View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16859_low_2 (Length: 340)

Name: NF16859_low_2
Description: NF16859
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16859_low_2
NF16859_low_2
[»] chr2 (9 HSPs)
chr2 (75-189)||(3205831-3205945)
chr2 (9-76)||(9293576-9293643)
chr2 (9-76)||(23268062-23268129)
chr2 (9-75)||(35160756-35160822)
chr2 (9-74)||(21936081-21936146)
chr2 (9-73)||(10661888-10661952)
chr2 (10-76)||(13354844-13354910)
chr2 (9-75)||(7475508-7475574)
chr2 (9-74)||(33380207-33380272)
[»] scaffold0096 (1 HSPs)
scaffold0096 (9-76)||(41009-41076)
[»] chr8 (17 HSPs)
chr8 (9-76)||(32064743-32064810)
chr8 (9-74)||(34665382-34665447)
chr8 (9-76)||(17841850-17841917)
chr8 (9-76)||(40780129-40780196)
chr8 (9-76)||(42755042-42755109)
chr8 (10-76)||(15187558-15187624)
chr8 (9-67)||(38016978-38017036)
chr8 (9-74)||(20091801-20091866)
chr8 (9-74)||(24211553-24211618)
chr8 (9-74)||(32393858-32393923)
chr8 (9-73)||(14128865-14128929)
chr8 (9-76)||(1645965-1646032)
chr8 (9-76)||(26042116-26042183)
chr8 (9-76)||(37986055-37986122)
chr8 (9-76)||(39772801-39772868)
chr8 (9-74)||(35353041-35353106)
chr8 (9-75)||(41819778-41819844)
[»] chr7 (10 HSPs)
chr7 (9-76)||(45637710-45637777)
chr7 (9-75)||(15577850-15577916)
chr7 (9-74)||(4974735-4974800)
chr7 (9-74)||(42611811-42611876)
chr7 (9-76)||(15329271-15329338)
chr7 (9-74)||(48880927-48880992)
chr7 (11-74)||(24394972-24395035)
chr7 (9-75)||(35444557-35444623)
chr7 (9-74)||(3961979-3962044)
chr7 (21-74)||(20010109-20010162)
[»] chr6 (12 HSPs)
chr6 (9-76)||(18365573-18365640)
chr6 (9-76)||(18370837-18370904)
chr6 (9-75)||(33695327-33695393)
chr6 (9-75)||(33696695-33696761)
chr6 (9-76)||(6127273-6127340)
chr6 (9-76)||(23291084-23291151)
chr6 (9-74)||(17176021-17176086)
chr6 (9-77)||(28675145-28675213)
chr6 (9-74)||(17705465-17705530)
chr6 (10-75)||(18889698-18889762)
chr6 (9-76)||(2309423-2309490)
chr6 (9-74)||(6031741-6031806)
[»] chr4 (16 HSPs)
chr4 (9-76)||(10442789-10442856)
chr4 (9-75)||(31078819-31078885)
chr4 (9-74)||(22199261-22199326)
chr4 (9-74)||(49387888-49387953)
chr4 (9-76)||(21802322-21802389)
chr4 (9-76)||(24128237-24128304)
chr4 (11-74)||(36072947-36073010)
chr4 (9-76)||(44893424-44893491)
chr4 (9-76)||(47290064-47290131)
chr4 (9-75)||(33530688-33530754)
chr4 (9-74)||(2624837-2624902)
chr4 (11-75)||(4751445-4751509)
chr4 (9-73)||(7745112-7745176)
chr4 (9-76)||(23964465-23964532)
chr4 (9-76)||(36073348-36073415)
chr4 (9-77)||(50156578-50156646)
[»] chr1 (12 HSPs)
chr1 (9-74)||(40214988-40215053)
chr1 (9-76)||(16045798-16045865)
chr1 (9-74)||(9910293-9910358)
chr1 (9-74)||(44094698-44094763)
chr1 (9-76)||(3559615-3559682)
chr1 (9-76)||(18404440-18404507)
chr1 (9-76)||(19015402-19015469)
chr1 (9-76)||(25463674-25463741)
chr1 (9-75)||(41876442-41876508)
chr1 (9-74)||(36966708-36966773)
chr1 (9-74)||(37821834-37821899)
chr1 (9-76)||(25973412-25973478)
[»] scaffold0471 (1 HSPs)
scaffold0471 (9-76)||(12840-12907)
[»] chr5 (13 HSPs)
chr5 (9-76)||(2477634-2477701)
chr5 (9-76)||(6043511-6043578)
chr5 (9-74)||(11361131-11361196)
chr5 (11-75)||(3362777-3362841)
chr5 (9-65)||(8145384-8145440)
chr5 (11-75)||(38899728-38899792)
chr5 (9-76)||(4892200-4892267)
chr5 (9-76)||(14138666-14138733)
chr5 (9-74)||(25398238-25398303)
chr5 (9-74)||(33584329-33584394)
chr5 (9-80)||(37321793-37321865)
chr5 (11-74)||(12850801-12850864)
chr5 (9-74)||(3522006-3522071)
[»] chr3 (15 HSPs)
chr3 (9-76)||(2754715-2754782)
chr3 (9-76)||(3574527-3574594)
chr3 (10-76)||(11347266-11347332)
chr3 (9-74)||(6041884-6041949)
chr3 (9-74)||(37217053-37217118)
chr3 (9-77)||(3137414-3137482)
chr3 (9-76)||(33113791-33113858)
chr3 (9-84)||(48160895-48160970)
chr3 (9-74)||(3456064-3456129)
chr3 (9-74)||(30385011-30385076)
chr3 (9-76)||(34482910-34482977)
chr3 (9-76)||(37522051-37522118)
chr3 (43-76)||(47402630-47402663)
chr3 (9-74)||(19650900-19650965)
chr3 (43-75)||(42297352-42297384)
[»] scaffold0178 (1 HSPs)
scaffold0178 (9-74)||(11621-11686)
[»] scaffold0085 (1 HSPs)
scaffold0085 (9-74)||(47850-47915)
[»] scaffold0665 (1 HSPs)
scaffold0665 (9-73)||(3069-3133)
[»] scaffold0204 (1 HSPs)
scaffold0204 (9-76)||(4394-4461)
[»] scaffold0228 (3 HSPs)
scaffold0228 (9-63)||(8413-8467)
scaffold0228 (9-63)||(15995-16049)
scaffold0228 (9-63)||(25947-26001)


