View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16865_low_7 (Length: 236)

Name: NF16865_low_7
Description: NF16865
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16865_low_7
NF16865_low_7
[»] scaffold0456 (1 HSPs)
scaffold0456 (1-236)||(10286-10521)
[»] chr8 (55 HSPs)
chr8 (1-236)||(31971280-31971516)
chr8 (1-236)||(16199506-16199742)
chr8 (1-236)||(45130858-45131094)
chr8 (1-196)||(21395883-21396078)
chr8 (1-196)||(21790376-21790571)
chr8 (1-191)||(21389358-21389548)
chr8 (1-178)||(21778697-21778874)
chr8 (1-236)||(21918860-21919098)
chr8 (1-236)||(20536231-20536469)
chr8 (1-236)||(18879097-18879329)
chr8 (1-232)||(22626759-22626992)
chr8 (1-232)||(18818273-18818507)
chr8 (1-232)||(21923792-21924026)
chr8 (1-232)||(28648908-28649142)
chr8 (5-232)||(23648580-23648810)
chr8 (1-206)||(7372801-7373001)
chr8 (1-205)||(23406402-23406611)
chr8 (1-231)||(6759281-6759512)
chr8 (114-232)||(25363004-25363123)
chr8 (1-231)||(22875088-22875321)
chr8 (1-231)||(16092206-16092440)
chr8 (1-74)||(17140939-17141014)
chr8 (1-74)||(5866297-5866372)
chr8 (1-94)||(6520391-6520486)
chr8 (1-73)||(21491018-21491092)
chr8 (2-51)||(19154935-19154984)
chr8 (1-95)||(20498585-20498681)
chr8 (1-95)||(21285620-21285716)
chr8 (1-50)||(23760893-23760942)
chr8 (1-50)||(38855300-38855349)
chr8 (5-74)||(13508108-13508179)
chr8 (1-49)||(24353043-24353091)
chr8 (1-49)||(37116370-37116418)
chr8 (1-141)||(16413316-16413458)
chr8 (1-50)||(983455-983504)
chr8 (1-49)||(17267044-17267092)
chr8 (5-74)||(17612133-17612204)
chr8 (1-127)||(14409459-14409586)
chr8 (3-49)||(17439557-17439603)
chr8 (1-50)||(26355747-26355796)
chr8 (5-74)||(13597640-13597711)
chr8 (1-76)||(20046261-20046337)
chr8 (1-127)||(1484422-1484549)
chr8 (1-127)||(5853307-5853434)
chr8 (1-127)||(20403247-20403374)
chr8 (1-127)||(22001773-22001900)
chr8 (1-127)||(4483301-4483427)
chr8 (1-127)||(41598208-41598335)
chr8 (4-76)||(15203297-15203370)
chr8 (1-74)||(21249407-21249483)
chr8 (1-74)||(21255245-21255321)
chr8 (1-46)||(21673727-21673772)
chr8 (1-76)||(15070578-15070654)
chr8 (1-49)||(22525581-22525628)
chr8 (1-76)||(45290761-45290837)
[»] scaffold0113 (1 HSPs)
scaffold0113 (1-236)||(32090-32325)
[»] scaffold0598 (1 HSPs)
scaffold0598 (1-236)||(912-1147)
[»] chr2 (57 HSPs)
chr2 (1-236)||(20309131-20309366)
chr2 (1-236)||(37976-38212)
chr2 (1-232)||(23285888-23286118)
chr2 (1-236)||(23654246-23654484)
chr2 (1-224)||(298686-298913)
chr2 (1-210)||(22731120-22731332)
chr2 (1-232)||(22738044-22738277)
chr2 (1-205)||(23060536-23060742)
chr2 (1-232)||(23076465-23076699)
chr2 (1-232)||(22337138-22337372)
chr2 (1-232)||(23660046-23660279)
chr2 (128-236)||(27753728-27753836)
chr2 (1-95)||(23103399-23103493)
chr2 (1-190)||(23708524-23708717)
chr2 (64-182)||(40622123-40622244)
chr2 (8-95)||(7735-7824)
chr2 (1-127)||(22105432-22105560)
chr2 (1-51)||(23207300-23207350)
chr2 (5-94)||(7679612-7679702)
chr2 (5-74)||(19671857-19671928)
chr2 (1-50)||(28405999-28406048)
chr2 (1-49)||(20520243-20520291)
chr2 (1-127)||(21155075-21155202)
chr2 (2-49)||(23004772-23004819)
chr2 (1-127)||(26505399-26505526)
chr2 (1-127)||(26507877-26508004)
chr2 (1-51)||(22413186-22413236)
chr2 (3-74)||(23071972-23072045)
chr2 (8-50)||(25175880-25175922)
chr2 (1-141)||(32214921-32215063)
chr2 (1-49)||(23287386-23287433)
chr2 (1-49)||(25108910-25108958)
chr2 (1-127)||(18808963-18809090)
chr2 (1-127)||(23130882-23131009)
chr2 (1-127)||(23133349-23133476)
chr2 (1-127)||(23135610-23135737)
chr2 (1-127)||(23709547-23709674)
chr2 (1-127)||(23712028-23712155)
chr2 (1-127)||(24367794-24367921)
chr2 (1-48)||(26392405-26392451)
chr2 (1-127)||(34402537-34402664)
chr2 (1-127)||(39682333-39682460)
chr2 (1-54)||(8946680-8946732)
chr2 (1-50)||(18786952-18787001)
chr2 (1-50)||(22134256-22134304)
chr2 (1-77)||(32451948-32452027)
chr2 (1-76)||(571417-571493)
chr2 (1-76)||(6726015-6726091)
chr2 (1-49)||(23791296-23791344)
chr2 (51-97)||(23019706-23019752)
chr2 (1-42)||(23040247-23040287)
chr2 (1-49)||(24697657-24697705)
chr2 (1-127)||(24898210-24898338)
chr2 (1-127)||(24900693-24900821)
chr2 (1-127)||(24903170-24903298)
chr2 (1-127)||(24905647-24905775)
chr2 (1-127)||(24908122-24908250)
[»] scaffold0427 (1 HSPs)
scaffold0427 (1-236)||(13520-13756)
[»] chr7 (66 HSPs)
chr7 (1-236)||(40443414-40443650)
chr7 (1-236)||(27847693-27847928)
chr7 (1-236)||(9509212-9509450)
chr7 (1-236)||(12698854-12699093)
chr7 (4-236)||(10589065-10589299)
chr7 (1-224)||(26212019-26212245)
chr7 (1-236)||(16386107-16386346)
chr7 (1-231)||(38227504-38227736)
chr7 (1-190)||(18456319-18456510)
chr7 (1-231)||(3564229-3564462)
chr7 (78-182)||(12187115-12187218)
chr7 (1-147)||(16213704-16213852)
chr7 (78-182)||(17137978-17138081)
chr7 (1-95)||(2280121-2280217)
chr7 (1-74)||(28505321-28505396)
chr7 (1-74)||(34200809-34200884)
chr7 (1-127)||(13647348-13647476)
chr7 (31-96)||(2530139-2530205)
chr7 (1-50)||(67768-67817)
chr7 (2-54)||(12901347-12901399)
chr7 (1-74)||(16495425-16495500)
chr7 (1-73)||(11996051-11996125)
chr7 (1-97)||(16219717-16219815)
chr7 (1-95)||(48273412-48273508)
chr7 (1-127)||(24704708-24704832)
chr7 (1-50)||(811180-811229)
chr7 (1-50)||(18005669-18005718)
chr7 (1-50)||(44014201-44014250)
chr7 (5-74)||(10063841-10063912)
chr7 (1-49)||(14044769-14044817)
chr7 (1-49)||(14354799-14354847)
chr7 (6-49)||(14036282-14036325)
chr7 (6-49)||(14346312-14346355)
chr7 (1-95)||(16056351-16056446)
chr7 (1-127)||(24275191-24275318)
chr7 (1-127)||(24702258-24702385)
chr7 (4-51)||(48991206-48991253)
chr7 (1-51)||(1868043-1868093)
chr7 (1-51)||(15008547-15008597)
chr7 (1-50)||(47831830-47831879)
chr7 (1-74)||(19486767-19486842)
chr7 (1-49)||(20220238-20220286)
chr7 (1-76)||(44116529-44116605)
chr7 (1-127)||(456341-456468)
chr7 (1-127)||(11393302-11393429)
chr7 (1-127)||(11972516-11972643)
chr7 (1-127)||(14949137-14949264)
chr7 (1-127)||(15376728-15376855)
chr7 (1-127)||(16232540-16232667)
chr7 (1-127)||(18430732-18430859)
chr7 (1-127)||(18640292-18640419)
chr7 (1-127)||(20385138-20385265)
chr7 (1-127)||(21189610-21189737)
chr7 (1-127)||(32125511-32125638)
chr7 (1-127)||(41522937-41523064)
chr7 (1-127)||(41525399-41525526)
chr7 (1-76)||(17061981-17062057)
chr7 (5-50)||(12255842-12255887)
chr7 (1-76)||(16410079-16410155)
chr7 (5-231)||(15211484-15211703)
chr7 (1-127)||(27216880-27217007)
chr7 (1-59)||(18154882-18154939)
chr7 (9-46)||(22072944-22072981)
chr7 (1-76)||(13869366-13869442)
chr7 (1-41)||(15144096-15144135)
chr7 (5-74)||(15754910-15754981)
[»] scaffold0114 (2 HSPs)
scaffold0114 (5-236)||(15325-15557)
scaffold0114 (78-146)||(7391-7459)
[»] scaffold0351 (1 HSPs)
scaffold0351 (1-234)||(16305-16538)
[»] scaffold0106 (3 HSPs)
scaffold0106 (1-236)||(1312-1547)
scaffold0106 (1-236)||(7289-7524)
scaffold0106 (1-47)||(15291-15336)
[»] chr4 (53 HSPs)
chr4 (4-236)||(14053162-14053396)
chr4 (1-236)||(7088900-7089138)
chr4 (1-232)||(12902780-12903014)
chr4 (1-210)||(17046510-17046719)
chr4 (3-236)||(44052854-44053090)
chr4 (4-224)||(23374231-23374454)
chr4 (1-232)||(22636458-22636691)
chr4 (1-232)||(16377387-16377619)
chr4 (1-233)||(7893726-7893958)
chr4 (104-236)||(3096772-3096904)
chr4 (1-232)||(16239834-16240067)
chr4 (1-187)||(16270145-16270333)
chr4 (5-231)||(14038675-14038904)
chr4 (1-159)||(7798797-7798958)
chr4 (114-232)||(17047936-17048055)
chr4 (1-147)||(13800-13949)
chr4 (1-147)||(6899914-6900062)
chr4 (64-150)||(15121749-15121834)
chr4 (31-150)||(43256106-43256227)
chr4 (1-97)||(52873367-52873465)
chr4 (1-74)||(15551840-15551915)
chr4 (1-50)||(12288259-12288308)
chr4 (1-50)||(12774030-12774079)
chr4 (1-50)||(52243245-52243294)
chr4 (1-95)||(14280336-14280431)
chr4 (1-59)||(3096316-3096373)
chr4 (1-127)||(22353856-22353984)
chr4 (1-51)||(46640504-46640554)
chr4 (1-50)||(39706337-39706386)
chr4 (1-49)||(53082202-53082250)
chr4 (172-231)||(15091093-15091152)
chr4 (1-127)||(18215289-18215416)
chr4 (1-127)||(44928894-44929022)
chr4 (1-95)||(54798756-54798852)
chr4 (1-141)||(19618172-19618314)
chr4 (1-141)||(23803265-23803407)
chr4 (1-43)||(43198611-43198653)
chr4 (1-77)||(6190485-6190564)
chr4 (1-95)||(8574871-8574965)
chr4 (1-50)||(8846379-8846428)
chr4 (1-127)||(12322-12449)
chr4 (1-127)||(15118367-15118494)
chr4 (1-127)||(44615308-44615435)
chr4 (1-127)||(52312530-52312657)
chr4 (1-141)||(3515027-3515169)
chr4 (1-141)||(19242719-19242861)
chr4 (1-141)||(51463868-51464010)
chr4 (1-147)||(1837503-1837651)
chr4 (1-76)||(15355391-15355467)
chr4 (1-76)||(44773153-44773229)
chr4 (1-127)||(18239434-18239561)
chr4 (16-74)||(16596686-16596746)
chr4 (5-49)||(17333304-17333347)
[»] chr6 (54 HSPs)
chr6 (1-234)||(16920495-16920728)
chr6 (1-235)||(22831526-22831762)
chr6 (1-150)||(35245609-35245758)
chr6 (4-227)||(20360829-20361055)
chr6 (1-236)||(20638143-20638381)
chr6 (1-219)||(11185528-11185746)
chr6 (1-231)||(29060563-29060796)
chr6 (1-232)||(17287660-17287894)
chr6 (5-233)||(22780090-22780321)
chr6 (1-231)||(19303406-19303638)
chr6 (1-232)||(18409691-18409925)
chr6 (1-231)||(25629220-25629453)
chr6 (1-228)||(20593796-20594026)
chr6 (1-128)||(16496267-16496396)
chr6 (1-123)||(20109161-20109285)
chr6 (5-231)||(25603250-25603478)
chr6 (1-142)||(20076723-20076863)
chr6 (31-150)||(27415887-27416008)
chr6 (1-95)||(23019429-23019525)
chr6 (1-50)||(27333267-27333316)
chr6 (1-50)||(27394007-27394056)
chr6 (1-95)||(25644343-25644440)
chr6 (1-43)||(19668394-19668436)
chr6 (1-50)||(9098563-9098612)
chr6 (1-49)||(23076753-23076801)
chr6 (5-231)||(25611588-25611816)
chr6 (1-76)||(25656649-25656725)
chr6 (1-74)||(28496494-28496569)
chr6 (1-74)||(29808905-29808980)
chr6 (1-49)||(35008171-35008219)
chr6 (5-123)||(1595573-1595692)
chr6 (1-127)||(2291195-2291322)
chr6 (1-141)||(25754829-25754971)
chr6 (1-141)||(30676710-30676852)
chr6 (1-51)||(33443070-33443119)
chr6 (1-91)||(4185827-4185919)
chr6 (1-50)||(19652218-19652267)
chr6 (1-76)||(22782247-22782323)
chr6 (1-127)||(12742337-12742464)
chr6 (1-127)||(18334607-18334734)
chr6 (1-127)||(19005066-19005193)
chr6 (1-127)||(19858934-19859061)
chr6 (1-127)||(24422567-24422694)
chr6 (1-127)||(33861814-33861941)
chr6 (1-127)||(33864298-33864425)
chr6 (1-141)||(34963393-34963535)
chr6 (4-76)||(25688525-25688598)
chr6 (4-127)||(1540926-1541050)
chr6 (1-74)||(8227534-8227609)
chr6 (2-76)||(16448593-16448668)
chr6 (1-91)||(4186390-4186482)
chr6 (2-59)||(22432269-22432325)
chr6 (2-59)||(22438819-22438875)
chr6 (5-74)||(1561330-1561401)
[»] scaffold1842 (1 HSPs)
scaffold1842 (1-236)||(909-1146)
[»] scaffold0064 (1 HSPs)
scaffold0064 (1-236)||(47018-47247)
[»] scaffold0011 (2 HSPs)
scaffold0011 (1-236)||(167839-168076)
scaffold0011 (1-232)||(51936-52170)
[»] chr1 (45 HSPs)
chr1 (1-236)||(27250589-27250827)
chr1 (4-229)||(38801258-38801483)
chr1 (1-224)||(21026703-21026929)
chr1 (1-232)||(50210077-50210311)
chr1 (53-232)||(22354436-22354616)
chr1 (1-228)||(34509803-34510033)
chr1 (1-232)||(22532292-22532526)
chr1 (5-232)||(20135214-20135444)
chr1 (87-236)||(22356034-22356185)
chr1 (87-236)||(22357720-22357871)
chr1 (5-189)||(22468604-22468790)
chr1 (114-196)||(48603652-48603735)
chr1 (31-150)||(33797573-33797694)
chr1 (1-95)||(21896258-21896354)
chr1 (1-95)||(21861572-21861668)
chr1 (1-76)||(35261099-35261176)
chr1 (1-74)||(14295574-14295649)
chr1 (1-74)||(20918627-20918702)
chr1 (1-49)||(50614167-50614215)
chr1 (1-49)||(50621995-50622043)
chr1 (1-47)||(16368338-16368384)
chr1 (1-76)||(21754068-21754145)
chr1 (1-50)||(16758672-16758721)
chr1 (1-50)||(22921918-22921967)
chr1 (1-50)||(33681030-33681079)
chr1 (168-224)||(20847091-20847147)
chr1 (1-72)||(45574912-45574985)
chr1 (1-127)||(433032-433157)
chr1 (1-141)||(21840787-21840929)
chr1 (1-141)||(23593735-23593877)
chr1 (1-51)||(41050084-41050134)
chr1 (1-54)||(20847200-20847252)
chr1 (1-95)||(22237650-22237746)
chr1 (1-50)||(52928019-52928068)
chr1 (1-76)||(22123133-22123210)
chr1 (1-49)||(26064961-26065009)
chr1 (1-127)||(13988886-13989013)
chr1 (1-127)||(21923306-21923433)
chr1 (1-127)||(29776708-29776835)
chr1 (1-48)||(50686634-50686681)
chr1 (1-51)||(16093933-16093983)
chr1 (1-47)||(20454606-20454651)
chr1 (1-73)||(15860078-15860151)
chr1 (1-50)||(20248302-20248351)
chr1 (1-127)||(21475102-21475229)
[»] chr3 (72 HSPs)
chr3 (1-236)||(20698296-20698533)
chr3 (1-236)||(13442297-13442535)
chr3 (1-236)||(17487879-17488117)
chr3 (1-236)||(17499361-17499599)
chr3 (1-222)||(12399232-12399456)
chr3 (1-232)||(14576697-14576930)
chr3 (1-231)||(14972877-14973110)
chr3 (1-232)||(26686910-26687144)
chr3 (1-231)||(23083226-23083459)
chr3 (1-232)||(14572612-14572845)
chr3 (1-228)||(18438557-18438787)
chr3 (2-205)||(43840956-43841162)
chr3 (1-232)||(25476249-25476483)
chr3 (1-190)||(24153115-24153306)
chr3 (114-231)||(16796685-16796803)
chr3 (1-232)||(40213585-40213818)
chr3 (5-232)||(11424627-11424853)
chr3 (1-191)||(42386433-42386627)
chr3 (114-196)||(14179570-14179653)
chr3 (51-236)||(30029915-30030100)
chr3 (1-50)||(12174308-12174357)
chr3 (1-95)||(15470947-15471043)
chr3 (1-50)||(32307700-32307749)
chr3 (1-50)||(49668125-49668174)
chr3 (4-146)||(856162-856304)
chr3 (1-74)||(13210350-13210425)
chr3 (1-49)||(22110402-22110450)
chr3 (5-74)||(24340746-24340817)
chr3 (1-49)||(43925981-43926029)
chr3 (1-51)||(37251216-37251266)
chr3 (1-141)||(50242842-50242984)
chr3 (2-47)||(606378-606423)
chr3 (1-50)||(9512943-9512992)
chr3 (1-50)||(9520918-9520967)
chr3 (1-95)||(27165270-27165366)
chr3 (1-50)||(52523778-52523827)
chr3 (5-74)||(23274714-23274785)
chr3 (1-127)||(9707622-9707749)
chr3 (1-127)||(29172598-29172725)
chr3 (1-127)||(53070668-53070795)
chr3 (1-51)||(12377944-12377994)
chr3 (1-141)||(12567580-12567722)
chr3 (1-141)||(13544045-13544187)
chr3 (1-141)||(17672646-17672788)
chr3 (1-43)||(28194713-28194755)
chr3 (1-76)||(53301572-53301649)
chr3 (8-94)||(14234517-14234605)
chr3 (1-46)||(16097351-16097396)
chr3 (1-50)||(16103803-16103852)
chr3 (1-95)||(36166618-36166712)
chr3 (1-74)||(37642288-37642363)
chr3 (1-76)||(43550544-43550621)
chr3 (1-127)||(7781362-7781489)
chr3 (1-127)||(8899114-8899241)
chr3 (1-127)||(17463198-17463325)
chr3 (1-127)||(28848626-28848753)
chr3 (1-127)||(34159346-34159473)
chr3 (1-127)||(38961906-38962033)
chr3 (1-127)||(45606922-45607049)
chr3 (1-127)||(55476511-55476638)
chr3 (1-95)||(21618469-21618563)
chr3 (1-93)||(55500962-55501055)
chr3 (1-76)||(6469200-6469276)
chr3 (1-76)||(8499538-8499614)
chr3 (1-49)||(13919352-13919399)
chr3 (4-127)||(17446670-17446794)
chr3 (1-127)||(16454296-16454423)
chr3 (1-73)||(16282880-16282953)
chr3 (1-76)||(12119791-12119867)
chr3 (1-127)||(13151805-13151933)
chr3 (1-127)||(13154270-13154398)
chr3 (1-76)||(15412449-15412525)
[»] scaffold0032 (1 HSPs)
scaffold0032 (1-236)||(51605-51840)
[»] chr5 (49 HSPs)
chr5 (1-236)||(21292830-21293067)
chr5 (1-236)||(23390356-23390594)
chr5 (1-224)||(22075042-22075268)
chr5 (1-232)||(8286706-8286941)
chr5 (1-232)||(25421555-25421789)
chr5 (1-232)||(25431417-25431651)
chr5 (1-232)||(24493592-24493825)
chr5 (1-232)||(13025334-13025567)
chr5 (1-232)||(13095518-13095751)
chr5 (9-228)||(9077983-9078205)
chr5 (1-232)||(24529243-24529477)
chr5 (113-232)||(22107237-22107357)
chr5 (1-229)||(1096490-1096721)
chr5 (1-142)||(21808343-21808487)
chr5 (1-128)||(21729033-21729162)
chr5 (5-95)||(37723930-37724020)
chr5 (31-150)||(18356367-18356488)
chr5 (78-182)||(18769919-18770022)
chr5 (1-76)||(21997555-21997632)
chr5 (78-182)||(22032417-22032520)
chr5 (78-150)||(23572180-23572252)
chr5 (1-76)||(26012056-26012133)
chr5 (1-94)||(20026942-20027039)
chr5 (1-94)||(21329500-21329595)
chr5 (31-150)||(20910745-20910866)
chr5 (1-50)||(19660884-19660933)
chr5 (1-50)||(21502205-21502254)
chr5 (1-95)||(22144072-22144168)
chr5 (1-50)||(22959581-22959630)
chr5 (1-74)||(36314600-36314675)
chr5 (1-93)||(21565565-21565659)
chr5 (114-232)||(21986011-21986130)
chr5 (1-190)||(22412207-22412388)
chr5 (1-127)||(29329954-29330081)
chr5 (31-190)||(18418633-18418793)
chr5 (1-51)||(22178269-22178319)
chr5 (1-76)||(11581265-11581341)
chr5 (1-76)||(20902075-20902151)
chr5 (1-127)||(264783-264910)
chr5 (1-127)||(10732955-10733082)
chr5 (1-127)||(20909032-20909159)
chr5 (1-48)||(26732884-26732930)
chr5 (1-127)||(39363404-39363531)
chr5 (1-76)||(39245156-39245232)
chr5 (1-74)||(40725876-40725951)
chr5 (2-76)||(18319100-18319175)
chr5 (1-48)||(26740697-26740743)
chr5 (1-127)||(42245380-42245507)
chr5 (1-76)||(2154680-2154756)
[»] scaffold0358 (2 HSPs)
scaffold0358 (1-236)||(4735-4972)
scaffold0358 (53-236)||(13-196)
[»] scaffold0718 (1 HSPs)
scaffold0718 (1-236)||(4991-5226)
[»] scaffold0193 (1 HSPs)
scaffold0193 (5-236)||(13238-13472)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-236)||(1874-2112)
[»] scaffold0088 (1 HSPs)
scaffold0088 (1-231)||(20933-21167)
[»] scaffold0490 (1 HSPs)
scaffold0490 (1-236)||(1975-2213)
[»] scaffold0292 (2 HSPs)
scaffold0292 (1-232)||(3493-3727)
scaffold0292 (1-232)||(366-599)
[»] scaffold0042 (1 HSPs)
scaffold0042 (1-236)||(24161-24401)
[»] scaffold0647 (1 HSPs)
scaffold0647 (1-234)||(5983-6222)
[»] scaffold0403 (1 HSPs)
scaffold0403 (1-224)||(4872-5098)
[»] scaffold0540 (1 HSPs)
scaffold0540 (1-232)||(3015-3248)
[»] scaffold0145 (3 HSPs)
scaffold0145 (1-232)||(38784-39017)
scaffold0145 (1-187)||(32965-33153)
scaffold0145 (1-76)||(9769-9845)
[»] scaffold0309 (1 HSPs)
scaffold0309 (38-236)||(6669-6871)
[»] scaffold0021 (5 HSPs)
scaffold0021 (66-236)||(124675-124846)
scaffold0021 (1-95)||(174789-174883)
scaffold0021 (1-54)||(136414-136467)
scaffold0021 (1-54)||(145122-145175)
scaffold0021 (1-48)||(121789-121835)
[»] scaffold0026 (2 HSPs)
scaffold0026 (1-232)||(25919-26152)
scaffold0026 (1-232)||(39881-40113)
[»] scaffold0003 (3 HSPs)
scaffold0003 (1-228)||(339818-340045)
scaffold0003 (31-150)||(71353-71474)
scaffold0003 (1-127)||(158465-158592)
[»] scaffold0231 (1 HSPs)
scaffold0231 (1-232)||(22906-23139)
[»] scaffold0122 (3 HSPs)
scaffold0122 (1-231)||(25930-26163)
scaffold0122 (130-231)||(33360-33461)
scaffold0122 (5-95)||(44709-44801)
[»] scaffold0141 (1 HSPs)
scaffold0141 (1-228)||(39500-39729)
[»] scaffold0121 (1 HSPs)
scaffold0121 (1-205)||(8424-8627)
[»] scaffold0049 (1 HSPs)
scaffold0049 (1-228)||(75083-75312)
[»] scaffold0175 (2 HSPs)
scaffold0175 (28-232)||(13141-13349)
scaffold0175 (1-74)||(34146-34221)
[»] scaffold0080 (2 HSPs)
scaffold0080 (1-232)||(39936-40169)
scaffold0080 (1-51)||(19933-19983)
[»] scaffold0056 (1 HSPs)
scaffold0056 (1-232)||(17079-17315)
[»] scaffold0228 (3 HSPs)
scaffold0228 (1-231)||(4531-4763)
scaffold0228 (1-231)||(12113-12345)
scaffold0228 (1-231)||(22065-22297)
[»] scaffold0217 (1 HSPs)
scaffold0217 (1-230)||(16466-16698)
[»] scaffold0484 (1 HSPs)
scaffold0484 (114-232)||(1052-1171)
[»] scaffold0165 (3 HSPs)
scaffold0165 (134-232)||(3640-3738)
scaffold0165 (134-232)||(7704-7802)
scaffold0165 (1-76)||(27770-27847)
[»] scaffold0639 (1 HSPs)
scaffold0639 (1-232)||(8502-8732)
[»] scaffold0120 (3 HSPs)
scaffold0120 (1-231)||(32824-33054)
scaffold0120 (1-231)||(45951-46181)
scaffold0120 (1-186)||(16136-16323)
[»] scaffold0908 (1 HSPs)
scaffold0908 (1-179)||(3103-3284)
[»] scaffold0215 (1 HSPs)
scaffold0215 (4-182)||(26850-27027)
[»] scaffold0130 (1 HSPs)
scaffold0130 (58-231)||(27912-28086)
[»] scaffold0046 (4 HSPs)
scaffold0046 (1-114)||(28437-28552)
scaffold0046 (1-74)||(11315-11390)
scaffold0046 (1-74)||(2020-2095)
scaffold0046 (1-34)||(4575-4608)
[»] scaffold0235 (2 HSPs)
scaffold0235 (2-93)||(11447-11540)
scaffold0235 (169-232)||(11377-11440)
[»] scaffold0070 (1 HSPs)
scaffold0070 (1-231)||(4547-4779)
[»] scaffold1124 (1 HSPs)
scaffold1124 (78-146)||(1977-2045)
[»] scaffold0210 (2 HSPs)
scaffold0210 (78-182)||(21721-21824)
scaffold0210 (78-182)||(29613-29716)
[»] scaffold0029 (2 HSPs)
scaffold0029 (78-150)||(12859-12931)
scaffold0029 (1-141)||(11308-11450)
[»] scaffold0075 (1 HSPs)
scaffold0075 (8-147)||(53498-53640)
[»] scaffold0107 (1 HSPs)
scaffold0107 (31-150)||(15362-15483)
[»] scaffold0034 (2 HSPs)
scaffold0034 (1-76)||(32559-32636)
scaffold0034 (1-236)||(51744-51981)
[»] scaffold2014 (1 HSPs)
scaffold2014 (1-95)||(1055-1151)
[»] scaffold0621 (2 HSPs)
scaffold0621 (1-123)||(8489-8613)
scaffold0621 (1-50)||(6558-6607)
[»] scaffold0413 (1 HSPs)
scaffold0413 (1-95)||(12591-12687)
[»] scaffold0352 (1 HSPs)
scaffold0352 (155-232)||(17851-17928)
[»] scaffold0023 (6 HSPs)
scaffold0023 (1-95)||(100397-100493)
scaffold0023 (1-50)||(119898-119947)
scaffold0023 (1-141)||(17440-17582)
scaffold0023 (5-49)||(40224-40268)
scaffold0023 (1-127)||(94431-94558)
scaffold0023 (1-50)||(101522-101571)
[»] scaffold0261 (1 HSPs)
scaffold0261 (1-74)||(15684-15759)
[»] scaffold0084 (1 HSPs)
scaffold0084 (135-231)||(10323-10419)
[»] scaffold0010 (2 HSPs)
scaffold0010 (2-54)||(60761-60813)
scaffold0010 (1-95)||(129928-130024)
[»] scaffold0716 (1 HSPs)
scaffold0716 (1-141)||(4714-4856)
[»] scaffold0327 (1 HSPs)
scaffold0327 (53-201)||(3424-3574)
[»] scaffold0139 (1 HSPs)
scaffold0139 (1-51)||(38339-38389)
[»] scaffold0123 (1 HSPs)
scaffold0123 (1-51)||(25129-25179)
[»] scaffold0628 (1 HSPs)
scaffold0628 (1-95)||(2808-2904)
[»] scaffold0555 (1 HSPs)
scaffold0555 (1-95)||(10543-10639)
[»] scaffold0357 (3 HSPs)
scaffold0357 (1-95)||(13151-13247)
scaffold0357 (1-76)||(16121-16198)
scaffold0357 (1-49)||(2684-2732)
[»] scaffold0218 (1 HSPs)
scaffold0218 (1-54)||(8119-8172)
[»] scaffold0102 (1 HSPs)
scaffold0102 (1-50)||(19287-19336)
[»] scaffold0461 (1 HSPs)
scaffold0461 (5-74)||(11491-11562)
[»] scaffold0184 (1 HSPs)
scaffold0184 (1-74)||(1092-1167)
[»] scaffold0124 (1 HSPs)
scaffold0124 (5-74)||(38279-38350)
[»] scaffold0008 (1 HSPs)
scaffold0008 (1-49)||(14747-14795)
[»] scaffold0395 (1 HSPs)
scaffold0395 (38-232)||(827-1021)
[»] scaffold1403 (1 HSPs)
scaffold1403 (1-47)||(573-619)
[»] scaffold0761 (1 HSPs)
scaffold0761 (1-141)||(4317-4459)
[»] scaffold0420 (2 HSPs)
scaffold0420 (1-51)||(6332-6382)
scaffold0420 (1-44)||(13793-13836)
[»] scaffold0022 (3 HSPs)
scaffold0022 (1-47)||(78345-78391)
scaffold0022 (1-49)||(129021-129068)
scaffold0022 (1-95)||(116450-116544)
[»] scaffold0001 (3 HSPs)
scaffold0001 (1-76)||(160707-160784)
scaffold0001 (1-141)||(501104-501246)
scaffold0001 (1-76)||(85646-85722)
[»] scaffold1765 (1 HSPs)
scaffold1765 (1-50)||(1105-1154)
[»] scaffold0556 (1 HSPs)
scaffold0556 (1-50)||(6835-6884)
[»] scaffold0333 (2 HSPs)
scaffold0333 (1-50)||(6634-6683)
scaffold0333 (1-50)||(14014-14063)
[»] scaffold0278 (1 HSPs)
scaffold0278 (1-50)||(5666-5715)
[»] scaffold0243 (1 HSPs)
scaffold0243 (1-50)||(6172-6221)
[»] scaffold0207 (1 HSPs)
scaffold0207 (1-50)||(2694-2743)
[»] scaffold0100 (1 HSPs)
scaffold0100 (1-50)||(23932-23981)
[»] scaffold0074 (1 HSPs)
scaffold0074 (1-95)||(38704-38800)
[»] scaffold0037 (2 HSPs)
scaffold0037 (1-95)||(22672-22768)
scaffold0037 (1-141)||(82092-82234)
[»] scaffold0031 (2 HSPs)
scaffold0031 (1-127)||(20394-20520)
scaffold0031 (53-142)||(128827-128917)
[»] scaffold0020 (1 HSPs)
scaffold0020 (1-50)||(15826-15875)
[»] scaffold0305 (1 HSPs)
scaffold0305 (168-236)||(20596-20664)
[»] scaffold0247 (1 HSPs)
scaffold0247 (5-74)||(18050-18121)
[»] scaffold0028 (7 HSPs)
scaffold0028 (2-50)||(62222-62270)
scaffold0028 (1-127)||(134231-134358)
scaffold0028 (1-127)||(136700-136827)
scaffold0028 (1-127)||(139169-139296)
scaffold0028 (1-127)||(144107-144234)
scaffold0028 (1-42)||(132681-132722)
scaffold0028 (1-127)||(141638-141765)
[»] scaffold0454 (1 HSPs)
scaffold0454 (1-141)||(10793-10935)
[»] scaffold0090 (1 HSPs)
scaffold0090 (1-51)||(2698-2748)
[»] scaffold0530 (1 HSPs)
scaffold0530 (1-50)||(1083-1132)
[»] scaffold0125 (1 HSPs)
scaffold0125 (1-50)||(45841-45890)
[»] scaffold0078 (1 HSPs)
scaffold0078 (1-95)||(10550-10646)
[»] scaffold0476 (1 HSPs)
scaffold0476 (1-94)||(12789-12884)
[»] scaffold0142 (1 HSPs)
scaffold0142 (1-76)||(16804-16880)
[»] scaffold0138 (1 HSPs)
scaffold0138 (1-94)||(12962-13057)
[»] scaffold0006 (2 HSPs)
scaffold0006 (1-49)||(97028-97076)
scaffold0006 (1-49)||(106306-106354)
[»] scaffold0444 (1 HSPs)
scaffold0444 (1-127)||(13412-13539)
[»] scaffold0254 (1 HSPs)
scaffold0254 (1-127)||(20767-20894)
[»] scaffold0134 (1 HSPs)
scaffold0134 (1-127)||(37841-37968)
[»] scaffold1439 (1 HSPs)
scaffold1439 (1-141)||(126-268)
[»] scaffold0040 (1 HSPs)
scaffold0040 (1-51)||(103679-103729)
[»] scaffold0005 (1 HSPs)
scaffold0005 (1-51)||(267683-267733)
[»] scaffold1984 (1 HSPs)
scaffold1984 (1-50)||(152-201)
[»] scaffold0014 (1 HSPs)
scaffold0014 (4-49)||(206575-206619)
[»] scaffold0149 (1 HSPs)
scaffold0149 (1-76)||(29952-30028)
[»] scaffold0230 (1 HSPs)
scaffold0230 (1-127)||(13967-14094)
[»] scaffold0507 (1 HSPs)
scaffold0507 (1-97)||(8059-8159)
[»] scaffold0363 (1 HSPs)
scaffold0363 (1-141)||(9262-9404)
[»] scaffold0211 (1 HSPs)
scaffold0211 (1-50)||(28818-28868)
[»] scaffold0150 (1 HSPs)
scaffold0150 (1-42)||(32121-32162)
[»] scaffold0017 (1 HSPs)
scaffold0017 (5-75)||(192997-193070)
[»] scaffold0044 (1 HSPs)
scaffold0044 (1-76)||(40420-40496)
[»] scaffold0007 (1 HSPs)
scaffold0007 (1-76)||(161156-161232)
[»] scaffold0004 (1 HSPs)
scaffold0004 (113-182)||(69930-70000)


