ||||| |||||||||    
T  19075955 taacctcatgtaatatcataacaacctcgcattcaacactatagaagatcatcataacctcgtcatactcatcaacataaacaaagtaagagtacaccac 19076054  T
Q  358 ctcttataagcaacaacaaagtaagagt 385  Q
    ||||||||  ||||||||||||||||||    
T  19076055 ctcttatagacaacaacaaagtaagagt 19076082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 192 - 366
Target Start/End: Complemental strand, 33474010 - 33473836
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataatatcctaacaaccccacattc 291  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||| ||||||| ||||||||||||||||    
T  33474010 tcatgaataaaagacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaatatcataacaaccccacattc 33473911  T
Q  292 aacacgataaaagatcattgtaacctcgtcatactcttcaacataaagaacgtaagcgtacaccacctcttataa 366  Q
    ||||  ||||||||||||  |||||||||||||||| |||||||||| |||||||| ||||||||||||||||||    
T  33473910 aacatcataaaagatcatcataacctcgtcatactcatcaacataaacaacgtaagagtacaccacctcttataa 33473836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 155 - 385
Target Start/End: Complemental strand, 31253318 - 31253096
Alignment:
Q  155 cactcaataataattcttcttaacatccccttaatgctcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcat 254  Q
    |||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||        ||||||||||||||||||||||||||||| |  |    
T  31253318 cactcaatgataattctccttaacatccccttagtgctcatgaatagaagacaactta--------acataaccctcatcaagtacatttaacaacttgt 31253227  T
Q  255 aggtaacatcatataatatcctaacaaccccacattcaacacgataaaagatcattgtaacctcgtcatactcttcaacataaagaacgtaagcgtacac 354  Q
    ||||||| |||| ||||||| |||||||| | |||||||||| ||| ||||||||  |||||||||||||||| |||||||||| || ||||| ||||||    
T  31253226 aggtaacctcatgtaatatcataacaacctcgcattcaacactatagaagatcatcataacctcgtcatactcatcaacataaacaaggtaagagtacac 31253127  T
Q  355 cacctcttataagcaacaacaaagtaagagt 385  Q
    |||||||||||  ||||||||||||||||||    
T  31253126 cacctcttatagacaacaacaaagtaagagt 31253096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 98 - 267
Target Start/End: Complemental strand, 43243924 - 43243763
Alignment:
Q  98 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccgtatgcactcaataataattcttcttaacatccccttaatgctcatga 197  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  43243924 tatggcatttacaaccaacaacatcgactcatgcaaatgacatgacaacaccgtatgcacttaataataattcttcttaacatccccttaatgctcatga 43243825  T
Q  198 atagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcata 267  Q
    |||||||||||        ||||||||||||||| || |||||||||||||| |||||||||||||||||    
T  43243824 atagaagacaa--------cttaacataaccctcctcgagtacatttaacaactcataggtaacatcata 43243763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 205 - 374
Target Start/End: Original strand, 36459561 - 36459730
Alignment:
Q  205 acaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataatatcctaacaaccccacattcaacacgataaaag 304  Q
    |||||||||||||||||||||| | |||| ||||||||||||||| |||||| ||||||||| ||| |||  |||| || | |||||||||| |||||      
T  36459561 acaacttatcaacttaacataatcatcattaagtacatttaacaactcatagataacatcatgtaacatcaaaacagcctctcattcaacactataaaca 36459660  T
Q  305 atcattgtaacctcgtcatactcttcaacataaagaacgtaagcgtacaccacctcttataagcaacaac 374  Q
    |||||  |||| |||||||| || |||||||||| |||||||| |||||||||||||||||| |||||||    
T  36459661 atcatcataacatcgtcataatcatcaacataaacaacgtaagagtacaccacctcttataaacaacaac 36459730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 22120670 - 22120591
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||||||||    
T  22120670 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcatataat 22120591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 28372160 - 28372081
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||| |||||    
T  28372160 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcacataat 28372081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 37600087 - 37600008
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||| |||||    
T  37600087 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcacataat 37600008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 15238196 - 15238117
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||| |||||| ||||||||| ||||    
T  15238196 tcatgaataaaagacaacttatcaacttaacataaacatcatcaagtacatttaacaactcatagataacatcatgtaat 15238117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 19510462 - 19510541
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||| |||||| |||||||| |||||    
T  19510462 tcatgaataaaagacaacctatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcacataat 19510541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 22339012 - 22339091
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| |||||||||||||||| |||||||||| |||||||||||||||||||| |||||| |||||||| |||||    
T  22339012 tcatgaataaaagacaacttatcaacgtaacataaccatcatcaagtacatttaacaactcatagataacatcacataat 22339091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 38146497 - 38146418
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||| |||||| |||||||| |||||    
T  38146497 tcatgaataaaagacaacttatcaacttaacataatcatcatcaagtacatttaacaactcatagataacatcacataat 38146418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 191 - 271
Target Start/End: Original strand, 22749160 - 22749240
Alignment:
Q  191 ctcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||||||||| | ||||||||||||||||||||||||| |||||||||||||||||| | |||||| |||||||| |||||    
T  22749160 ctcatgaatataggacaacttatcaacttaacataaccatcatcaagtacatttaaccactcatagataacatcacataat 22749240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 22335482 - 22335561
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| |||||||||||||||| |||||||||| ||||||| |||||||||||| |||||| |||||||| |||||    
T  22335482 tcatgaataaaagacaacttatcaacgtaacataaccatcatcaaatacatttaacaactcatagataacatcacataat 22335561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 23113481 - 23113402
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| |||||||||||||||||||||| || | |||||||||||||||||||| |||||| |||||||| |||||    
T  23113481 tcatgaataaaagacaacttatcaacttaacacaatcatcatcaagtacatttaacaactcatagataacatcacataat 23113402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 41878730 - 41878651
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||| |||| ||||||||||||||||||||||||||  |||||||||||||||||||| |||||| |||||||| |||||    
T  41878730 tcataaataaaagacaacttatcaacttaacataactatcatcaagtacatttaacaactcatagataacatcacataat 41878651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 195 - 271
Target Start/End: Original strand, 10751820 - 10751896
Alignment:
Q  195 tgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||||| ||||||||||||||||||||||||| | |||||||||||||||||||| |||||| ||| ||||| ||||    
T  10751820 tgaataaaagacaacttatcaacttaacataaacatcatcaagtacatttaacaactcatagataatatcatgtaat 10751896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 20912331 - 20912252
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| ||||||||||||||||||||||||  | |||||||||||| ||||||| |||||| ||||||||| ||||    
T  20912331 tcatgaataaaagacaacttatcaacttaacatacacatcatcaagtacacttaacaactcatagataacatcatgtaat 20912252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 312 - 385
Target Start/End: Complemental strand, 43243764 - 43243691
Alignment:
Q  312 taacctcgtcatactcttcaacataaagaacgtaagcgtacaccacctcttataagcaacaacaaagtaagagt 385  Q
    ||||||| |||||||| |||||||||| |||||||| ||| |||||||||||||  ||||||||||||||||||    
T  43243764 taacctcatcatactcatcaacataaacaacgtaagagtaaaccacctcttatagacaacaacaaagtaagagt 43243691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 18354797 - 18354876
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| ||||||| ||||||||||||||||| | |||||||||||| ||||||| |||||| || |||||| ||||    
T  18354797 tcatgaataaaagacaatttatcaacttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 18354876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 24768641 - 24768562
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| ||||||||||||||||||||||||| | |||||| ||||| ||||||| |||||| || |||||| ||||    
T  24768641 tcatgaataaaagacaacttatcaacttaacataaacatcatcaggtacacttaacaactcatagatatcatcatgtaat 24768562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 192 - 266
Target Start/End: Original strand, 11219555 - 11219629
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcat 266  Q
    ||||||||| ||||||||||||||| ||||||||| | |||||||||||| ||||||| |||||| || ||||||    
T  11219555 tcatgaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcat 11219629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 98 - 148
Target Start/End: Complemental strand, 27636144 - 27636094
Alignment:
Q  98 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacac 148  Q
    ||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  27636144 tatggcaattacaaccaacaacaccgactcatgcaaatgacatgacaacac 27636094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 99 - 148
Target Start/End: Complemental strand, 24669258 - 24669209
Alignment:
Q  99 atggcatttacaaccaataacaccgactcatgcaaatgacatgacaacac 148  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  24669258 atggcaattacaaccaacaacaccgactcatgcaaatgacatgacaacac 24669209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 99 - 148
Target Start/End: Complemental strand, 24739027 - 24738978
Alignment:
Q  99 atggcatttacaaccaataacaccgactcatgcaaatgacatgacaacac 148  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  24739027 atggcaattacaaccaacaacaccgactcatgcaaatgacatgacaacac 24738978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 99 - 148
Target Start/End: Complemental strand, 24751796 - 24751747
Alignment:
Q  99 atggcatttacaaccaataacaccgactcatgcaaatgacatgacaacac 148  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  24751796 atggcaattacaaccaacaacaccgactcatgcaaatgacatgacaacac 24751747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 159 - 212
Target Start/End: Original strand, 36459430 - 36459483
Alignment:
Q  159 caataataattcttcttaacatccccttaatgctcatgaatagaagacaactta 212  Q
    ||||||||||| ||||||||||||||||| | ||||||||||||||||||||||    
T  36459430 caataataatttttcttaacatccccttagtactcatgaatagaagacaactta 36459483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 98 - 150
Target Start/End: Original strand, 20831688 - 20831740
Alignment:
Q  98 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 150  Q
    ||||||| ||||| |||| ||||||||||||||||||||||||||||||||||    
T  20831688 tatggcaattacatccaacaacaccgactcatgcaaatgacatgacaacaccg 20831740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 19474251 - 19474172
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||| |||| ||||||||||||||| ||||||||| | |||||||||||| ||||||| |||||| || |||||| ||||    
T  19474251 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 19474172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 20294514 - 20294593
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||| |||| ||||||||||||||| ||||||||| | |||||||||||| ||||||| |||||| || |||||| ||||    
T  20294514 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 20294593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 192 - 266
Target Start/End: Original strand, 11224141 - 11224215
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcat 266  Q
    ||||||||| |||||| |||||||| ||||||||| | |||||||||||| ||||||| |||||| || ||||||    
T  11224141 tcatgaataaaagacagcttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcat 11224215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 192 - 266
Target Start/End: Original strand, 11226157 - 11226231
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcat 266  Q
    ||||||||| |||||| |||||||| ||||||||| | |||||||||||| ||||||| |||||| || ||||||    
T  11226157 tcatgaataaaagacagcttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcat 11226231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 192 - 266
Target Start/End: Original strand, 11227963 - 11228037
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcat 266  Q
    ||||||||| |||||| |||||||| ||||||||| | |||||||||||| ||||||| |||||| || ||||||    
T  11227963 tcatgaataaaagacagcttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcat 11228037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 192 - 266
Target Start/End: Original strand, 11229953 - 11230027
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcat 266  Q
    ||||||||| |||||| |||||||| ||||||||| | |||||||||||| ||||||| |||||| || ||||||    
T  11229953 tcatgaataaaagacagcttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcat 11230027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 191 - 267
Target Start/End: Original strand, 9774940 - 9775015
Alignment:
Q  191 ctcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcata 267  Q
    |||||||||||| ||||||||| |||||  || ||||  |||||||||||||||||||| |||||| ||||||||||    
T  9774940 ctcatgaatagaggacaacttagcaactatacgtaaca-tcatcaagtacatttaacaactcatagataacatcata 9775015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 22108527 - 22108449