Alignment Details
Target: chr2 (Bit Score: 115; Significance: 2e-58; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 75 - 189
Target Start/End: Original strand, 3205831 - 3205945
Alignment:
Q  75 ttgtttgaaagcttaacacaaaaacactatcacaacaaattaataatttaattgaaccaaataaccagatctaggagggcagcaagttaaatcacttgca 174  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3205831 ttgtttgaaagcttaacacaaaaacactatcacaacaaattaataatttaattgaaccaaataaccagatctaggagggcagcaagttaaatcacttgca 3205930  T
Q  175 aaagaaaaaggaaca 189  Q
    |||||||||||||||    
T  3205931 aaagaaaaaggaaca 3205945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 9293576 - 9293643
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctctt 76  Q
    |||||||||||||||||||||||||||       |||||||||||||||||||||||| |||||||||    
T  9293576 gattattctgccatgtcattcttgaaaatttcttgataaaatctttcttgatatatagcattgctctt 9293643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 23268062 - 23268129
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctctt 76  Q
    |||||||||||||||||||||||||||       || ||||||||||||||||||||| |||||||||    
T  23268062 gattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctctt 23268129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 35160822 - 35160756
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctct 75  Q
    ||||||||||||||||||||||| |||       |||||||||||||||||||||||| ||||||||    
T  35160822 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctct 35160756  T