Alignment Details
Target: scaffold0456 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 10521 - 10286
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaacatgacataataatatcaatttcaattcatcaacatcttatgt 100  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||    
T  10521 gaccgactcatgcagcatagttaattaacaaacagcaacataggcagtatacaacagcatgacataataatatcaatttcaattcaacaacatcttaagt 10422  T
Q  101 atacaaatattcttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcatt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  | |||    
T  10421 atacaaatattcttcaagtaatgcataatcattatatcacatcataatcatcaacgacatatcttatacagcttcacagattataattaaccttattatt 10322  T
Q  201 aagtcttaatgctgcccaaaggttcaactctcgaca 236  Q
    |||||||||| || ||||| ||||||||||||||||    
T  10321 aagtcttaattctacccaagggttcaactctcgaca 10286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 175; Significance: 2e-94; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 31971280 - 31971516
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatcttat 98  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||    
T  31971280 gaccgactcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaacaacatgacataataatatcaattccaattcatcaacatcttat 31971378  T
Q  99 gtatacaaatattcttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttca 198  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |      
T  31971379 gtatacaaatattcttcaagtaatgcataaacattatatcacatcataatcaacaacaacatatcttatacatcttcacagattataattaacctcattg 31971478  T
Q  199 ttaagtcttaatgctgcccaaaggttcaactctcgaca 236  Q
    |||||||||||| || |||||||||||| |||||||||    
T  31971479 ttaagtcttaatcctacccaaaggttcagctctcgaca 31971516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 16199742 - 16199506
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa-caacatgacataataatatcaatttcaattcatcaacatcttatg 99  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||| |||||||| |    
T  16199742 gaccgactcatgcagcttagttaaataacaaacagcaacatagacagtattcaaacaacatgacataataatatcaatttcaattcatctacatcttagg 16199643  T
Q  100 tatacaaatattcttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcat 199  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |  |    
T  16199642 tatacaaatattcttcaagtaatgcataaacattatattacatcataatcaacaacaacatatcttatacagcttcacagattataattaacctcattgt 16199543  T
Q  200 taagtcttaatgctgcccaaaggttcaactctcgaca 236  Q
    ||||||||||| || ||||| ||||||||||||||||    
T  16199542 taagtcttaatcctacccaagggttcaactctcgaca 16199506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 45131094 - 45130858
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa-caacatgacataataatatcaatttcaa-ttcatcaacatcttat 98  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||| |||| || ||||||||||||||||||||||||| |||||||||||||||     
T  45131094 gaccgactcatgcagcttagttaaataacaa-cagcaacataggcagtaaacaaacagcatgacataataatatcaatttcaaattcatcaacatcttag 45130996  T
Q  99 gtatacaaatattcttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttca 198  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | |    
T  45130995 gtatacaattattcttcaagtaatgcataaacattatatcacatcataatcatcaacaacaaatcttatacagcttcacagattataattaacctcatta 45130896  T
Q  199 ttaagtcttaatgctgcccaaaggttcaactctcgaca 236  Q
    |||||||||||| || ||||| ||| ||||||||||||    
T  45130895 ttaagtcttaatcctacccaagggtccaactctcgaca 45130858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 21396078 - 21395883
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaacatgacataataatatcaatttcaattcatcaacatcttatgt 100  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||| ||||| ||||||| |||||||||||||||||||||||    
T  21396078 gaccgactcatgcagcttagttaaataacaaacaacaacataggcagtatacaacagcatgagataattatatcaaattcaattcatcaacatcttatgt 21395979  T
Q  101 atacaaatattcttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctctt 196  Q
    ||||||| |||||||||||||||||||| ||||||| ||| |||||||||  ||||||||||||||| ||||||||||||||| ||||||| ||||    
T  21395978 atacaaacattcttcaagtaatgcataaacattataacacttcataatcaataacaacatatcttattcagcttcacagattacaattaacttctt 21395883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 21790571 - 21790376
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaacatgacataataatatcaatttcaattcatcaacatcttatgt 100  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||| ||||| ||||||| |||||||||||||||||||||||    
T  21790571 gaccgactcatgcagcttagttaaataacaaacaacaacataggcagtatacaacagcatgagataattatatcaaattcaattcatcaacatcttatgt 21790472  T
Q  101 atacaaatattcttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctctt 196  Q
    ||||||| |||||||||||||||||||| ||||||| ||| |||||||||  ||||||||||||||| ||||||||||||||| ||||||| ||||    
T  21790471 atacaaacattcttcaagtaatgcataaacattataacacttcataatcaataacaacatatcttattcagcttcacagattacaattaacttctt 21790376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 21389548 - 21389358
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaacatgacataataatatcaatttcaattcatcaacatcttatgt 100  Q
    |||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||    
T  21389548 gaccgactcatgcagcttagttaaataacaaacaacaacataggtagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgt 21389449  T
Q  101 atacaaatattcttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaac 191  Q
    ||||||| |||||||||||||||||||| ||||||| ||| ||||||||| |||||||||||||||| |||||||||| |||| |||||||    
T  21389448 atacaaacattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacatattacaattaac 21389358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 21778874 - 21778697
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaacatgacataataatatcaatttcaattcatcaacatcttatgt 100  Q
    |||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||    
T  21778874 gaccgactcatgcagcttagttaaataacaaacaacaacataggtagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgt 21778775  T
Q  101 atacaaatattcttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcaca 178  Q
    ||||||| |||||||||||||||||||| ||||||| ||| ||||||||| |||||||||||||||| ||||||||||    
T  21778774 atacaaacattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcaca 21778697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 21919098 - 21918860
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||   ||||||||||||||||||| ||||||| ||||||||||    
T  21919098 gaccgactcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcaacaacatctta 21919000  T
Q  98 tgtatacaaata-ttcttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctctt 196  Q
      ||| |||||| ||||||||||||||||||| ||||||||||||||||||||| || ||||| |||||| ||||||||||||||  ||||||||||| |    
T  21918999 aatattcaaataattcttcaagtaatgcataaacattatatcacatcataatcagcagcaacacatcttaaacagcttcacagatcgtaattaacctcat 21918900  T
Q  197 cattaagtcttaatgctgcccaaaggttcaactctcgaca 236  Q
    | ||||||||||||  | ||||| ||||||||||||||||    
T  21918899 cgttaagtcttaatcttacccaagggttcaactctcgaca 21918860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 20536231 - 20536469
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||||| ||| |||||||||||||||||| ||||   ||||||||||||||||||| ||||||||||||||||||    
T  20536231 gaccgactcatgcagcttagttaaataacaa-cagaaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatctta 20536329  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctctt 196  Q
      ||| |||||||||||||||||||||| | | ||||||||||||||||||||  || ||||| |||||| ||| |||||||||||||||||||| || |    
T  20536330 aatattcaaatattcttcaagtaatgcacataacattatatcacatcataatcgacatcaacacatcttaaacaacttcacagattataattaacatcct 20536429  T
Q  197 cattaagtcttaatgctgcccaaaggttcaactctcgaca 236  Q
    |||||||||||||| || ||| |||||||||| |||||||    
T  20536430 cattaagtcttaatactaccccaaggttcaacactcgaca 20536469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 18879329 - 18879097
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaacatgacataataatatcaatttcaattcatcaacatcttatgt 100  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||  ||||||||||||||||| ||||||||||||||||||  |    
T  18879329 gaccgactcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaaca--acataataatatcaattgcaattcatcaacatcttaaat 18879233  T
Q  101 atacaaatattcttcaagtaatg--cataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttca 198  Q
    || ||||||||||||||||||||  ||||| ||||||||||||||||||||| || || || ||||||| ||||||||||||||||| ||||| || |||    
T  18879232 attcaaatattcttcaagtaatgctcataa-cattatatcacatcataatcaacatcagcacatcttat-cagcttcacagattatagttaacatcatca 18879135  T
Q  199 ttaagtcttaatgctgcccaaaggttcaactctcgaca 236  Q
    ||||||||| |||||  || ||||||||||||||||||    
T  18879134 ttaagtcttgatgctatcccaaggttcaactctcgaca 18879097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 22626759 - 22626992
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatcttat 98  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||  |||||||||||||||||||||| | ||| ||| ||||||||||     
T  22626759 gaccgactcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaacaacatgacataataatatcaaatacaaatcaacaacatcttaa 22626857  T
Q  99 gtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttc 197  Q
     ||| ||| ||| ||||||||||||  || | |||||||||||||||| ||||||| ||||| |||||| |||||||||||||||||||||||| || ||    
T  22626858 atattcaattatacttcaagtaatgtgtataacattatatcacatcattatcatcatcaacacatcttaaacagcttcacagattataattaacatcctc 22626957  T
Q  198 attaagtcttaatgctgcccaaaggttcaactctc 232  Q
    ||||||||| ||| || ||| ||||||||||||||    
T  22626958 attaagtctcaatactaccccaaggttcaactctc 22626992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 18818507 - 18818273
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||   |||||||||||||||||||  || ||| || |||||||    
T  18818507 gaccgactcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacataataatatcaattgtaagtcaacatcatctta 18818409  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctctt 196  Q
      ||| ||| ||| |||||||||||||| | | |||||||||||| |||||||| || ||||| |||||| |||||||||||||||||||||||| || |    
T  18818408 aatattcaattatacttcaagtaatgcacataacattatatcacaacataatcaacatcaacacatcttaaacagcttcacagattataattaacatcct 18818309  T
Q  197 cattaagtcttaatgctgcccaaaggttcaactctc 232  Q
    |||||||||||||| || ||| ||  ||||||||||    
T  18818308 cattaagtcttaatactaccctaaatttcaactctc 18818273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 21924026 - 21923792
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa---caacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||| |||||   ||||||||||| |||||||||||| ||| ||| ||||||||||    
T  21924026 gaccgactcatgcagcttagttaaataacaa-cagcaacataggcagtctacaaaaacaacatgacatgataatatcaattgcaagtcaacaacatctta 21923928  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctctt 196  Q
      ||| ||| ||| |||||||||||||| | | | |||| |  ||||||||||| |||||||| |||||| |||||||||||||||||||||||| || |    
T  21923927 aatattcaattatacttcaagtaatgcacataaccttattttgcatcataatcaacaacaacacatcttaaacagcttcacagattataattaacatcat 21923828  T
Q  197 cattaagtcttaatgctgcccaaaggttcaactctc 232  Q
    |||||||||||||| || ||  ||||||||||||||    
T  21923827 cattaagtcttaatactacctcaaggttcaactctc 21923792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 28649142 - 28648908
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||||   |||| ||||||||||||||||||| | ||| ||| ||||||||||    
T  28649142 gaccgactcatgcagcttagttaaataacaaa-agcaacataggcagtatacgaaaacagcatgacataataatatcaaatgcaagtcaacaacatctta 28649044  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctctt 196  Q
      ||||||   ||  |||||||||||  || | ||||||||||||||||||||| || ||||| |||||| ||||||||||| |||||||||||| || |    
T  28649043 attatacattcataattcaagtaatgtgtataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacatattataattaacatcat 28648944  T
Q  197 cattaagtcttaatgctgcccaaaggttcaactctc 232  Q
    |||||||||| ||| || ||| ||||||||||||||    
T  28648943 cattaagtctcaatactaccccaaggttcaactctc 28648908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 5 - 232
Target Start/End: Original strand, 23648580 - 23648810
Alignment:
Q  5 gactcatgcagcttagttaattaacaaacagcaacataggcagtat---acaacaacatgacataataatatcaatttcaattcatcaacatcttatgta 101  Q
    |||||||||| |||||||||||||| || ||||||||||||||  |   ||||||||||||||||||||||||| || |||| || ||||||||||  ||    
T  23648580 gactcatgcaacttagttaattaac-aatagcaacataggcagattacaacaacaacatgacataataatatcatttgcaatacaacaacatcttaaata 23648678  T
Q  102 tacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcatt 200  Q
    | |||  |  |||||||||||||| | | ||||||||||||||||||||| || ||||| |||||| ||||||| |||||||||||||||| || |||||    
T  23648679 ttcaataaaacttcaagtaatgcacacaacattatatcacatcataatcaacatcaacacatcttaaacagcttaacagattataattaacatcatcatt 23648778  T
Q  201 aagtcttaatgctgcccaaaggttcaactctc 232  Q
    | |||||||| || ||| ||||||||||||||    
T  23648779 aggtcttaatactaccccaaggttcaactctc 23648810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 7372801 - 7373001
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||   ||||||||||||||||||| ||| ||| || |||||||    
T  7372801 gaccgactcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcaacatcatctta 7372899  T
Q  98 tgtatacaaatattcttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttc 197  Q
      ||| ||| ||| |||||||||||||       |||||||||| |||||||| || ||||| |||||| |||||||||||||||||||||||| || ||    
T  7372900 aatattcaattatacttcaagtaatgc-------ttatatcacaacataatcaacatcaacacatcttaaacagcttcacagattataattaacatcctc 7372992  T
Q  198 attaagtct 206  Q
    |||||||||    
T  7372993 attaagtct 7373001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 23406402 - 23406611
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa---caacatgacataataatatcaatttcaattcatcaa--catct 95  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||   |||||||||||||||||||||||| ||| ||| ||   |||||    
T  23406402 gaccgactcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacaacatgacataataatatcaattgcaagtcaacatatcatct 23406500  T
Q  96 tatgtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctc 194  Q
    ||  ||| ||| ||| |||||||||||||| | | |||||||||||| |||| ||| || ||||| |||||| ||| ||||||| |||||||||||| ||    
T  23406501 taaatattcaattatacttcaagtaatgcacataacattatatcacaacatagtcaacatcaacacatcttaaacaacttcacatattataattaacatc 23406600  T
Q  195 ttcattaagtc 205  Q
     ||||||||||    
T  23406601 ctcattaagtc 23406611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 6759281 - 6759512
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa---caacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||||| |||||||| |||||||||||||   |||||||||||||||||||||| | ||| |||   |||||| |    
T  6759281 gaccgactcatgcagcttagttaaataacaa-cagcaacacaggcagtatacaaaaacaacatgacataataatatcaaatgcaagtca---acatctca 6759376  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttata-cagcttcacagattataattaacctct 195  Q
      ||||||   ||  ||||| |||||| || | ||||||||||||||||||||| || ||||| |||||| | ||||||||||||||||||||||| ||     
T  6759377 attatacactcataattcaattaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaaacagcttcacagattataattaacatca 6759476  T
Q  196 tcattaagtcttaatgctgcccaaaggttcaactct 231  Q
    ||||||||||| ||| || ||| |||||||||||||    
T  6759477 tcattaagtctcaatactaccccaaggttcaactct 6759512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 114 - 232
Target Start/End: Complemental strand, 25363123 - 25363004
Alignment:
Q  114 tcaagtaatgcataat-cattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaatgc 212  Q
    |||||||||||||||  ||||||| ||||||||||||| |||||||| |||||| |||||||||||||||||||||| |||||||||||||||||||| |    
T  25363123 tcaagtaatgcataaaacattataccacatcataatcaacaacaacacatcttaaacagcttcacagattataattagcctcttcattaagtcttaatac 25363024  T
Q  213 tgcccaaaggttcaactctc 232  Q
    | ||||||||||||||||||    
T  25363023 tacccaaaggttcaactctc 25363004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 22875088 - 22875321
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatcttat 98  Q
    |||||||||||||||||||||||| || ||  |||||||| |||||||||||||  |||||||||||||||||||||| | ||| ||| |||||||| |     
T  22875088 gaccgactcatgcagcttagttaaatagcag-cagcaacacaggcagtatacaaaacaacatgacataataatatcaaatgcaagtcaacaacatctcaa 22875186  T
Q  99 gtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttata-cagcttcacagattataattaacctctt 196  Q
     ||||||   ||  |||||||||||| || | ||||||||||||||||||||| || ||||| |||||| | ||||||||||||||||||||||| ||      
T  22875187 atatacattcataattcaagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaaacagcttcacagattataattaacatcac 22875286  T
Q  197 cattaagtcttaatgctgcccaaaggttcaactct 231  Q
    |||||  ||| ||| || ||| |||||||||||||    
T  22875287 cattacatctcaatactaccccaaggttcaactct 22875321  T