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| ||||||||||||||| |  || ||||  |||||||||||||||||||| |||||| ||||||||| ||||    
T  22108527 tcatgaataaaagacaacttatcaattatacgtaaca-tcatcaagtacatttaacaactcatagataacatcatgtaat 22108449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 340 - 385
Target Start/End: Original strand, 10816220 - 10816266
Alignment:
Q  340 aacgtaagcgtacaccacctcttat-aagcaacaacaaagtaagagt 385  Q
    |||||||| |||||||||||||||| || ||||||||||||||||||    
T  10816220 aacgtaagagtacaccacctcttataaaacaacaacaaagtaagagt 10816266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 241
Target Start/End: Complemental strand, 40727477 - 40727429
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtaca 241  Q
    ||||||||| |||| |||||||||||||||||||| | ||||||||||||    
T  40727477 tcatgaataaaagataacttatcaacttaacataa-catcatcaagtaca 40727429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 150
Target Start/End: Complemental strand, 1857770 - 1857718
Alignment:
Q  98 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 150  Q
    |||||||  ||||||||| |||||||||||||||||| | |||||| ||||||    
T  1857770 tatggcaactacaaccaacaacaccgactcatgcaaaggtcatgaccacaccg 1857718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 150
Target Start/End: Complemental strand, 21675738 - 21675686
Alignment:
Q  98 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 150  Q
    |||||||  ||||||||| |||||||||||||||||| | |||||| ||||||    
T  21675738 tatggcaactacaaccaacaacaccgactcatgcaaaggtcatgaccacaccg 21675686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 127; Significance: 2e-65; HSPs: 81)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 192 - 366
Target Start/End: Original strand, 41134 - 41308
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataatatcctaacaaccccacattc 291  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||| ||||||||||||||||    
T  41134 tcatgaataaaagacaacttatcaacttaacataaccctcatcaagtacatttaacaactcataggtaacctcatgtaatatcataacaaccccacattc 41233  T
Q  292 aacacgataaaagatcattgtaacctcgtcatactcttcaacataaagaacgtaagcgtacaccacctcttataa 366  Q
    ||||  ||||||||||||  |||||||||||||||| |||||||||| |||||||| ||||||||||||||||||    
T  41234 aacatcataaaagatcatcataacctcgtcatactcatcaacataaacaacgtaagagtacaccacctcttataa 41308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 155 - 385
Target Start/End: Complemental strand, 45221070 - 45220848
Alignment:
Q  155 cactcaataataattcttcttaacatccccttaatgctcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcat 254  Q
    ||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||        ||||||||||||||||||||||||||||| ||||    
T  45221070 cactcaataataattctccttaacatccccgtagtgctcatgaatagaagacaactta--------acataaccctcatcaagtacatttaacaactcat 45220979  T
Q  255 aggtaacatcatataatatcctaacaaccccacattcaacacgataaaagatcattgtaacctcgtcatactcttcaacataaagaacgtaagcgtacac 354  Q
    ||||||| |||| ||||||| |||||||| | |||||||||| ||| ||||||||  |||||||||||||||| |||||||||| || ||||| ||||||    
T  45220978 aggtaacctcatgtaatatcataacaacctcgcattcaacactatagaagatcatcataacctcgtcatactcatcaacataaacaaagtaagagtacac 45220879  T
Q  355 cacctcttataagcaacaacaaagtaagagt 385  Q
    |||||||||||  ||||||||||||||||||    
T  45220878 cacctcttatagacaacaacaaagtaagagt 45220848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 98 - 267
Target Start/End: Complemental strand, 14648435 - 14648274
Alignment:
Q  98 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccgtatgcactcaataataattcttcttaacatccccttaatgctcatga 197  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14648435 tatggcatttacaaccaacaacaccgactcatgcaaatgacatgacaacaccgtatgcactcaataataattcttcttaacatccccttaatgctcatga 14648336  T
Q  198 atagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcata 267  Q
    |||||||||||        ||||||||||||||| || |||||||||||||| |||||||||||||||||    
T  14648335 atagaagacaa--------cttaacataaccctcctcgagtacatttaacaactcataggtaacatcata 14648274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 155 - 385
Target Start/End: Complemental strand, 2249324 - 2249102
Alignment:
Q  155 cactcaataataattcttcttaacatccccttaatgctcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcat 254  Q
    |||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||        |||||||||||||||||||||||||| || ||||    
T  2249324 cactcaataattcttcttcttaacatccccttagtgctcatgaatagaagacaactta--------acataaccctcatcaagtacatttaataactcat 2249233  T
Q  255 aggtaacatcatataatatcctaacaaccccacattcaacacgataaaagatcattgtaacctcgtcatactcttcaacataaagaacgtaagcgtacac 354  Q
    |||||||||||| ||||||| |||||||| |||||||||||| ||| ||||||||  |||||||||||||||| |||||||| |  ||||||| ||||||    
T  2249232 aggtaacatcatgtaatatcataacaacctcacattcaacactatagaagatcatcataacctcgtcatactcatcaacatagaccacgtaagagtacac 2249133  T
Q  355 cacctcttataagcaacaacaaagtaagagt 385  Q
    ||||||| |||  ||||||||||||||||||    
T  2249132 cacctctcatagacaacaacaaagtaagagt 2249102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 158 - 385
Target Start/End: Original strand, 5841140 - 5841359
Alignment:
Q  158 tcaataataattcttcttaacatccccttaatgctcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcatagg 257  Q
    |||||||||||||| |||||||| | |||| ||||||||||||||||        ||||||||||||||||||||||||||||||||||||| |||||||    
T  5841140 tcaataataattctccttaacattctcttagtgctcatgaatagaag--------tcaacttaacataaccctcatcaagtacatttaacaactcatagg 5841231  T
Q  258 taacatcatataatatcctaacaaccccacattcaacacgataaaagatcattgtaacctcgtcatactcttcaacataaagaacgtaagcgtacaccac 357  Q
    |||| |||| ||||||| |||||||| | |||||||||| ||| ||||||||  |||||||||||||||| |||||||||| |||||||| |||||||||    
T  5841232 taacctcatgtaatatcataacaacctcgcattcaacactatagaagatcatcataacctcgtcatactcatcaacataaacaacgtaagagtacaccac 5841331  T
Q  358 ctcttataagcaacaacaaagtaagagt 385  Q
    ||||||||  |||||||||| |||||||    
T  5841332 ctcttatagacaacaacaaaataagagt 5841359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 192 - 366
Target Start/End: Complemental strand, 16326120 - 16325946
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataatatcctaacaaccccacattc 291  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||| ||||||| |||||||| || ||||    
T  16326120 tcatgaataaaagacaacttatcaacttgacataaccctcatcaagtacatttaacaactcataggtaacctcatgtaatatcataacaacctcatattc 16326021  T
Q  292 aacacgataaaagatcattgtaacctcgtcatactcttcaacataaagaacgtaagcgtacaccacctcttataa 366  Q
    ||||  ||||||||||||  |||| ||||||||||| |||||||||| |||||||| ||||||||||||||||||    
T  16326020 aacatcataaaagatcatcataacttcgtcatactcatcaacataaacaacgtaagagtacaccacctcttataa 16325946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 205 - 366
Target Start/End: Complemental strand, 16840269 - 16840108
Alignment:
Q  205 acaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataatatcctaacaaccccacattcaacacgataaaag 304  Q
    |||||||||||||||||||||||| ||||||| |||||||||||| |||||| ||| ||||| ||| ||| |||||||| |||||||||||| |||||      
T  16840269 acaacttatcaacttaacataaccatcatcaaatacatttaacaactcatagataaaatcatgtaacatcataacaacctcacattcaacactataaaca 16840170  T
Q  305 atcattgtaacctcgtcatactcttcaacataaagaacgtaagcgtacaccacctcttataa 366  Q
    |||||  |||| || ||||| || |||||||||| |||||||| ||||||||||||||||||    
T  16840169 atcatcataacatcatcataatcatcaacataaacaacgtaagagtacaccacctcttataa 16840108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 192 - 302
Target Start/End: Complemental strand, 10835020 - 10834909
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat-atcctaacaaccccacatt 290  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||| |||| ||| |||||||| || |||    
T  10835020 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcatgtaatcatcataacaacctcatatt 10834921  T
Q  291 caacacgataaa 302  Q
    |||||| |||||    
T  10834920 caacaccataaa 10834909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 191 - 271
Target Start/End: Complemental strand, 4590240 - 4590160
Alignment:
Q  191 ctcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||| ||||||||| ||||    
T  4590240 ctcatgaatagaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcctagataacatcatgtaat 4590160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 191 - 271
Target Start/End: Complemental strand, 8491812 - 8491732
Alignment:
Q  191 ctcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||| ||||||||| ||||    
T  8491812 ctcatgaatagaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcctagataacatcatgtaat 8491732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 3801970 - 3802049
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||| |||||    
T  3801970 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcacataat 3802049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 12853442 - 12853363
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||| ||||    
T  12853442 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcatgtaat 12853363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 14670026 - 14670105
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||| ||||    
T  14670026 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcatgtaat 14670105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 14764874 - 14764795
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||| |||||    
T  14764874 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcacataat 14764795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 16795503 - 16795582
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||| ||||    
T  16795503 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcatgtaat 16795582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 18899453 - 18899532
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||| |||||    
T  18899453 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcacataat 18899532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 20249928 - 20249849
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||| |||||    
T  20249928 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcacataat 20249849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 54519597 - 54519676
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||| |||||    
T  54519597 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcacataat 54519676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 205 - 346
Target Start/End: Original strand, 11912440 - 11912581
Alignment:
Q  205 acaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataatatcctaacaaccccacattcaacacgataaaag 304  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||| ||| |||  || | || | |||||||||| |||||      
T  11912440 acaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcatgtaacatcaaaaaagcctctcattcaacactataaaca 11912539  T
Q  305 atcattgtaacctcgtcatactcttcaacataaagaacgtaa 346  Q
    |||||  |||| || ||||| || |||||||||| |||||||    
T  11912540 atcatcataacatcatcataatcatcaacataaacaacgtaa 11912581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 13435818 - 13435897
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||  ||||||||| ||||    
T  13435818 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcatatataacatcatgtaat 13435897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 191 - 266
Target Start/End: Complemental strand, 17318589 - 17318514
Alignment:
Q  191 ctcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcat 266  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||| |||| ||||    
T  17318589 ctcatgaatagaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcctagataacttcat 17318514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 193 - 266
Target Start/End: Complemental strand, 8928945 - 8928872
Alignment:
Q  193 catgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcat 266  Q
    |||||||| |||||||||||||||||||||||||||  ||||||||||||||||||| |||||| |||||||||    
T  8928945 catgaataaaagacaacttatcaacttaacataaccaccatcaagtacatttaacaactcatagataacatcat 8928872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 192 - 264
Target Start/End: Original strand, 9532258 - 9532330
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatc 264  Q
    ||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||||| |||||| |||||||    
T  9532258 tcatgaataaaagacaacttatcaactcaacataaccatcatcaagtacatttaacaactcatagataacatc 9532330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 192 - 264
Target Start/End: Original strand, 12304174 - 12304246
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatc 264  Q
    ||||||||| || |||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||    
T  12304174 tcatgaataaaatacaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatc 12304246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 23372622 - 23372543
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||| |||||  |||||||| |||||    
T  23372622 tcatgaataaaagacaacttatcaacttaacataacaatcatcaagtacatttaacaactcataaataacatcacataat 23372543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 29546017 - 29545938
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||||| || |||||||||||||||||||||| |||| |||||||||||||||||||| |||||| |||||||| |||||    