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Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 21936146 - 21936081
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctc 74  Q
    |||||||||||||| ||||||||||||       |||||||||||||||||||||||| |||||||    
T  21936146 gattattctgccatatcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 21936081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 10661952 - 10661888
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgct 73  Q
    ||||||||||||||||||||||| |||       |||||||||||||||||||||||| ||||||    
T  10661952 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgct 10661888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 10 - 76
Target Start/End: Complemental strand, 13354910 - 13354844
Alignment:
Q  10 attattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctctt 76  Q
    ||||||||||||| ||||||||||||       |||||||||||||||||||||||  |||||||||    
T  13354910 attattctgccatatcattcttgaaattttcttgataaaatctttcttgatatataacattgctctt 13354844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 7475508 - 7475574
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctct 75  Q
    |||||||||  ||||||||||||||||       || ||||||||||||||||||||| ||||||||    
T  7475508 gattattctatcatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctct 7475574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 33380272 - 33380207
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctc 74  Q
    |||||||| |||||||||||||| |||       || ||||||||||||||||||||| |||||||    
T  33380272 gattattcagccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcattgctc 33380207  T

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Target: scaffold0096 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 41076 - 41009
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctctt 76  Q
    |||||||||||||||||||||||||||       |||||||||||||||||||||||| |||||||||    
T  41076 gattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatatatagcattgctctt 41009  T