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Target: chr8; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 16092440 - 16092206
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| |||||||||||   |||| ||||||||||||||||||| | ||| ||| |||||||| |    
T  16092440 gaccgactcatgcagcttagttaaataac-aacagcaacacaggcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacatctca 16092342  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatctt-atacagcttcacagattataattaacctct 195  Q
      ||||||   ||  || ||||||||| || | ||||||||||||||||||||| || ||||| ||||| | ||| |||| || |||||||||||| ||     
T  16092341 aatatacattcataatttaagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaaacaacttcgcatattataattaacatca 16092242  T
Q  196 tcattaagtcttaatgctgcccaaaggttcaactct 231  Q
    || |||||||| |||  | ||| |||||||||||||    
T  16092241 tccttaagtctcaatattaccccaaggttcaactct 16092206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 17140939 - 17141014
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatatc 74  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| |||  || |||||||||||||||||    
T  17140939 gaccgactcatgcagcttagttaaataacaaacagcaacataggcagtatgcaatccatcatgacataataatatc 17141014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 5866372 - 5866297
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatatc 74  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| |||  || ||||| |||||||||||    
T  5866372 gaccgactcatgcagcttagttaaataacaaacagcaacataggcagtatgcaaaccatcatgatataataatatc 5866297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 6520391 - 6520486
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatc 94  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| |||  || ||||| |||| |||||| | | ||| |||||||||||    
T  6520391 gaccgactcatgcagcttagttaaataacaaacagcaacataggcagtatgcaaatcatcatgatataacaatatcgaatgcaagtcatcaacatc 6520486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 21491018 - 21491092
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatat 73  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| |||  || ||||| ||||||||||    
T  21491018 gaccgactcatgcagcttagttaaataacaaacagcaacataggcagtatgcaaaccatcatgatataataatat 21491092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 19154984 - 19154935
Alignment:
Q  2 accgactcatgcagcttagttaattaacaaacagcaacataggcagtata 51  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  19154984 accgactcatgcagcttagttaataaacaaacagcaacataggcagtata 19154935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 20498585 - 20498681
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagta--tacaacaacatgacataataatatcaatttcaattcatcaacatct 95  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||||  || || | ||||| |||| |||||||| | ||| ||||||||||||    
T  20498585 gaccgactcatgcaacttagttaataaacaaacagcaacataggcagtatgtaaaatagcatgatataacaatatcaaatgcaagtcatcaacatct 20498681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 21285620 - 21285716
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat--acaacaacatgacataataatatcaatttcaattcatcaacatct 95  Q
    |||||||||||||||||| ||||| ||||||||| |||||||||||||||  | |||||||||| |||| |||||||| | ||| ||| ||||||||    
T  21285620 gaccgactcatgcagctttgttaaataacaaacaacaacataggcagtatgcaaaacaacatgatataacaatatcaaatgcaaatcaacaacatct 21285716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 23760942 - 23760893
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat 50  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  23760942 gaccgactcatgcagcttagttaaataacaaacagcaacataggcagtat 23760893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 38855349 - 38855300
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat 50  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  38855349 gaccgactcatgcagcttagttaaataacaaacagcaacataggcagtat 38855300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 13508179 - 13508108
Alignment:
Q  5 gactcatgcagcttagttaattaacaaacagcaacataggcagtat--acaacaacatgacataataatatc 74  Q
    ||||||||||||||||||||||||||| |||||||||||||| |||  |||||| ||||| |||||||||||    
T  13508179 gactcatgcagcttagttaattaacaatcagcaacataggcaatatgcacaacatcatgatataataatatc 13508108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 24353043 - 24353091
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagta 49  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  24353043 gaccgactcatgcagcttagttaataaacaaacagcaacataggcagta 24353091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 37116370 - 37116418
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagta 49  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  37116370 gaccgactcatgcagcttagttaataaacaaacagcaacataggcagta 37116418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 16413458 - 16413316
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| | |||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  16413458 gaccgactcatgcagcttagttaaataac-aacagcaacaca-gcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctca 16413361  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcaca 141  Q
      ||| || ||||  ||||||||||||||| || |||||||||||    
T  16413360 attattcacatataattcaagtaatgcatatataattatatcaca 16413316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 983504 - 983455
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat 50  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  983504 gaccgactcatgcagcttagttaaataacaatcagcaacataggcagtat 983455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 17267092 - 17267044
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagta 49  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  17267092 gaccgactcatgcagcttagttaataaacaaacaacaacataggcagta 17267044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 17612204 - 17612133
Alignment:
Q  5 gactcatgcagcttagttaattaacaaacagcaacataggcagtat--acaacaacatgacataataatatc 74  Q
    ||||||||||||||||||||||||||| || |||||||||||||||  | |||| ||||| |||||||||||    
T  17612204 gactcatgcagcttagttaattaacaatcaacaacataggcagtatgcaaaacatcatgatataataatatc 17612133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 14409586 - 14409459
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| | |||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  14409586 gaccgactcatgcagcttagttaaataac-aacagcaacaca-gcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctca 14409489  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  14409488 attattcacatataattcaagtaatgcata 14409459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 17439603 - 17439557
Alignment:
Q  3 ccgactcatgcagcttagttaattaacaaacagcaacataggcagta 49  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||    
T  17439603 ccgactcatgcagcttagttaataaacaaacaacaacataggcagta 17439557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 26355796 - 26355747
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat 50  Q
    ||||||||||||||||||||||||  |||||||| |||||||||||||||    
T  26355796 gaccgactcatgcagcttagttaaacaacaaacaacaacataggcagtat 26355747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 13597711 - 13597640
Alignment:
Q  5 gactcatgcagcttagttaattaacaaacagcaacataggcagtat--acaacaacatgacataataatatc 74  Q
    ||||||||||||||||||||||||||| |||||||||| |||| ||  | |||| ||||| |||||||||||    
T  13597711 gactcatgcagcttagttaattaacaatcagcaacataagcagaatgcaaaacatcatgatataataatatc 13597640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 20046337 - 20046261
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaa 76  Q
    |||||||||||||||||||||||| |||| |||||||||| |  ||||||||   ||||||||||||||||||||||||    
T  20046337 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacaacatgacataataatatcaa 20046261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 1484422 - 1484549
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  1484422 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctca 1484519  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  1484520 attattcacatataattcaagtaatgcata 1484549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 5853434 - 5853307
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  5853434 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctca 5853337  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  5853336 attattcacatataattcaagtaatgcata 5853307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 20403247 - 20403374
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  20403247 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctca 20403344  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  20403345 attattcacatataattcaagtaatgcata 20403374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 22001773 - 22001900
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  22001773 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctca 22001870  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  22001871 attattcacatataattcaagtaatgcata 22001900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 4483301 - 4483427
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  4483301 gaccgactcatgcagcttagttaa-taac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctca 4483397  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  4483398 attattcacatataattcaagtaatgcata 4483427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 41598208 - 41598335
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||| | |||| |||||||||| | | |||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  41598208 gaccgactcatgcagcttagttgaataac-aacagcaacaca-gtagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctca 41598305  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  41598306 attattcacatataattcaagtaatgcata 41598335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 15203370 - 15203297
Alignment:
Q  4 cgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaa 76  Q
    ||||||||||||||||||||| |||| |||||||||| |  ||||||||   |||| |||||||||||||||||||    
T  15203370 cgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaa 15203297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 21249407 - 21249483
Alignment:
Q  1 gaccgactcatgcagcttagtt-aattaacaaacagcaacataggcagtatacaa--caacatgacataataatatc 74  Q
    |||||||||||||||||||||| ||| || ||| ||||||||| ||||||| |||  || ||||| |||||||||||    
T  21249407 gaccgactcatgcagcttagttaaataaaaaaatagcaacataagcagtatgcaattcatcatgatataataatatc 21249483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 21255245 - 21255321
Alignment:
Q  1 gaccgactcatgcagcttagtt-aattaacaaacagcaacataggcagtatacaa--caacatgacataataatatc 74  Q
    |||||||||||||||||||||| ||| || ||| ||||||||| ||||||| |||  || ||||| |||||||||||    
T  21255245 gaccgactcatgcagcttagttaaataaaaaaatagcaacataagcagtatgcaattcatcatgatataataatatc 21255321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 21673727 - 21673772
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggca 46  Q
    |||||||||||||| | ||||||| ||||||||| |||||||||||    
T  21673727 gaccgactcatgcatcatagttaaataacaaacaacaacataggca 21673772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 15070578 - 15070654
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaa 76  Q
    |||||||||||||||||||||||| |||| |||||| ||| | | |||||||   |||| |||||||||||||||||||    
T  15070578 gaccgactcatgcagcttagttaaataac-aacagcgacaca-gtagtatacaaaaacagcatgacataataatatcaa 15070654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 22525581 - 22525628
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagta 49  Q
    ||||||||||||||||||||||||| ||| |||| |||| |||||||||    
T  22525581 gaccgactcatgcagcttagttaataaac-aacaacaacttaggcagta 22525628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 45290837 - 45290761
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaa 76  Q
    |||||||||||||||||||||||| |||| |||||| ||| |  ||||||||   |||| |||||||||||||||||||    
T  45290837 gaccgactcatgcagcttagttaaataac-aacagcgacaca-acagtatacaaaaacagcatgacataataatatcaa 45290761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 173; Significance: 4e-93; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 32090 - 32325
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa-caacatgacataataatatcaatttcaattcatcaacatcttatg 99  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| |    
T  32090 gaccgactcatgcagcttagttaaataacaa-cagcaacataggcagtaaacaaacaacatgacataataatatcaatttcaattcatcaacatcttagg 32188  T
Q  100 tatacaaatattcttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcat 199  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| |  |    
T  32189 tatacaaatattcttcaagtaatgcataaacattatatcacatcataatcaacaacgacatatcttatacagcttcacagattataattaacctcattgt 32288  T
Q  200 taagtcttaatgctgcccaaaggttcaactctcgaca 236  Q
    ||||||||||| || ||||| ||||||||||||||||    
T  32289 taagtcttaatcctacccaagggttcaactctcgaca 32325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 172; Significance: 1e-92; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 1147 - 912
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaacatgacataataatatcaatttcaattcatcaacatcttatgt 100  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  1147 gaccgactcatgcagcttagttaattaataaacatcaacataggcagtatacaacatcatgacataattatatcaatttcaattcatcaacatcttatgt 1048  T
Q  101 atacaaatattcttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcatt 200  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||| |  ||    
T  1047 atacaaatattcttcaagtaatgcataaacattataacacatcataatcaacaacaacatattttatacagcttcacagattatagttaacctcattctt 948  T
Q  201 aagtcttaatgctgcccaaaggttcaactctcgaca 236  Q
    ||| |||||| || ||||| ||||||||||||||||    
T  947 aagacttaatcctacccaagggttcaactctcgaca 912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 172; Significance: 1e-92; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 20309131 - 20309366
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaacatgacataataatatcaatttcaattcatcaacatcttatgt 100  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||    
T  20309131 gaccgactcatgcagcttagttaaataacaaatagcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgt 20309230  T
Q  101 atacaaatattcttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcatt 200  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||| |  ||    
T  20309231 atacaaatattcttcaagtaatgcataaacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctt 20309330  T
Q  201 aagtcttaatgctgcccaaaggttcaactctcgaca 236  Q
    |||||||||| || ||||| ||||||||||||||||    
T  20309331 aagtcttaatcctacccaagggttcaactctcgaca 20309366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 38212 - 37976
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatcttat 98  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||  || ||||||||||||||||||||||| |||||||| ||||||||    
T  38212 gaccgactcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaacagcatgacataataatatcaatttcgattcatcatcatcttat 38114  T
Q  99 gtatacaaatattcttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttca 198  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||| |      
T  38113 gtatacaaacattcttcaagtaatgcataaacattatatcacatcataatcaacaacaacatgtcttatacagcttcagagattataattaacctcattg 38014  T
Q  199 ttaagtcttaatgctgcccaaaggttcaactctcgaca 236  Q
    |||||||||||| || ||||||||||||||||||||||    
T  38013 ttaagtcttaatcctacccaaaggttcaactctcgaca 37976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 23285888 - 23286118
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaacatgacataataatatcaatttcaattcatcaacatcttatgt 100  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||||||||  |    
T  23285888 gaccgactcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaaca-gacataataatatcaattgcaattcatcaacatcttaaat 23285985  T
Q  101 atacaaatattcttcaagtaatgcataat-cattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcat 199  Q
    || ||||| |||||||||||||||||||  ||||||||||||||||||||| |||||||| |||||| |||||||||||||||||||||||| |||||||    
T  23285986 attcaaatgttcttcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacagattataattaacatcttcat 23286085  T
Q  200 taagtcttaatgctgcccaaaggttcaactctc 232  Q
    ||||||||||| || ||||||||||||||||||    
T  23286086 taagtcttaatactacccaaaggttcaactctc 23286118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 23654484 - 23654246
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa---caacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||||| || || ||||||||| ||||||   || ||||||||||||||||||||| ||||||||||||||||||    
T  23654484 gaccgactcatgcagcttagttaaataacaa-caacagcataggcagcatacaaatacatcatgacataataatatcaattgcaattcatcaacatctta 23654386  T
Q  98 tgtatacaaatattcttcaagtaatgcataat-cattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctctt 196  Q
      ||| ||| ||||  |||||||||||||||  ||||||||||||||||||| | |||||||| |||||| |||||||||||||||||||||||||||||    
T  23654385 aatattcaagtattactcaagtaatgcataaaacattatatcacatcataattaacaacaacacatcttaaacagcttcacagattataattaacctctt 23654286  T
Q  197 cattaagtcttaatgctgcccaaaggttcaactctcgaca 236  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  23654285 cattaagtcttaatgctacccaaaggttcaactctcgaca 23654246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 298913 - 298686
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa---caacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||   || ||||||||||  ||||||||| ||||||| ||||||||||    
T  298913 gaccgactcatgcagcttagttaaataacaaacagcaacataggcagtatacaaaatcagcatgacataaatatatcaattgcaattcaacaacatctta 298814  T
Q  98 tgtatacaaatattcttcaagtaatgcataat-cattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctctt 196  Q
      ||| |||||| |  |||||||||||||||  ||||||||||||||||||| |  ||||||| |||||||||||||||||| |||||| ||||||||||    
T  298813 aatattcaaataattctcaagtaatgcataaaacattatatcacatcataattaataacaacacatcttatacagcttcacatattatagttaacctctt 298714  T
Q  197 cattaagtcttaatgctgcccaaaggtt 224  Q
    ||||||||||||||||| ||||||||||    
T  298713 cattaagtcttaatgctacccaaaggtt 298686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 22731332 - 22731120
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||| ||||| ||||   ||||||||||||||||||| |||||||||||||| |||    
T  22731332 gaccgactcatgcagcttagttaaataacaa-cagcaacataggcagtttacaaaaacagcatgacataataatatcaattgcaattcatcaacatatta 22731234  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctctt 196  Q
      ||| |||||||||||||||||||||| | | ||||||||||||||||||||| || ||||| |||||| |||||||||||||||||||||||| || |    
T  22731233 aatattcaaatattcttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacatcct 22731134  T
Q  197 cattaagtcttaat 210  Q
    ||||||||||||||    
T  22731133 cattaagtcttaat 22731120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 22738277 - 22738044
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||||| ||  || ||||||||| ||||| ||||   ||||||||||||||||||| ||||||||||||||||||    
T  22738277 gaccgactcatgcagcttagttaaataacaa-cattaa-ataggcagtttacaaaaacagcatgacataataatatcaattgcaattcatcaacatctta 22738180  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctctt 196  Q
      ||| |||||||||||||||||||||| | | ||||||||||||||||||||| || ||||| |||||| |||||||||||||||||||||||| || |    
T  22738179 aatattcaaatattcttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacatcct 22738080  T
Q  197 cattaagtcttaatgctgcccaaaggttcaactctc 232  Q
    |||||||||||||| || ||| ||||||||| ||||    
T  22738079 cattaagtcttaatactaccccaaggttcaattctc 22738044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 23060536 - 23060742
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa---caacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||   |||||||||||||||||||||||| ||| ||| ||||||||||    
T  23060536 gaccgactcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacaacatgacataataatatcaattgcaagtcaacaacatctta 23060634  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctctt 196  Q
      |||  || ||| |||||||||||||| | | ||||||||||||||||||||| || ||||| |||||| ||||||||||| |||||||||||| || |    
T  23060635 aatattaaattatacttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcaca-attataattaacatcat 23060733  T
Q  197 cattaagtc 205  Q
    |||||||||    
T  23060734 cattaagtc 23060742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 23076465 - 23076699
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||   ||||||||||||||||||| ||| ||| ||| ||||||    
T  23076465 gaccgactcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcaacaatatctta 23076563  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctctt 196  Q
      ||| ||| ||| |||||||||||||| | | ||||||||||||||||||||| || ||||| | |||| |||||||||||||||||||||||| || |    
T  23076564 aatattcaattatacttcaagtaatgcacataacattatatcacatcataatcaacatcaacacagcttaaacagcttcacagattataattaacatcat 23076663  T
Q  197 cattaagtcttaatgctgcccaaaggttcaactctc 232  Q
    ||| || ||  ||| || ||| || |||||||||||    
T  23076664 cataaaatcccaatactaccccaaagttcaactctc 23076699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 22337138 - 22337372
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||||| |||||||| |||| ||||| || ||||   ||||||||||||||||| | |||  || |||||||| |    
T  22337138 gaccgactcatgcagcttagttaaataacaa-cagcaacacaggctgtatataaaaacagcatgacataataatatcaaatgcaagacaacaacatctca 22337236  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctctt 196  Q
      ||||||   ||  |||||||||||| || | ||||||||||||||||||||| || |||||||||||| ||| ||||||| |||||||||||| || |    
T  22337237 aatatacattcataattcaagtaatgcgtataacattatatcacatcataatcaacatcaacatatcttaaacaacttcacaaattataattaacatcat 22337336  T
Q  197 cattaagtcttaatgctgcccaaaggttcaactctc 232  Q
    |||||||||||||| || | | ||||||||||||||    
T  22337337 cattaagtcttaatactactccaaggttcaactctc 22337372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 23660046 - 23660279
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac--aacaacatgacataataatatcaatttcaattcatcaacatcttat 98  Q
    |||||||||||| | |||||||||  ||||| ||||||||||||||||||||  ||||  |||||||||||||||||| | ||| ||| ||||||||||     
T  23660046 gaccgactcatgtatcttagttaaacaacaa-cagcaacataggcagtatacgaaacaggatgacataataatatcaaatgcaaatcaacaacatcttaa 23660144  T
Q  99 gtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttc 197  Q
     ||| |||  ||   ||||||||||| || | ||||||||||||||||||||| || ||||| |||||| ||||||| ||| |||||||||||| || ||    
T  23660145 atattcaatcataactcaagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaacagctttacaaattataattaacatcatc 23660244  T
Q  198 attaagtcttaatgctgcccaaaggttcaactctc 232  Q
    | ||||||| ||| || ||| ||||||||||||||    
T  23660245 aataagtctcaatactaccccaaggttcaactctc 23660279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 128 - 236
Target Start/End: Original strand, 27753728 - 27753836
Alignment:
Q  128 atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaatgctgcccaaaggttcaa 227  Q
    ||||||||||||||||||||||| || ||||| |||||| |||| |||||| |||||||||||| || ||||||||||||||||||  || ||| |||||    
T  27753728 atcattatatcacatcataatcaacatcaacacatcttaaacagtttcacatattataattaacatcatcattaagtcttaatgctatcccaagcttcaa 27753827  T
Q  228 ctctcgaca 236  Q
    |||||||||    
T  27753828 ctctcgaca 27753836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 23103493 - 23103399
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa-caacatgacataataatatcaatttcaattcatcaacatct 95  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||||||| || |||||||| || ||||||| ||||||||||||||||||    
T  23103493 gaccgactcatgcagcttagttaaataa-aaacagcaacataggcagtatacaaacagcatgacatgattatatcaaattcaattcatcaacatct 23103399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 23708717 - 23708524
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat--acaacaacatgacataataatatcaatttcaattcatcaacatcttat 98  Q
    |||||||||| ||||||||||||| ||||| | |||||||||||||||||  | |||||||||| |||| |||||||||| ||| ||||| |||||| |     
T  23708717 gaccgactcaagcagcttagttaaataacagatagcaacataggcagtatgcaaaacaacatgatataacaatatcaattgcaaatcatcgacatctcaa 23708618  T
Q  99 gtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttat-acagcttcacagattataattaa 190  Q
      || |||||||  ||||||||||||||| |  |||||||||||| |||| || || |||   ||||||| |||||||||||||| || |||||    
T  23708617 acattcaaatataattcaagtaatgcatatacaattatatcacattataaacaacatcaattcatcttataacagcttcacagatcatcattaa 23708524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 64 - 182
Target Start/End: Complemental strand, 40622244 - 40622123
Alignment:
Q  64 ataataatatcaatttcaattcatcaacatcttatgtataca-----aatattcttcaagtaatgcataatcattatatcacatcataatcatcaacaac 158  Q
    ||||| ||||||||| ||||||||||||||||||||||||||     ||||||||||||||||||||||| |||||||  |||||||||||| ||  |||    
T  40622244 ataattatatcaatt-caattcatcaacatcttatgtatacagtacaaatattcttcaagtaatgcataaacattataatacatcataatcaacacaaac 40622146  T
Q  159 atatcttatacagcttcacagatt 182  Q
    || || || |||||||||||||||    
T  40622145 atctcata-acagcttcacagatt 40622123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 8 - 95
Target Start/End: Complemental strand, 7824 - 7735
Alignment:
Q  8 tcatgcagcttagttaattaacaaacagcaacataggcagtat--acaacaacatgacataataatatcaatttcaattcatcaacatct 95  Q
    |||||||||||||||||| ||||||||||||||||||||||||  | |||||||||| |||| |||||||| | ||| ||||||||||||    
T  7824 tcatgcagcttagttaataaacaaacagcaacataggcagtatgcaaaacaacatgatataacaatatcaaatgcaagtcatcaacatct 7735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 22105432 - 22105560
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat---acaacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||   | |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  22105432 gaccgactcatgcagcttagttaaataac-aacagcaacataggcagtatgcaaaaacagcatgacataataatatcaaatgcaagtcaacaacttctca 22105530  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  22105531 attattcacatataattcaagtaatgcata 22105560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 23207300 - 23207350
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtata 51  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  23207300 gaccgactcatgcagcttagttaataaacaaacagcaacataggcagtata 23207350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 7679612 - 7679702
Alignment:
Q  5 gactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatc 94  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| |||  || ||||| |||| ||||||||| | || |||||||||||    
T  7679612 gactcatgcagcttagttaaataacaaacagcaacataggcagtatgcaaatcatcatgatataacaatatcaatgt-aagtcatcaacatc 7679702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 19671857 - 19671928
Alignment:
Q  5 gactcatgcagcttagttaattaacaaacagcaacataggcagtat--acaacaacatgacataataatatc 74  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||  | |||| ||||| |||||||||||    
T  19671857 gactcatgcagcttagttaattaacaatcagcaacataggcagtatgcaaaacatcatgatataataatatc 19671928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 28405999 - 28406048
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat 50  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  28405999 gaccgactcatgcaacttagttaaataacaaacagcaacataggcagtat 28406048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 20520291 - 20520243
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagta 49  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  20520291 gaccgactcatgcagcttagttaataaacaaacagcaacatatgcagta 20520243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 21155202 - 21155075
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||||| |||||||| |  |||||||||| ||||   ||||||||||||||||||| ||| ||| |||| ||| |    
T  21155202 gaccgactcatgcagcttagttaaataacaa-cagcaacacaa-cagtatacaaaaacagcatgacataataatatcaattgcaagtcaacaacgtctca 21155105  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  21155104 attattcacatataattcaagtaatgcata 21155075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 23004772 - 23004819
Alignment:
Q  2 accgactcatgcagcttagttaattaacaaacagcaacataggcagta 49  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||    
T  23004772 accgactcatgcagcttagttaataaacaaacagcaacataggtagta 23004819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 26505399 - 26505526
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaa---catgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| | ||||||||||| ||   ||||||||||||||||||| | ||| ||| |||| ||| |    
T  26505399 gaccgactcatgcagcttagttaaataac-aacagcaacaca-gcagtatacaaaaatagcatgacataataatatcaaatgcaagtcaacaacgtctca 26505496  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  26505497 attattcacatataattcaagtaatgcata 26505526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 26507877 - 26508004
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaa---catgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| | ||||||||||| ||   ||||||||||||||||||| | ||| ||| |||| ||| |    
T  26507877 gaccgactcatgcagcttagttaaataac-aacagcaacaca-gcagtatacaaaaatagcatgacataataatatcaaatgcaagtcaacaacgtctca 26507974  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  26507975 attattcacatataattcaagtaatgcata 26508004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 22413236 - 22413186
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtata 51  Q
    |||||||||||||| |||||||||| |||||||| ||||||||||||||||    
T  22413236 gaccgactcatgcaacttagttaataaacaaacaacaacataggcagtata 22413186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 23072045 - 23071972
Alignment:
Q  3 ccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatatc 74  Q
    |||||||||||||||||||||| |||| |||| ||||||||||||||| |||  || ||||| |||||||||||    
T  23072045 ccgactcatgcagcttagttaaataacgaacaacaacataggcagtatgcaaaccatcatgatataataatatc 23071972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 50
Target Start/End: Original strand, 25175880 - 25175922
Alignment:
Q  8 tcatgcagcttagttaattaacaaacagcaacataggcagtat 50  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  25175880 tcatgcagcttagttaaataacaaacagcaacataggcagtat 25175922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 32215063 - 32214921
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||| ||||| | |||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  32215063 gaccgactcatgcagcttagttaaataac-aacaacaacaca-gcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctca 32214966  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcaca 141  Q
      ||| || ||||  ||||||||||||||| || |||||||||||    
T  32214965 attattcacatataattcaagtaatgcatatataattatatcaca 32214921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 23287386 - 23287433
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagta 49  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  23287386 gaccgactcatgcagcttagttaataaac-aacagcaacataggcagta 23287433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 25108910 - 25108958
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagta 49  Q
    |||||||||||| |||||||||||| |||||||| ||||||||||||||    
T  25108910 gaccgactcatgtagcttagttaataaacaaacaacaacataggcagta 25108958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 18808963 - 18809090
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  18808963 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctca 18809060  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  18809061 attattcacatataattcaagtaatgcata 18809090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 23130882 - 23131009
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  23130882 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctca 23130979  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  23130980 attattcacatataattcaagtaatgcata 23131009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 23133349 - 23133476
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  23133349 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctca 23133446  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  23133447 attattcacatataattcaagtaatgcata 23133476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 23135610 - 23135737
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  23135610 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctca 23135707  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  23135708 attattcacatataattcaagtaatgcata 23135737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 23709674 - 23709547
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  23709674 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctca 23709577  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  23709576 attattcacatataattcaagtaatgcata 23709547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 23712155 - 23712028
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  23712155 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctca 23712058  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  23712057 attattcacatataattcaagtaatgcata 23712028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 24367794 - 24367921
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  24367794 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctca 24367891  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  24367892 attattcacatataattcaagtaatgcata 24367921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 26392405 - 26392451
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagt 48  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  26392405 gaccgactcatgcagcttagttaataaac-aacagcaacataggcagt 26392451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 34402664 - 34402537
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  34402664 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctca 34402567  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  34402566 attattcacatataattcaagtaatgcata 34402537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 39682333 - 39682460
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  39682333 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctca 39682430  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  39682431 attattcacatataattcaagtaatgcata 39682460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 8946680 - 8946732
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa 54  Q
    |||||||||||||||||||||||  |||| || |||||||||||||||||||||    
T  8946680 gaccgactcatgcagcttagttagataac-aatagcaacataggcagtatacaa 8946732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 18787001 - 18786952
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat 50  Q
    |||||||||||||||||||||||| |||||| ||| |||||||| |||||    
T  18787001 gaccgactcatgcagcttagttaaataacaatcagtaacataggtagtat 18786952  T

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Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 22134304 - 22134256
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat 50  Q
    |||||||||||||||||||||||| || | ||||||||||||||||||||    
T  22134304 gaccgactcatgcagcttagttaaatatc-aacagcaacataggcagtat 22134256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 32452027 - 32451948
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaa---catgacataataatatcaat 77  Q
    |||||||||||||||||| |||||  | ||||||||||||||||||| || ||| ||   |||||||||| |||||||||    
T  32452027 gaccgactcatgcagcttggttaaacatcaaacagcaacataggcagcattcaaaaatagcatgacataacaatatcaat 32451948  T

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Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 571417 - 571493
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaa 76  Q
    |||||||||||||||||||||||| |||| |||||||||| |  ||||||||   |||| |||||||||||||||||||    
T  571417 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaa 571493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 6726015 - 6726091
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaa 76  Q
    |||||||||||||||||||||||| |||| |||||||||| |  ||||||||   |||| |||||||||||||||||||    
T  6726015 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaa 6726091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 23791296 - 23791344
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagta 49  Q
    |||||||||||| |||||||||||| | |||||| ||||||||||||||    
T  23791296 gaccgactcatgtagcttagttaataagcaaacaacaacataggcagta 23791344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 97
Target Start/End: Complemental strand, 23019752 - 23019706
Alignment:
Q  51 acaacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    ||||||||||||| | ||||||||||||||| |||| ||||||||||    
T  23019752 acaacaacatgacttcataatatcaatttcatttcaacaacatctta 23019706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 23040287 - 23040247
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacata 42  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
T  23040287 gaccgactcatgcagcttagttaaataac-aacagcaacata 23040247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 24697705 - 24697657
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagta 49  Q
    |||||||||||||| | |||||||| |||||||| |||| |||||||||    
T  24697705 gaccgactcatgcaacatagttaataaacaaacaacaacgtaggcagta 24697657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 24898338 - 24898210
Alignment:
Q  1 gaccgactcatgcagctt-agttaattaacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatctt 96  Q
    |||||||||||||||||| |||||| |||||| |||||||| |  |||||||||| ||||   ||||||||||||||||| | ||| ||| |||| |||     
T  24898338 gaccgactcatgcagctttagttaaataacaa-cagcaacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctc 24898241  T
Q  97 atgtatacaaatattcttcaagtaatgcata 127  Q
    |  ||| || ||||  |||||||||||||||    
T  24898240 aattattcacatataattcaagtaatgcata 24898210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 24900821 - 24900693
Alignment:
Q  1 gaccgactcatgcagctt-agttaattaacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatctt 96  Q
    |||||||||||||||||| |||||| |||||| |||||||| |  |||||||||| ||||   ||||||||||||||||| | ||| ||| |||| |||     
T  24900821 gaccgactcatgcagctttagttaaataacaa-cagcaacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctc 24900724  T
Q  97 atgtatacaaatattcttcaagtaatgcata 127  Q
    |  ||| || ||||  |||||||||||||||    
T  24900723 aattattcacatataattcaagtaatgcata 24900693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 24903298 - 24903170
Alignment:
Q  1 gaccgactcatgcagctt-agttaattaacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatctt 96  Q
    |||||||||||||||||| |||||| |||||| |||||||| |  |||||||||| ||||   ||||||||||||||||| | ||| ||| |||| |||     
T  24903298 gaccgactcatgcagctttagttaaataacaa-cagcaacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctc 24903201  T
Q  97 atgtatacaaatattcttcaagtaatgcata 127  Q
    |  ||| || ||||  |||||||||||||||    
T  24903200 aattattcacatataattcaagtaatgcata 24903170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 24905775 - 24905647
Alignment:
Q  1 gaccgactcatgcagctt-agttaattaacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatctt 96  Q
    |||||||||||||||||| |||||| |||||| |||||||| |  |||||||||| ||||   ||||||||||||||||| | ||| ||| |||| |||     
T  24905775 gaccgactcatgcagctttagttaaataacaa-cagcaacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctc 24905678  T
Q  97 atgtatacaaatattcttcaagtaatgcata 127  Q
    |  ||| || ||||  |||||||||||||||    
T  24905677 aattattcacatataattcaagtaatgcata 24905647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 24908250 - 24908122
Alignment:
Q  1 gaccgactcatgcagctt-agttaattaacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatctt 96  Q
    |||||||||||||||||| |||||| |||||| |||||||| |  |||||||||| ||||   ||||||||||||||||| | ||| ||| |||| |||     
T  24908250 gaccgactcatgcagctttagttaaataacaa-cagcaacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctc 24908153  T
Q  97 atgtatacaaatattcttcaagtaatgcata 127  Q
    |  ||| || ||||  |||||||||||||||    
T  24908152 aattattcacatataattcaagtaatgcata 24908122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 167; Significance: 1e-89; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 13520 - 13756
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatcttat 98  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||  ||||||||||| |||||||||||||| |||||||||||||||||    
T  13520 gaccgactcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaacaacatgacatgataatatcaatttcgattcatcaacatcttat 13618  T
Q  99 gtatacaaatattcttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttca 198  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| |      
T  13619 gtatacaaacattcttcaagtaatgcataaacattatatcacatcataatcaacaacgacatatcttatacagcttcacagattataattaacctcattg 13718  T
Q  199 ttaagtcttaatgctgcccaaaggttcaactctcgaca 236  Q
    |||||||||||| || || |||||||||||||||||||    
T  13719 ttaagtcttaatcctaccgaaaggttcaactctcgaca 13756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 165; Significance: 2e-88; HSPs: 66)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 40443414 - 40443650
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa-caacatgacataataatatcaatttcaattcatcaacatcttatg 99  Q
    ||||||||| |||||||||||||| ||||||||||||||||| |||||| |||| || |||||||||||||||||||||||||||||||||||||||| |    
T  40443414 gaccgactcgtgcagcttagttaaataacaaacagcaacatacgcagtaaacaaacagcatgacataataatatcaatttcaattcatcaacatcttagg 40443513  T
Q  100 tatacaaatattcttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcat 199  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| |  |    
T  40443514 tatacaaatattcttcaagtaatgcataaacattatatcacatcataatcaacaacgacatatcttatacagcttcacagattataattaacctcattgt 40443613  T
Q  200 taagtcttaatgctgcccaaaggttcaactctcgaca 236  Q
    ||||||||||| || ||||| |||||| |||||||||    
T  40443614 taagtcttaatcctacccaagggttcatctctcgaca 40443650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 27847928 - 27847693
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaacatgacataataatatcaatttcaattcatcaacatcttatgt 100  Q
    |||||| ||||||||||||||||| ||| ||||||||||||||||||| |||||||  |||||||||| ||||||| |||||||||||||||||||||||    
T  27847928 gaccgattcatgcagcttagttaaataataaacagcaacataggcagtgtacaacagtatgacataattatatcaaattcaattcatcaacatcttatgt 27847829  T
Q  101 atacaaatattcttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcatt 200  Q
    ||||||| |||||||||||||||||||| ||||||  ||||||||||||| |||||||||||||||| ||||||||||||||||| |||| ||| | |||    
T  27847828 atacaaacattcttcaagtaatgcataaacattatcacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaatctcattatt 27847729  T
Q  201 aagtcttaatgctgcccaaaggttcaactctcgaca 236  Q
    |||||||||| || ||||| ||||||||||||||||    
T  27847728 aagtcttaatcctacccaagggttcaactctcgaca 27847693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 9509212 - 9509450
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||||| ||| |||||||||||||||||| ||||   ||||||||||||||||||| ||||||||||||||||||    
T  9509212 gaccgactcatgcagcttagttaaataacaa-cagtaacataggcagtatacaataacagcatgacataataatatcaattgcaattcatcaacatctta 9509310  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctctt 196  Q
      ||| |||||||||||||||||||||| | | || |||||||||||||||||| || ||||| |||||| |||||||||||||||||||||||| || |    
T  9509311 aatattcaaatattcttcaagtaatgcacataacactatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacatcct 9509410  T
Q  197 cattaagtcttaatgctgcccaaaggttcaactctcgaca 236  Q
    |||||||||||||||||  || ||||||||||||||||||    
T  9509411 cattaagtcttaatgctatcccaaggttcaactctcgaca 9509450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 12698854 - 12699093
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa----caacatgacataataatatcaatttcaattcatcaacatctt 96  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||    || ||||||||||||||||||||| |||||||||||||||||    
T  12698854 gaccgactcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaacacagcatgacataataatatcaattgcaattcatcaacatctt 12698952  T
Q  97 atgtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctct 195  Q
    |  ||| |||||||||||||||||||||| | | ||||||||||||||||||||| || ||||| |||||| |||||||||||||||||||||||| ||     
T  12698953 aaatattcaaatattcttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacatcc 12699052  T
Q  196 tcattaagtcttaatgctgcccaaaggttcaactctcgaca 236  Q
    ||||||| ||||||| || ||| ||||||||||| ||||||    
T  12699053 tcattaactcttaatactaccccaaggttcaactatcgaca 12699093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 4 - 236
Target Start/End: Original strand, 10589065 - 10589299
Alignment:
Q  4 cgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa---caacatgacataataatatcaatttcaattcatcaacatcttatgt 100  Q
    ||||||||||||||||||||| |||||| |||||||||| |||||||||||   |||||||||||||| ||||||||| ||||||| |||||||||   |    
T  10589065 cgactcatgcagcttagttaaataacaa-cagcaacatatgcagtatacaaaaacaacatgacataatcatatcaattgcaattcaacaacatcttcaat 10589163  T
Q  101 atacaaatattcttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcatt 200  Q
     | ||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||| |||||| | ||||||||||||||||||||||||| |||||    
T  10589164 gttcaaatattcttcaagcaatgcataaacattatatcacatcataatcagcaacaacacatcttaaatagcttcacagattataattaacctcatcatt 10589263  T
Q  201 aagtcttaatgctgcccaaaggttcaactctcgaca 236  Q
    |||||||||| || ||||||||| ||||||| ||||    
T  10589264 aagtcttaatcctacccaaaggtccaactctagaca 10589299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 26212019 - 26212245
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa---caacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    ||||||||||| || ||||||||| |||||| ||||||||||||||||||||||   || ||||||||||||||||||||| ||||||| ||||||||||    
T  26212019 gaccgactcatacaacttagttaaataacaa-cagcaacataggcagtatacaaaatcagcatgacataataatatcaattgcaattcaacaacatctta 26212117  T
Q  98 tgtatacaaatattcttcaagtaatgcataat-cattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctctt 196  Q
      ||| |||||| |  |||||||||||||||  ||||||||||||| ||||||| |||||||| |||||| |||||||||||||||||||||||||||||    
T  26212118 aatattcaaataattctcaagtaatgcataaaacattatatcacattataatcaacaacaacacatcttaaacagcttcacagattataattaacctctt 26212217  T
Q  197 cattaagtcttaatgctgcccaaaggtt 224  Q
    ||||||||||||||||| ||||||||||    
T  26212218 cattaagtcttaatgctacccaaaggtt 26212245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 16386346 - 16386107
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa---caacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| ||||||||| | |||||||||||||||||   || ||||||||||  |||||||||  | |||||||||||||||    
T  16386346 gaccgactcatgcagcttagttaaataacaaacaacgacataggcagtatacaaaatcagcatgacataaatatatcaattgtatttcatcaacatctta 16386247  T
Q  98 tgtatacaaatattcttcaagtaatgcataat-cattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctctt 196  Q
      ||| |||| | |  |||||||||||||||  |||||||| |||||||||||| |||||||| |||||| |||||||||||||||||| ||||||||||    
T  16386246 aatattcaaacaattctcaagtaatgcataaaacattatattacatcataatcaacaacaacacatcttaaacagcttcacagattatagttaacctctt 16386147  T
Q  197 cattaagtcttaatgctgcccaaaggttcaactctcgaca 236  Q
    ||||||||||||||| | ||||||||||||||||| ||||    
T  16386146 cattaagtcttaatgttacccaaaggttcaactctggaca 16386107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 38227504 - 38227736
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatcttat 98  Q
    |||||||||||||||||||||||| ||||||  |||||||||||||||||||||  || ||||||||||||||||||| | ||| ||| ||||||||||     
T  38227504 gaccgactcatgcagcttagttaaataacaat-agcaacataggcagtatacaaaacagcatgacataataatatcaaatgcaagtcaacaacatcttaa 38227602  T
Q  99 gtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttc 197  Q
     ||| ||| ||| |||||| ||||| | | |||||||||||||||| |||||| || |||||||||||| | | ||||||| |||||||||||| || ||    
T  38227603 atattcaattatacttcaattaatgtacatatcattatatcacatcttaatcaacatcaacatatcttaaatatcttcacatattataattaacatcatc 38227702  T
Q  198 attaagtcttaatgctgcccaaaggttcaactct 231  Q
    ||||||||||||| || ||| |||||||||||||    
T  38227703 attaagtcttaatactaccccaaggttcaactct 38227736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 18456510 - 18456319
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatcttat 98  Q
    |||||||||||||||||||||||| |||| |  |||||||||||||||||||||  |||||||||||||||||||||| | ||| ||| ||||||||||     
T  18456510 gaccgactcatgcagcttagttaaataacgat-agcaacataggcagtatacaaaacaacatgacataataatatcaaatgcaagtcaacaacatcttaa 18456412  T
Q  99 gtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaa 190  Q
     ||| ||| ||| |||||||||||||| | | ||||||||||||||||||||| || ||||| |||||| |||||||||||||||||||||||    
T  18456411 atattcaattatacttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaa 18456319  T

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Target: chr7; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 3564462 - 3564229
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||   |||||||||||||||||||||||| |  || ||| |||||||| |    
T  3564462 gaccgactcatgcagcttagttaaataac-aacagcaacataggcagtatacaaaaacaacatgacataataatatcaaatgtaagtcaacaacatctca 3564364  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctctt 196  Q
      ||||||   ||  |||||||||||| || | ||||| ||||||||||||||| || ||||| |||||| ||| ||||| || ||||||||||| || |    
T  3564363 attatacattcataattcaagtaatgcgtataacattagatcacatcataatcaacatcaacacatcttaaacaacttcataggttataattaacatcat 3564264  T
Q  197 cattaagtcttaatgctgcccaaaggttcaactct 231  Q
    |||||||||| ||| || ||| |||||| ||||||    
T  3564263 cattaagtctcaatactaccccaaggttaaactct 3564229  T