T  29546017 tcatgactaaaagacaacttatcaacttaacacaaccatcatcaagtacatttaacaactcatagataacatcacataat 29545938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 51299533 - 51299612
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||| |||||  |||||||| |||||    
T  51299533 tcatgaataaaagacaacttatcaacttaacataacaatcatcaagtacatttaacaactcataaataacatcacataat 51299612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 312 - 385
Target Start/End: Complemental strand, 14648275 - 14648202
Alignment:
Q  312 taacctcgtcatactcttcaacataaagaacgtaagcgtacaccacctcttataagcaacaacaaagtaagagt 385  Q
    ||||||| |||||||| |||||||||| |||||||| |||||||||||||||||  ||||||||||||||||||    
T  14648275 taacctcatcatactcatcaacataaacaacgtaagagtacaccacctcttatagacaacaacaaagtaagagt 14648202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 192 - 249
Target Start/End: Original strand, 14681550 - 14681607
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaa 249  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  14681550 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaa 14681607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 191 - 256
Target Start/End: Original strand, 23173296 - 23173361
Alignment:
Q  191 ctcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcatag 256  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||| ||||||||| ||||||    
T  23173296 ctcatgaatagaagacaacttatcaacttaacataactatcatcaagtatatttaacaactcatag 23173361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 191 - 271
Target Start/End: Complemental strand, 14068142 - 14068062
Alignment:
Q  191 ctcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||| |||||||| ||| || ||| ||||||||| ||||    
T  14068142 ctcatgaatagaagacaacttatcgacttaacataaccatcatcaaatacatttagcaactcctagataacatcatgtaat 14068062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 192 - 256
Target Start/End: Original strand, 14664425 - 14664489
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcatag 256  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||| ||||||    
T  14664425 tcatgaatagaagacaacttatcaacttaacataaacatcatcaagtacacttaacaactcatag 14664489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 192 - 256
Target Start/End: Original strand, 14667589 - 14667653
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcatag 256  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||| ||||||    
T  14667589 tcatgaatagaagacaacttatcaacttaacataaacatcatcaagtacacttaacaactcatag 14667653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 192 - 264
Target Start/End: Original strand, 15463878 - 15463950
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatc 264  Q
    ||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||| |||||  |||||||    
T  15463878 tcatgaataaaagacaacttatcaacttaacataaacgtcatcaagtacatttaacaactcatatataacatc 15463950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 30064384 - 30064464
Alignment:
Q  192 tcatgaatagaagacaacttatcaactt-aacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| |||||||||||||||||| ||||||||| |||||||||||| ||||||| |||||| ||||||||| ||||    
T  30064384 tcatgaataaaagacaacttatcaactttaacataaccatcatcaagtacacttaacaactcatagataacatcatgtaat 30064464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 5219847 - 5219926
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| ||||||||||||||||||||||||| | |||||||||||| ||||||| |||||| || |||||| ||||    
T  5219847 tcatgaataaaagacaacttatcaacttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 5219926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 38312936 - 38312857
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| |||||||||||| |||||||||||||| |||||||||||||||||| | |||||| ||||| || |||||    
T  38312936 tcatgaataaaagacaacttataaacttaacataaccatcatcaagtacatttaaccactcatagataacaccacataat 38312857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 192 - 266
Target Start/End: Complemental strand, 11301744 - 11301670
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcat 266  Q
    ||||||||| ||||||||||||||||||||||||| | |||||||||||| ||||||| |||||| || ||||||    
T  11301744 tcatgaataaaagacaacttatcaacttaacataaacatcatcaagtacacttaacaactcatagatatcatcat 11301670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 160 - 218
Target Start/End: Complemental strand, 16840399 - 16840341
Alignment:
Q  160 aataataattcttcttaacatccccttaatgctcatgaatagaagacaacttatcaact 218  Q
    |||||||||||||||||||||||||||| | |||||||||||||||||||||| |||||    
T  16840399 aataataattcttcttaacatccccttagtactcatgaatagaagacaacttaacaact 16840341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 159 - 212
Target Start/End: Original strand, 11912309 - 11912362
Alignment:
Q  159 caataataattcttcttaacatccccttaatgctcatgaatagaagacaactta 212  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  11912309 caataataattcttcttaacatccccttagtactcatgaatagaagacaactta 11912362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 16751978 - 16751901
Alignment:
Q  194 atgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||| |||| |||||||||||||||||||| | |||||||||||||||||||| |||||| ||| ||||| ||||    
T  16751978 atgaataaaagataacttatcaacttaacataaacatcatcaagtacatttaacaactcatagataatatcatgtaat 16751901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 192 - 249
Target Start/End: Original strand, 19774198 - 19774255
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaa 249  Q
    ||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||    
T  19774198 tcatgaataaaagacaacttatcaacttaacataaacatcatcaagtacatttaacaa 19774255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 159 - 212
Target Start/End: Complemental strand, 51608718 - 51608665
Alignment:
Q  159 caataataattcttcttaacatccccttaatgctcatgaatagaagacaactta 212  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  51608718 caataataattcttcttaacatccccttagtactcatgaatagaagacaactta 51608665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 195 - 271
Target Start/End: Original strand, 11853709 - 11853785
Alignment:
Q  195 tgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||||| ||||||||||||||||||||||||| | |||||||||||| ||||||| |||||| || |||||| ||||    
T  11853709 tgaataaaagacaacttatcaacttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 11853785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 18933435 - 18933355
Alignment:
Q  192 tcatgaatagaagacaacttatcaactt-aacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| || ||||||||||||||| ||||||||| |||||||||||| ||||||| |||||| ||||||||| ||||    
T  18933435 tcatgaataaaatacaacttatcaactttaacataaccatcatcaagtacacttaacaactcatagataacatcatgtaat 18933355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 99 - 150
Target Start/End: Complemental strand, 18757257 - 18757206
Alignment:
Q  99 atggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 150  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  18757257 atggcatttacaaccaacaataccgactcatgcaaatgacatgacaacaccg 18757206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 98 - 150
Target Start/End: Complemental strand, 8583561 - 8583509
Alignment:
Q  98 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 150  Q
    |||||||  ||||||||| ||||||||||||||||||||||||||||||||||    
T  8583561 tatggcaactacaaccaacaacaccgactcatgcaaatgacatgacaacaccg 8583509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 98 - 150
Target Start/End: Complemental strand, 13969128 - 13969076
Alignment:
Q  98 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 150  Q
    |||||||  ||||||||| ||||||||||||||||||||||||||||||||||    
T  13969128 tatggcaactacaaccaacaacaccgactcatgcaaatgacatgacaacaccg 13969076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 98 - 150
Target Start/End: Complemental strand, 13974603 - 13974551
Alignment:
Q  98 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 150  Q
    |||||||  ||||||||| ||||||||||||||||||||||||||||||||||    
T  13974603 tatggcaactacaaccaacaacaccgactcatgcaaatgacatgacaacaccg 13974551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 98 - 150
Target Start/End: Original strand, 14084441 - 14084493
Alignment:
Q  98 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 150  Q
    |||||||  ||||||||| ||||||||||||||||||||||||||||||||||    
T  14084441 tatggcaactacaaccaacaacaccgactcatgcaaatgacatgacaacaccg 14084493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 98 - 150
Target Start/End: Original strand, 14089842 - 14089894
Alignment:
Q  98 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 150  Q
    |||||||  ||||||||| ||||||||||||||||||||||||||||||||||    
T  14089842 tatggcaactacaaccaacaacaccgactcatgcaaatgacatgacaacaccg 14089894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 106 - 150
Target Start/End: Original strand, 20187584 - 20187628
Alignment:
Q  106 ttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 150  Q
    |||||||||| ||||||||||||||||||||||||||||||||||    
T  20187584 ttacaaccaacaacaccgactcatgcaaatgacatgacaacaccg 20187628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 98 - 150
Target Start/End: Original strand, 49399383 - 49399435
Alignment:
Q  98 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 150  Q
    |||||||  ||||||||| ||||||||||||||||||||||||||||||||||    
T  49399383 tatggcaactacaaccaacaacaccgactcatgcaaatgacatgacaacaccg 49399435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 7108238 - 7108317
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||| |||| ||||||||||||||| ||||||||| | |||||||||||| ||||||| |||||| || |||||| ||||    
T  7108238 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 7108317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 7112173 - 7112252
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||| |||| ||||||||||||||| ||||||||| | |||||||||||| ||||||| |||||| || |||||| ||||    
T  7112173 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 7112252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 11068613 - 11068692
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||| |||| ||||||||||||||| ||||||||| | |||||||||||| ||||||| |||||| || |||||| ||||    
T  11068613 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 11068692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 99 - 150
Target Start/End: Complemental strand, 11850956 - 11850905
Alignment:
Q  99 atggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 150  Q
    |||||| |||||||||| ||||| ||||||||||||||||||||||||||||    
T  11850956 atggcaattacaaccaacaacactgactcatgcaaatgacatgacaacaccg 11850905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 14497947 - 14498026
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||| |||| ||||||||||||||| ||||||||| | |||||||||||| ||||||| |||||| || |||||| ||||    
T  14497947 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 14498026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 22320129 - 22320208
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||| |||| ||||||||||||||| ||||||||| | |||||||||||| ||||||| |||||| || |||||| ||||    
T  22320129 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 22320208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 22335184 - 22335263
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||| |||| ||||||||||||||| ||||||||| | |||||||||||| ||||||| |||||| || |||||| ||||    
T  22335184 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 22335263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 98 - 149
Target Start/End: Complemental strand, 24123456 - 24123405
Alignment:
Q  98 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacacc 149  Q
    |||||||  ||||||||| |||||||||||||||||||||||||||||||||    
T  24123456 tatggcaactacaaccaacaacaccgactcatgcaaatgacatgacaacacc 24123405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 55021376 - 55021455
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||| |||| ||||||||||||||| ||||||||| | |||||||||||| ||||||| |||||| || |||||| ||||    
T  55021376 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 55021455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 98 - 148
Target Start/End: Complemental strand, 31690864 - 31690814
Alignment:
Q  98 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacac 148  Q
    ||||||| ||||| |||| ||||||||||||||||||||||||||||||||    
T  31690864 tatggcaattacatccaacaacaccgactcatgcaaatgacatgacaacac 31690814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 98 - 148
Target Start/End: Original strand, 31943351 - 31943401
Alignment:
Q  98 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacac 148  Q
    ||||||| ||||| |||| ||||||||||||||||||||||||||||||||    
T  31943351 tatggcaattacatccaacaacaccgactcatgcaaatgacatgacaacac 31943401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 98 - 150
Target Start/End: Complemental strand, 10598028 - 10597976
Alignment:
Q  98 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 150  Q
    ||||||| ||||||||||  ||||||||||||||||||||||||| |||||||    
T  10598028 tatggcaattacaaccaacgacaccgactcatgcaaatgacatgataacaccg 10597976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 192 - 266