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Target: chr8 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 32064810 - 32064743
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctctt 76  Q
    |||||||||||||||||||||||||||       |||||||||||||||||||||||| |||||||||    
T  32064810 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctctt 32064743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 34665447 - 34665382
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctc 74  Q
    |||||||||||||||||||||||||||       |||||||||||||||||||||||| |||||||    
T  34665447 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 34665382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 17841850 - 17841917
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctctt 76  Q
    |||||||||||||||||||||||||||       || ||||||||||||||||||||| |||||||||    
T  17841850 gattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctctt 17841917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 40780129 - 40780196
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctctt 76  Q
    |||||||||||||||||||||||||||       || ||||||||||||||||||||| |||||||||    
T  40780129 gattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctctt 40780196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 42755042 - 42755109
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctctt 76  Q
    |||||||||||||||||||||||||||       |||||||||||||||||||||||  |||||||||    
T  42755042 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatatcattgctctt 42755109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 76
Target Start/End: Complemental strand, 15187624 - 15187558
Alignment:
Q  10 attattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctctt 76  Q
    ||||||||||||| ||||||||||||       |||||||||||||||||||||||| |||||||||    
T  15187624 attattctgccatatcattcttgaaattttcttgataaaatctttcttgatatatagcattgctctt 15187558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 38017036 - 38016978
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatataga 67  Q
    |||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  38017036 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataga 38016978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 20091801 - 20091866
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctc 74  Q
    |||||||||||||||||||||||||||       |||||||| ||||||||||||||| |||||||    
T  20091801 gattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatatatagcattgctc 20091866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 24211553 - 24211618
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctc 74  Q
    ||||||||||||||| |||||||||||       |||||||||||||||||||||||| |||||||    
T  24211553 gattattctgccatgccattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 24211618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 32393923 - 32393858
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctc 74  Q
    ||||||||||||||||||||||| |||       |||||||||||||||||||||||| |||||||    
T  32393923 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 32393858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 14128929 - 14128865
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgct 73  Q
    ||||||||||||||||||||||| |||       |||||||||||||||||||||||| ||||||    
T  14128929 gattattctgccatgtcattcttaaaattttattgataaaatctttcttgatatatagcattgct 14128865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 1645965 - 1646032
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctctt 76  Q
    ||||||||||||||||| ||||| |||       |||||||||||||||||||||||| |||||||||    
T  1645965 gattattctgccatgtctttcttaaaattttcttgataaaatctttcttgatatatagcattgctctt 1646032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 26042116 - 26042183
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctctt 76  Q
    |||||||||| ||||||||||||||||       ||||||||||||||| |||||||| |||||||||    
T  26042116 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttaatatatagcattgctctt 26042183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 37986055 - 37986122
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctctt 76  Q
    ||||||||||||||||||||||| |||       |||||||||||||||||||||||| ||| |||||    
T  37986055 gattattctgccatgtcattcttaaaatttttttgataaaatctttcttgatatatagcattactctt 37986122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 39772801 - 39772868
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctctt 76  Q
    |||||||||||||||||||||||||||       |||||||| ||||||||||||||  |||||||||    
T  39772801 gattattctgccatgtcattcttgaaatttttttgataaaatatttcttgatatataacattgctctt 39772868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 35353106 - 35353041
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctc 74  Q
    ||||||||||||||||||||||| |||       || ||||||||||||||||||||| |||||||    
T  35353106 gattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcattgctc 35353041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 41819778 - 41819844
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctct 75  Q
    |||||||||||||| |||||||| |||       |||||||||||||||||||||||  ||||||||    
T  41819778 gattattctgccatatcattcttaaaacattcttgataaaatctttcttgatatataacattgctct 41819844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 45637777 - 45637710
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctctt 76  Q
    |||||||||||||||||||||||||||       |||||||||||||||||||||||| |||||||||    
T  45637777 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctctt 45637710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 15577850 - 15577916
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctct 75  Q
    |||||||||||||||||||||||||||       |||||||||||||||||||||||| ||||||||    
T  15577850 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctct 15577916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 4974735 - 4974800
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctc 74  Q
    |||||||||||||||||||||||||||       |||||||||||||||||||||||| |||||||    
T  4974735 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 4974800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 42611876 - 42611811
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctc 74  Q
    |||||||||||||||||||||||||||       |||||||||||||||||||||||| |||||||    
T  42611876 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 42611811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 15329338 - 15329271
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctctt 76  Q
    |||||||||| ||||||||||||||||       |||||||||||||||||||||||| |||||||||    
T  15329338 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctctt 15329271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 48880927 - 48880992
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctc 74  Q
    |||||||||| ||||||||||||||||       |||||||||||||||||||||||| |||||||    
T  48880927 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 48880992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 24395035 - 24394972