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Target: chr7; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 78 - 182
Target Start/End: Original strand, 12187115 - 12187218
Alignment:
Q  78 ttcaattcatcaacatcttatgtatacaaatattcttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcac 177  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||| |||||||  |||||||| ||| |   ||||| |||||| |||||||||    
T  12187115 ttcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcatattcaactcaaacatctcttat-cagcttcac 12187213  T
Q  178 agatt 182  Q
    |||||    
T  12187214 agatt 12187218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 16213704 - 16213852
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa---caacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||||| |||||||| || ||||||||||   |||||||||||||||||||||| | ||| ||| |||| |||||    
T  16213704 gaccgactcatgcagcttagttaaataacaa-cagcaacacag-cagtatacaaaaacaacatgacataataatatcaaatccaagtcaacaacgtctta 16213801  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcacatcataa 147  Q
      ||| || ||||  ||||||||||||||| || ||||||||||| |||||    
T  16213802 attattcacatataattcaagtaatgcatatataattatatcacaacataa 16213852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 78 - 182
Target Start/End: Complemental strand, 17138081 - 17137978
Alignment:
Q  78 ttcaattcatcaacatcttatgtatacaaatattcttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcac 177  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||| |||||||  |||||||| ||| ||  ||||| || ||| |||||||||    
T  17138081 ttcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcatattcaacacaaacatctcatat-cagcttcac 17137983  T
Q  178 agatt 182  Q
    |||||    
T  17137982 agatt 17137978  T

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Target: chr7; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 2280217 - 2280121
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat--acaacaacatgacataataatatcaatttcaattcatcaacatct 95  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||||  | |||| ||||| ||||||||||||| | ||| ||| ||||||||    
T  2280217 gaccgactcatgcagcttagttaataaacaaacaacaacataggcagtatgcaaaacagcatgatataataatatcaaatgcaaatcaacaacatct 2280121  T

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Target: chr7; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 28505396 - 28505321
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatatc 74  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| |||  || ||||| |||||||||||    
T  28505396 gaccgactcatgcagcttagttaaataacaaacagcaacataggcagtatgcaaaccatcatgatataataatatc 28505321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 34200809 - 34200884
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatatc 74  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| |||  || ||||| |||||||||||    
T  34200809 gaccgactcatgcagcttagttaaataacaaacagcaacataggcagtatgcaaaccatcatgatataataatatc 34200884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 13647348 - 13647476
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat---acaacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||   | |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  13647348 gaccgactcatgcagcttagttaaataac-aacagcaacataggcagtatgcaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctca 13647446  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  13647447 attattcacatataattcaagtaatgcata 13647476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 96
Target Start/End: Complemental strand, 2530205 - 2530139
Alignment:
Q  31 aacagcaacataggcagtatacaa-caacatgacataataatatcaatttcaattcatcaacatctt 96  Q
    ||||||||||||||||  |||||| |||||||||||||||||||||||||||||||| |||||||||    
T  2530205 aacagcaacataggcaacatacaaacaacatgacataataatatcaatttcaattcaacaacatctt 2530139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 67768 - 67817
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat 50  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  67768 gaccgactcatgcagcttagttaaataacaaacagcaacataggcagtat 67817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 12901347 - 12901399
Alignment:
Q  2 accgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa 54  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  12901347 accgactcatgcagcttagttaataaacaaacaacaacataggcagtatacaa 12901399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 16495425 - 16495500
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatatc 74  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||| |||  || ||||| |||||||||||    
T  16495425 gaccgactcatgcagcttagttaaataacaaacaacaacataggcagtatgcaaaccatcatgatataataatatc 16495500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 11996125 - 11996051
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatat 73  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||||| |||  || ||||| ||||||||||    
T  11996125 gaccgactcatgcatcttagttaattaacaaacaacaacataggcagtatgcaaaccatcatgatataataatat 11996051  T