Target Start/End: Complemental strand, 4108868 - 4108793
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtaca-tttaacaattcataggtaacatcat 266  Q
    |||| |||| ||||||||||||||| ||||||||| | |||||||||||| |||||||| |||||| || ||||||    
T  4108868 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacactttaacaactcatagatatcatcat 4108793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 192 - 266
Target Start/End: Complemental strand, 4112717 - 4112642
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtaca-tttaacaattcataggtaacatcat 266  Q
    |||| |||| ||||||||||||||| ||||||||| | |||||||||||| |||||||| |||||| || ||||||    
T  4112717 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacactttaacaactcatagatatcatcat 4112642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 11167172 - 11167093
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||| |||| ||||||||||||||| ||||||||| | |||||||||| | ||||||| |||||| || |||||| ||||    
T  11167172 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtaaacttaacaactcatagatatcatcatgtaat 11167093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 15616177 - 15616256
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||| |||| ||||||||||||||| ||||||||| | || ||||||||| ||||||| |||||| || |||||| ||||    
T  15616177 tcattaataaaagacaacttatcaatttaacataaacatcttcaagtacacttaacaactcatagatatcatcatgtaat 15616256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 28948461 - 28948540
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||| |||| ||||||||||||||| ||||||||| | |||||||||||| ||||||| | |||| || |||||| ||||    
T  28948461 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaacttatagatatcatcatgtaat 28948540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 149
Target Start/End: Complemental strand, 10597984 - 10597950
Alignment:
Q  115 ataacaccgactcatgcaaatgacatgacaacacc 149  Q
    |||||||||||||||||||||||||||||||||||    
T  10597984 ataacaccgactcatgcaaatgacatgacaacacc 10597950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 266
Target Start/End: Original strand, 15963497 - 15963571
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcat 266  Q
    ||||||||| |||||||||||| || ||||||||| | |||||||||||| |||| || |||||| || ||||||    
T  15963497 tcatgaataaaagacaacttattaatttaacataaacatcatcaagtacacttaataactcatagatatcatcat 15963571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 266
Target Start/End: Original strand, 15967421 - 15967495
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcat 266  Q
    ||||||||| |||||||||||| || ||||||||| | |||||||||||| |||| || |||||| || ||||||    
T  15967421 tcatgaataaaagacaacttattaatttaacataaacatcatcaagtacacttaataactcatagatatcatcat 15967495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 266
Target Start/End: Original strand, 15971345 - 15971419
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcat 266  Q
    ||||||||| |||||||||||| || ||||||||| | |||||||||||| |||| || |||||| || ||||||    
T  15971345 tcatgaataaaagacaacttattaatttaacataaacatcatcaagtacacttaataactcatagatatcatcat 15971419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 187
Target Start/End: Complemental strand, 16840492 - 16840460
Alignment:
Q  155 cactcaataataattcttcttaacatcccctta 187  Q
    |||||||||||||||||||||||||||||||||    
T  16840492 cactcaataataattcttcttaacatcccctta 16840460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 192 - 255
Target Start/End: Original strand, 12337257 - 12337319
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcata 255  Q
    ||||||||| ||||||||| ||||| ||||||||| | |||||||||||| ||||||| |||||    
T  12337257 tcatgaataaaagacaact-atcaatttaacataaacatcatcaagtacacttaacaactcata 12337319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 99 - 150
Target Start/End: Original strand, 12419275 - 12419326
Alignment:
Q  99 atggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 150  Q
    |||||| ||| ||| || |||||||||||||||||||||||||| |||||||    
T  12419275 atggcaattataactaacaacaccgactcatgcaaatgacatgaaaacaccg 12419326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 366
Target Start/End: Original strand, 13435937 - 13436027
Alignment:
Q  276 taacaaccccacattcaacacgataaaagatcattgtaacctcgtcatactcttcaacataaagaacgtaagcgtacaccacctcttataa 366  Q
    |||||||| || ||||||||| |||||   ||||  |||| |||||||| ||  ||||||||| ||||| || ||||||||||||||||||    
T  13435937 taacaacctcatattcaacaccataaacagtcatcataacatcgtcataatcaacaacataaacaacgtgagagtacaccacctcttataa 13436027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 340 - 385
Target Start/End: Complemental strand, 34852996 - 34852950
Alignment:
Q  340 aacgtaagcgtacaccacctcttat-aagcaacaacaaagtaagagt 385  Q
    |||||||| |||||||||||||||| || ||||||||||||||||||    
T  34852996 aacgtaagagtacaccacctcttataaaacaacaacaaagtaagagt 34852950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 385
Target Start/End: Complemental strand, 8928730 - 8928686
Alignment:
Q  340 aacgtaagcgtacaccacctcttataagcaacaacaaagtaagagt 385  Q
    |||||||| ||||||||||||||||||  |||||||||||||||||    
T  8928730 aacgtaagagtacaccacctcttataa-aaacaacaaagtaagagt 8928686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 366
Target Start/End: Complemental strand, 8928842 - 8928737
Alignment:
Q  261 catcatataatatcctaacaaccccacattcaacacgataaaagatcattgtaacctcgtcatactcttcaacataaagaacgtaagcgtacaccacctc 360  Q
    |||||| ||| ||| |||||||| || ||||||| | ||||||  ||||  |||| |||||||| ||  ||||||||| ||||| || ||||||||||||    
T  8928842 catcatgtaacatcataacaacctcatattcaactccataaaaagtcatcataacatcgtcataatcaacaacataaacaacgtgagagtacaccacctc 8928743  T
Q  361 ttataa 366  Q
    | ||||    
T  8928742 tcataa 8928737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2015 (Bit Score: 125; Significance: 3e-64; HSPs: 2)
Name: scaffold2015
Description:

Target: scaffold2015; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 98 - 267
Target Start/End: Complemental strand, 604 - 443
Alignment:
Q  98 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccgtatgcactcaataataattcttcttaacatccccttaatgctcatga 197  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  604 tatggcatttacaaccaacaacaccgactcatgcaaatgacatgacaacaccgtatgcactcaataataattcttcttaacatccccttaatgctcatga 505  T
Q  198 atagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcata 267  Q
    |||||||||||        ||||||||||||||| || |||||||||||||| |||||||||||||||||    
T  504 atagaagacaa--------cttaacataaccctcctcgagtacatttaacaactcataggtaacatcata 443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2015; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 315 - 385
Target Start/End: Complemental strand, 441 - 371
Alignment:
Q  315 cctcgtcatactcttcaacataaagaacgtaagcgtacaccacctcttataagcaacaacaaagtaagagt 385  Q
    |||| |||||||| |||||||||| |||||||| |||||||||||||||||  ||||||||||||||||||    
T  441 cctcatcatactcatcaacataaacaacgtaagagtacaccacctcttatagacaacaacaaagtaagagt 371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 123; Significance: 4e-63; HSPs: 49)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 192 - 366
Target Start/End: Original strand, 23955369 - 23955543
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataatatcctaacaaccccacattc 291  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||| ||||||| ||||||||||||||||    
T  23955369 tcatgaataaaagacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaatatcataacaaccccacattc 23955468  T
Q  292 aacacgataaaagatcattgtaacctcgtcatactcttcaacataaagaacgtaagcgtacaccacctcttataa 366  Q
    ||||  ||||||||||||  |||||||||||||||| |||||||||| |||||||| ||||||||||||||||||    
T  23955469 aacatcataaaagatcatcataacctcgtcatactcatcaacataaacaacgtaagagtacaccacctcttataa 23955543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 98 - 267
Target Start/End: Complemental strand, 14594826 - 14594665
Alignment:
Q  98 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccgtatgcactcaataataattcttcttaacatccccttaatgctcatga 197  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14594826 tatggcatttacaacaaacaacaccgactcatgcaaatgacatgacaacaccgtatgcactcaataataattcttcttaacatccccttaatgctcatga 14594727  T
Q  198 atagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcata 267  Q
    |||||||||||        ||||||||||||||| || |||||||||||||| |||||||||||||||||    
T  14594726 atagaagacaa--------cttaacataaccctcctcgagtacatttaacaactcataggtaacatcata 14594665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 158 - 385
Target Start/End: Original strand, 28707833 - 28708052
Alignment:
Q  158 tcaataataattcttcttaacatccccttaatgctcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcatagg 257  Q
    |||||||||||||| |||||||| | |||| ||||||||||||||||        ||||||||||||||||||||||||||||||||||||| |||||||    
T  28707833 tcaataataattctccttaacattctcttagtgctcatgaatagaag--------tcaacttaacataaccctcatcaagtacatttaacaactcatagg 28707924  T
Q  258 taacatcatataatatcctaacaaccccacattcaacacgataaaagatcattgtaacctcgtcatactcttcaacataaagaacgtaagcgtacaccac 357  Q
    |||| |||| ||||||| |||||||| | |||||||||| ||| ||||||||  |||||||||||||||| |||||||||| |||||||| |||||||||    
T  28707925 taacctcatgtaatatcataacaacctcgcattcaacactatagaagatcatcataacctcgtcatactcatcaacataaacaacgtaagagtacaccac 28708024  T
Q  358 ctcttataagcaacaacaaagtaagagt 385  Q
    ||||||||  |||||||||| |||||||    
T  28708025 ctcttatagacaacaacaaaataagagt 28708052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 98 - 267
Target Start/End: Original strand, 7429341 - 7429502
Alignment:
Q  98 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccgtatgcactcaataataattcttcttaacatccccttaatgctcatga 197  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  7429341 tatgacatttacaaccaacaacaccgactcatgcaaatgacatgacaacactgtatgcactcaataataattcttcttaacatccccttaatgctcatga 7429440  T
Q  198 atagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcata 267  Q
    ||||||||        |||||||||||||||| | || |||||||||||||| |||||||||||| ||||    
T  7429441 atagaaga--------caacttaacataacccccctcgagtacatttaacaactcataggtaacaccata 7429502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 155 - 385
Target Start/End: Complemental strand, 9623020 - 9622799
Alignment:
Q  155 cactcaataataattcttcttaacatccccttaatgctcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcat 254  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||         ||||||||||||||||||||||| ||||| ||||    
T  9623020 cactcaataataattcttcttaacatccccttagtgctcatgaatagaagacaacttt--------acataaccctcatcaagtacatt-aacaactcat 9622930  T
Q  255 aggtaacatcatataatatcctaacaaccccacattcaacacgataaaagatcattgtaacctcgtcatactcttcaacataaagaacgtaagcgtacac 354  Q
    |||||||||||| ||||||| |||||||| |||||||||||  ||| |  |||||  ||| |||||||||||| ||||||||||  ||||||| ||||||    
T  9622929 aggtaacatcatgtaatatcataacaacctcacattcaacattatagagaatcatcataagctcgtcatactcatcaacataaaccacgtaagagtacac 9622830  T
Q  355 cacctcttataagcaacaacaaagtaagagt 385  Q
    ||||||| |||  ||||||||| ||||||||    
T  9622829 cacctctcatagacaacaacaaggtaagagt 9622799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 205 - 374
Target Start/End: Complemental strand, 34297838 - 34297669
Alignment:
Q  205 acaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataatatcctaacaaccccacattcaacacgataaaag 304  Q
    |||||||||||||||||||||||| ||| |||||||||||||||| |||||| ||||||||| ||| |||  |||| ||   |||||||||| |||||      
T  34297838 acaacttatcaacttaacataaccatcagcaagtacatttaacaactcatagataacatcatgtaacatcaaaacagcctttcattcaacactataaaca 34297739  T
Q  305 atcattgtaacctcgtcatactcttcaacataaagaacgtaagcgtacaccacctcttataagcaacaac 374  Q
    |||||  |||| |||||||| || |||||||||| |||||||| |||| ||||||||||||| |||||||    
T  34297738 atcatcataacatcgtcataatcatcaacataaacaacgtaagagtacgccacctcttataaacaacaac 34297669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 204 - 374
Target Start/End: Original strand, 25737904 - 25738074
Alignment:
Q  204 gacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataatatcctaacaaccccacattcaacacgataaaa 303  Q
    ||||||||||||||||| ||||| | |||||||||||||||| ||| |||||| ||||||||| ||| ||| ||| |||| |||| ||||||| |||||     
T  25737904 gacaacttatcaacttagcataatcatcatcaagtacatttaccaactcatagataacatcatgtaacatcataaaaacctcacactcaacactataaac 25738003  T
Q  304 gatcattgtaacctcgtcatactcttcaacataaagaacgtaagcgtacaccacctcttataagcaacaac 374  Q
     |||||  ||||||||||||| || |||||||||  |||||||| ||||| || ||||||||| |||||||    
T  25738004 aatcatcataacctcgtcataatcatcaacataaccaacgtaagagtacatcatctcttataaacaacaac 25738074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 191 - 271
Target Start/End: Complemental strand, 18918660 - 18918580
Alignment:
Q  191 ctcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||| ||||||||| ||||    
T  18918660 ctcatgaatagaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcctagataacatcatgtaat 18918580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 27222832 - 27222911
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||| |||||    
T  27222832 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcacataat 27222911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 192 - 264
Target Start/End: Original strand, 12941221 - 12941293