Alignment:
Q  11 ttattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctc 74  Q
    ||||||||||||||||||||| |||       |||||||||||||||||||||||| |||||||    
T  24395035 ttattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 24394972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 35444623 - 35444557
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctct 75  Q
    |||||||||||||||||||||||||||       || |||||||||||| |||||||| ||||||||    
T  35444623 gattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttaatatatagcattgctct 35444557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 3962044 - 3961979
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctc 74  Q
    |||||||||| |||||||||||| |||       |||||||||||||||||||||||| |||||||    
T  3962044 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 3961979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 20010109 - 20010162
Alignment:
Q  21 atgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctc 74  Q
    |||||||||||||||       |||||||||||||||||||||||| |||||||    
T  20010109 atgtcattcttgaaatttttttgataaaatctttcttgatatatagcattgctc 20010162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 18365573 - 18365640
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctctt 76  Q
    |||||||||||||||||||||||||||       |||||||||||||||||||||||| |||||||||    
T  18365573 gattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatatatagcattgctctt 18365640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 18370837 - 18370904
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctctt 76  Q
    |||||||||||||||||||||||||||       |||||||||||||||||||||||| |||||||||    
T  18370837 gattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatatatagcattgctctt 18370904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 33695327 - 33695393
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctct 75  Q
    |||||||||||||||||||||||||||       |||||||||||||||||||||||| ||||||||    
T  33695327 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctct 33695393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 33696761 - 33696695
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctct 75  Q
    |||||||||||||||||||||||||||       |||||||||||||||||||||||| ||||||||    
T  33696761 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctct 33696695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 6127340 - 6127273
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctctt 76  Q
    ||||||||||||||||||||||| |||       |||||||||||||||||||||||| |||||||||    
T  6127340 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctt 6127273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 23291084 - 23291151
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctctt 76  Q
    ||||||||||||||||||||||| |||       |||||||||||||||||||||||| |||||||||    
T  23291084 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctt 23291151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 17176021 - 17176086
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctc 74  Q
    |||||||||| ||||||||||||||||       |||||||||||||||||||||||| |||||||    
T  17176021 gattattctgtcatgtcattcttgaaattttattgataaaatctttcttgatatatagcattgctc 17176086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 28675213 - 28675145
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctcttg 77  Q
    |||||||| | ||||||||||||||||       |||||||||||||||||||||||| ||||||||||    
T  28675213 gattattccgacatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctcttg 28675145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 17705465 - 17705530
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctc 74  Q
    |||||||||| |||||||||||| |||       |||||||||||||||||||||||| |||||||    
T  17705465 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 17705530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 75
Target Start/End: Original strand, 18889698 - 18889762
Alignment:
Q  10 attattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctct 75  Q
    ||||||||||||||||||||||||||       ||| |||||||||||||||||||| ||||||||    
T  18889698 attattctgccatgtcattcttgaaattttcttgat-aaatctttcttgatatatagcattgctct 18889762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 2309423 - 2309490
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctctt 76  Q
    ||||||||||||||| ||||||| |||       |||||||||||||||||||||||  |||||||||    
T  2309423 gattattctgccatgccattcttaaaaaaattttgataaaatctttcttgatatataacattgctctt 2309490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 6031741 - 6031806
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctc 74  Q
    |||||||||| |||||||||||| |||       ||| |||||||||||||||||||| |||||||    
T  6031741 gattattctgtcatgtcattcttaaaattttattgatgaaatctttcttgatatatagcattgctc 6031806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 10442789 - 10442856
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctctt 76  Q
    |||||||||||||||||||||||||||       |||||||||||||||||||||||| |||||||||    
T  10442789 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctctt 10442856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 31078819 - 31078885
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctct 75  Q
    |||||||||||||||||||||||||||       |||||||||||||||||||||||| ||||||||    
T  31078819 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctct 31078885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 22199326 - 22199261
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctc 74  Q
    |||||||||||||||||||||||||||       |||||||||||||||||||||||| |||||||    
T  22199326 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 22199261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 49387888 - 49387953
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctc 74  Q
    |||||||||||||||||||||||||||       |||||||||||||||||||||||| |||||||    
T  49387888 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 49387953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 21802322 - 21802389
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctctt 76  Q
    |||||||||||||||||||||||||||       |||||||| ||||||||||||||| |||||||||    
T  21802322 gattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatatatagcattgctctt 21802389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 24128304 - 24128237
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctctt 76  Q
    |||||||||||||||||||||||||||       || ||||||||||||||||||||| |||||||||    
T  24128304 gattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctctt 24128237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 36073010 - 36072947
Alignment:
Q  11 ttattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctc 74  Q
    |||||||||||||||||||||||||       |||||||||||||||||||||||| |||||||    
T  36073010 ttattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 36072947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 44893491 - 44893424
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctctt 76  Q
    |||||||||||||||||||||||||||       || ||||||||||||||||||||| |||||||||    