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Target: chr7; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 16219815 - 16219717
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||| ||||||||||| ||||||||| ||||||||||||||| |||  || ||||| |||| |||||| | | ||| ||||||||||||||    
T  16219815 gaccgactcatgtagcttagttaaataacaaacaacaacataggcagtatgcaaatcatcatgatataacaatatcgaatgcaagtcatcaacatctta 16219717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 48273412 - 48273508
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatct 95  Q
    |||||||| ||||||||||||||| |||| |||||||||| |||||||||||   |||| ||||||||||||||||||| | ||| ||| ||||||||    
T  48273412 gaccgacttatgcagcttagttaaataac-aacagcaacacaggcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacatct 48273508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 24704708 - 24704832
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaacatgacataataatatcaatttcaattcatcaacatcttatgt 100  Q
    |||||||||||||||||||||||| |||| |||||||||| |  |||||||||| |||| |||||||||||||||| | ||| ||| |||| ||| |  |    
T  24704708 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacaagacataataatatcaaatgcaagtcaacaacgtctcaatt 24704805  T
Q  101 atacaaatattcttcaagtaatgcata 127  Q
    || || ||||  |||||||||||||||    
T  24704806 attcacatataattcaagtaatgcata 24704832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 811229 - 811180
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat 50  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  811229 gaccgactcatgcagcttagttaaataacaaatagcaacataggcagtat 811180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 18005669 - 18005718
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat 50  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  18005669 gaccgactcatgcagcttagttaaataacaaacagcaacataagcagtat 18005718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 44014201 - 44014250
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat 50  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  44014201 gaccgactcatgcagcttagttaaataacaaacaacaacataggcagtat 44014250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 10063912 - 10063841
Alignment:
Q  5 gactcatgcagcttagttaattaacaaacagcaacataggcagtat--acaacaacatgacataataatatc 74  Q
    |||||||||| |||||||||||||||| ||||||||||||| ||||  |||||| ||||| |||||||||||    
T  10063912 gactcatgcaacttagttaattaacaatcagcaacataggcggtatgcacaacatcatgatataataatatc 10063841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 14044769 - 14044817
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagta 49  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  14044769 gaccgactcatgcagcttagttaataaacaaaaagcaacataggcagta 14044817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 14354799 - 14354847
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagta 49  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  14354799 gaccgactcatgcagcttagttaataaacaaaaagcaacataggcagta 14354847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 14036282 - 14036325
Alignment:
Q  6 actcatgcagcttagttaattaacaaacagcaacataggcagta 49  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  14036282 actcatgcagcttagttaataaacaaacagcaacataggcagta 14036325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 14346312 - 14346355
Alignment:
Q  6 actcatgcagcttagttaattaacaaacagcaacataggcagta 49  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  14346312 actcatgcagcttagttaataaacaaacagcaacataggcagta 14346355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 16056351 - 16056446
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac-aacaacatgacataataatatcaatttcaattcatcaacatct 95  Q
    |||||||| ||||| ||||||||| |||||||||||||||||| || ||| | |||||||||| |||| |||||||| | ||| ||| ||||||||    
T  16056351 gaccgactgatgcaccttagttaaataacaaacagcaacatagacattatgcaaacaacatgatataacaatatcaaatgcaaatcaacaacatct 16056446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 24275191 - 24275318
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| | |||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  24275191 gaccgactcatgcagcttagttaaataac-aacagcaacaca-gcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctca 24275288  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  24275289 attattcacatataattcaagtaatgcata 24275318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 24702258 - 24702385
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| |  ||||||||   |||||||||||||||||||||||| | ||| ||| |||| ||| |    
T  24702258 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacaacatgacataataatatcaaatgcaagtcaacaacgtctca 24702355  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  24702356 attattcacatataattcaagtaatgcata 24702385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 48991206 - 48991253
Alignment:
Q  4 cgactcatgcagcttagttaattaacaaacagcaacataggcagtata 51  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||    
T  48991206 cgactcatgcagcttagttaataaacaaacaacaacataggcagtata 48991253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 1868093 - 1868043
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtata 51  Q
    ||||||||||||||||||||||||| ||| |||| ||||||||||||||||    
T  1868093 gaccgactcatgcagcttagttaataaactaacaacaacataggcagtata 1868043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 15008597 - 15008547
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtata 51  Q
    ||||||||||||||||||||||||| |||||||| ||||||||| ||||||    
T  15008597 gaccgactcatgcagcttagttaataaacaaacaacaacataggtagtata 15008547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 47831830 - 47831879
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat 50  Q
    |||||||||||||||||||||||| ||||||||| |||||||| ||||||    
T  47831830 gaccgactcatgcagcttagttaaataacaaacaacaacatagacagtat 47831879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 19486842 - 19486767
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat--acaacaacatgacataataatatc 74  Q
    ||||||||||||||||||||||| ||||  | ||||||||||||||||||  | |||| ||||| |||||||||||    
T  19486842 gaccgactcatgcagcttagttagttaatgatcagcaacataggcagtatgcaaaacatcatgatataataatatc 19486767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 20220286 - 20220238
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagta 49  Q
    ||||||||||| ||||||||||||| |||||||| ||||||||||||||    
T  20220286 gaccgactcatacagcttagttaataaacaaacaacaacataggcagta 20220238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 44116529 - 44116605
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa---caacatgacataataatatcaa 76  Q
    |||||||||||||||||| ||||| |||||| |||||||| || ||||||||||   ||||||||||||||||||||||    
T  44116529 gaccgactcatgcagcttggttaaataacaa-cagcaacacag-cagtatacaaaaacaacatgacataataatatcaa 44116605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 456341 - 456468
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  456341 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctca 456438  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  456439 attattcacatataattcaagtaatgcata 456468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 11393429 - 11393302
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  11393429 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctca 11393332  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  11393331 attattcacatataattcaagtaatgcata 11393302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 11972516 - 11972643
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  11972516 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctca 11972613  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  11972614 attattcacatataattcaagtaatgcata 11972643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 14949264 - 14949137
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  14949264 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctca 14949167  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  14949166 attattcacatataattcaagtaatgcata 14949137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 15376855 - 15376728
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  15376855 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctca 15376758  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  15376757 attattcacatataattcaagtaatgcata 15376728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 16232540 - 16232667
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  16232540 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctca 16232637  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  16232638 attattcacatataattcaagtaatgcata 16232667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 18430732 - 18430859
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat---acaacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| |  ||||||   | |||| ||||||||||||||||||| | ||| ||| |||||||| |    
T  18430732 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatataaaaacatcatgacataataatatcaaatgcaagtcaacaacatctca 18430829  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  18430830 attattcacatataattcaagtaatgcata 18430859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 18640292 - 18640419
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  18640292 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctca 18640389  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  18640390 attattcacatataattcaagtaatgcata 18640419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 20385265 - 20385138
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  20385265 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctca 20385168  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  20385167 attattcacatataattcaagtaatgcata 20385138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 21189737 - 21189610
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  21189737 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctca 21189640  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  21189639 attattcacatataattcaagtaatgcata 21189610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 32125511 - 32125638
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  32125511 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctca 32125608  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  32125609 attattcacatataattcaagtaatgcata 32125638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 41522937 - 41523064
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  41522937 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctca 41523034  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  41523035 attattcacatataattcaagtaatgcata 41523064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 41525399 - 41525526
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  41525399 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctca 41525496  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  41525497 attattcacatataattcaagtaatgcata 41525526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 17062057 - 17061981
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac--aacaacatgacataataatatcaa 76  Q
    |||||||||||||||||||||||| |||||| ||||||| |  |||||||||  || | |||||||||||||||||||    
T  17062057 gaccgactcatgcagcttagttaaataacaatcagcaac-tcagcagtatacaaaatagcatgacataataatatcaa 17061981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 12255887 - 12255842
Alignment:
Q  5 gactcatgcagcttagttaattaacaaacagcaacataggcagtat 50  Q
    |||||||||||||||||||| ||||||||| |||||||| ||||||    
T  12255887 gactcatgcagcttagttaaataacaaacaacaacatagtcagtat 12255842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 16410079 - 16410155
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaa 76  Q
    |||||||||||||||||||||||| |||| |||||||||| |  ||||||||   |||| |||||||||||||||||||    
T  16410079 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaa 16410155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 231
Target Start/End: Original strand, 15211484 - 15211703
Alignment:
Q  5 gactcatgcagcttagttaattaacaaacagcaacataggcagtat----acaacaacatgacataataatatcaatttcaattcatcaacatcttatgt 100  Q
    |||||||||| |||||||||||||| ||||||| ||||||||| ||    |||||| |||||||||| ||||||| ||  |||||| |||||||| |  |    
T  15211484 gactcatgcaacttagttaattaac-aacagcagcataggcagaatcacaacaacatcatgacataacaatatcatttataattca-caacatctcaatt 15211581  T
Q  101 atacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcat 199  Q
    || |||  |  |||||||  ||| ||| | |||||||||||||||||||||          |||||| ||||||||||| || ||  | ||| || | ||    
T  15211582 attcaataaaacttcaagcgatgtatacaacattatatcacatcataatca----------atcttaaacagcttcacatatcatcttaaacgtcattat 15211671  T
Q  200 taagtcttaatgctgcccaaaggttcaactct 231  Q
    |||||||||| ||| |||||||||||||||||    
T  15211672 taagtcttaaagctacccaaaggttcaactct 15211703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 27216880 - 27217007
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||| ||||||||||||||||||| |||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  27216880 gaccaactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctca 27216977  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  27216978 attattcacatataattcaagtaatgcata 27217007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 18154939 - 18154882
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaaca 59  Q
    |||||||||||||||||| ||||| |||| || ||||||||||||||  ||||||||||    
T  18154939 gaccgactcatgcagcttggttaaataac-aatagcaacataggcagattacaacaaca 18154882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 22072944 - 22072981
Alignment:
Q  9 catgcagcttagttaattaacaaacagcaacataggca 46  Q
    |||||||||||||||| ||||||||| |||||||||||    
T  22072944 catgcagcttagttaaataacaaacaacaacataggca 22072981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 13869366 - 13869442
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaa 76  Q
    |||||||||||||||||||||||| |||| |||||| ||| | | |||||||   |||| |||||||||||||||||||    
T  13869366 gaccgactcatgcagcttagttaaataac-aacagcgacaca-gtagtatacaaaaacagcatgacataataatatcaa 13869442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 15144135 - 15144096
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacat 41  Q
    |||||||||||||||||||||||| |||| |||||||||||    
T  15144135 gaccgactcatgcagcttagttaaataac-aacagcaacat 15144096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 15754981 - 15754910
Alignment:
Q  5 gactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatatc 74  Q
    |||||||||||||||||||| ||||||| | ||| ||||| ||||| |||  || ||||| |||||||||||    
T  15754981 gactcatgcagcttagttaaataacaaataacaatataggtagtatgcaaaccatcatgatataataatatc 15754910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 163; Significance: 3e-87; HSPs: 2)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 5 - 236
Target Start/End: Complemental strand, 15557 - 15325
Alignment:
Q  5 gactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatcttatgtat 102  Q
    |||||||||||||||||||| ||||||  |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15557 gactcatgcagcttagttaaataacaag-agcaacataggcagtatacaaaacaacatgacataataatatcaatttcaattcatcaacatcttatgtat 15459  T
Q  103 acaaatattcttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaa 202  Q
    | ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||    
T  15458 aaaaatattcttcaagtaatgcataaatattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaaccttattattaa 15359  T
Q  203 gtcttaatgctgcccaaaggttcaactctcgaca 236  Q
    |||||||| || ||||| |  |||||||||||||    
T  15358 gtcttaatcctacccaacgagtcaactctcgaca 15325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 7391 - 7459
Alignment:
Q  78 ttcaattcatcaacatcttatgtatacaaatattcttcaagtaatgcataatcattatatcacatcata 146  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||| |||||||  ||||||||    
T  7391 ttcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcata 7459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351 (Bit Score: 162; Significance: 1e-86; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 16305 - 16538
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaacatgacataataatatcaatttcaattcatcaacatcttatgt 100  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||| ||||||    
T  16305 gaccgactcatgcagcttagttaaataagaaacagcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatattatgt 16404  T
Q  101 atacaaatattcttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcatt 200  Q
    ||||||| |||||||||||||||||||| ||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||| | |||    
T  16405 atacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattatt 16504  T
Q  201 aagtcttaatgctgcccaaaggttcaactctcga 234  Q
    |||||||||| || |||||  |||||||||||||    
T  16505 aagtcttaatcctacccaagcgttcaactctcga 16538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 156; Significance: 5e-83; HSPs: 3)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 1312 - 1547
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaacatgacataataatatcaatttcaattcatcaacatcttatgt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||| ||||||| |||||||||||||||||||||||    
T  1312 gaccgactcatgcagcttagttaaataacaaacagcaacataggcagtgtacaacatcatgacataattatatcaaattcaattcatcaacatcttatgt 1411  T
Q  101 atacaaatattcttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcatt 200  Q
    ||||||| |||||||||||||||||||| ||||||| ||| ||||||||| |||||||||||||||| |||||||| |||||||| |||||||| |  ||    
T  1412 atacaaacattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcatagattatagttaacctcattctt 1511  T
Q  201 aagtcttaatgctgcccaaaggttcaactctcgaca 236  Q
    |||||||||| || ||||| ||| ||||||||||||    
T  1512 aagtcttaatcctacccaagggtccaactctcgaca 1547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 7289 - 7524
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaacatgacataataatatcaatttcaattcatcaacatcttatgt 100  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||    
T  7289 gaccgactcatgcagcttagttaaataacaaacaacaacataggcagtatacaacaacatgaaataattatatcaaattcaattcatcaacatcttatgt 7388  T
Q  101 atacaaatattcttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcatt 200  Q
    ||||||| |||||||||||||||||||| ||||||| ||| ||||||||| |||||||||||||||| |||||||| |||||||| |||||||| |  ||    
T  7389 atacaaacattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcatagattatagttaacctcattctt 7488  T
Q  201 aagtcttaatgctgcccaaaggttcaactctcgaca 236  Q
    |||||||||| || ||||| ||| ||||||||||||    
T  7489 aagtcttaatcctacccaagggtccaactctcgaca 7524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 15336 - 15291
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcag 47  Q
    |||||||||||||||||||||||| |||| || ||||||||||||||    
T  15336 gaccgactcatgcagcttagttaaataac-aatagcaacataggcag 15291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 155; Significance: 2e-82; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 4 - 236
Target Start/End: Complemental strand, 14053396 - 14053162
Alignment:
Q  4 cgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa-caacatgacataataatatcaatttcaattcatcaacat-cttatgta 101  Q
    ||||||||||| ||||||||| ||||||||| || ||||| |||||||||| || |||||||||||||||||||||||||||||||||||| |||||| |    
T  14053396 cgactcatgcaacttagttaaataacaaacaacagcatagacagtatacaaacagcatgacataataatatcaatttcaattcatcaacattcttatgca 14053297  T
Q  102 tacaaatattcttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcatta 201  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| |  |||    
T  14053296 tacaaatattcttcaagtaatgcataaacattatatcacatcataatcaacaacaacatatcttatacggcttcacagattataattaacctcattgtta 14053197  T
Q  202 agtcttaatgctgcccaaaggttcaactctcgaca 236  Q
    ||||||||| || ||||| ||||||||||||||||    
T  14053196 agtcttaatcctacccaagggttcaactctcgaca 14053162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 7088900 - 7089138
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||   ||||||||||||||||||| ||||||||||||||||||    
T  7088900 gaccgactcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatctta 7088998  T
Q  98 tgtatacaaatattcttcaagtaatgcataat-cattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctctt 196  Q
      ||| |||||||| ||||||||||||||||  ||||||||||||||||||| | |||||||| |||||| ||| |||||||||||||||||||||||||    
T  7088999 catattcaaatattattcaagtaatgcataaaacattatatcacatcataattagcaacaacacatcttaaacaacttcacagattataattaacctctt 7089098  T
Q  197 cattaagtcttaatgctgcccaaaggttcaactctcgaca 236  Q
    ||||||||||||||||| | ||||||||||||||||||||    
T  7089099 cattaagtcttaatgctactcaaaggttcaactctcgaca 7089138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 12902780 - 12903014
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||   |||||||||||||||||||  |||||||||||||||||    
T  12902780 gaccgactcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacataataatatcaattgtaattcatcaacatctta 12902878  T
Q  98 tgtatacaaatattcttcaagtaatgcataat-cattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctctt 196  Q
      ||| |||||||| ||||||||||||||||  ||||||||||||||||||||| |||||||| |||||| |||||||||||||||||||||||||||||    
T  12902879 aatattcaaatattattcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacagattataattaacctctt 12902978  T
Q  197 cattaagtcttaatgctgcccaaaggttcaactctc 232  Q
    |||||||||||||| || ||||||||||||||||||    
T  12902979 cattaagtcttaatcctacccaaaggttcaactctc 12903014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 17046510 - 17046719
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaacatgacataataatatcaatttcaattcatcaacatcttatgt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||||| ||||||| |||||||||||||||||||||||    
T  17046510 gaccgactcatgcagcttagttaaataacaaacagcaacataggtagtatagaacaacatgacataattatatcaaattcaattcatcaacatcttatgt 17046609  T
Q  101 atacaaatattcttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcatt 200  Q
    ||||||| ||||||||||||||| |||| ||||||| |||||| |||||| |||||||||||||||| |||||||||||||||||||||||||  | |||    
T  17046610 atacaaacattcttcaagtaatgtataaacattataacacatcttaatcaacaacaacatatcttattcagcttcacagattataattaaccttattatt 17046709  T
Q  201 aagtcttaat 210  Q
    ||||||||||    
T  17046710 aagtcttaat 17046719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 3 - 236
Target Start/End: Original strand, 44052854 - 44053090
Alignment:
Q  3 ccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatcttatg 99  Q
    ||||||||||||||| |||||| |||||| || ||||||||||||||||||| ||||   ||||||||||||||||||| ||||||||||||||||||      
T  44052854 ccgactcatgcagctcagttaaataacaa-catcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaa 44052952  T
Q  100 tatacaaatattcttcaagtaatgc--ataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttc 197  Q
    ||| |||||||||||||||||||||  |||| ||||||||||||||||||||| || || || |||||| |||||||||||||||||||||||| || ||    
T  44052953 tattcaaatattcttcaagtaatgctcataa-cattatatcacatcataatcaacatcagcacatcttaaacagcttcacagattataattaacatcatc 44053051  T
Q  198 attaagtcttaatgctgcccaaaggttcaactctcgaca 236  Q
    ||||||||||||||||  || ||||||||||||||||||    
T  44053052 attaagtcttaatgctatcccaaggttcaactctcgaca 44053090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 4 - 224
Target Start/End: Complemental strand, 23374454 - 23374231
Alignment:
Q  4 cgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa---caacatgacataataatatcaatttcaattcatcaacatcttatgt 100  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||||||   || ||||||||||  ||||||||| ||||||| ||||||||||  |    
T  23374454 cgactcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaatcagcatgacataaatatatcaattgcaattcaacaacatcttaaat 23374356  T
Q  101 atacaaatattcttcaagtaatgcataat-cattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcat 199  Q
    || |||||| |  |||||||||||||||  ||||||||||||||||||||| |||||||| |||||| | ||||||| |||||||| |||||||||||||    
T  23374355 attcaaataattctcaagtaatgcataaaacattatatcacatcataatcaacaacaacagatcttaaaaagcttcagagattatagttaacctcttcat 23374256  T
Q  200 taagtcttaatgctgcccaaaggtt 224  Q
    |||||||||||||| ||||||||||    
T  23374255 taagtcttaatgctacccaaaggtt 23374231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 22636458 - 22636691
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||||| || |||||||| |||| ||||| ||||   ||||||||||||||||||| ||||||||||||||||||    
T  22636458 gaccgactcatgcagcttagttaaataacaa-caacaacatagacagtttacaaaaacagcatgacataataatatcaattgcaattcatcaacatctta 22636556  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctctt 196  Q
      ||| |||||||||||||||||||||||| | ||||||||||||||||||||  || ||||| |||||| |||||||||||||||||||||||| || |    
T  22636557 aatattcaaatattcttcaagtaatgcatataacattatatcacatcataatcgacatcaacacatctta-acagcttcacagattataattaacatcct 22636655  T
Q  197 cattaagtcttaatgctgcccaaaggttcaactctc 232  Q
    | |||||||||||| || ||| ||||||||| ||||    
T  22636656 cgttaagtcttaatactaccccaaggttcaattctc 22636691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 16377619 - 16377387
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa-caacatgacataataatatcaatttcaattcatcaacatcttatg 99  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||| || ||||||||||||||||||| | ||| ||| |||||||| |      
T  16377619 gaccgactcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaat 16377521  T
Q  100 tatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttca 198  Q
    ||||||   ||  |||||||||||| || | ||||||||||||||||||||| || ||||  |||||| |||||| ||||||||||||||||| || |||    
T  16377520 tatacattcataattcaagtaatgcgtataacattatatcacatcataatcaacatcaacgcatcttaaacagctccacagattataattaacatcatca 16377421  T
Q  199 ttaagtcttaatgctgcccaaaggttcaactctc 232  Q
    |||||||| ||| || ||| ||||||||||||||    
T  16377420 ttaagtctcaatactaccccaaggttcaactctc 16377387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 7893726 - 7893958
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||| ||||||||||||||||| ||||||  ||||||||||||||||||||| ||||   ||||||||||||||||||| ||| ||| || |||||||    
T  7893726 gaccgattcatgcagcttagttaaataacaat-agcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcaacatcatctta 7893824  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctctt 196  Q
      ||| ||| ||| |||||||||||||| | | |||||| |||||||||||||| |||||    |||||| |||||||||||||||||||||||| || |    
T  7893825 aatattcaattatacttcaagtaatgcacataccattatttcacatcataatcagcaacac---atcttaaacagcttcacagattataattaacatcat 7893921  T
Q  197 cattaagtcttaatgctgcccaaaggttcaactctcg 233  Q
    | ||||||||||||  | ||| |||||||||||||||    
T  7893922 cgttaagtcttaatattaccccaaggttcaactctcg 7893958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 104 - 236
Target Start/End: Original strand, 3096772 - 3096904
Alignment:
Q  104 caaatattcttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaag 203  Q
    ||||||||||||||||||||||||| |||| |||| ||||||||||| |||||||| |||||| ||||||||||| ||||||||||||||| ||||||||    
T  3096772 caaatattcttcaagtaatgcataaacattgtatctcatcataatcagcaacaacacatcttaaacagcttcacatattataattaacctcatcattaag 3096871  T
Q  204 tcttaatgctgcccaaaggttcaactctcgaca 236  Q
    | || || || ||||||||||||||||||||||    
T  3096872 tatttatcctacccaaaggttcaactctcgaca 3096904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 16240067 - 16239834
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatcttat 98  Q
    |||| ||||||||| |||| |||| ||||||  ||||| |||||||||||||||  || ||||||||||||||||||| | ||| ||| ||||||||||     
T  16240067 gaccaactcatgcaacttaattaaataacaat-agcaaaataggcagtatacaaaacagcatgacataataatatcaaatgcaagtcaacaacatcttaa 16239969  T
Q  99 gtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttc 197  Q
     ||| ||| ||| ||| |||||||||| | | |||||||||| |||||||||| || ||||| |||||| |||||||| ||||||||||||||| || ||    
T  16239968 atattcaattatactttaagtaatgcaaataacattatatcatatcataatcaacatcaacacatcttaaacagcttcgcagattataattaacatcatc 16239869  T
Q  198 attaagtcttaatgctgcccaaaggttcaactctc 232  Q
    ||||||||||||| || ||| || |||||||||||    
T  16239868 attaagtcttaatactaccccaaagttcaactctc 16239834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 16270333 - 16270145
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatcttat 98  Q
    ||||||||||||||||||| |||| ||||||  |||||||||||||||||||||  || ||||||||||||||||||| | ||| | | ||||||||||     
T  16270333 gaccgactcatgcagcttaattaaataacaat-agcaacataggcagtatacaaaacagcatgacataataatatcaaatgcaagttaacaacatcttaa 16270235  T
Q  99 gtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataat 187  Q
     ||| ||| ||| |||||||||||||| | | ||||||||||||||||||||| || ||||| |||||| ||||||||||||||||||||    
T  16270234 atattcaattatacttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataat 16270145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 5 - 231
Target Start/End: Original strand, 14038675 - 14038904
Alignment:
Q  5 gactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa---caacatgacataataatatcaatttcaattcatcaacatcttatgta 101  Q
    |||||||||||||||||||| |||||| |||||||| | |||||||||||   ||||||| |||||||||||||| | ||| ||| |||||||| |  ||    
T  14038675 gactcatgcagcttagttaaataacaa-cagcaacacatgcagtatacaaaaacaacatggcataataatatcaaatgcaagtcaacaacatctcaatta 14038773  T
Q  102 tacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcatt 200  Q
    ||||   ||  ||||||||||||| | | ||||||||||||||||||||| || ||||| || ||| |||||||||||||||||||||||  || |||||    
T  14038774 tacattcatatttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatgttaaacagcttcacagattataattaatatcatcatt 14038873  T
Q  201 aagtcttaatgctgcccaaaggttcaactct 231  Q
    |||||| ||| || ||| |||||||||||||    
T  14038874 aagtctcaatactaccccaaggttcaactct 14038904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 7798797 - 7798958
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||   ||||||||||||||||||| ||| ||||||||||||||    
T  7798797 gaccgactcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcatcaacatctta 7798895  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaaca 159  Q
      ||| ||| ||| |||||||||||||| | | |||| ||||||| |||||||| || |||||    
T  7798896 aatattcaattatacttcaagtaatgcacataacattgtatcacaacataatcaacatcaaca 7798958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 114 - 232
Target Start/End: Complemental strand, 17048055 - 17047936
Alignment:
Q  114 tcaagtaatgcataat-cattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaatgc 212  Q
    |||||||||||||||  ||||||||||||||||||||| |||||||| |||||| |||||||||||| || ||||||  ||||||||||||||||||| |    
T  17048055 tcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacaggttgtaattagtctcttcattaagtcttaatac 17047956  T
Q  213 tgcccaaaggttcaactctc 232  Q
    | ||||||||||||||||||    
T  17047955 tacccaaaggttcaactctc 17047936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 13949 - 13800
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat--acaacaacatgacataataatatcaatttcaattcatcaacatcttat 98  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||  | |||||||||| |||| |||||||| | ||| |||||||||||| |     
T  13949 gaccgactcatgcagcttagttaataaacaaacagcaacataggcagtatgcaaaacaacatgatataacaatatcaaatgcaagtcatcaacatctcaa 13850  T
Q  99 gtatacaaatattcttcaagtaatgcata-atcattatatcacatcataa 147  Q
     ||| || ||||  ||||||||||| ||| |  |||||||||||| ||||    
T  13849 atattcatatataattcaagtaatgtatatacaattatatcacattataa 13800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 6899914 - 6900062
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatcttat 98  Q
    |||||||||||||| ||||||||| ||||||  |||||||||||||||||||||  ||||||  |||||||||||||| | ||| ||| ||||||||||     
T  6899914 gaccgactcatgcatcttagttaaataacaat-agcaacataggcagtatacaaaacaacatagcataataatatcaaatgcaagtcaacaacatcttaa 6900012  T
Q  99 gtatacaaatattcttcaagtaatg--cataatcattatatcacatcataa 147  Q
     ||| ||| ||| ||||||||||||  ||||| ||||||||||||||||||    
T  6900013 atattcaattatacttcaagtaatgtacataa-cattatatcacatcataa 6900062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 64 - 150
Target Start/End: Complemental strand, 15121834 - 15121749
Alignment:
Q  64 ataataatatcaatttcaattcatcaacatcttatgtatacaaatattcttcaagtaatgcataatcattatatcacatcataatca 150  Q
    ||||| ||||||||| ||||||||||||||||||||||||||| || |||||||||||||||||| |||||||  ||||||||||||    
T  15121834 ataattatatcaatt-caattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcataatca 15121749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 150
Target Start/End: Complemental strand, 43256227 - 43256106
Alignment:
Q  31 aacagcaacataggcagtatac-aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatacaaat-attcttcaagtaatgcata- 127  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||||   ||| ||||| |||||| ||||||||||||     
T  43256227 aacagcaacataggcagcataccaacaacatgacataataatatcaatttcaattcaacaacatcttgaatattcaaataattctt-aagtaatgcatat 43256129  T
Q  128 atcattatatcacatcataatca 150  Q
    |  |||||||||||| |||||||    
T  43256128 aatattatatcacattataatca 43256106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 52873465 - 52873367
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||   |||| ||||||||||||||||||||| ||| ||| || |||||||    
T  52873465 gaccgactcatgcagcttagttaaataac-aacagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcaacatcatctta 52873367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 15551840 - 15551915
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatatc 74  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| |||  || ||||| |||||||||||    
T  15551840 gaccgactcatgcagcttagttaaataacaaacagcaacataggcagtatgcaatccatcatgatataataatatc 15551915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 12288308 - 12288259
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat 50  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  12288308 gaccgactcatgcagcttagttaaataacaaacagcaacataggcagtat 12288259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 12774030 - 12774079
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat 50  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  12774030 gaccgactcatgcagcttagttaaataacaaacagcaacataggcagtat 12774079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 52243294 - 52243245
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat 50  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  52243294 gaccgactcatgcagcttagttaaataacaaacagcaacataggcagtat 52243245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 14280336 - 14280431
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatct 95  Q
    |||||||||||||||||||||||| |||| ||||||||||  ||||||||||   |||||||||||||||||||||||| | ||| ||| ||||||||    
T  14280336 gaccgactcatgcagcttagttaaataac-aacagcaaca-cggcagtatacaaaaacaacatgacataataatatcaaatgcaagtcaacaacatct 14280431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 3096316 - 3096373
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaaca 59  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||||| ||||    
T  3096316 gaccgactcatgcagcttagttaaataac-aacagcaacataggcagtatacaaaaaca 3096373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 22353856 - 22353984
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcag--tata-caacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||| ||| |||||| ||||| |||||||||  | || |||||||||||||||| |||||||||| ||||||| |||| ||| |    
T  22353856 gaccgactcatgcagcttaggtaaataacaa-cagcagcataggcagattgtagcaacaacatgacataacaatatcaattacaattcaacaacgtctca 22353954  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  22353955 attattcacatataattcaagtaatgcata 22353984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 46640554 - 46640504
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtata 51  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  46640554 gaccgactcatgcagcttagttaataaacaaacagcaacatagacagtata 46640504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 39706386 - 39706337
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat 50  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  39706386 gaccgactcatgcagcttagttaaataacaaacaacaacataggcagtat 39706337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 53082250 - 53082202
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagta 49  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  53082250 gaccgactcatgcagcttagttaataaacaaacagcaacataagcagta 53082202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 231
Target Start/End: Original strand, 15091093 - 15091152
Alignment:
Q  172 cttcacagattataattaacctcttcattaagtcttaatgctgcccaaaggttcaactct 231  Q
    |||||||||||||||||||| |||||||||||||| ||| || ||| |||||||||||||    
T  15091093 cttcacagattataattaacatcttcattaagtctcaatactaccccaaggttcaactct 15091152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 18215416 - 18215289
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| | |||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  18215416 gaccgactcatgcagcttagttaaataac-aacagcaacaca-gcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctca 18215319  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  18215318 attattcacatataattcaagtaatgcata 18215289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 44929022 - 44928894
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| | |||||||||   |||| |||||||||||||| |||| | ||| |||  ||||||| |    
T  44929022 gaccgactcatgcagcttagttaaataac-aacagcaacacaagcagtatacaaaaacagcatgacataataatgtcaaatgcaagtcaataacatctca 44928924  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  44928923 attattcacatataattcaagtaatgcata 44928894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 54798852 - 54798756
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatct 95  Q
    |||||||||||||||||||||| | |||||| |||||||| | ||||||||||| ||||   ||||||||||||||||| | ||| ||| ||||||||    
T  54798852 gaccgactcatgcagcttagttgaataacaa-cagcaacacaagcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacatct 54798756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 19618314 - 19618172
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| | |||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  19618314 gaccgactcatgcagcttagttaaataac-aacagcaacaca-gcagtatacaaaaacatcatgacataataatatcaaatgcaagtcaacaacgtctca 19618217  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcaca 141  Q
      ||| ||  |||  ||||||||||||||| || |||||||||||    
T  19618216 attattcacctataattcaagtaatgcatatataattatatcaca 19618172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 23803407 - 23803265
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| | | |||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  23803407 gaccgactcatgcagcttagttaaataac-aacagcaacaca-gtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctaa 23803310  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcaca 141  Q
      ||| || ||||  ||||||||||||||| || |||||||||||    
T  23803309 attattcacatataattcaagtaatgcatatataattatatcaca 23803265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 43198653 - 43198611
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacatag 43  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  43198653 gaccgactcatgcagcttagttaaataacaaacagcaacatag 43198611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 6190485 - 6190564
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaa---catgacataataatatcaat 77  Q
    ||||||||||||||||||||||||  | ||||||||||||||||||| || ||| ||   |||||||||| |||||||||    
T  6190485 gaccgactcatgcagcttagttaaacatcaaacagcaacataggcagcattcaaaaatagcatgacataacaatatcaat 6190564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 8574965 - 8574871
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatct 95  Q
    |||||||||||||||||||||||| |||||| |||| ||| |  ||||||||||  |||||||||||||||||||||| |  |||||| ||||||||    
T  8574965 gaccgactcatgcagcttagttaaataacaa-cagcgacacaa-cagtatacaaaacaacatgacataataatatcaaatgtaattcaacaacatct 8574871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 8846379 - 8846428
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat 50  Q
    |||||||| || |||||||||||| |||||||||||||||||||||||||    
T  8846379 gaccgacttattcagcttagttaaataacaaacagcaacataggcagtat 8846428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 12449 - 12322
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  12449 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctca 12352  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  12351 attattcacatataattcaagtaatgcata 12322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 15118494 - 15118367
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  15118494 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctca 15118397  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  15118396 attattcacatataattcaagtaatgcata 15118367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 44615308 - 44615435
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtataca---acaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| |  |||||||||   ||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  44615308 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaatacagcatgacataataatatcaaatgcaagtcaacaacgtctca 44615405  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  44615406 attattcacatataattcaagtaatgcata 44615435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 52312530 - 52312657
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  52312530 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctca 52312627  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  52312628 attattcacatataattcaagtaatgcata 52312657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 3515027 - 3515169
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    ||||||||||||||||||||||||  ||| |||||||||| | |||||||||   |||| || |||||||||||||||| | ||| ||| |||| ||| |    
T  3515027 gaccgactcatgcagcttagttaaaaaac-aacagcaacaca-gcagtatacaaaaacagcaagacataataatatcaaatgcaagtcaacaacgtctca 3515124  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcaca 141  Q
      ||| || ||||  ||||||||||||||| || |||||||||||    
T  3515125 attattcacatataattcaagtaatgcatatataattatatcaca 3515169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 19242719 - 19242861
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||| ||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  19242719 gaccgactcatgcagcttagttaaataac-aacagcgacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctca 19242816  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcaca 141  Q
      ||| || ||||  ||||||||||||||| || |||||||||||    
T  19242817 attattcacatataattcaagtaatgcatatataattatatcaca 19242861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 51464010 - 51463868
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| | | |||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  51464010 gaccgactcatgcagcttagttaaataac-aacagcaacaca-gtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctca 51463913  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcaca 141  Q
      ||| || ||||  ||||| ||||||||| || |||||||||||    
T  51463912 attattcacatataattcaaataatgcatatataattatatcaca 51463868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 1837651 - 1837503
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| |  ||||||||   |||| ||||||||||||||| ||| | ||| ||| |||| ||| |    
T  1837651 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataataccaaatgcaagtcaacaacgtctca 1837554  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcacatcataa 147  Q
      ||| || ||||  ||||||||||||||| |  |||||||||||| ||||    
T  1837553 attattcacatataattcaagtaatgcatatacgattatatcacattataa 1837503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 15355467 - 15355391
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaa 76  Q
    |||||||||||||||||||||||| |||| |||||| ||| | |||||||||   |||| |||||||||||||||||||    
T  15355467 gaccgactcatgcagcttagttaaataac-aacagcgacaca-gcagtatacaaaaacagcatgacataataatatcaa 15355391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 44773229 - 44773153
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaa 76  Q
    |||||||||||||||||||||||| |||| |||||||||| |  ||||||||   |||| |||||||||||||||||||    
T  44773229 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaa 44773153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 18239561 - 18239434
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| ||||||| || |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  18239561 gaccgactcatgcagcttagttaaataac-aacagcagcaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctca 18239464  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  18239463 attattcacatataattcaagtaatgcata 18239434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 16596686 - 16596746
Alignment:
Q  16 cttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatatc 74  Q
    ||||||||| ||||||||||||||||||| ||||| |||  || ||||| |||||||||||    
T  16596686 cttagttaaataacaaacagcaacataggtagtatgcaaaccatcatgatataataatatc 16596746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 17333304 - 17333347
Alignment:
Q  5 gactcatgcagcttagttaattaacaaacagcaacataggcagta 49  Q
    ||||||||||||||||||||| ||| ||||||||||||| |||||    
T  17333304 gactcatgcagcttagttaataaac-aacagcaacatagacagta 17333347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 154; Significance: 8e-82; HSPs: 54)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 16920728 - 16920495
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaacatgacataataatatcaatttcaattcatcaacatcttatgt 100  Q
    |||||||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||  ||||||| ||| |||||||||||||||||||    
T  16920728 gaccgactcatgcagcttagttaaataacaaacagcagcataggcagtatacaacatcatgacataagtatatcaaattccattcatcaacatcttatgt 16920629  T
Q  101 atacaaatattcttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcatt 200  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||| |||||||| |||||||| |||||||| |||||||| |  ||    
T  16920628 atacaaatattcttcaagtaatgcataaacattataccacatcataatcaacaacaacttatcttattcagcttcatagattatagttaacctcattctt 16920529  T
Q  201 aagtcttaatgctgcccaaaggttcaactctcga 234  Q
    |||||||||| || ||||| ||||||||||||||    
T  16920528 aagtcttaattctacccaagggttcaactctcga 16920495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 22831526 - 22831762
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaacatgacataataatatcaatttcaattcatcaacatctta--t 98  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| | | |||| |||||||||||| ||||||| ||||||||||||||||||||  |    
T  22831526 gaccgactcatgcagcttagttaaataacaaacagcaacataggcactgttcaacgacatgacataatcatatcaaattcaattcatcaacatcttagat 22831625  T
Q  99 gtatacaaatattcttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttca 198  Q
    ||||||||| |||||||||||||||||||| ||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||| |      
T  22831626 gtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattc 22831725  T
Q  199 ttaagtcttaatgctgcccaaaggttcaactctcgac 235  Q
    | |||||||||| || ||||| |||||||||||||||    
T  22831726 tcaagtcttaattctacccaagggttcaactctcgac 22831762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 35245609 - 35245758
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaacatgacataataatatcaatttcaattcatcaacatcttatgt 100  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35245609 gaccgactcatgcagcttagttaattaacaaacaccaacataggcagtatacaacaacatgacataataatatcaatttcaattcatcaacatcttatgt 35245708  T
Q  101 atacaaatattcttcaagtaatgcataatcattatatcacatcataatca 150  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35245709 atacaaatattcttcaagtaatgcataatcattatatcacatcataatca 35245758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 4 - 227
Target Start/End: Complemental strand, 20361055 - 20360829
Alignment:
Q  4 cgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatcttatgt 100  Q
    ||||||||||||||||||||| |||||| ||||||||||||||| |||||| ||||   ||||||||||||||||||| ||||||||||||||||||  |    
T  20361055 cgactcatgcagcttagttaaataacaa-cagcaacataggcagcatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaat 20360957  T
Q  101 atacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcat 199  Q
    || |||||||||||||||||||||||| | ||||||||||||||||||||| |||||||| |||||| ||||||||||| ||||||||||||||| ||||    
T  20360956 attcaaatattcttcaagtaatgcatataacattatatcacatcataatcaacaacaacacatcttaaacagcttcacatattataattaacctcatcat 20360857  T
Q  200 taagtcttaatgctgcccaaaggttcaa 227  Q
    ||||||||||| || |||||||||||||    
T  20360856 taagtcttaatactacccaaaggttcaa 20360829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 20638381 - 20638143
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa---caacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||| ||||||||||||||||||| |||||| || |||||||||||||||||||   |||||||||||||||||||||||| ||||| |||||||||||     
T  20638381 gaccaactcatgcagcttagttaaataacaa-caacaacataggcagtatacaaaaacaacatgacataataatatcaattgcaatttatcaacatcttt 20638283  T
Q  98 tgtatacaaatattcttcaagtaatgcataat-cattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctctt 196  Q
      ||| |||| ||||||||||||||||||||  | ||||||||||||||||||| || ||||| |||||| |||||||||||||||||||||||| || |    
T  20638282 aatattcaaacattcttcaagtaatgcataaaacgttatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacatcat 20638183  T
Q  197 cattaagtcttaatgctgcccaaaggttcaactctcgaca 236  Q
    ||||||||||||||| |  || ||||||||||||||||||    
T  20638182 cattaagtcttaatgttatcccaaggttcaactctcgaca 20638143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 11185528 - 11185746
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaacatgacataataatatcaatttcaattcatcaacatcttatgt 100  Q
    |||||||||||||||||||||||| ||||||||| ||||||  ||||| ||||||||||||||||||| ||||||| |||||||||||| |||||| |||    
T  11185528 gaccgactcatgcagcttagttaaataacaaacaacaacatgtgcagtgtacaacaacatgacataattatatcaaattcaattcatcagcatcttttgt 11185627  T
Q  101 atacaaatattcttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcatt 200  Q
    ||||||| |||||||||||||||||||| | ||||| ||| ||||||||| |||||||||||||||| || ||||||||||||   ||||||||   |||    
T  11185628 atacaaacattcttcaagtaatgcataaactttataacacttcataatcagcaacaacatatcttattcatcttcacagattacggttaacctcactatt 11185727  T
Q  201 aagtcttaatgctgcccaa 219  Q
    |||||||||| || |||||    
T  11185728 aagtcttaatcctacccaa 11185746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 29060563 - 29060796
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa---caacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||   |||||||||||||||||||||| | ||| ||| |||||||| |    
T  29060563 gaccgactcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacaacatgacataataatatcaaatgcaagtcaacaacatctca 29060661  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctctt 196  Q
     |||||||   ||  ||||||||||||| | | ||||||||| ||||||||||| || ||||| |||||| |||||||||||||||||||||||  || |    
T  29060662 agtatacattcataattcaagtaatgcacataacattatatctcatcataatcaacatcaacacatcttaaacagcttcacagattataattaatatcat 29060761  T
Q  197 cattaagtcttaatgctgcccaaaggttcaactct 231  Q
    |||||||||| ||| || ||| |||||||| ||||    
T  29060762 cattaagtctcaatactaccccaaggttcagctct 29060796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 17287894 - 17287660
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa---caacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||||| |||||||||||| |||||||||   || ||||||||||||||||||||| ||| ||| || |||||||    
T  17287894 gaccgactcatgcagcttagttaaataacaa-cagcaacataggtagtatacaaacacagcatgacataataatatcaattgcaagtcaacatcatctta 17287796  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctctt 196  Q
      ||| ||| ||| |||||||||||||| | | |||||| ||| | |||||||| |  ||||| |||||| |||||||||||| ||||||||||| || |    
T  17287795 aatattcaattatacttcaagtaatgcacataacattatgtcataacataatcaacctcaacacatcttaaacagcttcacaggttataattaacatcct 17287696  T
Q  197 cattaagtcttaatgctgcccaaaggttcaactctc 232  Q
    |||||||||| |||||| ||| ||||||||||||||    
T  17287695 cattaagtctcaatgctaccccaaggttcaactctc 17287660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 5 - 233
Target Start/End: Complemental strand, 22780321 - 22780090
Alignment:
Q  5 gactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatcttatgta 101  Q
    |||||||||||||||||||| |||||| ||  |||||||||| ||||||| ||||   ||||||||||||||||||| ||| ||| || |||||||  ||    
T  22780321 gactcatgcagcttagttaaataacaa-caaaaacataggcaatatacaaaaacagcttgacataataatatcaattgcaagtcaacatcatcttaaata 22780223  T
Q  102 tacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcatt 200  Q
    | ||| ||| ||||||||||||||   | |||||||||||| |||||||| || ||||| |||||| ||||||||||||||||| |||||| || |||||    
T  22780222 ttcaattatacttcaagtaatgcacgcaacattatatcacaacataatcaacatcaacacatcttaaacagcttcacagattatgattaacatcatcatt 22780123  T
Q  201 aagtcttaatgctgcccaaaggttcaactctcg 233  Q
    ||||||| || || ||| |||||||||||||||    
T  22780122 aagtctttatactaccccaaggttcaactctcg 22780090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 19303638 - 19303406
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatcttat 98  Q
    |||||||||||||||||||||||| |||||| || ||||| ||| |||||||||  |||||||||||||||||||||| | ||| ||| |||||||| |     
T  19303638 gaccgactcatgcagcttagttaaataacaa-caacaacacaggaagtatacaaaacaacatgacataataatatcaaatgcaagtcaacaacatctcaa 19303540  T
Q  99 gtatacaaatattcttcaagtaatg--cataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctctt 196  Q
     ||||||   ||  |||||||||||  ||||| ||||||||||||||||||||| || ||||| |||||  |||||||||||||||||||||||| || |    
T  19303539 ttatacattcatatttcaagtaatgtacataa-cattatatcacatcataatcaacatcaacacatcttcaacagcttcacagattataattaacatcat 19303441  T
Q  197 cattaagtcttaatgctgcccaaaggttcaactct 231  Q
    |||||| ||| | |||| ||| |||||||||||||    
T  19303440 cattaattctcagtgctaccccaaggttcaactct 19303406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 18409925 - 18409691
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    ||||||||||||||||| |||||| |||||| |||||||| |||||||||||   |||||||||||||||||||||||| | ||| ||| |||||||| |    
T  18409925 gaccgactcatgcagctcagttaaataacaa-cagcaacacaggcagtatacgaaaacaacatgacataataatatcaaatgcaagtcaacaacatctca 18409827  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctctt 196  Q
       || ||   ||  ||||| |||| |||| | ||||||||||||||||||||| || ||||| |||||| ||||||||||| |||||||||||| || |    
T  18409826 atcatccattcataattcaaataatacatataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacatattataattaacatcat 18409727  T
Q  197 cattaagtcttaatgctgcccaaaggttcaactctc 232  Q
    |||||||||| ||| || ||| ||||||||||||||    
T  18409726 cattaagtctcaatactaccctaaggttcaactctc 18409691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 25629453 - 25629220
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| | |||| ||| |||| | |||||||||   |||| |||||||||| |||||||| | ||| ||| |||||||| |    
T  25629453 gaccgactcatgcagcttagttaaattacaa-caggaacacatgcagtatacgaaaacagcatgacataacaatatcaaatgcaagtcaacaacatctca 25629355  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctctt 196  Q
      ||||||   ||  |||||||||||| || | ||||||||||||||||||||| || ||||| |||||| ||||||||||||||||||||||||  | |    
T  25629354 attatacattcataattcaagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacaacat 25629255  T
Q  197 cattaagtcttaatgctgcccaaaggttcaactct 231  Q
    |||||||||| ||| || ||| |||||||||||||    
T  25629254 cattaagtctcaatactaccccaaggttcaactct 25629220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 20593796 - 20594026
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||| |||||||||| |||||| ||| ||||||||||| | |||||||||   |||| ||||||||||||||||||| | ||| ||| |||||||| |    
T  20593796 gaccgaatcatgcagctcagttaaataa-aaacagcaacacatgcagtatacgaaaacagcatgacataataatatcaaatgcaagtcaacaacatctca 20593894  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctctt 196  Q
      |||||||  ||   ||||||||||| || | || |||||||||||||||||| || ||||| |||||| |||||||||||||||||||||| | |  |    
T  20593895 attatacaatcataaatcaagtaatgcgtataacaatatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattatcattat 20593994  T
Q  197 cattaagtcttaatgctgcccaaaggttcaac 228  Q
    |||||||||| ||| || ||| ||||||||||    
T  20593995 cattaagtctcaatactaccccaaggttcaac 20594026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 16496267 - 16496396
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa---caacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||   || ||||||||||||||||||||| ||||||| ||||||||||    
T  16496267 gaccgactcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaatcagcatgacataataatatcaattgcaattcaacaacatctta 16496365  T
Q  98 tgtatacaaatattcttcaagtaatgcataa 128  Q
      ||| |||||| |  |||||||||||||||    
T  16496366 aatattcaaataattctcaagtaatgcataa 16496396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 20109161 - 20109285
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatcttat 98  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| |||  |||||| | |||| |||||||| | ||| |||||||||||| |     
T  20109161 gaccgactcatgcagcttagttaataaacaaacagcaacataggcagtatgcaaaacaacataatataacaatatcaaatgcaagtcatcaacatctcaa 20109260  T
Q  99 gtatacaaatattcttcaagtaatg 123  Q
     ||| || ||||  |||||||||||    
T  20109261 atattcatatataattcaagtaatg 20109285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 5 - 231
Target Start/End: Complemental strand, 25603478 - 25603250
Alignment:
Q  5 gactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaacat---gacataataatatcaatttcaattcatcaacatcttatgta 101  Q
    |||||||||  |||||||||||||||| ||||| |||||||||  |||||||||||   ||||||| ||||||| ||  |||||| | |||||| |  ||    
T  25603478 gactcatgcgacttagttaattaacaa-cagcagcataggcagattacaacaacatcatgacataacaatatcatttataattca-ctacatctcaatta 25603381  T
Q  102 tacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcatt 200  Q
    | |||  |  |||||||||||| ||| | ||| |||||||||||||||||   || | | |||||| ||||||||||||||| || | ||| || |||||    
T  25603380 ttcaataaaacttcaagtaatgtatacaacatcatatcacatcataatcaatgactaaacatcttaaacagcttcacagattctattaaacatcgtcatt 25603281  T
Q  201 aagtcttaatgctgcccaaaggttcaactct 231  Q
    ||||||||| ||| |||||||||||||||||    
T  25603280 aagtcttaaagctacccaaaggttcaactct 25603250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 20076723 - 20076863
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac--aacaacatgacataataatatcaatttcaattcatcaacatcttat 98  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||| ||  |||| ||||||||||||||||||| | |||   ||||||||||||     
T  20076723 gaccgactcatgcagcttagttaaataac-aacagcaacataggcagtaaacaaaacagcatgacataataatatcaaatgcaa---atcaacatcttaa 20076818  T
Q  99 gtatacaaatattcttcaagtaatgcata-atcattatatcacat 142  Q
      || ||| ||| ||||||||||||| || | |||||||||||||    
T  20076819 aaattcaattatacttcaagtaatgcgtataacattatatcacat 20076863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 150
Target Start/End: Complemental strand, 27416008 - 27415887
Alignment:
Q  31 aacagcaacataggcagtatacaa-caacatgacataataatatcaatttcaattcatcaacatcttatgtatacaaat-attcttcaagtaatgcat-a 127  Q
    ||||||||||||||||| |||||| || |||||||||||| |||||||||||||||| |||||||||  |||| ||||| |||||| | ||||||||| |    
T  27416008 aacagcaacataggcagcatacaaacagcatgacataatattatcaatttcaattcaacaacatcttgagtattcaaataattctt-aggtaatgcataa 27415910  T
Q  128 atcattatatcacatcataatca 150  Q
    | ||||||||||||| |||||||    
T  27415909 aacattatatcacattataatca 27415887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 23019429 - 23019525
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat--acaacaacatgacataataatatcaatttcaattcatcaacatct 95  Q
    |||||||| |||||||||||||||| |||||||||||||||| |||||||  | |||||||||| |||| |||||||| | ||| ||| ||||||||    
T  23019429 gaccgacttatgcagcttagttaataaacaaacagcaacataagcagtatgcaaaacaacatgatataacaatatcaaatgcaagtcaacaacatct 23019525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 27333316 - 27333267
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat 50  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  27333316 gaccgactcatgcagcttagttaaataacaaacagcaacataggcagtat 27333267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 27394056 - 27394007
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat 50  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  27394056 gaccgactcatgcagcttagttaaataacaaacagcaacataggcagtat 27394007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 25644343 - 25644440
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatct 95  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||| ||| ||||   ||| |||| |||||||| |  || ||||||||||||    
T  25644343 gaccgactcatgcagcttagttaaataacagacagcaacataggcagtatgcaaaaacagcgtgatataacaatatcaaatgtaagtcatcaacatct 25644440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 19668394 - 19668436
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacatag 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  19668394 gaccgactcatgcagcttagttaattaacaaacagcaacatag 19668436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 9098612 - 9098563
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat 50  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  9098612 gaccgactcatgcagcttagttaaataacaaacagcaacaaaggcagtat 9098563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 23076753 - 23076801
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagta 49  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  23076753 gaccgactcatgcagcttagttaataaacaaacaacaacataggcagta 23076801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 231
Target Start/End: Complemental strand, 25611816 - 25611588
Alignment:
Q  5 gactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaacat---gacataataatatcaatttcaattcatcaacatcttatgta 101  Q
    |||||||||  |||||||||||||||| ||||| |||||||||  |||||||||||   ||||||| ||||||| ||  |||||| | |||||| |  ||    
T  25611816 gactcatgcgacttagttaattaacaa-cagcagcataggcagattacaacaacatcatgacataacaatatcatttataattca-ctacatctcaatta 25611719  T
Q  102 tacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcatt 200  Q
    | |||  |  |||||||||||| ||| | ||| |||||||||||||||||   || | | |||||| ||||||||| ||||| |  | ||| || |||||    
T  25611718 ttcaataaaacttcaagtaatgtatacaacatcatatcacatcataatcaatgactaaacatcttaaacagcttcatagattctgttaaacatcgtcatt 25611619  T
Q  201 aagtcttaatgctgcccaaaggttcaactct 231  Q
    ||||| ||| ||| |||||||||||||||||    
T  25611618 aagtcctaaagctacccaaaggttcaactct 25611588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 25656649 - 25656725
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaa 76  Q
    |||||||||||||||||||||||| |||| |||||||||||| |||||||||   |||| |||||||||||||||||||    
T  25656649 gaccgactcatgcagcttagttaaataac-aacagcaacata-gcagtatacaaaaacagcatgacataataatatcaa 25656725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 28496569 - 28496494
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatatc 74  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||||| |||  || ||||| |||||||||||    
T  28496569 gaccgactcatgcagcttagttaaataacaattagcaacataggcagtatgcaaaccatcatgatataataatatc 28496494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 29808980 - 29808905
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatatc 74  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||||| |||  || ||||| |||||||||||    
T  29808980 gaccgactcatgcagcttagttaaataacaattagcaacataggcagtatgcaaaccatcatgatataataatatc 29808905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 35008171 - 35008219
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagta 49  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  35008171 gaccgactcatgcagcttagttaataaacaaacaacaacataggcagta 35008219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 123
Target Start/End: Original strand, 1595573 - 1595692
Alignment:
Q  5 gactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa---caacatgacataataatatcaatttcaattcatcaacatcttatgta 101  Q
    |||||||||||||||||||| |||||| ||||||||||  ||||||||||   |||||||||||||||||||||| | ||||||| |||| ||| |  ||    
T  1595573 gactcatgcagcttagttaaataacaa-cagcaacataa-cagtatacaaaaacaacatgacataataatatcaaatgcaattcaacaacgtctcaatta 1595670  T
Q  102 tacaaatattcttcaagtaatg 123  Q
    | || ||||  |||||||||||    
T  1595671 ttcacatataattcaagtaatg 1595692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 2291322 - 2291195
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| |  ||||||||   |||||||||||||||||||||||| | ||| ||| |||| ||| |    
T  2291322 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacaacatgacataataatatcaaatgcaagtcaacaacgtctca 2291225  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  2291224 attattcacatataattcaagtaatgcata 2291195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 25754829 - 25754971
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| | | |||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  25754829 gaccgactcatgcagcttagttaaataac-aacagcaacaca-gtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctca 25754926  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcaca 141  Q
      ||| || ||||  ||||||||||||||| || |||||||||||    
T  25754927 attattcacatataattcaagtaatgcatatataattatatcaca 25754971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 30676852 - 30676710
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| | |||||||||   |||| ||||| ||||||||||||| | ||| ||| |||| ||| |    
T  30676852 gaccgactcatgcagcttagttaaataac-aacagcaacaca-gcagtatacaaaaacagcatgatataataatatcaaatgcaagtcaacaacgtctca 30676755  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcaca 141  Q
      ||| || ||||  ||||||||||||||| || |||||||||||    
T  30676754 attattcacatataattcaagtaatgcatatataattatatcaca 30676710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 33443070 - 33443119
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtata 51  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  33443070 gaccgactcatgcagcttagttaataaac-aacagcaacataggcagtata 33443119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 4185919 - 4185827
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaac 91  Q
    |||||||||||||||| |||||||  |||| ||||||||||||||||||| |||  || ||||| |||| |||||| | | ||||||||||||    
T  4185919 gaccgactcatgcagcatagttaaacaacagacagcaacataggcagtatgcaactcatcatgatataacaatatcgaatgcaattcatcaac 4185827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 19652218 - 19652267
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat 50  Q
    ||||||||||||||||||||||||  |||||||| |||||||||||||||    
T  19652218 gaccgactcatgcagcttagttaaacaacaaacaacaacataggcagtat 19652267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 22782247 - 22782323
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaa 76  Q
    |||||||||||||||||||||||| |||| |||||||||| | |||||||||   |||| |||||||||||||||||||    
T  22782247 gaccgactcatgcagcttagttaaataac-aacagcaacaca-gcagtatacaaaaacagcatgacataataatatcaa 22782323  T

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Target: chr6; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 12742337 - 12742464
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  12742337 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctca 12742434  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  12742435 attattcacatataattcaagtaatgcata 12742464  T