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatc 264  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||    
T  12941221 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatc 12941293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 192 - 270
Target Start/End: Original strand, 4475795 - 4475873
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataa 270  Q
    ||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||| |||||  |||||||| ||||    
T  4475795 tcatgaataaaagacaacttatcaacttaacataacaatcatcaagtacatttaacaactcataaataacatcacataa 4475873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 194 - 264
Target Start/End: Complemental strand, 28290971 - 28290901
Alignment:
Q  194 atgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatc 264  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| | |||| |||||||    
T  28290971 atgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaacttatagataacatc 28290901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 312 - 385
Target Start/End: Original strand, 7429501 - 7429574
Alignment:
Q  312 taacctcgtcatactcttcaacataaagaacgtaagcgtacaccacctcttataagcaacaacaaagtaagagt 385  Q
    ||||||| |||||||| |||||||||| |||||||| |||||||||||||||||  ||||||||||||||||||    
T  7429501 taacctcatcatactcatcaacataaacaacgtaagagtacaccacctcttatagacaacaacaaagtaagagt 7429574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 191 - 271
Target Start/End: Complemental strand, 18953563 - 18953483
Alignment:
Q  191 ctcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||| || ||| | ||||||| ||||    
T  18953563 ctcatgaatagaagacaacttatcgacttaacataatcatcatcaagtacatttaacaactcctagatgacatcatgtaat 18953483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 23400677 - 23400757
Alignment:
Q  192 tcatgaatagaagacaacttatcaactt-aacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| | |||||||||||||||| ||||||||| |||||||||||||||||||| |||||| ||||||||| ||||    
T  23400677 tcatgaataaaggacaacttatcaactttaacataaccatcatcaagtacatttaacaactcatagataacatcatgtaat 23400757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 2076286 - 2076365
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| || |||||||||||||||||||||| | ||||||| |||||||||||| |||||| ||||||||| ||||    
T  2076286 tcatgaataaaaaacaacttatcaacttaacataatcatcatcaaatacatttaacaactcatagataacatcatgtaat 2076365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 204 - 271
Target Start/End: Original strand, 23537993 - 23538060
Alignment:
Q  204 gacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| ||||||  |||||||| ||||    
T  23537993 gacaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagacaacatcatgtaat 23538060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 31479541 - 31479462
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| ||||||||||||||||||||||||| | ||||||| |||||||||||| |||||| ||| ||||| ||||    
T  31479541 tcatgaataaaagacaacttatcaacttaacataaacatcatcaaatacatttaacaactcatagataatatcatgtaat 31479462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 159 - 212
Target Start/End: Original strand, 1254037 - 1254090
Alignment:
Q  159 caataataattcttcttaacatccccttaatgctcatgaatagaagacaactta 212  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  1254037 caataataattcttcttaacatccccttagtactcatgaatagaagacaactta 1254090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 207 - 271
Target Start/End: Original strand, 16622850 - 16622914
Alignment:
Q  207 aacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||| ||| ||||| ||||    
T  16622850 aacttatcaacttaacataaacatcatcaagtacatttaacaattcatagataatatcatgtaat 16622914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 192 - 256
Target Start/End: Complemental strand, 22075469 - 22075405
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcatag 256  Q
    ||||||||| ||||||||||||||||||||||||| | |||||||||||| ||||||| ||||||    
T  22075469 tcatgaataaaagacaacttatcaacttaacataaacatcatcaagtacacttaacaactcatag 22075405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 205 - 256
Target Start/End: Original strand, 1254172 - 1254223
Alignment:
Q  205 acaacttatcaacttaacataaccctcatcaagtacatttaacaattcatag 256  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  1254172 acaacttatcaacttaacataaccatcatcaagtacatttaacaactcatag 1254223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 385
Target Start/End: Complemental strand, 14594663 - 14594593
Alignment:
Q  315 cctcgtcatactcttcaacataaagaacgtaagcgtacaccacctcttataagcaacaacaaagtaagagt 385  Q
    |||| |||||||| |||||||||| |||||||| ||||||||||||||||   ||||||||||||||||||    
T  14594663 cctcatcatactcatcaacataaacaacgtaagagtacaccacctcttatggacaacaacaaagtaagagt 14594593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 192 - 266
Target Start/End: Original strand, 19869187 - 19869261
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcat 266  Q
    ||||||||| ||||||||||||||| ||||||||| | |||||||||||| ||||||| |||||| || ||||||    
T  19869187 tcatgaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcat 19869261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 98 - 148
Target Start/End: Complemental strand, 23235196 - 23235146
Alignment:
Q  98 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacac 148  Q
    ||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  23235196 tatggcaattacaaccaacaacaccgactcatgcaaatgacatgacaacac 23235146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 192 - 266
Target Start/End: Original strand, 23393641 - 23393715
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcat 266  Q
    ||||||||| ||||||||||||||| ||||||||| | |||||||||||| ||||||| |||||| || ||||||    
T  23393641 tcatgaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcat 23393715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 192 - 266
Target Start/End: Original strand, 23413549 - 23413623
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcat 266  Q
    ||||||||| ||||||||||||||| ||||||||| | |||||||||||| ||||||| |||||| || ||||||    
T  23413549 tcatgaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcat 23413623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 159 - 212
Target Start/End: Complemental strand, 34297969 - 34297916
Alignment:
Q  159 caataataattcttcttaacatccccttaatgctcatgaatagaagacaactta 212  Q
    ||||||||||||||||||||||| ||||| | ||||||||||||||||||||||    
T  34297969 caataataattcttcttaacatcgccttagtactcatgaatagaagacaactta 34297916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 98 - 150
Target Start/End: Original strand, 24562192 - 24562244
Alignment:
Q  98 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 150  Q
    |||||||  ||||||||| ||||||||||||||||||||||||||||||||||    
T  24562192 tatggcaactacaaccaacaacaccgactcatgcaaatgacatgacaacaccg 24562244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 192 - 256
Target Start/End: Complemental strand, 27416606 - 27416542
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcatag 256  Q
    ||||||||| |||||||| |||||||||||||||| | |||||||||||| ||||||| ||||||    
T  27416606 tcatgaataaaagacaacctatcaacttaacataaacatcatcaagtacacttaacaactcatag 27416542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 8242412 - 8242491
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||| |||| ||||||||||||||| ||||||||| | |||||||||||| ||||||| |||||| || |||||| ||||    
T  8242412 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 8242491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 11565401 - 11565480
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||| |||| ||||||||||||||| ||||||||| | |||||||||||| ||||||| |||||| || |||||| ||||    
T  11565401 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 11565480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 11717019 - 11716940
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||| |||| ||||||||||||||| ||||||||| | |||||||||||| ||||||| |||||| || |||||| ||||    
T  11717019 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 11716940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 12620412 - 12620333
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||| |||| ||||||||||||||| ||||||||| | |||||||||||| ||||||| |||||| || |||||| ||||    
T  12620412 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 12620333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 27555540 - 27555618
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| ||||||||| ||||||||||||||| | |||||||||||| ||||||| |||||| || |||||| ||||    
T  27555540 tcatgaataaaagacaact-atcaacttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 27555618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 160 - 218
Target Start/End: Original strand, 25737775 - 25737833
Alignment:
Q  160 aataataattcttcttaacatccccttaatgctcatgaatagaagacaacttatcaact 218  Q
    |||||||||||||| |||||||||||||   |||||||||||||||||||||| |||||    
T  25737775 aataataattcttcataacatccccttagccctcatgaatagaagacaacttaacaact 25737833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 197 - 266
Target Start/End: Original strand, 22947672 - 22947741
Alignment:
Q  197 aatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcat 266  Q
    |||| ||||||||||||||| ||||||||| | |||||||||||| ||||||| |||||| || ||||||    
T  22947672 aataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcat 22947741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 197 - 266
Target Start/End: Original strand, 22951628 - 22951697
Alignment:
Q  197 aatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcat 266  Q
    |||| ||||||||||||||| ||||||||| | |||||||||||| ||||||| |||||| || ||||||    
T  22951628 aataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcat 22951697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 197 - 266
Target Start/End: Original strand, 23870116 - 23870185
Alignment:
Q  197 aatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcat 266  Q
    |||| ||||||||||||||| ||||||||| | |||||||||||| ||||||| |||||| || ||||||    
T  23870116 aataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcat 23870185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 197 - 266
Target Start/End: Original strand, 23874072 - 23874141
Alignment:
Q  197 aatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcat 266  Q
    |||| ||||||||||||||| ||||||||| | |||||||||||| ||||||| |||||| || ||||||    
T  23874072 aataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcat 23874141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 99 - 150
Target Start/End: Complemental strand, 5290435 - 5290384
Alignment:
Q  99 atggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 150  Q
    |||||| |||||||||| ||||| |||||||||||||||||||| |||||||    
T  5290435 atggcaattacaaccaacaacactgactcatgcaaatgacatgataacaccg 5290384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 192 - 255
Target Start/End: Original strand, 14470881 - 14470944
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcata 255  Q
    ||||||||| |||||||||||||||| |||||||| | ||||||||||||  |||||| |||||    
T  14470881 tcatgaataaaagacaacttatcaacctaacataaacatcatcaagtacacctaacaactcata 14470944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 22861755 - 22861834
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||| |||| ||||||||||||||| ||||||||| | ||| |||||||| ||||||| |||||| || |||||| ||||    
T  22861755 tcattaataaaagacaacttatcaatttaacataaacatcaccaagtacacttaacaactcatagatatcatcatgtaat 22861834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 23988303 - 23988382
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||| |||| ||||||||||||||| |||| |||| | |||||||||||| ||||||| |||||| || |||||| ||||    
T  23988303 tcattaataaaagacaacttatcaatttaatataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 23988382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 99 - 150
Target Start/End: Complemental strand, 26418960 - 26418909
Alignment:
Q  99 atggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 150  Q
    |||||| ||| |||||| |||||| |||||||||||||||||||||||||||    
T  26418960 atggcaattataaccaacaacaccaactcatgcaaatgacatgacaacaccg 26418909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 266
Target Start/End: Original strand, 16758715 - 16758789
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcat 266  Q
    |||| |||| ||||||||||||||| ||||||||| | |||||||||||| |||| || |||||| || ||||||    
T  16758715 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaataactcatagatatcatcat 16758789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 148
Target Start/End: Complemental strand, 5290392 - 5290359
Alignment:
Q  115 ataacaccgactcatgcaaatgacatgacaacac 148  Q
    ||||||||||||||||||| ||||||||||||||    
T  5290392 ataacaccgactcatgcaactgacatgacaacac 5290359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 340 - 376
Target Start/End: Original strand, 20182531 - 20182567
Alignment:
Q  340 aacgtaagcgtacaccacctcttataagcaacaacaa 376  Q
    |||||||| |||||||||||||||||| |||||||||    
T  20182531 aacgtaagagtacaccacctcttataaacaacaacaa 20182567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 340 - 376