T  44893491 gattattctgccatgtcattcttgaaatttttttgaaaaaatctttcttgatatatagcattgctctt 44893424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 47290131 - 47290064
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctctt 76  Q
    |||||||||||||||||||||||||||       || ||||||||||||||||||||| |||||||||    
T  47290131 gattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctctt 47290064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 33530688 - 33530754
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctct 75  Q
    ||||||||||||||||||||||||||        |||||||||||||||||||||||| ||||||||    
T  33530688 gattattctgccatgtcattcttgaatttttcttgataaaatctttcttgatatatagcattgctct 33530754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 2624902 - 2624837
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctc 74  Q
    |||||||||||||| ||||||||||||       |||||||||||||||||||||||| |||||||    
T  2624902 gattattctgccatttcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 2624837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 4751509 - 4751445
Alignment:
Q  11 ttattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctct 75  Q
    |||||||||||||||||||||| ||       |||||||||||||||||||||||| ||||||||    
T  4751509 ttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 4751445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 7745112 - 7745176
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgct 73  Q
    ||||||||||||||||||||||| |||       |||||||||||||||||||||||| ||||||    
T  7745112 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgct 7745176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 23964465 - 23964532
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctctt 76  Q
    ||||||||||||||||||||||| |||       |||||||||||||||||||||||  |||||||||    
T  23964465 gattattctgccatgtcattcttaaaatttttttgataaaatctttcttgatatataacattgctctt 23964532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 36073415 - 36073348
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctctt 76  Q
    |||||||||||||||||||||||||||       || ||||||||||||||||||||| ||| |||||    
T  36073415 gattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattcctctt 36073348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 50156578 - 50156646
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctcttg 77  Q
    ||||||||||||||||||||||| |||       || |||||||||||| |||||||| ||||||||||    
T  50156578 gattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttaatatatagcattgctcttg 50156646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 40215053 - 40214988
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctc 74  Q
    |||||||||||||||||||||||||||       |||||||||||||||||||||||| |||||||    
T  40215053 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 40214988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 16045798 - 16045865
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctctt 76  Q
    |||||||||||||||||||||||||||       |||||||||||||||||||||||| ||| |||||    
T  16045798 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattactctt 16045865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 9910293 - 9910358
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctc 74  Q
    |||||||||||||||||||||||||||       || ||||||||||||||||||||| |||||||    
T  9910293 gattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctc 9910358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 44094763 - 44094698
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctc 74  Q
    |||||||||||||||||||||||||||       |||||||| ||||||||||||||| |||||||    
T  44094763 gattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatatatagcattgctc 44094698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 3559682 - 3559615
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctctt 76  Q
    ||||||||||||||||||||||| |||       |||||||||||||||||||||||| |||| ||||    
T  3559682 gattattctgccatgtcattcttaaaatttttttgataaaatctttcttgatatatagcattgttctt 3559615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 18404507 - 18404440
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctctt 76  Q
    ||||||||| ||||||||||||| |||       |||||||||||||||||||||||| |||||||||    
T  18404507 gattattctaccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctt 18404440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 19015469 - 19015402
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctctt 76  Q
    |||||||||||||| ||||||||||||       || ||||||||||||||||||||| |||||||||    
T  19015469 gattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctctt 19015402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 25463741 - 25463674
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctctt 76  Q
    ||||||||||||||||||||||| |||        ||||||||||||||||||||||| |||||||||    
T  25463741 gattattctgccatgtcattcttaaaattttcttcataaaatctttcttgatatatagcattgctctt 25463674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 41876442 - 41876508
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctct 75  Q
    ||||||||||||||||||||||| |||       || ||||||||||||||||||||| ||||||||    
T  41876442 gattattctgccatgtcattcttaaaatttttttgaaaaaatctttcttgatatatagcattgctct 41876508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 36966708 - 36966773
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctc 74  Q
    |||||||||||||| ||||||||||||       || ||||||||||||||||||||| |||||||    
T  36966708 gattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctc 36966773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 37821834 - 37821899
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctc 74  Q
    |||||||||||||| ||||||||||||       || ||||||||||||||||||||| |||||||    
T  37821834 gattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctc 37821899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 25973478 - 25973412
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctctt 76  Q
    |||||||||||| ||||||||||||||       |||||||||||||||||||||||  |||||||||    
T  25973478 gattattctgcc-tgtcattcttgaaattttcatgataaaatctttcttgatatataacattgctctt 25973412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 12907 - 12840
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctctt 76  Q
    |||||||||||||||||||||||||||       || ||||||||||||||||||||| |||||||||    
T  12907 gattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctctt 12840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 2477701 - 2477634
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctctt 76  Q
    ||||||||||||||||||||||| |||       |||||||||||||||||||||||| |||||||||    
T  2477701 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctt 2477634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 6043511 - 6043578
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctctt 76  Q
    ||||||||| |||||||||||||||||       |||||||||||||||||||||||| |||||||||    
T  6043511 gattattcttccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctctt 6043578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 11361131 - 11361196