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Target: chr6; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 18334734 - 18334607
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  18334734 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctca 18334637  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  18334636 attattcacatataattcaagtaatgcata 18334607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 19005066 - 19005193
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  19005066 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctca 19005163  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  19005164 attattcacatataattcaagtaatgcata 19005193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 19859061 - 19858934
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  19859061 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctca 19858964  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  19858963 attattcacatataattcaagtaatgcata 19858934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 24422567 - 24422694
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  24422567 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctca 24422664  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  24422665 attattcacatataattcaagtaatgcata 24422694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 33861814 - 33861941
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  33861814 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctca 33861911  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  33861912 attattcacatataattcaagtaatgcata 33861941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 33864298 - 33864425
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  33864298 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctca 33864395  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  33864396 attattcacatataattcaagtaatgcata 33864425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 34963393 - 34963535
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||| ||||||||| |||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  34963393 gaccgactcatgcaacttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctca 34963490  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcaca 141  Q
      ||| || ||||  ||||||||||||||| || |||||||||||    
T  34963491 attattcacatataattcaagtaatgcatatataattatatcaca 34963535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 25688525 - 25688598
Alignment:
Q  4 cgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaa 76  Q
    ||||||||||||||||||||| |||| ||||||||||||  ||||||||   |||| |||||||||||||||||||    
T  25688525 cgactcatgcagcttagttaaataac-aacagcaacata-acagtatacaaaaacagcatgacataataatatcaa 25688598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 127
Target Start/End: Complemental strand, 1541050 - 1540926
Alignment:
Q  4 cgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaac---atgacataataatatcaatttcaattcatcaacatcttatgt 100  Q
    ||||||||||||||||||||| |||| |||||||||| |  |||||||||| |||   |||||||||||||||||| | ||| ||| |||| ||| |  |    
T  1541050 cgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagtatgacataataatatcaaatgcaagtcaacaacgtctcaatt 1540953  T
Q  101 atacaaatattcttcaagtaatgcata 127  Q
    || || ||||  |||||||||||||||    
T  1540952 attcacatataattcaagtaatgcata 1540926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 8227609 - 8227534
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat--acaacaacatgacataataatatc 74  Q
    ||||||||||||||||||||||| ||||  | ||||||| ||||||||||  | |||| ||||| |||||||||||    
T  8227609 gaccgactcatgcagcttagttagttaatgatcagcaacgtaggcagtatgcaaaacatcatgatataataatatc 8227534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 16448668 - 16448593
Alignment:
Q  2 accgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaa 76  Q
    ||||||||||||||||||||||| |||| |||||| ||| | |||||||||   |||| |||||||||||||||||||    
T  16448668 accgactcatgcagcttagttaaataac-aacagcgacaca-gcagtatacaaaaacagcatgacataataatatcaa 16448593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 4186390 - 4186482
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaac 91  Q
    |||||||||||||||| |||||||  ||||  ||||||||||| |||||| |||  || ||||| |||| |||||| | | ||||||||||||    
T  4186390 gaccgactcatgcagcatagttaaacaacaggcagcaacatagacagtatgcaactcatcatgatataacaatatcgaatgcaattcatcaac 4186482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 22432269 - 22432325
Alignment:
Q  2 accgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaaca 59  Q
    ||||||||||||| ||| |||||||||| || |||| |||||||||| ||||||||||    
T  22432269 accgactcatgcaacttggttaattaac-aatagcagcataggcagtttacaacaaca 22432325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 22438819 - 22438875
Alignment:
Q  2 accgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaaca 59  Q
    ||||||||||||| ||| |||||||||| || |||| |||||||||| ||||||||||    
T  22438819 accgactcatgcaacttggttaattaac-aatagcagcataggcagtttacaacaaca 22438875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 1561330 - 1561401
Alignment:
Q  5 gactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatatc 74  Q
    |||||||||||||||||||| ||||||| | ||| ||||| ||||| |||  || ||||| |||||||||||    
T  1561330 gactcatgcagcttagttaaataacaaataacaatataggtagtatgcaaaccatcatgatataataatatc 1561401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1842 (Bit Score: 153; Significance: 3e-81; HSPs: 1)
Name: scaffold1842
Description:

Target: scaffold1842; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 1146 - 909
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaa---catgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||||| || ||||||||||||||||||| ||   ||||||||||||||||||||| ||||||||||||||||||    
T  1146 gaccgactcatgcagcttagttaaataacaa-caacaacataggcagtatacaaaaatagcatgacataataatatcaattgcaattcatcaacatctta 1048  T
Q  98 tgtatacaaatattcttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttc 197  Q
      ||| |||||||| |||||||||||||||| ||||||||||||||||||||| | | |||| |||||| ||||||||| ||||||||||||||||||||    
T  1047 aatattcaaatattattcaagtaatgcataaacattatatcacatcataatcaaccaaaacacatcttaaacagcttcaaagattataattaacctcttc 948  T
Q  198 attaagtcttaatgctgcccaaaggttcaactctcgaca 236  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  947 attaagtcttaatgctacccaaaggttcaactctcgaca 909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 153; Significance: 3e-81; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 47018 - 47247
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaacatgacataataatatcaatttcaattcatcaacatcttatgt 100  Q
    |||||||||||| ||||||||||| ||||||||| ||||||||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||    
T  47018 gaccgactcatgtagcttagttaaataacaaacaacaacataggcagtttacagcagcatgacataataatatcaatttcaattcatcaacatcttatgt 47117  T
Q  101 atacaaatattcttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcatt 200  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||      ||| |  ||    
T  47118 atacaaatattctccaagtaatgcataaacattatatcacatcataaacatcaacaacatatcttatacagcttcacagattata------ctcattgtt 47211  T
Q  201 aagtcttaatgctgcccaaaggttcaactctcgaca 236  Q
    |||||||||| || ||||| ||||||||||||||||    
T  47212 aagtcttaatcctacccaagggttcaactctcgaca 47247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 153; Significance: 3e-81; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 168076 - 167839
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaa---catgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||||| || ||||||||||||||||||| ||   ||||||||||||||||||||| ||||||||||||||||||    
T  168076 gaccgactcatgcagcttagttaaataacaa-caacaacataggcagtatacaaaaatagcatgacataataatatcaattgcaattcatcaacatctta 167978  T
Q  98 tgtatacaaatattcttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttc 197  Q
      ||| |||||||| |||||||||||||||| ||||||||||||||||||||| | | |||| |||||| ||||||||| ||||||||||||||||||||    
T  167977 aatattcaaatattattcaagtaatgcataaacattatatcacatcataatcaaccaaaacacatcttaaacagcttcaaagattataattaacctcttc 167878  T
Q  198 attaagtcttaatgctgcccaaaggttcaactctcgaca 236  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  167877 attaagtcttaatgctacccaaaggttcaactctcgaca 167839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 51936 - 52170
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||||| |||||||||||||| ||||||| ||||   ||||||||||||||||||| ||| ||| || |||||||    
T  51936 gaccgactcatgcagcttagttaaataacaa-cagcaacataggcaatatacaaaaacagcatgacataataatatcaattgcaagtcaacatcatctta 52034  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctctt 196  Q
      ||| ||| ||| |||||||||||||| | | |||||||||||| |||||||  || ||||| |||||| |||||||||||||||||||||||| || |    
T  52035 aatattcaattatacttcaagtaatgcacataacattatatcacaacataatctacatcaacacatcttaaacagcttcacagattataattaacatcat 52134  T
Q  197 cattaagtcttaatgctgcccaaaggttcaactctc 232  Q
    |||||||||||||| || ||| ||||||||||||||    
T  52135 cattaagtcttaatactaccccaaggttcaactctc 52170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 150; Significance: 2e-79; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 27250827 - 27250589
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||||||||| ||||   ||||||||||||||||||| ||||||||||||||||||    
T  27250827 gaccgactcatgcagcttagttaaataacaat-agcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatctta 27250729  T
Q  98 tgtatacaaatattcttcaagtaatgcataat-cattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctctt 196  Q
      ||| |||||||| ||||||||||||||||  ||||||||||||||||||||| |||||||| |||||| |||||||||||||||||||||||||||||    
T  27250728 aatattcaaatattattcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacagattataattaacctctt 27250629  T
Q  197 cattaagtcttaatgctgcccaaaggttcaactctcgaca 236  Q
    |||||||| | |||||| ||||||||||||||||||||||    
T  27250628 cattaagtatcaatgctacccaaaggttcaactctcgaca 27250589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 4 - 229
Target Start/End: Complemental strand, 38801483 - 38801258
Alignment:
Q  4 cgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaacatgacataataatatcaatttcaattcatcaacatcttatgtata 103  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| | ||||| || |||||||| ||||||| |||||||||||||||| |||| ||||    
T  38801483 cgactcatgcagcttagttaaataacaaacagcaacataggcagtgtgcaacagcaagacataattatatcaaattcaattcatcaacatattatatata 38801384  T
Q  104 caaatattcttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaag 203  Q
    ||| ||||||||||||||||||||| ||||||| |||||| |||||| |||||||||||||||| |||||||||| |||||| |||| ||| | ||||||    
T  38801383 caattattcttcaagtaatgcataaacattataacacatcgtaatcaacaacaacatatcttattcagcttcacaaattatagttaatctcattattaag 38801284  T
Q  204 tcttaatgctgcccaaaggttcaact 229  Q
    ||||||| || ||||| |||||||||    
T  38801283 tcttaatcctacccaagggttcaact 38801258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 21026703 - 21026929
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa---caacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||||| |||||| |||||||||||||||   || |||||| |||  ||||||||| ||||||| ||||||||||    
T  21026703 gaccgactcatgcagcttagttaaataacaa-cagcaatataggcagtatacaaaatcagcatgacgtaaatatatcaattgcaattcaacaacatctta 21026801  T
Q  98 tgtatacaaatattcttcaagtaatgcataat-cattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctctt 196  Q
      ||| |||||| |  |||||||||||||||  ||||||||||||||||||||| || ||||| |||||| |||||||||||||||||||||||||||||    
T  21026802 aatattcaaataattctcaagtaatgcataaaacattatatcacatcataatcaacagcaacacatcttaaacagcttcacagattataattaacctctt 21026901  T
Q  197 cattaagtcttaatgctgcccaaaggtt 224  Q
    ||||||||||||||||| ||||||||||    
T  21026902 cattaagtcttaatgctacccaaaggtt 21026929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 50210311 - 50210077
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa---caacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||   |||||||||||||||||||||| | ||| ||| |||||||| |    
T  50210311 gaccgactcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacaacatgacataataatatcaaatgcaagtcaacaacatctca 50210213  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctctt 196  Q
     |||||||   ||  |||||||||||| |  | ||||||||||||||||||||| || ||||| |||||| |||||||||||||||||||||||| || |    
T  50210212 agtatacattcataattcaagtaatgcgtttaacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacatcat 50210113  T
Q  197 cattaagtcttaatgctgcccaaaggttcaactctc 232  Q
    |||||||||| ||| || ||||||||||||||||||    
T  50210112 cattaagtctcaatactacccaaaggttcaactctc 50210077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 53 - 232
Target Start/End: Complemental strand, 22354616 - 22354436
Alignment:
Q  53 aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcat 151  Q
    |||| |||||||||| |||||||||| ||||||||||||||||||  ||| |||||||||||||||||||| ||| | |||||||||||||||||||||     
T  22354616 aacagcatgacataaaaatatcaattgcaattcatcaacatcttaaatattcaaatattcttcaagtaatgtatataacattatatcacatcataatcaa 22354517  T
Q  152 caacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaatgctgcccaaaggttcaactctc 232  Q
    || ||||| |||||| |||||||||||||||||||||||| || ||||||||||||||| || || |||||||||| ||||    
T  22354516 catcaacacatcttaaacagcttcacagattataattaacatcctcattaagtcttaatactacctaaaggttcaattctc 22354436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 34509803 - 34510033
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||   ||||||||| ||||||| | ||| ||| ||||||||||    
T  34509803 gaccgactcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacataatgatatcaaatgcaagtcaacaacatctta 34509901  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctctt 196  Q
      ||||||   ||   ||||||||||| || | ||||||||||||||||| ||| || ||||| |||||| ||||||||| |||||||||||||| || |    
T  34509902 attatacattcatatctcaagtaatgcttataacattatatcacatcatattcaacatcaacacatcttaaacagcttcaaagattataattaacatcat 34510001  T
Q  197 cattaagtcttaatgctgcccaaaggttcaac 228  Q
    |||||||||| ||| || ||| ||||||||||    
T  34510002 cattaagtctcaatactaccccaaggttcaac 34510033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 22532292 - 22532526
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||| |||||||||  |||||||| |||||| |||||||||||||||||||||| ||||   ||||||||||||||| ||| ||||||| ||||||||||    
T  22532292 gaccaactcatgcaatttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacataataatatccattgcaattcaacaacatctta 22532390  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctctt 196  Q
      ||| ||   ||  ||||||||||||| | | ||||||||||||||||||||| || ||||| |||||| |||||||||||| | |||| |||| || |    
T  22532391 aatattcattcataattcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagttcataaataacatcat 22532490  T
Q  197 cattaagtcttaatgctgcccaaaggttcaactctc 232  Q
    |||||||||| ||| || ||  ||||||||||||||    
T  22532491 cattaagtctcaatactacctcaaggttcaactctc 22532526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 5 - 232
Target Start/End: Original strand, 20135214 - 20135444
Alignment:
Q  5 gactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaacat---gacataataatatcaatttcaattcatcaacatcttatgta 101  Q
    |||||||||| |||||||||  |||||  |||| |||||||||  |||||||||||   |||||||||||||||  | ||||||| |||||||||| |||    
T  20135214 gactcatgcaacttagttaaacaacaat-agcagcataggcagattacaacaacatcatgacataataatatcatgtgcaattcaacaacatcttaagta 20135312  T
Q  102 tacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcatt 200  Q
    | |||  |  |||||||||||||||| | |||||||||| |||||||| | || ||||| |||||| ||||||||||||||||||||||||  | |||||    
T  20135313 ttcaataaaacttcaagtaatgcatacaacattatatcatatcataatgaacatcaacacatcttaaacagcttcacagattataattaacaacatcatt 20135412  T
Q  201 aagtcttaatgctgcccaaaggttcaactctc 232  Q
    | |||||| | || ||| ||||||||||||||    
T  20135413 aggtcttactactaccctaaggttcaactctc 20135444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 87 - 236
Target Start/End: Complemental strand, 22356185 - 22356034
Alignment:
Q  87 tcaacatcttatgtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatca-tcaacaacatatcttatacagcttcacagattat 184  Q
    |||||||| ||  ||| |||| ||||||||||||||||| | | ||||||||||||||||||||| ||| ||||| |||||| | |||||||||||||||    
T  22356185 tcaacatcataaatattcaaacattcttcaagtaatgcacataacattatatcacatcataatcaatcatcaacacatcttaaatagcttcacagattat 22356086  T
Q  185 aattaacctcttcattaagtcttaatgctgcccaaaggttcaactctcgaca 236  Q
    ||||||| || ||||||||||||||||||  || ||||||||||||||||||    
T  22356085 aattaacatcatcattaagtcttaatgctatcccaaggttcaactctcgaca 22356034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 87 - 236
Target Start/End: Complemental strand, 22357871 - 22357720
Alignment:
Q  87 tcaacatcttatgtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatca-tcaacaacatatcttatacagcttcacagattat 184  Q
    |||||||| ||  ||| |||| ||||||||||||||||| | | ||||||||||||||||||||| ||| ||||| |||||| | |||||||||||||||    
T  22357871 tcaacatcataaatattcaaacattcttcaagtaatgcacataacattatatcacatcataatcaatcatcaacacatcttaaatagcttcacagattat 22357772  T
Q  185 aattaacctcttcattaagtcttaatgctgcccaaaggttcaactctcgaca 236  Q
    ||||||| || ||||||||||||||||||  || ||||||||||||||||||    
T  22357771 aattaacatcatcattaagtcttaatgctatcccaaggttcaactctcgaca 22357720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 189
Target Start/End: Complemental strand, 22468790 - 22468604
Alignment:
Q  5 gactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatcttatgta 101  Q
    |||||||||| ||||||||| ||||||  ||||||||||||||  ||||||||||   |||||| |||||||||||| ||||||| ||||||||||  ||    
T  22468790 gactcatgcaacttagttaaataacaat-agcaacataggcagattacaacaacagcatgacatcataatatcaattgcaattcaacaacatcttaatta 22468692  T
Q  102 tacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataatta 189  Q
    | |||  ||   |||||||||||| | | ||||||||||||||||||| | || || || |||||| ||||||||||||||||||||||    
T  22468691 ttcaataatatctcaagtaatgcacataacattatatcacatcataatta-catcagcacatcttaaacagcttcacagattataatta 22468604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 114 - 196
Target Start/End: Original strand, 48603652 - 48603735
Alignment:
Q  114 tcaagtaatgcataat-cattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctctt 196  Q
    |||||||||||||||  ||||||||||||||||||||| |||||||| |||||| |||||||||||||||||||||||| ||||    
T  48603652 tcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacagattataattaacttctt 48603735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 150
Target Start/End: Original strand, 33797573 - 33797694
Alignment:
Q  31 aacagcaacataggcagtatacaa-caacatgacataataatatcaatttcaattcatcaacatcttatgtatacaaat-attcttcaagtaatgcat-a 127  Q
    |||||||||||| |||| |||||| |||||||||||||||||||||||||||||||| |||||||||   ||| ||||| |||||| ||||||||||| |    
T  33797573 aacagcaacatatgcagcatacaaacaacatgacataataatatcaatttcaattcaacaacatcttgaatattcaaataattctt-aagtaatgcataa 33797671  T
Q  128 atcattatatcacatcataatca 150  Q
    | ||||||||||||| |||||||    
T  33797672 aacattatatcacattataatca 33797694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 21896354 - 21896258
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac--aacaacatgacataataatatcaatttcaattcatcaacatct 95  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||||||||  |||| ||||| |||| |||||||| | ||| ||||||||||||    
T  21896354 gaccgactcatgcaacttagttaataaacaaacagcaacataggcagtatacaaaacagcatgatataacaatatcaaatgcaagtcatcaacatct 21896258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 21861668 - 21861572
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat--acaacaacatgacataataatatcaatttcaattcatcaacatct 95  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||  | |||| ||||| |||| |||||||| | ||| ||||||||||||    
T  21861668 gaccgactcatgcagcttagctaataaacaaacagcaacataggcagtatgcaaaacagcatgatataacaatatcaaatgcaagtcatcaacatct 21861572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 35261176 - 35261099
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat--acaacaacatgacataataatatcaa 76  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||  | |||| ||||| |||| ||||||||    
T  35261176 gaccgactcatgcagcttagttaataaacaaacagcaacataggcagtatgcaaaacagcatgatataacaatatcaa 35261099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 14295649 - 14295574
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatatc 74  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||| |||  || ||||| |||||||||||    
T  14295649 gaccgactcatgcagcttagttaaataacaaacagcaacataggtagtatgcaaaccatcatgatataataatatc 14295574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 20918627 - 20918702
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatatc 74  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||| |||  || ||||| |||||||||||    
T  20918627 gaccgactcatgcagcttagttaaataacaaactgcaacataggcagtatgcaaaccatcatgatataataatatc 20918702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 50614215 - 50614167
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagta 49  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  50614215 gaccgactcatgcagcttagttaataaacaaacagcaacataggcagta 50614167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 50622043 - 50621995
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagta 49  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  50622043 gaccgactcatgcagcttagttaataaacaaacagcaacataggcagta 50621995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 16368384 - 16368338
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcag 47  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||    
T  16368384 gaccgactcatgcagcttagttaataaacaaacagcaacataggcag 16368338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 21754068 - 21754145
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatatcaa 76  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||| |||  || ||||| |||| ||||||||    
T  21754068 gaccgactcatgcagcttagttaaataacaaacaacaacataggcagtatgcaaatcatcatgatataacaatatcaa 21754145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 16758672 - 16758721
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat 50  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  16758672 gaccgactcatgcaacttagttaaataacaaacagcaacataggcagtat 16758721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 22921967 - 22921918
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat 50  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  22921967 gaccgactcatgcagcttagttaaataacaaacaacaacataggcagtat 22921918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 33681030 - 33681079
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat 50  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  33681030 gaccgactcatgcaacttagttaaataacaaacagcaacataggcagtat 33681079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 168 - 224
Target Start/End: Complemental strand, 20847147 - 20847091
Alignment:
Q  168 acagcttcacagattataattaacctcttcattaagtcttaatgctgcccaaaggtt 224  Q
    ||||||||| |||||||  ||||||||||||||||||||||||||| ||||||||||    
T  20847147 acagcttcatagattatggttaacctcttcattaagtcttaatgctacccaaaggtt 20847091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 45574985 - 45574912
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat---acaacaacatgacataataata 72  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||   | |||| |||||||||||||||    
T  45574985 gaccgactcatgcagcttagttaaataac-aacagcaacataggcagtatgcaaaaacagcatgacataataata 45574912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 433032 - 433157
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaacat---gacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| ||||     |||||| ||||||||||||| |||||   |||||||||||||||| | ||| ||| |||||||| |    
T  433032 gaccgactcatgcagcttagttaaataacg----gcaacacaggcagtatacaaaaacatcaagacataataatatcaaatgcaagtcaacaacatctca 433127  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  433128 attattcacatataattcaagtaatgcata 433157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 21840787 - 21840929
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| | |||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  21840787 gaccgactcatgcagcttagttaaataac-aacagcaacaca-gcagtatacaaaaacatcatgacataataatatcaaatgcaagtcaacaacgtctca 21840884  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcaca 141  Q
      ||| || ||||  || |||||||||||| || |||||||||||    
T  21840885 attattcacatataatttaagtaatgcatatataattatatcaca 21840929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 23593877 - 23593735
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  23593877 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctca 23593780  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcaca 141  Q
      ||| || ||||  ||||||||||||||| || |||||||||||    
T  23593779 attattcacatataattcaagtaatgcatatataattatatcaca 23593735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 41050134 - 41050084
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtata 51  Q
    ||||||||||||||||||||||| | ||| |||||||||||||||||||||    
T  41050134 gaccgactcatgcagcttagttactaaacgaacagcaacataggcagtata 41050084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 20847252 - 20847200
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa 54  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||| ||||    
T  20847252 gaccgactcatgcagcttagttaaataac-aacagcaacataggcagtacacaa 20847200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 22237650 - 22237746
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatct 95  Q
    |||||||||||| ||||||||||| ||||||||||| ||||||||| ||| |||  || ||||| |||| |||||| | | ||| ||||||||||||    
T  22237650 gaccgactcatgaagcttagttaaataacaaacagcgacataggcattatgcaaatcatcatgatataacaatatcgaatgcaagtcatcaacatct 22237746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 52928068 - 52928019
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat 50  Q
    |||||||||||||||||||||||| ||||||||| |||||||| ||||||    
T  52928068 gaccgactcatgcagcttagttaaataacaaacaacaacatagacagtat 52928019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 22123210 - 22123133
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaa---catgacataataatatcaa 76  Q
    |||||||||||||||||||||||| || |||||||||||| |  |||||||||| ||   |||||||||||||||||||    
T  22123210 gaccgactcatgcagcttagttaaatagcaaacagcaacaca-acagtatacaaaaatagcatgacataataatatcaa 22123133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 26064961 - 26065009
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagta 49  Q
    |||| ||||||||||||||||| || |||||||||||||||||||||||    
T  26064961 gaccaactcatgcagcttagttgataaacaaacagcaacataggcagta 26065009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 13988886 - 13989013
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  13988886 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctca 13988983  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  13988984 attattcacatataattcaagtaatgcata 13989013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 21923433 - 21923306
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  21923433 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctca 21923336  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  21923335 attattcacatataattcaagtaatgcata 21923306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 29776708 - 29776835
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| |  ||||||||   || ||||||||||||||||||||| | ||| ||| |||| ||| |    
T  29776708 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaataacatgacataataatatcaaatgcaagtcaacaacgtctca 29776805  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  29776806 attattcacatataattcaagtaatgcata 29776835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 50686634 - 50686681
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagt 48  Q
    ||||||||||||||| ||||||||| ||||||| ||||||||||||||    
T  50686634 gaccgactcatgcagtttagttaataaacaaacggcaacataggcagt 50686681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 16093983 - 16093933
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtata 51  Q
    |||||||||||||| | |||||||| |||||| ||||||||||||||||||    
T  16093983 gaccgactcatgcaacatagttaataaacaaatagcaacataggcagtata 16093933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 20454651 - 20454606
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcag 47  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||    
T  20454651 gaccgactcatgcagcttagttaaataac-aacagcaacataggcag 20454606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 15860151 - 15860078
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatat 73  Q
    |||||||||||||||||||||||| |||| |||||| ||| | |||||||||   |||||||||||||||||||||    
T  15860151 gaccgactcatgcagcttagttaaataac-aacagcgacaca-gcagtatacaaaaacaacatgacataataatat 15860078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 20248302 - 20248351
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat 50  Q
    |||||||||||||| |||||||||  |||||||| |||||||||||||||    
T  20248302 gaccgactcatgcaacttagttaaaaaacaaacaacaacataggcagtat 20248351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 21475229 - 21475102
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||| ||||||||||||||||||| |||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  21475229 gaccaactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctca 21475132  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  21475131 attattcacatataattcaagtaatgcata 21475102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 145; Significance: 2e-76; HSPs: 72)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 20698533 - 20698296
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||   |||| |||||||||||||| ||||||||||||||||||    
T  20698533 gaccgactcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatctta 20698435  T
Q  98 tgtatacaaatattcttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttc 197  Q
    | ||| ||||||||||||||||||||||||| ||||||||||||||||||||| |  ||||| |||||  |||||||||||||||||||||||| || ||    
T  20698434 tatattcaaatattcttcaagtaatgcataaacattatatcacatcataatcaacttcaacacatcttgaacagcttcacagattataattaacatcatc 20698335  T
Q  198 attaagtcttaatgctgcccaaaggttcaactctcgaca 236  Q
    ||||||||||||| ||  |||||||||||||||||||||    
T  20698334 attaagtcttaattctatccaaaggttcaactctcgaca 20698296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 13442297 - 13442535
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa---caacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||||| | ||||||||||||||||||||   |||||||||||||||||||||||| ||||||||||||||||||    
T  13442297 gaccgactcatgcagcttagttaaataacaa-cggcaacataggcagtatacaaaaacaacatgacataataatatcaattgcaattcatcaacatctta 13442395  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctctt 196  Q
      ||| |||||||||||||||||||||| | | ||||||||||||||||||||| || ||||| |||||| |||||||||||||||||||||||| || |    
T  13442396 aatattcaaatattcttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacatcat 13442495  T
Q  197 cattaagtcttaatgctgcccaaaggttcaactctcgaca 236  Q
    |||||||||||||||    || ||||||||||||||||||    
T  13442496 cattaagtcttaatgtcatcccaaggttcaactctcgaca 13442535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 17487879 - 17488117
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||||| |||||| |||| |||||||||| ||||   ||||||||||||||||||| ||||||||||||||||||    
T  17487879 gaccgactcatgcagcttagttaaataacaa-cagcaaaatagacagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatctta 17487977  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctctt 196  Q
      ||| |||||||||||||||||||||||| | ||||||||||||||||||||| || ||||| |||||| |||| ||||||||||||||||||| || |    
T  17487978 aatattcaaatattcttcaagtaatgcatataacattatatcacatcataatcaacatcaacacatcttaaacagattcacagattataattaacatcat 17488077  T
Q  197 cattaagtcttaatgctgcccaaaggttcaactctcgaca 236  Q
    |||||||||||||||||  || ||||||||||||||||||    
T  17488078 cattaagtcttaatgctatcccaaggttcaactctcgaca 17488117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 17499361 - 17499599
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||||| |||||| |||| |||||||||| ||||   ||||||||||||||||||| ||||||||||||||||||    
T  17499361 gaccgactcatgcagcttagttaaataacaa-cagcaaaatagacagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatctta 17499459  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctctt 196  Q
      ||| |||||||||||||||||||||||| | ||||||||||||||| ||||| || ||||| |||||| |||| |||||| |||||||||||| || |    
T  17499460 aatattcaaatattcttcaagtaatgcatataacattatatcacatcaaaatcaacatcaacacatcttaaacagattcacaaattataattaacatcat 17499559  T
Q  197 cattaagtcttaatgctgcccaaaggttcaactctcgaca 236  Q
    |||||||||||||||||  || ||||||||||||||||||    
T  17499560 cattaagtcttaatgctatcccaaggttcaactctcgaca 17499599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 12399232 - 12399456
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa---caacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||   || ||||||||||||||||||| | ||||||| ||||||||||    
T  12399232 gaccgactcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaatcagcatgacataataatatcaaatgcaattcaacaacatctta 12399330  T
Q  98 tgtatacaaatattcttcaagtaatgcataat-cattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctctt 196  Q
      ||| |||||| |  |||||||||||||||  ||||||||||||||||||||| |||||||| |||||| | |||||||||||||||| ||||||||||    
T  12399331 aatattcaaataattctcaagtaatgcataagacattatatcacatcataatcaacaacaacacatcttaaatagcttcacagattatagttaacctctt 12399430  T
Q  197 cattaagtcttaatgctgcccaaagg 222  Q
    ||||| ||||||||||| ||||||||    
T  12399431 cattatgtcttaatgctacccaaagg 12399456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 14576930 - 14576697
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtata--caacaacatgacataataatatcaatttcaattcatcaacatcttat 98  Q
    ||||||||||| || ||||||||| |||||| ||||||||||| |||||||  ||||| ||||||||||||||||||||| ||| ||| ||||||||||     
T  14576930 gaccgactcattcaacttagttaaataacaa-cagcaacatagacagtataaacaacagcatgacataataatatcaattgcaagtcaacaacatcttaa 14576832  T
Q  99 gtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttc 197  Q
     ||| ||| ||| |||||||||||||||| | ||||||||||||||||||||| || ||||| |||||| ||| |||||||||||||||||||| || ||    
T  14576831 atattcaattatacttcaagtaatgcatataacattatatcacatcataatcaacatcaacacatcttaaacaacttcacagattataattaacatcatc 14576732  T
Q  198 attaagtcttaatgctgcccaaaggttcaactctc 232  Q
    ||||| ||||||| || ||| ||||||||||||||    
T  14576731 attaaatcttaatactaccccaaggttcaactctc 14576697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 14972877 - 14973110
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||||| |||||||| ||||||||||||| ||||   ||||||||||||||||| | ||| ||| |||||||| |    
T  14972877 gaccgactcatgcagcttagttaaataacaa-cagcaacacaggcagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacatctca 14972975  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctctt 196  Q
    | ||||||   ||  ||||||||||||||| | ||||||||||||||||||||| || ||||| |||||| ||||||||| |||||||||||||| || |    
T  14972976 tatatacattcataattcaagtaatgcatataacattatatcacatcataatcaacatcaacacatcttaaacagcttcatagattataattaacatcat 14973075  T
Q  197 cattaagtcttaatgctgcccaaaggttcaactct 231  Q
    |||||||||| ||| || ||| |||||||||||||    
T  14973076 cattaagtctcaatactaccccaaggttcaactct 14973110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 26686910 - 26687144
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||||| || ||||||||||||||||||| ||||   ||||||||||||||||||| ||| ||| || |||||||    
T  26686910 gaccgactcatgcagcttagttaaataacaa-caacaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcaacatcatctta 26687008  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctctt 196  Q
      ||| | | ||| |||||||||||||| | | |||||||||||| |||||||| || ||||| |||||| |||||||||||||||||||||||| || |    
T  26687009 aatattccattatacttcaagtaatgcacataacattatatcacaacataatcaacatcaacacatcttaaacagcttcacagattataattaacatcct 26687108  T
Q  197 cattaagtcttaatgctgcccaaaggttcaactctc 232  Q
    |||||||||  ||| || ||| || |||||||||||    
T  26687109 cattaagtcccaatactaccccaaagttcaactctc 26687144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 23083459 - 23083226
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||||||||| ||||   ||||||||||||||||||| ||| ||| ||||||||||    
T  23083459 gaccgactcatgcagcttagttaaataacaat-agcaacataggcagtatacaaaaacagaatgacataataatatcaattgcaagtcaacaacatctta 23083361  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctctt 196  Q
      ||| ||| | | |||| ||||||||| | | |||||||||||||||||||||  | ||||| |||||| ||||||||||||||| |||||||| || |    
T  23083360 aatattcaattttacttctagtaatgcacataacattatatcacatcataatcaatatcaacacatcttaaacagcttcacagattgtaattaacatcat 23083261  T
Q  197 cattaagtcttaatgctgcccaaaggttcaactct 231  Q
    || ||||||||||| || ||  |||||||||||||    
T  23083260 cactaagtcttaatactacctcaaggttcaactct 23083226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 14572612 - 14572845
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatcttat 98  Q
    |||||||||||||||||||||||| |||||| ||||||||||| ||||||||||  || |||||||||||||||||||||   | ||| ||||||||||     
T  14572612 gaccgactcatgcagcttagttaaataacaa-cagcaacatagacagtatacaaaacagcatgacataataatatcaattgagagtcaacaacatcttaa 14572710  T
Q  99 gtatacaaatattcttcaagtaatgcataat-cattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttc 197  Q
     ||| ||| ||| |||||| ||||| | ||  |||||||||||||||||| || ||  |||| |||||| ||| ||||||| |||||||||||| || ||    
T  14572711 atattcaattatacttcaaataatgaaaaaaacattatatcacatcataaacaacataaacaaatcttaaacaacttcacaaattataattaacatcatc 14572810  T
Q  198 attaagtcttaatgctgcccaaaggttcaactctc 232  Q
    ||||||||||||| || ||| ||||||||||||||    
T  14572811 attaagtcttaatactaccccaaggttcaactctc 14572845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 18438557 - 18438787
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||| ||||||||||| |||||| |||||||||||||||||||||| ||||   ||| ||||||||||||| | ||| ||| |||||||||     
T  18438557 gaccgactcatgtagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgatataataatatcaaatgcaagtcaacaacatcttt 18438655  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctctt 196  Q
    | ||||||   ||   |||||||||||||| | ||||||||||||||||| ||| || ||||| |||||| |||||||||||||||||| ||||| || |    
T  18438656 tttatacattcatatctcaagtaatgcatataacattatatcacatcatattcaacatcaacacatcttaaacagcttcacagattatagttaacatcat 18438755  T
Q  197 cattaagtcttaatgctgcccaaaggttcaac 228  Q
    |||||||||| ||| || ||| ||||||||||    
T  18438756 cattaagtctcaatactaccccaaggttcaac 18438787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 2 - 205
Target Start/End: Original strand, 43840956 - 43841162
Alignment:
Q  2 accgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatcttat 98  Q
    ||||||||||||||||||||||| |||||| || |||||||| |||||||||| ||||   ||||||||||||||||||| ||| ||| || |||||||     
T  43840956 accgactcatgcagcttagttaaataacaa-caacaacatagacagtatacaaaaacagcatgacataataatatcaattgcaagtcaacatcatcttaa 43841054  T
Q  99 gtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttc 197  Q
     ||| ||| ||| |||||||||||||| | | |||||||||||| |||||||| || ||||| |||||| |||||||||||||||||||||||| || ||    
T  43841055 atattcaattatacttcaagtaatgcacataacattatatcacaacataatcaacatcaacacatcttaaacagcttcacagattataattaacatcctc 43841154  T
Q  198 attaagtc 205  Q
     |||||||    
T  43841155 gttaagtc 43841162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 25476483 - 25476249
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||| |||||||||||  ||||| |||||||| ||| ||||||||| ||||   ||||||||||||||||| | ||| ||| |||||||| |    
T  25476483 gaccgactcatgtagcttagttaaaaaacaa-cagcaacacaggtagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacatctca 25476385  T
Q  98 tgtatacaaatattcttcaagtaatgc--ataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctct 195  Q
     |||||||   ||  ||||||||||||  |||| |||||||||||||||| ||||||| ||||| |||||| ||||||||||||||| |||||||| ||     
T  25476384 agtatacattcataattcaagtaatgcgcataa-cattatatcacatcattatcatcatcaacacatcttaaacagcttcacagattgtaattaacatcc 25476286  T
Q  196 tcattaagtcttaatgctgcccaaaggttcaactctc 232  Q
    ||||||||||| ||| || ||  ||||||||||||||    
T  25476285 tcattaagtctcaatactacctcaaggttcaactctc 25476249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 24153306 - 24153115
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatcttat 98  Q
    |||||||||||||||||||||||| |||| |  ||||||||||| |||||||||  || ||||||||||||||||||| | ||| ||| ||||||||||     
T  24153306 gaccgactcatgcagcttagttaaataacgat-agcaacataggtagtatacaaaacagcatgacataataatatcaaatgcaagtcaacaacatcttaa 24153208  T
Q  99 gtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaa 190  Q
     ||| ||| ||| |||||| ||||||| | | ||| ||||||||||||||||| || ||||| |||||| |||||||||||||||||||||||    
T  24153207 atattcaattatacttcaaataatgcacataacataatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaa 24153115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 114 - 231
Target Start/End: Original strand, 16796685 - 16796803
Alignment:
Q  114 tcaagtaatgcataat-cattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaatgc 212  Q
    |||||||||||||||  |||||||||||||||||||||  ||||||| |||||| ||| ||||||| |||||||||| ||||||||||||||||||||||    
T  16796685 tcaagtaatgcataaaacattatatcacatcataatcaaaaacaacacatcttaaacaacttcacatattataattagcctcttcattaagtcttaatgc 16796784  T
Q  213 tgcccaaaggttcaactct 231  Q
    | |||||||||||||||||    
T  16796785 tacccaaaggttcaactct 16796803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 40213818 - 40213585
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtataca---acaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||| ||||||||||| |||||| || ||||| || |||||||||   ||| ||||||||||||||||||| | ||| ||| |||||||| |    
T  40213818 gaccgactcatgtagcttagttaaataacaa-catcaacacag-cagtatacataaacatcatgacataataatatcaaatgcaagtcaacaacatctca 40213721  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctctt 196  Q
      ||||||   ||  | |||||||||| || | ||||||||||||||||||||| || ||||| |||||| ||||||| |||||||||||||||| || |    
T  40213720 attatacattcataatccaagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaacagctttacagattataattaacatcat 40213621  T
Q  197 cattaagtcttaatgctgcccaaaggttcaactctc 232  Q
    |||||||||| ||| || ||| |||||| |||||||    
T  40213620 cattaagtctcaatactaccccaaggttaaactctc 40213585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 5 - 232
Target Start/End: Complemental strand, 11424853 - 11424627
Alignment:
Q  5 gactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatcttatgtat 102  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||||  || |||||||||| |||||||||  |||   |||||||||| |  |||    
T  11424853 gactcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaacagcatgacataacaatatcaatagcaa---atcaacatctcaattat 11424758  T
Q  103 acaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcatta 201  Q
     ||   ||  |||||||||||| || | |||||||||||||||||| || |  ||||| |||||| |||||||||||||||| ||||||| ||  |||||    
T  11424757 gcattcataattcaagtaatgcgtataacattatatcacatcataaacaacttcaacacatcttaaacagcttcacagattaaaattaacatcaacatta 11424658  T
Q  202 agtcttaatgctgcccaaaggttcaactctc 232  Q
    ||||| ||| || ||| || |||||||||||    
T  11424657 agtctcaatactaccccaaagttcaactctc 11424627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 42386433 - 42386627
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    ||||||||||||||| |||||||| |||||| ||||||||||||||||||||   |||| |||||||||| |||||||| | ||| ||| |||||||| |    
T  42386433 gaccgactcatgcagtttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacataacaatatcaaatgcaagtcaacaacatctca 42386531  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatctt-atacagcttcacagattataattaac 191  Q
      ||| ||   ||  |||||| |||||||| | ||||||||||||||||||||| || ||| | ||||| | ||||||||||||||||| ||||||    
T  42386532 aatattcattcataattcaagcaatgcatataacattatatcacatcataatcaacatcaaaacatcttaaaacagcttcacagattatcattaac 42386627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 114 - 196
Target Start/End: Original strand, 14179570 - 14179653
Alignment:
Q  114 tcaagtaatgcataat-cattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctctt 196  Q
    |||||||||||||||  ||||||||||||||||||||| |||||||| |||||| |||||||||||||||||||||||| ||||    
T  14179570 tcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacagattataattaacttctt 14179653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 51 - 236
Target Start/End: Original strand, 30029915 - 30030100
Alignment:
Q  51 acaacaacatgacataataatatcaatttcaattcatcaacatcttatgtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatc 149  Q
    |||||| |||||||||| ||||||| || ||||||| |||| |||||  ||| |||  |  |||||||||||| | | | ||||||||||||||||||||    
T  30029915 acaacagcatgacataagaatatcatttgcaattca-caacgtcttaaatattcaataaaacttcaagtaatgtacacaacattatatcacatcataatc 30030013  T
Q  150 atcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaatgctgcccaaaggttcaactctcgaca 236  Q
    |    ||| | |||||| ||||||||||| |||||| | ||| || |||||||||||||| ||| ||||||||||||||||||||||    
T  30030014 aatgtcaaaacatcttaaacagcttcacatattatattaaacatcatcattaagtcttaaagctacccaaaggttcaactctcgaca 30030100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 12174357 - 12174308
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat 50  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  12174357 gaccgactcatgcagcttagttaaataacaaacagcaacataggcagtat 12174308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 15470947 - 15471043
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatct 95  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||| |||  || ||||| |||| |||||| | | ||| ||||||||||||    
T  15470947 gaccgactcatgcagcttagttaaataacagacagcaacataggcagtatgcaaatcatcatgatataacaatatcgaatgcaagtcatcaacatct 15471043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 32307700 - 32307749
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat 50  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  32307700 gaccgactcatgcagcttagttaaataacaaacagcaacataggcagtat 32307749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 49668174 - 49668125
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat 50  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  49668174 gaccgactcatgcagcttagttaaataacaaacagcaacataggcagtat 49668125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 4 - 146
Target Start/End: Original strand, 856162 - 856304
Alignment:
Q  4 cgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaaca-tgac-ataataatatcaatttcaattcatcaacatcttatgta 101  Q
    ||||||||||| ||||||| | ||||||  ||||||||||||||  |||||||||| | |  ||||| ||| ||||| ||||||| ||||||||||||||    
T  856162 cgactcatgcaacttagttgaataacaat-agcaacataggcagattacaacaacaatcatgataattataccaatt-caattcaacaacatcttatgta 856259  T
Q  102 tacaaatattcttcaagtaatgcataatcattatatcacatcata 146  Q
    ||||| || |||||||||||| ||||| |||||||  ||||||||    
T  856260 tacaattaatcttcaagtaatacataaacattataatacatcata 856304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 13210425 - 13210350
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatatc 74  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||| |||  || ||||| |||||||||||    
T  13210425 gaccgactcatgcagcttagttaaataacaaatagcaacataggcagtatgcaaaccatcatgatataataatatc 13210350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 22110450 - 22110402
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagta 49  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  22110450 gaccgactcatgcagcttagttaataaacaaacagcaacataggcagta 22110402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 24340817 - 24340746
Alignment:
Q  5 gactcatgcagcttagttaattaacaaacagcaacataggcagtat--acaacaacatgacataataatatc 74  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||  |||||| ||||| |||||||||||    
T  24340817 gactcatgcagcttagttaattaacaatcagcaacatatgcagtatgcacaacatcatgatataataatatc 24340746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 43925981 - 43926029
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagta 49  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  43925981 gaccgactcatgcagcttagttaataaacaaacagcaacataggcagta 43926029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 37251266 - 37251216
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtata 51  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  37251266 gaccgagtcatgcagcttagttaataaacaaacagcaacataggcagtata 37251216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 50242842 - 50242984
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| | | |||||||   |||||||||||||||||||||||| | ||| ||| |||| ||| |    
T  50242842 gaccgactcatgcagcttagttaaataac-aacagcaacaca-gtagtatacaaaaacaacatgacataataatatcaaatgcaaatcaacaacgtctca 50242939  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcaca 141  Q
      ||| || ||||  ||||||||||||||| || |||||||||||    
T  50242940 attattcacatataattcaagtaatgcatatataattatatcaca 50242984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 606423 - 606378
Alignment:
Q  2 accgactcatgcagcttagttaattaacaaacagcaacataggcag 47  Q
    |||||||||||||||||||||||| |||||||||||||||||||||    
T  606423 accgactcatgcagcttagttaataaacaaacagcaacataggcag 606378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 9512943 - 9512992
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat 50  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  9512943 gaccgactcatgcagcttagttaaacaacaaacagcaacataggcagtat 9512992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 9520918 - 9520967
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat 50  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  9520918 gaccgactcatgcagcttagttaaacaacaaacagcaacataggcagtat 9520967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 27165270 - 27165366
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat--acaacaacatgacataataatatcaatttcaattcatcaacatct 95  Q
    |||||||||||||||||||||||| ||||||||||||| |||| ||||||  | |||||||||| |||  |||||||| | ||| ||||||| ||||    
T  27165270 gaccgactcatgcagcttagttaaataacaaacagcaatatagacagtatgcaaaacaacatgatataccaatatcaaatgcaagtcatcaatatct 27165366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 52523827 - 52523778
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat 50  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  52523827 gaccgactcatgcagcttagttaaataacaaacaacaacataggcagtat 52523778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 23274714 - 23274785
Alignment:
Q  5 gactcatgcagcttagttaattaacaaacagcaacataggcagtat--acaacaacatgacataataatatc 74  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||  | |||| ||||| |||||||||||    
T  23274714 gactcatgcaacttagttaattaacaatcagcaacataggcagtatgcaaaacatcatgatataataatatc 23274785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 9707749 - 9707622
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| | |||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  9707749 gaccgactcatgcagcttagttaaataac-aacagcaacaca-gcagtatacaaaaacagcatgacataataatatcaaatacaagtcaacaacgtctca 9707652  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  9707651 attattcacatataattcaagtaatgcata 9707622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 29172725 - 29172598
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| | |||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  29172725 gaccgactcatgcagcttagttaaataac-aacagcaacaca-gcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctca 29172628  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  29172627 attattcacatataattcaagtaatgcata 29172598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 53070795 - 53070668
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| ||||||||||||  ||||||||   ||||||| |||||||||||||||| | ||| ||| |||| ||| |    
T  53070795 gaccgactcatgcagcttagttaaataac-aacagcaacata-acagtatacaaaaacaacaagacataataatatcaaatgcaagtcaacaacgtctca 53070698  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  53070697 attattcacatataattcaagtaatgcata 53070668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 12377944 - 12377994
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtata 51  Q
    ||||||||||| |||||||||||||  ||||||||||||||||||||||||    
T  12377944 gaccgactcatacagcttagttaatagacaaacagcaacataggcagtata 12377994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 12567580 - 12567722
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| | ||| |||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  12567580 gaccgactcatgcagcttagttaaataac-aacagcaacaca-gcaatatacaaaaacatcatgacataataatatcaaatgcaagtcaacaacgtctca 12567677  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcaca 141  Q
      ||| || ||||  ||||||||||||||| || |||||||||||    
T  12567678 attattcacatataattcaagtaatgcatatataattatatcaca 12567722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 13544045 - 13544187
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| | ||| |||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  13544045 gaccgactcatgcagcttagttaaataac-aacagcaacaca-gcaatatacaaaaacatcatgacataataatatcaaatgcaagtcaacaacgtctca 13544142  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcaca 141  Q
      ||| || ||||  ||||||||||||||| || |||||||||||    
T  13544143 attattcacatataattcaagtaatgcatatataattatatcaca 13544187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 17672646 - 17672788
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||| ||||||| |||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  17672646 gaccgactcatgcagcttagttaaataac-aacaacaacata-gcagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctca 17672743  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcaca 141  Q
      ||| || ||||  ||||| ||||||||| || |||||||||||    
T  17672744 attattcacatataattcaaataatgcatatataattatatcaca 17672788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 28194713 - 28194755
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacatag 43  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  28194713 gaccgactcatgcagcttagttaaataacaaacagcaacatag 28194755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 53301649 - 53301572
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat--acaacaacatgacataataatatcaa 76  Q
    ||||||||||| || ||||||||| |||||||||||||||||| ||||||  | |||||||||| |||| ||||||||    
T  53301649 gaccgactcatacaacttagttaaataacaaacagcaacatagacagtatgcaaaacaacatgatataacaatatcaa 53301572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 14234517 - 14234605
Alignment:
Q  8 tcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatc 94  Q
    ||||||||||||||||| |||||| |||||||||||||||||| |||  || ||||| |||| |||||| | | ||| |||||||||||    
T  14234517 tcatgcagcttagttaaataacaagcagcaacataggcagtatgcaaatcatcatgatataacaatatcgaatgcaagtcatcaacatc 14234605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 16097351 - 16097396
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggca 46  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||    
T  16097351 gaccgactcatgcagcttagttaaataacaaacaacaacataggca 16097396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 16103803 - 16103852
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat 50  Q
    ||||||||||||||||||||||||  ||| ||||||||||||||||||||    
T  16103803 gaccgactcatgcagcttagttaaacaacgaacagcaacataggcagtat 16103852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 36166618 - 36166712
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac--aacaacatgacataataatatcaatttcaattcatcaacatct 95  Q
    |||||||||||||||||||||||| |||| |||||| ||| | |||||||||  |||| ||||||||||||||||||| | ||| ||| ||||||||    
T  36166618 gaccgactcatgcagcttagttaaataac-aacagcgacaca-gcagtatacaaaacagcatgacataataatatcaaatgcaagtcaacaacatct 36166712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 37642363 - 37642288
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat--acaacaacatgacataataatatc 74  Q
    ||||||||||||||||||||||| ||||  | ||||||||||||||||||  | |||| ||||| |||||||||||    
T  37642363 gaccgactcatgcagcttagttagttaatgatcagcaacataggcagtatgcaaaacatcatgatataataatatc 37642288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 43550621 - 43550544
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa---caacatgacataataatatcaa 76  Q
    |||||||||||||||||||||||| |||  | |||||||||| ||||||| |||   ||||||||||||||||||||||    
T  43550621 gaccgactcatgcagcttagttaaataatga-cagcaacatatgcagtatgcaaaaacaacatgacataataatatcaa 43550544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 7781489 - 7781362
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  7781489 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctca 7781392  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  7781391 attattcacatataattcaagtaatgcata 7781362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 8899114 - 8899241
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  8899114 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctca 8899211  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  8899212 attattcacatataattcaagtaatgcata 8899241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 17463198 - 17463325
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  17463198 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctca 17463295  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  17463296 attattcacatataattcaagtaatgcata 17463325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 28848753 - 28848626
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  28848753 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctca 28848656  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  28848655 attattcacatataattcaagtaatgcata 28848626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 34159346 - 34159473
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  34159346 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctca 34159443  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  34159444 attattcacatataattcaagtaatgcata 34159473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 38962033 - 38961906
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  38962033 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctca 38961936  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  38961935 attattcacatataattcaagtaatgcata 38961906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 45607049 - 45606922
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  45607049 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctca 45606952  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  45606951 attattcacatataattcaagtaatgcata 45606922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 55476511 - 55476638
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  55476511 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctca 55476608  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  55476609 attattcacatataattcaagtaatgcata 55476638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 21618469 - 21618563
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac--aacaacatgacataataatatcaatttcaattcatcaacatct 95  Q
    |||||||||||||||||||||||| |||| |||||| ||| |  ||||||||  |||| ||||||||||||||||||| | ||| ||| ||||||||    
T  21618469 gaccgactcatgcagcttagttaaataac-aacagcgacaca-acagtatacaaaacagcatgacataataatatcaaatgcaagtcaacaacatct 21618563  T