Target Start/End: Complemental strand, 22153460 - 22153424
Alignment:
Q  340 aacgtaagcgtacaccacctcttataagcaacaacaa 376  Q
    |||||||| |||||||||||||||||| |||||||||    
T  22153460 aacgtaagagtacaccacctcttataaacaacaacaa 22153424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 123; Significance: 4e-63; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 192 - 366
Target Start/End: Original strand, 28384851 - 28385025
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataatatcctaacaaccccacattc 291  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||| ||||||||||||||||    
T  28384851 tcatgaataaaagacaacttatcaacttaacataaccctcatcaagtacatttaacaactcataggtaacctcatgtaatatcataacaaccccacattc 28384950  T
Q  292 aacacgataaaagatcattgtaacctcgtcatactcttcaacataaagaacgtaagcgtacaccacctcttataa 366  Q
    ||||  ||||||||||||  |||| ||||||||||| |||||||||| |||||||| ||||||||||||||||||    
T  28384951 aacatcataaaagatcatcataacatcgtcatactcatcaacataaacaacgtaagagtacaccacctcttataa 28385025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 155 - 385
Target Start/End: Complemental strand, 37839299 - 37839077
Alignment:
Q  155 cactcaataataattcttcttaacatccccttaatgctcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcat 254  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||        ||||||||||||||||||||||||||||| |  |    
T  37839299 cactcaataataattctccttaacatccccttagtgctcatgaatagaagacaactta--------acataaccctcatcaagtacatttaacaacttgt 37839208  T
Q  255 aggtaacatcatataatatcctaacaaccccacattcaacacgataaaagatcattgtaacctcgtcatactcttcaacataaagaacgtaagcgtacac 354  Q
    ||||||| || | ||||||| |||||||| | |||||||||| ||| ||||||||  |||||||||||||||| |||||||||| || ||||| ||||||    
T  37839207 aggtaacctcgtgtaatatcataacaacctcgcattcaacactatagaagatcatcataacctcgtcatactcatcaacataaacaaagtaagagtacac 37839108  T
Q  355 cacctcttataagcaacaacaaagtaagagt 385  Q
    |||||||||||  ||||||||||||||||||    
T  37839107 cacctcttatagacaacaacaaagtaagagt 37839077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 155 - 385
Target Start/End: Complemental strand, 42598028 - 42597806
Alignment:
Q  155 cactcaataataattcttcttaacatccccttaatgctcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcat 254  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||        ||||||||||||||||||||||||||||| |  |    
T  42598028 cactcaataataattctccttaacatccccttagtgctcatgaatagaagacaactta--------acataaccctcatcaagtacatttaacaactttt 42597937  T
Q  255 aggtaacatcatataatatcctaacaaccccacattcaacacgataaaagatcattgtaacctcgtcatactcttcaacataaagaacgtaagcgtacac 354  Q
    ||||||| || | ||||||| |||||||| | |||||||||  ||| ||||||||  |||||||||||||||| |||||||||| || ||||| ||||||    
T  42597936 aggtaacctcttgtaatatcataacaacctctcattcaacattatataagatcatcataacctcgtcatactcatcaacataaacaaagtaagagtacac 42597837  T
Q  355 cacctcttataagcaacaacaaagtaagagt 385  Q
    |||||||||||  ||||||||||||||||||    
T  42597836 cacctcttatagacaacaacaaagtaagagt 42597806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 191 - 271
Target Start/End: Complemental strand, 631827 - 631747
Alignment:
Q  191 ctcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||| ||||    
T  631827 ctcatgaatagaatacaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcatgtaat 631747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 191 - 271
Target Start/End: Original strand, 10711824 - 10711904
Alignment:
Q  191 ctcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||| ||||||||| ||||    
T  10711824 ctcatgaatagaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcctagataacatcatgtaat 10711904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 191 - 271
Target Start/End: Original strand, 10925594 - 10925674
Alignment:
Q  191 ctcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||| ||||||||| ||||    
T  10925594 ctcatgaatagaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcctagataacatcatgtaat 10925674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 15533219 - 15533298
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||| |||||    
T  15533219 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcacataat 15533298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 22635005 - 22634926
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||| ||||    
T  22635005 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcatgtaat 22634926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 24048463 - 24048384
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||| ||||    
T  24048463 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcatgtaat 24048384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 191 - 271
Target Start/End: Original strand, 27532751 - 27532831
Alignment:
Q  191 ctcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| || ||| ||||||||| ||||    
T  27532751 ctcatgaatagaaggcaacttatcaacttaacataaccatcatcaagtacatttaacaactcctagataacatcatgtaat 27532831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 192 - 264
Target Start/End: Original strand, 36036952 - 36037024
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatc 264  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||    
T  36036952 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatc 36037024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 12422943 - 12423022
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||| |||||| ||||||||| ||||    
T  12422943 tcatgaataaaagacaacttatcaacttaacataactatcatcaagtacatttaacaactcatagataacatcatgtaat 12423022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 17052524 - 17052445
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||| |||||| ||||||||| ||||    
T  17052524 tcatgaataaaagacaacttatcaacttaacataatcatcatcaagtacatttaacaactcatagataacatcatgtaat 17052445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 18211604 - 18211683
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||||| |||||| |||||||| |||||    
T  18211604 tcatgaataaaagacaacttatcaactcaacataaccatcatcaagtacatttaacaactcatagataacatcacataat 18211683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 192 - 256
Target Start/End: Original strand, 30145783 - 30145847
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcatag 256  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  30145783 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcatag 30145847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 13813911 - 13813832
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||| | ||| ||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||| ||||    
T  13813911 tcatgaacaaaaggcaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcatgtaat 13813832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 13818399 - 13818320
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| ||  ||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||| ||||    
T  13818399 tcatgaataaaatgcaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcatgtaat 13818320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 15223546 - 15223625
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||| |||||| ||| ||||| ||||    
T  15223546 tcatgaataaaagacaacttatcaacttaacataaacatcatcaagtacatttaacaactcatagataatatcatgtaat 15223625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 49549162 - 49549082
Alignment:
Q  192 tcatgaatagaagacaact-tatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| ||||||||  |||||||||||||||||| |||||||||||||||||||| |||||| |||||||| |||||    
T  49549162 tcatgaataaaagacaacggtatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcacataat 49549082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 20158526 - 20158447
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| ||||||||||||||||||||||||| | |||||||||||| ||||||| |||||| || |||||| ||||    
T  20158526 tcatgaataaaagacaacttatcaacttaacataagcatcatcaagtacacttaacaactcatagatatcatcatgtaat 20158447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 20163977 - 20163898
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| ||||||||||||||||||||||||| | |||||||||||| ||||||| |||||| || |||||| ||||    
T  20163977 tcatgaataaaagacaacttatcaacttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 20163898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 23997044 - 23996966
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| |||| |||||||||||||| ||||||| |||||||||||||||||||| |||||| ||||||||| ||||    
T  23997044 tcatgaataaaagagaacttatcaactta-cataaccatcatcaagtacatttaacaactcatagataacatcatgtaat 23996966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 98 - 150
Target Start/End: Original strand, 13452110 - 13452162
Alignment:
Q  98 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 150  Q
    ||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  13452110 tatggcaattacaaccaacaacaccgactcatgcaaatgacatgacaacaccg 13452162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 195 - 271
Target Start/End: Complemental strand, 20161199 - 20161123
Alignment:
Q  195 tgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||||| ||||||||||||||||||||||||| | | |||||||||| ||||||| |||||| || |||||| ||||    
T  20161199 tgaataaaagacaacttatcaacttaacataaacattatcaagtacacttaacaactcatagatatcatcatgtaat 20161123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 4562852 - 4562773
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||| |||| ||||||||||||||| ||||||||| | |||||||||||| ||||||| |||||| || |||||| ||||    
T  4562852 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 4562773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 5758534 - 5758455
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||| |||| ||||||||||||||| ||||||||| | |||||||||||| ||||||| |||||| || |||||| ||||    
T  5758534 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 5758455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 9555069 - 9555148
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||| |||| ||||||||||||||| ||||||||| | |||||||||||| ||||||| |||||| || |||||| ||||    
T  9555069 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 9555148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 12486271 - 12486350
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||| |||| ||||||||||||||| ||||||||| | |||||||||||| ||||||| |||||| || |||||| ||||    
T  12486271 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 12486350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 14759070 - 14758991
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||| |||| ||||||||||||||| ||||||||| | |||||||||||| ||||||| |||||| || |||||| ||||    
T  14759070 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 14758991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 14955838 - 14955759
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||| |||| ||||||||||||||| ||||||||| | |||||||||||| ||||||| |||||| || |||||| ||||    
T  14955838 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 14955759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 17807054 - 17807133
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||| |||| ||||||||||||||| ||||||||| | |||||||||||| ||||||| |||||| || |||||| ||||    
T  17807054 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 17807133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 33740836 - 33740915
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||| |||| ||||||||||||||| ||||||||| | |||||||||||| ||||||| |||||| || |||||| ||||    
T  33740836 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 33740915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 197 - 271
Target Start/End: Original strand, 25688447 - 25688521
Alignment:
Q  197 aatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||| ||||||||||||||| ||||||||| | |||||||||||| ||||||| |||||| || |||||| ||||    
T  25688447 aataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 25688521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 101 - 150
Target Start/End: Original strand, 37881282 - 37881331
Alignment:
Q  101 ggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 150  Q
    |||| |||||||||| ||||||||||||||||||||||||||| ||||||    
T  37881282 ggcaattacaaccaacaacaccgactcatgcaaatgacatgactacaccg 37881331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 117 - 150
Target Start/End: Original strand, 13452156 - 13452189
Alignment:
Q  117 aacaccgactcatgcaaatgacatgacaacaccg 150  Q
    ||||||||||||||||||||||||||||||||||    
T  13452156 aacaccgactcatgcaaatgacatgacaacaccg 13452189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 271
Target Start/End: Original strand, 38106945 - 38107025
Alignment:
Q  191 ctcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||||||||  ||||||| ||||||||||||||||| | |||||||  | ||||||||| ||||||  |||||||| ||||    
T  38106945 ctcatgaatgaaagacaatttatcaacttaacataaacatcatcaatcatatttaacaactcatagacaacatcatgtaat 38107025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 340 - 385
Target Start/End: Original strand, 30146219 - 30146265
Alignment:
Q  340 aacgtaagcgtacaccacctcttat-aagcaacaacaaagtaagagt 385  Q
    |||||||| |||||||||||||||| || ||||||||||||||||||    