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctc 74  Q
    ||||||||||||||||||||||| |||       |||||||||||||||||||||||| |||||||    
T  11361131 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 11361196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 3362841 - 3362777
Alignment:
Q  11 ttattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctct 75  Q
    |||||||||||||||||||||| ||       |||||||||||||||||||||||| ||||||||    
T  3362841 ttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 3362777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 8145440 - 8145384
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatata 65  Q
    |||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  8145440 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatata 8145384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 38899728 - 38899792
Alignment:
Q  11 ttattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctct 75  Q
    |||||||||||||||||||||| ||       |||||||||||||||||||||||| ||||||||    
T  38899728 ttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 38899792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 4892267 - 4892200
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctctt 76  Q
    ||||||||||||||||||||||| |||       || ||||||||||||||||||||| |||||||||    
T  4892267 gattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcattgctctt 4892200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 14138733 - 14138666
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctctt 76  Q
    |||||||||||||||| ||||||||||       |||||||||||||||||||||||  |||||||||    
T  14138733 gattattctgccatgtaattcttgaaattttcttgataaaatctttcttgatatataacattgctctt 14138666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 25398303 - 25398238
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctc 74  Q
    ||||||||||||||||||||||| |||       || ||||||||||||||||||||| |||||||    
T  25398303 gattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcattgctc 25398238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 33584329 - 33584394
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctc 74  Q
    ||||||||||||||||||||||| |||       || ||||||||||||||||||||| |||||||    
T  33584329 gattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcattgctc 33584394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 37321793 - 37321865
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttctt-gatatatagaattgctcttgttt 80  Q
    ||||||||||||||||||||||| |||       ||||||||||||||| ||||||||| ||||||| |||||    
T  37321793 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttagatatatagcattgctcctgttt 37321865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 12850864 - 12850801
Alignment:
Q  11 ttattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctc 74  Q
    |||||||||||||||||| ||| ||       |||||||||||||||||||||||| |||||||    
T  12850864 ttattctgccatgtcatttttggaattttcttgataaaatctttcttgatatatagcattgctc 12850801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 3522006 - 3522071
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctc 74  Q
    |||||||||||||||||||| ||||||       || ||||||||||||||||||||  |||||||    
T  3522006 gattattctgccatgtcatttttgaaattttcttgaaaaaatctttcttgatatataacattgctc 3522071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 2754782 - 2754715
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctctt 76  Q
    ||||||||||||||||||||||| |||       |||||||||||||||||||||||| |||||||||    
T  2754782 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctt 2754715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 3574527 - 3574594
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctctt 76  Q
    ||||||||||||||||||||||| |||       |||||||||||||||||||||||| |||||||||    
T  3574527 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctt 3574594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 76
Target Start/End: Complemental strand, 11347332 - 11347266
Alignment:
Q  10 attattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctctt 76  Q
    |||||||||||||||||||||| |||       |||||||||||||||||||||||| |||||||||    
T  11347332 attattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctt 11347266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 6041949 - 6041884
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctc 74  Q
    |||||||||| ||||||||||||||||       |||||||||||||||||||||||| |||||||    
T  6041949 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 6041884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 37217053 - 37217118
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctc 74  Q
    ||||||||||||||||||||||| |||       |||||||||||||||||||||||| |||||||    
T  37217053 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 37217118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 3137414 - 3137482
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctcttg 77  Q
    ||||||| |||||||||||||||||||       || ||||||||||||||||||||| ||||||||||    
T  3137414 gattattttgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctcttg 3137482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 33113858 - 33113791
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctctt 76  Q
    |||||||||||||||| ||||||||||        ||||||||||||||||||||||| |||||||||    
T  33113858 gattattctgccatgtaattcttgaaattttcttaataaaatctttcttgatatatagcattgctctt 33113791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 84
Target Start/End: Complemental strand, 48160970 - 48160895
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctcttgtttgaaa 84  Q
    |||||||||||||| |||||||| |||       |||||||||||||||||||||||| ||||||| | |||||||    
T  48160970 gattattctgccatatcattcttaaaattttcttgataaaatctttcttgatatatagcattgctcatttttgaaa 48160895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 3456129 - 3456064
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctc 74  Q
    |||||||||||||| |||||||| |||       |||||||||||||||||||||||| |||||||    
T  3456129 gattattctgccatatcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 3456064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 30385076 - 30385011
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctc 74  Q
    |||||||||||||||||||| ||||||       ||||||||||||||||||| |||| |||||||    
T  30385076 gattattctgccatgtcatttttgaaattttcttgataaaatctttcttgataaatagcattgctc 30385011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 34482910 - 34482977
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctctt 76  Q
    ||||||||| |||| ||||||||||||       || ||||||||||||||||||||| |||||||||    
T  34482910 gattattctaccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctctt 34482977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 37522118 - 37522051
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctctt 76  Q
    |||||||||| |||||||||||| |||       || ||||||||||||||||||||| |||||||||    
T  37522118 gattattctgtcatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagtattgctctt 37522051  T