T  30146219 aacgtaagagtacaccacctcttataaaacaacaacaaagtaagagt 30146265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 109 - 149
Target Start/End: Complemental strand, 10977265 - 10977225
Alignment:
Q  109 caaccaataacaccgactcatgcaaatgacatgacaacacc 149  Q
    ||||||| || | ||||||||||||||||||||||||||||    
T  10977265 caaccaacaataacgactcatgcaaatgacatgacaacacc 10977225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 191 - 235
Target Start/End: Original strand, 14047317 - 14047361
Alignment:
Q  191 ctcatgaatagaagacaacttatcaacttaacataaccctcatca 235  Q
    |||||||||| || |||||||||||||||||||||| | ||||||    
T  14047317 ctcatgaataaaatacaacttatcaacttaacataatcatcatca 14047361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 106; Significance: 6e-53; HSPs: 3)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 218 - 363
Target Start/End: Complemental strand, 173278 - 173133
Alignment:
Q  218 ttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataatatcctaacaaccccacattcaacacgataaaagatcattgtaacct 317  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||  ||||||    
T  173278 ttaacataaccctcatcaagtacatttaacaactaataggtaacatcatataatatcataacaacctcacattcaacactataaaagatcatcataacct 173179  T
Q  318 cgtcatactcttcaacataaagaacgtaagcgtacaccacctctta 363  Q
    |||||||||| |||||||||| |||||||| |||||||||||||||    
T  173178 cgtcatactcatcaacataaacaacgtaagagtacaccacctctta 173133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 155 - 197
Target Start/End: Complemental strand, 173324 - 173282
Alignment:
Q  155 cactcaataataattcttcttaacatccccttaatgctcatga 197  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  173324 cactcaataataattcttcttaacatccccttagtgctcatga 173282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 385
Target Start/End: Complemental strand, 173127 - 173082
Alignment:
Q  340 aacgtaagcgtacaccacctcttataagcaacaacaaagtaagagt 385  Q
    |||||||| || | ||||||||||||| ||||||||||||||||||    
T  173127 aacgtaagagtgccccacctcttataaacaacaacaaagtaagagt 173082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679 (Bit Score: 101; Significance: 6e-50; HSPs: 1)
Name: scaffold0679
Description:

Target: scaffold0679; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 221 - 385
Target Start/End: Complemental strand, 3315 - 3151
Alignment:
Q  221 acataaccctcatcaagtacatttaacaattcataggtaacatcatataatatcctaacaaccccacattcaacacgataaaagatcattgtaacctcgt 320  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||| ||||||| |||||||| | |||||||||| ||| ||||||||  |||||||||    
T  3315 acataaccctcatcaagtacatttaacaactcataggtaacctcatgtaatatcataacaacctcgcattcaacactatagaagatcatcataacctcgt 3216  T
Q  321 catactcttcaacataaagaacgtaagcgtacaccacctcttataagcaacaacaaagtaagagt 385  Q
    ||||||| |||||||||| |||||||| |||||||||||||||||  |||||||||| |||||||    
T  3215 catactcatcaacataaacaacgtaagagtacaccacctcttatagacaacaacaaaataagagt 3151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815 (Bit Score: 98; Significance: 4e-48; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 175 - 385
Target Start/End: Original strand, 1 - 203
Alignment:
Q  175 taacatccccttaatgctcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataatatc 274  Q
    ||||||| ||||| ||||||||||||||||||| ||||        ||||||||||||||||||||||||||||| ||| ||||||| |||| |||||||    
T  1 taacatctccttagtgctcatgaatagaagacagctta--------acataaccctcatcaagtacatttaacaactcaaaggtaacctcatgtaatatc 92  T
Q  275 ctaacaaccccacattcaacacgataaaagatcattgtaacctcgtcatactcttcaacataaagaacgtaagcgtacaccacctcttataagcaacaac 374  Q
     |||||||| | |||||||||| ||| ||||||||  |||||||||||||||| |||||||||| || ||||| ||||||||||||||| |  |||||||    
T  93 ataacaacctcgcattcaacactatagaagatcatcataacctcgtcatactcatcaacataaacaaagtaagagtacaccacctcttaaagacaacaac 192  T
Q  375 aaagtaagagt 385  Q
    |||||||||||    
T  193 aaagtaagagt 203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 72; Significance: 1e-32; HSPs: 4)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 251 - 366
Target Start/End: Original strand, 175425 - 175540
Alignment:
Q  251 tcataggtaacatcatataatatcctaacaaccccacattcaacacgataaaagatcattgtaacctcgtcatactcttcaacataaagaacgtaagcgt 350  Q
    ||||||||||| |||| ||||||| ||||||||||||||||||||  ||||||||||||  |||||||||||||||| |||||||||| || ||||| ||    
T  175425 tcataggtaacctcatgtaatatcataacaaccccacattcaacatcataaaagatcatcataacctcgtcatactcatcaacataaacaatgtaagagt 175524  T
Q  351 acaccacctcttataa 366  Q
    ||||||||||||||||    
T  175525 acaccacctcttataa 175540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 155 - 218
Target Start/End: Complemental strand, 163768 - 163705
Alignment:
Q  155 cactcaataataattcttcttaacatccccttaatgctcatgaatagaagacaacttatcaact 218  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| |||||    
T  163768 cactcaataataattcttcttaacatccccttagtactcatgaatagaagacaacttaacaact 163705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 276 - 385
Target Start/End: Complemental strand, 163594 - 163487
Alignment:
Q  276 taacaaccccacattcaacacgataaaagatcattgtaacctcgtcatactcttcaacataaagaacgtaagcgtacaccacctcttataagcaacaaca 375  Q
    |||||||| |||||||||||| |||||  ||| |   ||| |||||||| || |||||||||| |||||||| ||||||||||||||||||  ||| |||    
T  163594 taacaacctcacattcaacactataaacaatcgtcacaacatcgtcataatcatcaacataaacaacgtaagagtacaccacctcttataa--aacgaca 163497  T
Q  376 aagtaagagt 385  Q
    ||||||||||    
T  163496 aagtaagagt 163487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 205 - 249
Target Start/End: Complemental strand, 163633 - 163589
Alignment:
Q  205 acaacttatcaacttaacataaccctcatcaagtacatttaacaa 249  Q
    |||| ||||||||||||||||||||||||||||||||||||||||    
T  163633 acaagttatcaacttaacataaccctcatcaagtacatttaacaa 163589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 191 - 271
Target Start/End: Original strand, 3973 - 4053
Alignment:
Q  191 ctcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||| ||||||||| ||||    
T  3973 ctcatgaatagaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcctagataacatcatgtaat 4053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 191 - 271
Target Start/End: Complemental strand, 24017 - 23937
Alignment:
Q  191 ctcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||| ||||||||| ||||    
T  24017 ctcatgaatagaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcctagataacatcatgtaat 23937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 191 - 271
Target Start/End: Complemental strand, 62919 - 62839
Alignment:
Q  191 ctcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||| ||||||||| ||||    
T  62919 ctcatgaatagaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcctagataacatcatgtaat 62839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 191 - 271
Target Start/End: Complemental strand, 74411 - 74331
Alignment:
Q  191 ctcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||| ||||    
T  74411 ctcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcatgtaat 74331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1427 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold1427
Description:

Target: scaffold1427; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 200 - 279
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||| |||||    
T  200 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcacataat 279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 7039 - 6960
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||| ||||    
T  7039 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcatgtaat 6960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 10900 - 10821
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||| |||||    
T  10900 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcacataat 10821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 60; Significance: 2e-25; HSPs: 3)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 155 - 267
Target Start/End: Original strand, 34025 - 34129
Alignment:
Q  155 cactcaataataattcttcttaacatccccttaatgctcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcat 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||        |||| ||||||||| ||| || |||||||||||||| ||||    
T  34025 cactcaataataattcttcttaacatccccttaatgctcatgaatagcaga--------caacctaacataacactcctcgagtacatttaacaactcat 34116  T
Q  255 aggtaacatcata 267  Q
    |||||||||||||    
T  34117 aggtaacatcata 34129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 312 - 385
Target Start/End: Original strand, 34128 - 34201
Alignment:
Q  312 taacctcgtcatactcttcaacataaagaacgtaagcgtacaccacctcttataagcaacaacaaagtaagagt 385  Q
    |||||||||||||||| |||||||||| |||||||| |||||||||||||||||  || |||||||||||||||    
T  34128 taacctcgtcatactcatcaacataaacaacgtaagagtacaccacctcttatagacaccaacaaagtaagagt 34201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 98 - 150
Target Start/End: Complemental strand, 52905 - 52853
Alignment:
Q  98 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 150  Q
    ||||||| |||||||||| ||||||||||||||||||||||||| ||||||||    
T  52905 tatggcaattacaaccaacaacaccgactcatgcaaatgacatgtcaacaccg 52853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 37281 - 37202
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||| ||||    
T  37281 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcatgtaat 37202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 109601 - 109680
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||| |||||    
T  109601 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcacataat 109680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 224221 - 224142
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||| |||||    
T  224221 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcacataat 224142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 59; Significance: 7e-25; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 192 - 266
Target Start/End: Complemental strand, 25646 - 25572
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcat 266  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||    
T  25646 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcat 25572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 37610 - 37568
Alignment:
Q  193 catgaatagaagacaacttatcaacttaacataaccctcatca 235  Q
    |||||||| |||||||| |||||||||||||||||| ||||||    
T  37610 catgaataaaagacaacgtatcaacttaacataaccatcatca 37568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 58; Significance: 3e-24; HSPs: 2)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 205 - 346
Target Start/End: Original strand, 4134 - 4275
Alignment:
Q  205 acaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataatatcctaacaaccccacattcaacacgataaaag 304  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||| ||| |||  || | || | |||||||||| |||||      
T  4134 acaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcatgtaacatcaaaaaagcctctcattcaacactataaaca 4233  T
Q  305 atcattgtaacctcgtcatactcttcaacataaagaacgtaa 346  Q
    |||||  |||| || ||||| || |||||||||| |||||||    
T  4234 atcatcataacatcatcataatcatcaacataaacaacgtaa 4275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 159 - 212
Target Start/End: Original strand, 4003 - 4056
Alignment:
Q  159 caataataattcttcttaacatccccttaatgctcatgaatagaagacaactta 212  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  4003 caataataattcttcttaacatccccttagtactcatgaatagaagacaactta 4056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 191 - 271
Target Start/End: Complemental strand, 37277 - 37197
Alignment:
Q  191 ctcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| || ||| ||||||||| ||||    
T  37277 ctcatgaatagaagacaacttatcgacttaacataaccatcatcaagtacatttaacaactcctagataacatcatgtaat 37197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0842 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0842
Description:

Target: scaffold0842; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 5242 - 5321
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||||||||  |||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||| |||||    
T  5242 tcatgaataatagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcacataat 5321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 28472 - 28551
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||| |||||| ||||||||| ||||    
T  28472 tcatgaataaaagacaacttatcaacttaacataacgatcatcaagtacatttaacaactcatagataacatcatgtaat 28551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 33937 - 34016
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||| |||||| ||||||||| ||||    
T  33937 tcatgaataaaagacaacttatcaacttaacataacgatcatcaagtacatttaacaactcatagataacatcatgtaat 34016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 3595 - 3516
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||| |||||  |||||||| |||||    
T  3595 tcatgaataaaagacaacttatcaacttaacataacaatcatcaagtacatttaacaactcataaataacatcacataat 3516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 18823 - 18902
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| | ||||||||||||||||||||||||| |||||||||||||||||||| | |||| |||||||| |||||    
T  18823 tcatgaataaatgacaacttatcaacttaacataaccatcatcaagtacatttaacaacttatagataacatcacataat 18902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 8818 - 8739
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||| || ||| ||||||||| ||||    
T  8818 tcatgaataaaagacaacttatcaacttaacataaccatcatcatgtacatttaacaactcgtagataacatcatgtaat 8739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 312 - 385
Target Start/End: Original strand, 208662 - 208735
Alignment:
Q  312 taacctcgtcatactcttcaacataaagaacgtaagcgtacaccacctcttataagcaacaacaaagtaagagt 385  Q
    |||||||||||||||| |||||||||| || |||||  ||||||||||||||||| ||||||||||||||||||    
T  208662 taacctcgtcatactcatcaacataaacaatgtaagattacaccacctcttataaacaacaacaaagtaagagt 208735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1852 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold1852
Description:

Target: scaffold1852; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 192 - 266
Target Start/End: Complemental strand, 899 - 825
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcat 266  Q
    ||||||||| ||||||||||||||||||||||||| | |||||||||||| ||||||| |||||| || ||||||    
T  899 tcatgaataaaagacaacttatcaacttaacataaacatcatcaagtacacttaacaactcatagatatcatcat 825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0410 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 192 - 256
Target Start/End: Original strand, 14844 - 14908
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcatag 256  Q
    ||||||||| ||||||||||||||||||||||||| | |||||||||||| ||||||| ||||||    
T  14844 tcatgaataaaagacaacttatcaacttaacataaacatcatcaagtacacttaacaactcatag 14908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0486 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0486
Description:

Target: scaffold0486; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 8577 - 8656
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| |||||||||||| |||||||||||| | |||||||||||| ||||||| |||||| || |||||| ||||    
T  8577 tcatgaataaaagacaacttattaacttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 8656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 11138 - 11059
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||| ||||||||||||||||||||||||| | |||||| ||||| ||||||| |||||| || |||||| ||||    
T  11138 tcatgaataaaagacaacttatcaacttaacataaacatcatcaggtacacttaacaactcatagatatcatcatgtaat 11059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 98 - 148
Target Start/End: Complemental strand, 1706 - 1656
Alignment:
Q  98 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacac 148  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  1706 tatgacatttacaaccaacaacaccgactcatgcaaatgacatgacaacac 1656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 192 - 266
Target Start/End: Original strand, 10767 - 10841
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcat 266  Q
    ||||||||| || |||||||||||||||||||||||| |||||||||||| ||||||| || ||| || ||||||    
T  10767 tcatgaataaaatacaacttatcaacttaacataaccatcatcaagtacacttaacaactcttagatatcatcat 10841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 192 - 266
Target Start/End: Complemental strand, 15653 - 15579
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcat 266  Q
    ||||||||| ||||||||||||||| ||||||||| | |||||||||||| ||||||| |||||| || ||||||    
T  15653 tcatgaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcat 15579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 214 - 271
Target Start/End: Complemental strand, 21396 - 21339
Alignment:
Q  214 caacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    ||||||||||||||| |||||||||||||||||||| |||||| ||||||||| ||||    
T  21396 caacttaacataaccatcatcaagtacatttaacaactcatagataacatcatgtaat 21339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1584 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold1584
Description:

Target: scaffold1584; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 98 - 150
Target Start/End: Original strand, 229 - 281
Alignment:
Q  98 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 150  Q
    ||||||| |||||||||| ||||||||||||||||||||||||| ||||||||    
T  229 tatggcaattacaaccaacaacaccgactcatgcaaatgacatgtcaacaccg 281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 98 - 150
Target Start/End: Original strand, 38311 - 38363
Alignment:
Q  98 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 150  Q
    |||||||  ||||||||| ||||||||||||||||||||||||||||||||||    
T  38311 tatggcaactacaaccaacaacaccgactcatgcaaatgacatgacaacaccg 38363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 98 - 150
Target Start/End: Complemental strand, 30412 - 30360
Alignment:
Q  98 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 150  Q
    |||||||  ||||||||| ||||||||||||||||||||||||||||||||||    
T  30412 tatggcaactacaaccaacaacaccgactcatgcaaatgacatgacaacaccg 30360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 98 - 150
Target Start/End: Complemental strand, 35813 - 35761
Alignment:
Q  98 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 150  Q
    |||||||  ||||||||| ||||||||||||||||||||||||||||||||||    
T  35813 tatggcaactacaaccaacaacaccgactcatgcaaatgacatgacaacaccg 35761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 98 - 150
Target Start/End: Complemental strand, 174828 - 174776
Alignment:
Q  98 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 150  Q
    |||||||  ||||||||| ||||||||||||||||||||||||||||||||||    
T  174828 tatggcaactacaaccaacaacaccgactcatgcaaatgacatgacaacaccg 174776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 192 - 256
Target Start/End: Original strand, 70755 - 70819
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcatag 256  Q
    ||||||||| |||||||| |||||||||||||||| | |||||||||||| ||||||| ||||||    
T  70755 tcatgaataaaagacaacctatcaacttaacataaacatcatcaagtacacttaacaactcatag 70819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 6399 - 6320
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||| |||| ||||||||||||||| ||||||||| | |||||||||||| ||||||| |||||| || |||||| ||||    
T  6399 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 6320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 11051 - 11130
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||| |||| ||||||||||||||| ||||||||| | |||||||||||| ||||||| |||||| || |||||| ||||    
T  11051 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 11130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 34206 - 34127
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||| |||| ||||||||||||||| ||||||||| | |||||||||||| ||||||| |||||| || |||||| ||||    
T  34206 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 34127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 99 - 150
Target Start/End: Complemental strand, 10373 - 10322
Alignment:
Q  99 atggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 150  Q
    |||||| |||||||||| ||||| ||||||||||||||||||||||||||||    
T  10373 atggcaattacaaccaacaacacagactcatgcaaatgacatgacaacaccg 10322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 99 - 150
Target Start/End: Complemental strand, 17669 - 17618
Alignment:
Q  99 atggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 150  Q
    |||||| |||||||||| ||||| |||||||||||||||||| |||||||||    
T  17669 atggcaattacaaccaacaacacagactcatgcaaatgacataacaacaccg 17618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 60404 - 60325
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||| |||| ||||||||||||||| ||||||||| | |||||||||||| ||||||| |||||| || |||||| ||||    
T  60404 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 60325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 98 - 150
Target Start/End: Complemental strand, 52651 - 52599
Alignment:
Q  98 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 150  Q
    |||||||  ||||||||| |||||||||||||||||| |||||||||||||||    
T  52651 tatggcaactacaaccaacaacaccgactcatgcaaaggacatgacaacaccg 52599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 150
Target Start/End: Complemental strand, 47245 - 47194
Alignment:
Q  98 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 150  Q
    |||||||  ||||||||| ||||||||||||||| || |||||||||||||||    
T  47245 tatggcaactacaaccaacaacaccgactcatgc-aaggacatgacaacaccg 47194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 241
Target Start/End: Complemental strand, 5609 - 5560
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtaca 241  Q
    ||||||||| ||||||||||||||||||||||||| | ||||||||||||    
T  5609 tcatgaataaaagacaacttatcaacttaacataaacatcatcaagtaca 5560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 98 - 150
Target Start/End: Original strand, 2828 - 2881
Alignment:
Q  98 tatggcatttacaa-ccaataacaccgactcatgcaaatgacatgacaacaccg 150  Q
    ||||||| |||||| |||| ||||||||||||||||||||||||||||||||||    
T  2828 tatggcaattacaatccaacaacaccgactcatgcaaatgacatgacaacaccg 2881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 148
Target Start/End: Complemental strand, 658 - 609
Alignment:
Q  99 atggcatttacaaccaataacaccgactcatgcaaatgacatgacaacac 148  Q
    |||||| |||||||||| ||||||||||||||||| ||||||||||||||    
T  658 atggcaattacaaccaacaacaccgactcatgcaactgacatgacaacac 609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 148
Target Start/End: Complemental strand, 31840 - 31791
Alignment:
Q  99 atggcatttacaaccaataacaccgactcatgcaaatgacatgacaacac 148  Q
    |||||| |||||||||| ||||||||||||||||| ||||||||||||||    
T  31840 atggcaattacaaccaacaacaccgactcatgcaactgacatgacaacac 31791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 37; Significance: 0.000000000009; HSPs: 5)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 98 - 150
Target Start/End: Original strand, 25947 - 25999
Alignment:
Q  98 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 150  Q
    ||||||| |||||||||| |||||||||||||||||||  |||||||||||||    
T  25947 tatggcaattacaaccaacaacaccgactcatgcaaattgcatgacaacaccg 25999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 117 - 150
Target Start/End: Original strand, 25993 - 26026
Alignment:
Q  117 aacaccgactcatgcaaatgacatgacaacaccg 150  Q
    ||||||||||||||||||||||||||||||||||    
T  25993 aacaccgactcatgcaaatgacatgacaacaccg 26026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 117 - 150
Target Start/End: Original strand, 27375 - 27408
Alignment:
Q  117 aacaccgactcatgcaaatgacatgacaacaccg 150  Q
    ||||||||||||||||||||||||||||||||||    
T  27375 aacaccgactcatgcaaatgacatgacaacaccg 27408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 149
Target Start/End: Original strand, 26020 - 26052
Alignment:
Q  117 aacaccgactcatgcaaatgacatgacaacacc 149  Q
    |||||||||||||||||||||||||||||||||    
T  26020 aacaccgactcatgcaaatgacatgacaacacc 26052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 149
Target Start/End: Original strand, 27402 - 27434
Alignment:
Q  117 aacaccgactcatgcaaatgacatgacaacacc 149  Q
    |||||||||||||||||||||||||||||||||    
T  27402 aacaccgactcatgcaaatgacatgacaacacc 27434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 192 - 256
Target Start/End: Original strand, 11777 - 11841
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcatag 256  Q
    ||||| ||| |||||||| |||||||||||||||| | |||||||||||| ||||||| ||||||    
T  11777 tcatgtataaaagacaacatatcaacttaacataagcatcatcaagtacacttaacaactcatag 11841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 192 - 255
Target Start/End: Original strand, 5826 - 5888
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcata 255  Q
    ||||||||| ||||||||| ||||||||||||||| | |||||||||||| ||||||| |||||    
T  5826 tcatgaataaaagacaact-atcaacttaacataaacatcatcaagtacacttaacaactcata 5888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 98 - 149
Target Start/End: Complemental strand, 5397 - 5346
Alignment:
Q  98 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacacc 149  Q
    ||||||| ||||| |||| |||||||||||||||||||||||| ||||||||    
T  5397 tatggcaattacatccaacaacaccgactcatgcaaatgacataacaacacc 5346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 68634 - 68555
Alignment:
Q  192 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaattcataggtaacatcatataat 271  Q
    |||| |||| ||||||||||||||| ||||||||| |  ||||||||||| ||||||| |||||| || |||||| ||||    
T  68634 tcattaataaaagacaacttatcaatttaacataaacaccatcaagtacacttaacaactcatagatatcatcatgtaat 68555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 340 - 385
Target Start/End: Original strand, 48112 - 48158
Alignment:
Q  340 aacgtaagcgtacaccacctcttat-aagcaacaacaaagtaagagt 385  Q
    |||||||| |||||||||||||||| || ||||||||||||||||||    
T  48112 aacgtaagagtacaccacctcttataaaacaacaacaaagtaagagt 48158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 150
Target Start/End: Original strand, 9912 - 9964
Alignment:
Q  98 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 150  Q
    ||||||| ||||| |||| || ||||||||||||| ||||||| |||||||||    
T  9912 tatggcaattacatccaacaataccgactcatgcatatgacataacaacaccg 9964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University