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Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 76
Target Start/End: Original strand, 47402630 - 47402663
Alignment:
Q  43 gataaaatctttcttgatatatagaattgctctt 76  Q
    |||||||||||||||||||||||| |||||||||    
T  47402630 gataaaatctttcttgatatatagcattgctctt 47402663  T

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Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 19650900 - 19650965
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctc 74  Q
    ||||||||||||||||||||||| |||       ||||||||||||||| |||||||  |||||||    
T  19650900 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttaatatataacattgctc 19650965  T

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Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 75
Target Start/End: Complemental strand, 42297384 - 42297352
Alignment:
Q  43 gataaaatctttcttgatatatagaattgctct 75  Q
    |||||||||||||||||||||||| ||||||||    
T  42297384 gataaaatctttcttgatatatagcattgctct 42297352  T

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Target: scaffold0178 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 11686 - 11621
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctc 74  Q
    |||||||||| ||||||||||||||||       |||||||||||||||||||||||| |||||||    
T  11686 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 11621  T

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Target: scaffold0085 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 47915 - 47850
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctc 74  Q
    |||||||||||||||||||||||||||       ||||||||||||||||||| |||| |||||||    
T  47915 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgataaatagcattgctc 47850  T

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Target: scaffold0665 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 3133 - 3069
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgct 73  Q
    ||||||||||||||||||||||| |||       |||||||||||||||||||||||| ||||||    
T  3133 gattattctgccatgtcattcttaaaattttattgataaaatctttcttgatatatagcattgct 3069  T

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Target: scaffold0204 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 4461 - 4394
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatatatagaattgctctt 76  Q
    ||||||||||||||||||||||| |||       || ||||||||||||||||||||| |||||||||    
T  4461 gattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcattgctctt 4394  T

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Target: scaffold0228 (Bit Score: 34; Significance: 0.0000000005; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 8467 - 8413
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatata 63  Q
    |||||||||||||||||||||||||||       |||||||||||||||||||||    
T  8467 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatata 8413  T

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Target: scaffold0228; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 16049 - 15995
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatata 63  Q
    |||||||||||||||||||||||||||       |||||||||||||||||||||    
T  16049 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatata 15995  T

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Target: scaffold0228; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 26001 - 25947
Alignment:
Q  9 gattattctgccatgtcattcttgaaannnnnnngataaaatctttcttgatata 63  Q
    |||||||||||||||||||||||||||       |||||||||||||||||||||    
T  26001 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatata 25947  T

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