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Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 55500962 - 55501055
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacat 93  Q
    |||||||||||||||||||||||| |||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| ||||||    
T  55500962 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacat 55501055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 6469276 - 6469200
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaa 76  Q
    |||||||||||||||||||||||| |||| |||||||||| |  ||||||||   |||| |||||||||||||||||||    
T  6469276 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaa 6469200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 8499538 - 8499614
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaa 76  Q
    |||||||||||||||||||||||| |||| |||||| ||| | | |||||||   ||||||||||||||||||||||||    
T  8499538 gaccgactcatgcagcttagttaaataac-aacagcgacaca-gtagtatacaaaaacaacatgacataataatatcaa 8499614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 13919352 - 13919399
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagta 49  Q
    ||||||||||||||||||||||||| ||| |||||||||||||| ||||    
T  13919352 gaccgactcatgcagcttagttaataaac-aacagcaacatagggagta 13919399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 127
Target Start/End: Complemental strand, 17446794 - 17446670
Alignment:
Q  4 cgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgt 100  Q
    ||||||||||||||||||||| |||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  |    
T  17446794 cgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaatt 17446697  T
Q  101 atacaaatattcttcaagtaatgcata 127  Q
    || || ||||  |||||||||||||||    
T  17446696 attcacatatcattcaagtaatgcata 17446670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 16454423 - 16454296
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||| ||||||||| |||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  16454423 gaccgactcatgcaacttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctca 16454326  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  16454325 attattcacatataattcaagtaatgcata 16454296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 16282953 - 16282880
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatat 73  Q
    |||||||||||||||||||||||| |||| |||||||||| |  ||||||||   |||| ||||||||||||||||    
T  16282953 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatat 16282880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 12119867 - 12119791
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaa 76  Q
    |||||||||||||||||| ||||| |||| |||||| ||| | |||||||||   |||| |||||||||||||||||||    
T  12119867 gaccgactcatgcagctttgttaaataac-aacagcgacaca-gcagtatacaaaaacagcatgacataataatatcaa 12119791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 13151933 - 13151805
Alignment:
Q  1 gaccgactcatgcagctt-agttaattaacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatctt 96  Q
    |||||||||||||||||| |||||| |||||| |||||||| |  |||||||||| ||||   ||||||||||||||||| | ||| ||| |||| |||     
T  13151933 gaccgactcatgcagctttagttaaataacaa-cagcaacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctc 13151836  T
Q  97 atgtatacaaatattcttcaagtaatgcata 127  Q
    |  ||| || ||||  |||||||||||||||    
T  13151835 aattattcacatataattcaagtaatgcata 13151805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 13154398 - 13154270
Alignment:
Q  1 gaccgactcatgcagctt-agttaattaacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatctt 96  Q
    |||||||||||||||||| |||||| |||||| |||||||| |  |||||||||| ||||   ||||||||||||||||| | ||| ||| |||| |||     
T  13154398 gaccgactcatgcagctttagttaaataacaa-cagcaacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctc 13154301  T
Q  97 atgtatacaaatattcttcaagtaatgcata 127  Q
    |  ||| || ||||  |||||||||||||||    
T  13154300 aattattcacatataattcaagtaatgcata 13154270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 15412449 - 15412525
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaa 76  Q
    |||||||||||||||||||||||| |||| |||||| ||| | | |||||||   |||| |||||||||||||||||||    
T  15412449 gaccgactcatgcagcttagttaaataac-aacagcgacaca-gtagtatacaaaaacagcatgacataataatatcaa 15412525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 144; Significance: 7e-76; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 51605 - 51840
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaacatgacataataatatcaatttcaattcatcaacatcttatgt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||| ||| |||||||||||||||||||||||    
T  51605 gaccgactcatgcagcttagttaaataacaaacagcaacataggcagtatacaacatcatgacataattataacaaattcaattcatcaacatcttatgt 51704  T
Q  101 atacaaatattcttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcatt 200  Q
    |||||||||| ||||||| ||||||||| ||||||| ||| ||||| ||| |||||||||||||||| ||||||||||||||||| ||||||||    ||    
T  51705 atacaaatatccttcaagaaatgcataaacattataacacttcatattcaacaacaacatatcttattcagcttcacagattatagttaacctcactctt 51804  T
Q  201 aagtcttaatgctgcccaaaggttcaactctcgaca 236  Q
    |||||||||| || ||||| ||| ||| ||||||||    
T  51805 aagtcttaatcctacccaagggtccaattctcgaca 51840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 143; Significance: 3e-75; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 21293067 - 21292830
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa-caacatgacataataatatcaat-ttcaa-ttcatcaacatctta 97  Q
    |||||| ||||||||||||||||| |||||| ||||||||||||||||| |||| ||  ||||||||||||||||||| ||||| |||||||||||||||    
T  21293067 gaccgattcatgcagcttagttaaataacaa-cagcaacataggcagtaaacaaacagtatgacataataatatcaatattcaaattcatcaacatctta 21292969  T
Q  98 tgtatacaaatattcttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttc 197  Q
     |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |     
T  21292968 ggtatacaattattcttcaagtaatgcataaacattatatcacatcataatcatcaacaacatatcttatacaacttcacagattataattaacctcatt 21292869  T
Q  198 attaagtcttaatgctgcccaaaggttcaactctcgaca 236  Q
    ||||||||||||| || ||||| ||| |||||| |||||    
T  21292868 attaagtcttaatcctacccaagggtccaactcccgaca 21292830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 23390594 - 23390356
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa---caacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||||| ||||||||||| ||||||||||   |||||||||||||||||||||||| ||||||||||||||||||    
T  23390594 gaccgactcatgcagcttagttaaataacaa-cagcaacatagacagtatacaaaaacaacatgacataataatatcaattgcaattcatcaacatctta 23390496  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctctt 196  Q
      ||| |||||||||||||||||||||| | | ||||||||||||||||||||| || ||||| |||||| | |||||||||||||||||||||| || |    
T  23390495 aatattcaaatattcttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaatagcttcacagattataattaacatcct 23390396  T
Q  197 cattaagtcttaatgctgcccaaaggttcaactctcgaca 236  Q
    |||||||||||||| ||  || ||||||||||||||||||    
T  23390395 cattaagtcttaatactatcccaaggttcaactctcgaca 23390356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 22075042 - 22075268
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa---caacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    ||||||||||| |||||||||||| |||||| |||||||||||| |||||||||   |||||||||||||||||||||||| ||||||| ||||||||||    
T  22075042 gaccgactcattcagcttagttaaataacaa-cagcaacataggaagtatacaaaatcaacatgacataataatatcaattgcaattcaacaacatctta 22075140  T
Q  98 tgtatacaaatattcttcaagtaatgcataat-cattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctctt 196  Q
      ||| |||||| |  |||||||||||||||  ||||||||||||||||||||| |||||||| |||||| ||||||||||| |||||||||||||||||    
T  22075141 aatattcaaataattctcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacatattataattaacctctt 22075240  T
Q  197 cattaagtcttaatgctgcccaaaggtt 224  Q
    ||||||||||||||||| ||||||||||    
T  22075241 cattaagtcttaatgctacccaaaggtt 22075268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 8286941 - 8286706
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaa----catgacataataatatcaatttcaattcatcaacatctt 96  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||| ||    ||||||||||||||||||||| |||||||||||||||||    
T  8286941 gaccgactcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaaacagcatgacataataatatcaattgcaattcatcaacatctt 8286843  T
Q  97 atgtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctct 195  Q
    |  ||  |||| ||||||||||||||||| | | ||||||||||||||||||||| || ||||| |||||| ||||||||||| | |||||||||| |||    
T  8286842 aaataatcaaacattcttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacataatataattaacatct 8286743  T
Q  196 tcattaagtcttaatgctgcccaaaggttcaactctc 232  Q
    ||||||||||||||| || ||||||||||||||||||    
T  8286742 tcattaagtcttaatactacccaaaggttcaactctc 8286706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 25421555 - 25421789
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa---caacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||||| || |||||||||||||||||||   |||||||||||||||||||||||| ||| ||| || |||||||    
T  25421555 gaccgactcatgcagcttagttaaataacaa-caacaacataggcagtatacaaaaacaacatgacataataatatcaattgcaagtcaacagcatctta 25421653  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctctt 196  Q
      ||| ||| ||| |||||||||||||| | | ||||||||||||||||||||| || ||||  |||||| |||||||||||||||||||||||| || |    
T  25421654 aatattcaattatacttcaagtaatgcacataacattatatcacatcataatcaacatcaacgcatcttaaacagcttcacagattataattaacatcat 25421753  T
Q  197 cattaagtcttaatgctgcccaaaggttcaactctc 232  Q
    |||||||||| |||||| ||| ||||||||||||||    
T  25421754 cattaagtctcaatgctaccccaaggttcaactctc 25421789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 25431417 - 25431651
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa---caacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||| ||||||||| |||||| ||||||||||||||||||||||   |||||||||||||||||||||||| ||| ||| ||||||||||    
T  25431417 gaccgactcatgcatcttagttaaataacaa-cagcaacataggcagtatacaaaaacaacatgacataataatatcaattgcaagtcaacaacatctta 25431515  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctctt 196  Q
      | | ||| ||| |||||||||||||| | | ||||||||||||||||||||| || ||||  |||||| |||||||||||||||||||||||| || |    
T  25431516 aatgttcaattatacttcaagtaatgcacataacattatatcacatcataatcaacatcaacgcatcttaaacagcttcacagattataattaacatcat 25431615  T
Q  197 cattaagtcttaatgctgcccaaaggttcaactctc 232  Q
    |||||||||| |||||| ||  ||||||||||||||    
T  25431616 cattaagtctcaatgctacctcaaggttcaactctc 25431651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 24493592 - 24493825
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatcttat 98  Q
    |||||||||||||||||| ||||| ||||||  |||||||||||||||||||||  || ||||||||||||||||||| | ||| ||| ||||||||||     
T  24493592 gaccgactcatgcagcttggttaagtaacaat-agcaacataggcagtatacaaaacagcatgacataataatatcaaatgcaagtcaacaacatcttaa 24493690  T
Q  99 gtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttc 197  Q
     ||| ||| ||| |||||||| ||||| | | ||||||||||||||||||||| || |||||||||||| | |||||||||||||||||||||| || |     
T  24493691 atattcaattatacttcaagtgatgcacataacattatatcacatcataatcaacatcaacatatcttaaatagcttcacagattataattaacatcatt 24493790  T
Q  198 attaagtcttaatgctgcccaaaggttcaactctc 232  Q
    ||||||||||||| || ||| ||||||||||||||    
T  24493791 attaagtcttaatactaccccaaggttcaactctc 24493825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 13025334 - 13025567
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatcttat 98  Q
    |||||||||||||||| ||||||| ||||||  |||||||||||||||||||||  || ||||||||| | ||||||| | ||| ||| ||||||||||     
T  13025334 gaccgactcatgcagcatagttaaataacaat-agcaacataggcagtatacaaaacagcatgacatattgatatcaaatgcaagtcaacaacatcttaa 13025432  T
Q  99 gtatacaaatattcttcaagtaatg--cataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctctt 196  Q
     ||| ||| ||| |||||| |||||  ||||| |||||||||||||| |||||| || |||||||||||| ||| ||||||| |||||||||||| || |    
T  13025433 atattcaattatacttcaaataatgtacataa-cattatatcacatcgtaatcaacatcaacatatcttaaacaacttcacatattataattaacatcat 13025531  T
Q  197 cattaagtcttaatgctgcccaaaggttcaactctc 232  Q
    |||||||||||||| || ||| ||||||||||||||    
T  13025532 cattaagtcttaatactaccccaaggttcaactctc 13025567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 13095518 - 13095751
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatcttat 98  Q
    |||||||||||||||| ||||||| ||||||  |||||||||||||||||||||  || ||||||||| | ||||||| | ||| ||| ||||||||||     
T  13095518 gaccgactcatgcagcatagttaaataacaat-agcaacataggcagtatacaaaacagcatgacatattgatatcaaatgcaagtcaacaacatcttaa 13095616  T
Q  99 gtatacaaatattcttcaagtaatg--cataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctctt 196  Q
     ||| ||| ||| |||||| |||||  ||||| |||||||||||||| |||||| || |||||||||||| ||| ||||||| |||||||||||| || |    
T  13095617 atattcaattatacttcaaataatgtacataa-cattatatcacatcgtaatcaacatcaacatatcttaaacaacttcacatattataattaacatcat 13095715  T
Q  197 cattaagtcttaatgctgcccaaaggttcaactctc 232  Q
    |||||||||||||| || ||| ||||||||||||||    
T  13095716 cattaagtcttaatactaccccaaggttcaactctc 13095751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 9 - 228
Target Start/End: Original strand, 9077983 - 9078205
Alignment:
Q  9 catgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtataca 105  Q
    |||||||||||||||| |||||| ||||||||||||||||||||   |||| ||||||||||||||||||| | ||| ||| |||||||| |  ||||||    
T  9077983 catgcagcttagttaaataacaa-cagcaacataggcagtatacgaaaacagcatgacataataatatcaagtgcaagtcaacaacatctcaattataca 9078081  T
Q  106 aatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagt 204  Q
       ||   ||||||||||| || | ||||||||||||||||||||| || ||||| |||||| |||||||||||||||||||||||| || |||||||||    
T  9078082 ttcataactcaagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacatcatcattaagt 9078181  T
Q  205 cttaatgctgcccaaaggttcaac 228  Q
    || ||| || ||| ||||||||||    
T  9078182 ctcaatactaccccaaggttcaac 9078205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 24529243 - 24529477
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa---caacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||||| || |||||||||||||||||||   |||||||||||||| ||||||| | ||| ||| ||||||||||    
T  24529243 gaccgactcatgcagcttagttaaataacaa-caacaacataggcagtatacaaaaacaacatgacataatgatatcaaatgcaagtcaacaacatctta 24529341  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctctt 196  Q
      ||||||   ||   ||||||||||| || | ||||||||||||||||| ||| || ||||| |||||| |||||||||||||||||| ||||| || |    
T  24529342 attatacattcatatctcaagtaatgcttataacattatatcacatcatattcaacatcaacacatcttaaacagcttcacagattatagttaacatcat 24529441  T
Q  197 cattaagtcttaatgctgcccaaaggttcaactctc 232  Q
    |||||||| | ||| || ||| ||||||||||||||    
T  24529442 cattaagtttcaatactaccccaaggttcaactctc 24529477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 113 - 232
Target Start/End: Complemental strand, 22107357 - 22107237
Alignment:
Q  113 ttcaagtaatgcataatc-attatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaatg 211  Q
    |||||||||||||||||  |||||||||||||||||||| |||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||     
T  22107357 ttcaagtaatgcataatatattatatcacatcataatcaacaacaacacaccttaaacagcttcacagattataattaacctcttcattaagtcttaata 22107258  T
Q  212 ctgcccaaaggttcaactctc 232  Q
    || | |||||||||| |||||    
T  22107257 ctactcaaaggttcatctctc 22107237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 1096490 - 1096721
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa---caacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||||| |||||||| ||| ||||| |||   |||||| ||||||||||||||| | ||| ||| |||||||| |    
T  1096490 gaccgactcatgcagcttagttaaataacaa-cagcaacacaggtagtatgcaaaaacaacataacataataatatcaaatgcaaatcaacaacatctca 1096588  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctctt 196  Q
      ||||||   ||  ||||||||||||||| | ||||||||||||||||||||| || ||||  |||||| ||||||||| || ||||||||||| || |    
T  1096589 catatacattcataattcaagtaatgcatataacattatatcacatcataatcaacatcaacgcatcttaaacagcttcataggttataattaacatcct 1096688  T
Q  197 cattaagtcttaatgctgcccaaaggttcaact 229  Q
    |||||||||| ||| || ||| ||||| |||||    
T  1096689 cattaagtctcaatactaccccaaggtccaact 1096721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 21808487 - 21808343
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa---caacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||   || ||||||||||||||||||||| ||||||| ||||||||||    
T  21808487 gaccgactcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaatcagcatgacataataatatcaattgcaattcaacaacatctta 21808389  T
Q  98 tgtatacaaatattcttcaagtaatgcat-aatcattatatcacat 142  Q
      ||| |||||| |  ||||||||||||| || |||||||||||||    
T  21808388 aatattcaaataattctcaagtaatgcataaaacattatatcacat 21808343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 21729162 - 21729033
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa---caacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||   || ||||||||||||||||||||| ||||||| ||||||||||    
T  21729162 gaccgactcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaatcagcatgacataataatatcaattgcaattcaacaacatctta 21729064  T
Q  98 tgtatacaaatattcttcaagtaatgcataa 128  Q
      ||| |||||| |  |||||||||||||||    
T  21729063 aatattcaaataattctcaagtaatgcataa 21729033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 37723930 - 37724020
Alignment:
Q  5 gactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaacatgacataataatatcaatttcaattcatcaacatct 95  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||||||| |||||||| || ||||||| || |||||||||||||||    
T  37723930 gactcatgcagcttagttaaataacagacagcaacataggcagtatacaacagcatgacatgattatatcaaattaaattcatcaacatct 37724020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 31 - 150
Target Start/End: Original strand, 18356367 - 18356488
Alignment:
Q  31 aacagcaacataggcagtatacaa-caacatgacataataatatcaatttcaattcatcaacatcttatgtatacaaatattcttcaagtaatgcat-aa 128  Q
    ||||||||||||||||| |||||| || ||||| ||||||||||||||||||||||| |||||||||   ||| ||||||||  | ||||||||||| ||    
T  18356367 aacagcaacataggcagcatacaaacagcatgatataataatatcaatttcaattcaacaacatcttgaatattcaaatatttcttaagtaatgcataaa 18356466  T
Q  129 tcattatatcacatcataatca 150  Q
     ||||||||||||| |||||||    
T  18356467 acattatatcacattataatca 18356488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 78 - 182
Target Start/End: Complemental strand, 18770022 - 18769919
Alignment:
Q  78 ttcaattcatcaacatcttatgtatacaaatattcttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcac 177  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||| |||||||  |||||||| ||| ||  ||||| || ||| |||||||||    
T  18770022 ttcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcatattcaacacaaacatctcatat-cagcttcac 18769924  T
Q  178 agatt 182  Q
    |||||    
T  18769923 agatt 18769919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 21997632 - 21997555
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaa 76  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||   ||||||||||||||||||||||||    
T  21997632 gaccgactcatgcagcttagttaaataac-aacagcaacataggcagtatacaaaaacaacatgacataataatatcaa 21997555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 78 - 182
Target Start/End: Original strand, 22032417 - 22032520
Alignment:
Q  78 ttcaattcatcaacatcttatgtatacaaatattcttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcac 177  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||| |||||||  |||||||| ||| ||  ||||| || ||| |||||||||    
T  22032417 ttcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcatattcaacacaaacatctcgtat-cagcttcac 22032515  T
Q  178 agatt 182  Q
    |||||    
T  22032516 agatt 22032520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 78 - 150
Target Start/End: Original strand, 23572180 - 23572252
Alignment:
Q  78 ttcaattcatcaacatcttatgtatacaaatattcttcaagtaatgcataatcattatatcacatcataatca 150  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||| |||||||  ||||||||||||    
T  23572180 ttcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcataatca 23572252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 26012133 - 26012056
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatatcaa 76  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| |||  |||||||| |||| ||||||||    
T  26012133 gaccgactcatgcagcttagttaataaacaaacagcaacataggcagtatgcaaagcaacatgatataacaatatcaa 26012056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 20027039 - 20026942
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaaca----acatgacataataatatcaatttcaattcatcaacatc 94  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |     ||||| ||||||||||||| | ||||||| |||||||    
T  20027039 gaccgactcatgcagcttagttaaataacaaacagcaacataggcagtatccaaaacagttcatgatataataatatcaaatgcaattcaacaacatc 20026942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 21329595 - 21329500
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatc 94  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| |||  || ||| | |||| |||||| | ||||| |||||||||||    
T  21329595 gaccgactcatgcagcttagttaaataacaaacagcaacataggcagtatgcaaatcatcataatataacaatatcgaattcaagtcatcaacatc 21329500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 150
Target Start/End: Complemental strand, 20910866 - 20910745
Alignment:
Q  31 aacagcaacataggcagtatacaa-caacatgacataataatatcaatttcaattcatcaacatcttatgtatacaaat-attcttcaagtaatgcat-a 127  Q
    ||||||||||||| ||| |||||| || ||||||||||||||||||||||||||||| |||||||||    || ||||| |||||| ||||||||||| |    
T  20910866 aacagcaacatagacagcatacaaacagcatgacataataatatcaatttcaattcaacaacatcttgaacattcaaataattctt-aagtaatgcataa 20910768  T
Q  128 atcattatatcacatcataatca 150  Q
    | ||||||||||||| |||||||    
T  20910767 aacattatatcacattataatca 20910745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 19660933 - 19660884
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat 50  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  19660933 gaccgactcatgcagcttagttaaataacaaacagcaacataggcagtat 19660884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 21502254 - 21502205
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat 50  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  21502254 gaccgactcatgcagcttagttaataaacaaacagcaacataggcagtat 21502205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 22144072 - 22144168
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat--acaacaacatgacataataatatcaatttcaattcatcaacatct 95  Q
    |||||||||||||||||||||||| ||||| ||| ||||||||| |||||  | |||||||||| |||| |||||||||| ||| ||| ||||||||    
T  22144072 gaccgactcatgcagcttagttaaataacagacatcaacataggtagtatgcaaaacaacatgatataacaatatcaattgcaaatcaacaacatct 22144168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 22959630 - 22959581
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat 50  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  22959630 gaccgactcatgcagcttagttaaataacaaacagcaacataggcagtat 22959581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 36314600 - 36314675
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatatc 74  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||| |||  || ||||| |||||||||||    
T  36314600 gaccgactcatgcagcttagttaaataacaaacagcaacataggtagtatgcaaaccatcatgatataataatatc 36314675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 21565565 - 21565659
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacat 93  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||| |||  || ||||| |||| |||||| | | ||| ||||||||||    
T  21565565 gaccgactcatgcagcttagttaaataacaaatagcaacataggcagtatccaaatcatcatgatataacaatatcgaatgcaagtcatcaacat 21565659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 114 - 232
Target Start/End: Complemental strand, 21986130 - 21986011
Alignment:
Q  114 tcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaatgc 212  Q
    |||||||||||||| | |||| |||||| ||||| ||| || ||||| |||||| ||| ||||||| |||||| ||||| || |||| |||||| ||| |    
T  21986130 tcaagtaatgcatataacattttatcacctcatattcaacatcaacacatcttaaacaacttcacaaattatagttaacatcatcatcaagtctgaatac 21986031  T
Q  213 tgcccaaaggttcaactctc 232  Q
    | ||| ||||||||||||||    
T  21986030 taccccaaggttcaactctc 21986011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 22412207 - 22412388
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatcttat 98  Q
    |||||||||||| ||||||||||| |||| |  | |||||||||||||||||||  || ||||||||||||||||||| | ||| ||| |||||||| |     
T  22412207 gaccgactcatgtagcttagttaaataacgataa-caacataggcagtatacaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaa 22412305  T
Q  99 gtatacaaatattcttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaa 190  Q
     ||||||   ||  ||||||||    ||||      ||| |||||||||||| || ||||| |||||| |||||||||||||||||||||||    
T  22412306 atatacattcataattcaagta----ataa-----gtatgacatcataatcaacatcaacacatcttaaacagcttcacagattataattaa 22412388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 29329954 - 29330081
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| |  ||||||||   |||||||||||||||||||||||| | ||| ||| |||| ||| |    
T  29329954 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacaacatgacataataatatcaaatgcaagtcaacaacgtctca 29330051  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  29330052 attattcacatataattcaagtaatgcata 29330081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 190
Target Start/End: Original strand, 18418633 - 18418793
Alignment:
Q  31 aacagcaacataggcagtatacaa-caacatgacataataatatcaatttcaattcatcaacatcttatgtatacaaatattcttcaagtaatgcata-a 128  Q
    |||| ||||||||||||||||||| || |||||||||||||||||| || ||||||| ||||||||||  ||| |||  |  |||||||||||| | | |    
T  18418633 aacatcaacataggcagtatacaaacagcatgacataataatatcatttgcaattca-caacatctta-atattcaataaaacttcaagtaatgtacaca 18418730  T
Q  129 tcattatatcacatcataatcatcaacaacatatctt-atacagcttcacagattataattaa 190  Q
     |||||||||||||||||||||    ||| | ||||| | |||||||||||| ||||||||||    
T  18418731 acattatatcacatcataatcaatgtcaaaacatcttaaaacagcttcacaggttataattaa 18418793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 22178319 - 22178269
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtata 51  Q
    |||||||||||||| |||||||||| |||||||| ||||||||||||||||    
T  22178319 gaccgactcatgcaacttagttaataaacaaacaacaacataggcagtata 22178269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 11581341 - 11581265
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaa 76  Q
    |||||||||||||||||||||||| |||| |||||||||| |  ||||||||   ||||||||||||||||||||||||    
T  11581341 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacaacatgacataataatatcaa 11581265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 20902151 - 20902075
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaa 76  Q
    |||||||||||||||||||||||| |||| |||||||||| | |||||||||   |||| |||||||||||||||||||    
T  20902151 gaccgactcatgcagcttagttaaataac-aacagcaacaca-gcagtatacaaaaacagcatgacataataatatcaa 20902075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 264910 - 264783
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  264910 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctca 264813  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  264812 attattcacatataattcaagtaatgcata 264783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 10733082 - 10732955
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  10733082 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctca 10732985  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  10732984 attattcacatataattcaagtaatgcata 10732955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 20909032 - 20909159
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| ||||||| ||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  20909032 gaccgactcatgcagcttagttaaataacaaa-agcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctca 20909129  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  20909130 attattcacatataattcaagtaatgcata 20909159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 26732930 - 26732884
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagt 48  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  26732930 gaccgactcatgcagcttagttaataaac-aacagcaacataggcagt 26732884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 39363404 - 39363531
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  39363404 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctca 39363501  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  39363502 attattcacatataattcaagtaatgcata 39363531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 39245156 - 39245232
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaa 76  Q
    |||||||||||||||||||||||| |||| |||||||||| |  ||||||||   |||| |||||||||||||||||||    
T  39245156 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaa 39245232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 40725876 - 40725951
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatatc 74  Q
    ||||||||||||||||||||||| ||||  | ||||||| |||||||||| |||  || ||||| |||||||||||    
T  40725876 gaccgactcatgcagcttagttagttaatgatcagcaacgtaggcagtatgcaaagcatcatgatataataatatc 40725951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 18319175 - 18319100
Alignment:
Q  2 accgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaa 76  Q
    ||||||||||||||||||||||| |||| |||||| ||| | |||||||||   |||| |||||||||||||||||||    
T  18319175 accgactcatgcagcttagttaaataac-aacagcgacaca-gcagtatacaaaaacagcatgacataataatatcaa 18319100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 26740743 - 26740697
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagt 48  Q
    ||||||||||||||||||||||||| ||| ||||||||||||| ||||    
T  26740743 gaccgactcatgcagcttagttaataaac-aacagcaacatagacagt 26740697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 42245507 - 42245380
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||| ||||||||| |||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  42245507 gaccgactcatgcaacttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctca 42245410  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  42245409 attattcacatataattcaagtaatgcata 42245380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 2154756 - 2154680
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaa 76  Q
    |||||||||||||||||||||||| |||| || ||||||| |  ||||||||   |||| |||||||||||||||||||    
T  2154756 gaccgactcatgcagcttagttaaataac-aatagcaacaca-acagtatacaaaaacagcatgacataataatatcaa 2154680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 141; Significance: 5e-74; HSPs: 2)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 4735 - 4972
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||||| || ||||||||||||||||||| ||||   ||||||||  | ||||||| ||||||||||| ||||||    
T  4735 gaccgactcatgcagcttagttaaataacaa-caacaacataggcagtatacaaaaacagcatgacataaatacatcaattgcaattcatcaaaatctta 4833  T
Q  98 tgtatacaaatattcttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttc 197  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| |||||||| |     
T  4834 tgtatacaaatattcttcaagtaaggcataaacattatatcacatcataatcaacaacaacatatcttatacaacttcacagattatacttaacctcatt 4933  T
Q  198 attaagtcttaatgctgcccaaaggttcaactctcgaca 236  Q
     |||||||||||| || ||||||||||||||| ||||||    
T  4934 gttaagtcttaatcctacccaaaggttcaactgtcgaca 4972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 53 - 236
Target Start/End: Original strand, 13 - 196
Alignment:
Q  53 aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatacaaatattcttcaagtaatgcataatcattatatcacatcataatcatc 152  Q
    |||| ||||||||||  | ||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| |    
T  13 aacagcatgacataaatacatcaattgcaattcatcaaaatcttatgtatacaaatattcttcaagtaaggcataaacattatatcacatcataatcaac 112  T
Q  153 aacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaatgctgcccaaaggttcaactctcgaca 236  Q
    |||||||||||||||||| |||||||||||||| |||||||| |  |||||||||||| || ||||||||||||||| ||||||    
T  113 aacaacatatcttatacaacttcacagattatacttaacctcattgttaagtcttaatcctacccaaaggttcaactgtcgaca 196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0718 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: scaffold0718
Description:

Target: scaffold0718; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 5226 - 4991
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaacatgacataataatatcaatttcaattcatcaacatcttatgt 100  Q
    |||||||||||||||||||||||| ||||||||| ||||||||| | ||||||||| ||||||||||| ||||||| |||||||||||||||||||||||    
T  5226 gaccgactcatgcagcttagttaaataacaaacatcaacataggtattatacaacatcatgacataattatatcaaattcaattcatcaacatcttatgt 5127  T
Q  101 atacaaatattcttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcatt 200  Q
    ||||||| ||||||||||||||| |||| ||||||| |||||| |||||| ||||||||||| |||| ||| |||||| ||||||||||||||  | |||    
T  5126 atacaaacattcttcaagtaatgtataaacattataacacatcttaatcaacaacaacatattttattcagtttcacatattataattaaccttattatt 5027  T
Q  201 aagtcttaatgctgcccaaaggttcaactctcgaca 236  Q
    || ||||||| || ||||| ||||||||||||||||    
T  5026 aaatcttaatcctacccaagggttcaactctcgaca 4991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 134; Significance: 7e-70; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 5 - 236
Target Start/End: Original strand, 13238 - 13472
Alignment:
Q  5 gactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatcttatgta 101  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||| ||||   ||||||||||||||||||| ||||||||||||||||||  ||    
T  13238 gactcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaata 13336  T
Q  102 tacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcatt 200  Q
    | |||||||||||||||||||||||| | ||||||||||||||||||||| || ||||| |||||| ||||||||||| |||||||||||| || |||||    
T  13337 ttcaaatattcttcaagtaatgcatataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacaaattataattaacatcatcatt 13436  T
Q  201 aagtcttaatgctgcccaaaggttcaactctcgaca 236  Q
    |||||||||||||  || ||||||||||| ||||||    
T  13437 aagtcttaatgctatcccaaggttcaactgtcgaca 13472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 134; Significance: 7e-70; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 1874 - 2112
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa---caacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||||| ||||||||||| ||||||||||   |||||||||||||||||||||||| ||||||||||||||||||    
T  1874 gaccgactcatgcagcttagttaaataacaa-cagcaacatagacagtatacaaaaacaacatgacataataatatcaattgcaattcatcaacatctta 1972  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctctt 196  Q
      ||| |||||||||||||||||||||| | | ||||||||||||||||||||| || ||||| |||||| | |||||||||||||||||||||| || |    
T  1973 aatattcaaatattcttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaatagcttcacagattataattaacatcct 2072  T
Q  197 cattaagtcttaatgctgcccaaaggttcaactctcgaca 236  Q
    |||||||||||||| ||  || ||||||||||||||||||    
T  2073 cattaagtcttaatactatcccaaggttcaactctcgaca 2112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 133; Significance: 3e-69; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 20933 - 21167
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa---caacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||  |||||||||||||||||| |||||||||||||| ||| |||   |||||||||||||||||||||||| ||||||| ||||||||||    
T  20933 gaccgactcataaagcttagttaattaacaatcagcaacataggcaatatgcaaaaacaacatgacataataatatcaattgcaattcaacaacatctta 21032  T
Q  98 tgtatacaaatattcttcaagtaatgcataat-cattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctctt 196  Q
    | ||| ||||| |||| ||||||||||||||  ||||||||||||||||||||| || ||||| |||||| |||||||||||| ||||||||||| ||||    
T  21033 tatattcaaatgttctacaagtaatgcataaaacattatatcacatcataatcagcatcaacacatcttaaacagcttcacaggttataattaacatctt 21132  T
Q  197 cattaagtcttaatgctgcccaaaggttcaactct 231  Q
    |||||||||||||| || |||||||||||||||||    
T  21133 cattaagtcttaatactacccaaaggttcaactct 21167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 126; Significance: 4e-65; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 1975 - 2213
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa---caacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||||||||||   |||||||||||||| ||||||||| ||||||| ||||||||||    
T  1975 gaccgactcatgcagcttagttaattaacaa-cagcgacataggcagtatacaaaatcaacatgacataatgatatcaattgcaattcaacaacatctta 2073  T
Q  98 tgtatacaaatattcttcaagtaatgcataat-cattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctctt 196  Q
      ||| |||| ||| ||||||||||||||||  ||||||||| ||||||||||| |||||||||||| |||||||||| ||| ||||| | ||||||  |    
T  2074 aatattcaaacattattcaagtaatgcataaaacattatatctcatcataatcaacaacaacatatcatatacagctttacatattattaataaccttat 2173  T
Q  197 cattaagtcttaatgctgcccaaaggttcaactctcgaca 236  Q
    |||||||||||||| || ||||||||||||||||||||||    
T  2174 cattaagtcttaatcctacccaaaggttcaactctcgaca 2213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 118; Significance: 2e-60; HSPs: 2)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 3493 - 3727
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||| ||||||||||| |||| || ||||||||||||||||||||| ||||   ||||||||||||||||||| ||||||||||||||||||    
T  3493 gaccgactcatgtagcttagttaaataactaa-agcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatctta 3591  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctctt 196  Q
      ||| |||||||||||||||||||||| | | ||||||||||||||||||||| || ||||| |||||| ||||||||| |||||||||||||| || |    
T  3592 aatattcaaatattcttcaagtaatgcaaataacattatatcacatcataatcaacatcaacacatcttaaacagcttcatagattataattaacatcct 3691  T
Q  197 cattaagtcttaatgctgcccaaaggttcaactctc 232  Q
    |||||||||||||| || ||| || |||||| ||||    
T  3692 cattaagtcttaatactaccccaaagttcaattctc 3727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 366 - 599
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaa--catgacataataatatcaatttcaattcatcaacatcttat 98  Q
    |||||||||||||||||||||||| |||||| ||  |||||||||||||||||| |   |||||| ||||||||||||||  || ||| ||||||||||     
T  366 gaccgactcatgcagcttagttaaataacaa-caataacataggcagtatacaaaatagcatgacgtaataatatcaattggaagtcaacaacatcttaa 464  T
Q  99 gtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttc 197  Q
     ||| | | ||| |||||||||||||| | | ||||||||||||||||||||| || ||||| |||||| ||||||||| | |||||||||||| || ||    
T  465 atattcgattatacttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcatatattataattaacatcctc 564  T
Q  198 attaagtcttaatgctgcccaaaggttcaactctc 232  Q
    ||||||||| ||| || ||| ||||||||||||||    
T  565 attaagtctcaatactaccccaaggttcaactctc 599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 24401 - 24161
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa----caacatgacataataatatcaatttcaattcatcaacatctt 96  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||    || |||||||||| |||||||||| |||||||||||||||||    
T  24401 gaccgactcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaacacagcatgacataaaaatatcaattgcaattcatcaacatctt 24303  T
Q  97 atgtatacaaatattcttcaagtaatgcata-atcattatatcacatcataa-tcatcaacaacatatcttatacagcttcacagattataattaacctc 194  Q
    |  ||| |||||||||||||||||||||| | | |||||||||||||||||| ||| || ||||| |||||| |||||||||||||||||||||||| ||    
T  24302 aaatattcaaatattcttcaagtaatgcacataacattatatcacatcataattcaacatcaacacatcttaaacagcttcacagattataattaacatc 24203  T
Q  195 ttcattaagtcttaatgctgcccaaaggttcaactctcgaca 236  Q
     ||| ||||||||||| ||  || || |||||||||||||||    
T  24202 ctcaataagtcttaatactatcccaaagttcaactctcgaca 24161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 6222 - 5983
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaa--acagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatct 95  Q
    |||||||||||||||||||||||| ||||||  ||| ||||||||| ||||||||| ||||   |||||| |||||||||||| ||||||||||||||||    
T  6222 gaccgactcatgcagcttagttaaataacaacaacaacaacataggtagtatacaaaaacagcatgacatgataatatcaattgcaattcatcaacatct 6123  T
Q  96 tatgtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctc 194  Q
    ||  ||| |||||||||||||||||||||| | | ||||||||||||||||||||| || ||||| |||||| |||||||||||  ||||||||||| ||    
T  6122 taaatattcaaatattcttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacattttataattaacatc 6023  T
Q  195 ttcattaagtcttaatgctgcccaaaggttcaactctcga 234  Q
     ||||||||||||||||||  || ||||||| ||||||||    
T  6022 atcattaagtcttaatgctatcccaaggttccactctcga 5983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 114; Significance: 6e-58; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 4872 - 5098
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa---caacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    ||||||||||||||| |||||||| |||||| ||||||||||||||||||||||   || ||||||||||||||||||| | ||||||| ||||||||||    
T  4872 gaccgactcatgcagattagttaaataacaa-cagcaacataggcagtatacaaaatcagcatgacataataatatcaaatgcaattcaacaacatctta 4970  T
Q  98 tgtatacaaatattcttcaagtaatgcataat-cattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctctt 196  Q
     |||| |||||| |  |||||||||||||||  ||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||  ||||| |||    
T  4971 agtattcaaataattctcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacagattatagctaacccctt 5070  T
Q  197 cattaagtcttaatgctgcccaaaggtt 224  Q
    |||||||||||| ||||  |||||||||    
T  5071 cattaagtcttattgctagccaaaggtt 5098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 104; Significance: 6e-52; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 3248 - 3015
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatcttat 98  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||  |||||||||||||||||||||| | ||| ||| |||||||| |     
T  3248 gaccgactcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaacaacatgacataataatatcaaatgcaagtcaacaacatctcaa 3150  T
Q  99 gtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttc 197  Q
     ||||||   ||  ||||||||||||||| | ||||||||||||||||||||| || ||||  |||||| |||||||||||| ||||||||||| || ||    
T  3149 atatacattcataattcaagtaatgcatataacattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggttataattaacatcatc 3050  T
Q  198 attaagtcttaatgctgcccaaaggttcaactctc 232  Q
    ||||||||| ||| || ||| ||||||||||||||    
T  3049 attaagtctcaatactaccccaaggttcaactctc 3015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 104; Significance: 6e-52; HSPs: 3)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 38784 - 39017
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatcttat 98  Q
    |||||| |||||||||||| |||| ||||||  |||||||||||||||||||||  || ||||||||||||||||||| | ||| | | ||||||||||     
T  38784 gaccgagtcatgcagcttaattaaataacaat-agcaacataggcagtatacaaaacagcatgacataataatatcaaatgcaaataaacaacatcttaa 38882  T
Q  99 gtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttc 197  Q
     ||| ||| ||| |||||||||||||| | | ||||||||||||||||||||| || ||||| |||||| |||||||||||||||||||||||| || ||    
T  38883 atattcaattatacttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacatcatc 38982  T
Q  198 attaagtcttaatgctgcccaaaggttcaactctc 232  Q
    ||||||||||||| || ||| ||||||||||||||    
T  38983 attaagtcttaatactaccccaaggttcaactctc 39017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 32965 - 33153
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatcttat 98  Q
    ||||||||||||||||||| |||| ||||||  |||||||||||||||||||||  || ||||||||||||||||||| | ||| | | ||||||||||     
T  32965 gaccgactcatgcagcttaattaaataacaat-agcaacataggcagtatacaaaacagcatgacataataatatcaaatgcaagttaacaacatcttaa 33063  T
Q  99 gtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataat 187  Q
     ||| ||| ||| |||||||||||||| | | ||||||||||||||||||||| || ||||| |||||| ||||||||||||||||||||    
T  33064 atattcaattatacttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataat 33153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 9769 - 9845
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaac---atgacataataatatcaa 76  Q
    |||||||||||||||||||||||| |||| |||||||||| |  |||||||||| |||   ||||||||||||||||||    
T  9769 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagaatgacataataatatcaa 9845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 101; Significance: 3e-50; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 38 - 236
Target Start/End: Original strand, 6669 - 6871
Alignment:
Q  38 acataggcagtatacaa---caacatgacataataatatcaatttcaattcatcaacatcttatgtatacaaatattcttcaagtaatgcataat-catt 133  Q
    |||||||||||||||||   |||||||||||||| ||||||||  ||||||| ||||||||||  ||| |||| ||| ||||||||||||||||  | ||    
T  6669 acataggcagtatacaaaatcaacatgacataatgatatcaatagcaattcaacaacatcttaaatattcaaacattattcaagtaatgcataaaacgtt 6768  T
Q  134 atatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaatgctgcccaaaggttcaactctcg 233  Q
    ||||||||||||||||| |||||||||||| |||||||||| ||||||||||| ||||||  ||||||| ||||||| || |||||||||||||||||||    
T  6769 atatcacatcataatcaacaacaacatatcatatacagctttacagattataaataaccttatcattaaatcttaatcctacccaaaggttcaactctcg 6868  T
Q  234 aca 236  Q
    |||    
T  6869 aca 6871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 100; Significance: 1e-49; HSPs: 5)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 66 - 236
Target Start/End: Original strand, 124675 - 124846
Alignment:
Q  66 aataatatcaatttcaattcatcaacatcttatgtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatct 164  Q
    ||||||||||||| |||||||||||| | |||  ||| |||||||||||||||||||||||| | ||||||||||||||||||||| || ||||| ||||    
T  124675 aataatatcaattgcaattcatcaacgttttaaatattcaaatattcttcaagtaatgcatataacattatatcacatcataatcaacatcaacacatct 124774  T
Q  165 tatacagcttcacagattataattaacctcttcattaagtcttaatgctgcccaaaggttcaactctcgaca 236  Q
    || |||||||||||||||||||||||| || ||||||||||||||||||  || ||||||||||||||||||    
T  124775 taaacagcttcacagattataattaacatcctcattaagtcttaatgctatcccaaggttcaactctcgaca 124846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 174789 - 174883
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaacatgacataataatatcaatttcaattcatcaacatct 95  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| || ||||||| ||||||||| ||||||||    
T  174789 gaccgactcatgcagcttagttaaataacaaacagcaacataggcagtatacaacagcatgacatgattatatcaaattcaattcaacaacatct 174883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 136467 - 136414
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa 54  Q
    |||||||||||||| |||||||||| |||||||||| |||||||||||| ||||    
T  136467 gaccgactcatgcaacttagttaataaacaaacagcgacataggcagtacacaa 136414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 145175 - 145122
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa 54  Q
    |||||||||||||| |||||||||| |||||||||| |||||||||||| ||||    
T  145175 gaccgactcatgcaacttagttaataaacaaacagcgacataggcagtacacaa 145122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 121789 - 121835
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagt 48  Q
    |||||||||||||||||||||||| |||| |||| |||||||||||||    
T  121789 gaccgactcatgcagcttagttaaataac-aacaacaacataggcagt 121835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 96; Significance: 3e-47; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 25919 - 26152
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaa--catgacataataatatcaatttcaattcatcaacatcttat 98  Q
    |||||||||||| ||||||||||| ||||||  ||||||||||||||||||||| |   ||||||||||||||||||| | ||| | | |||||||| |     
T  25919 gaccgactcatgaagcttagttaaataacaat-agcaacataggcagtatacaaaatatcatgacataataatatcaaatgcaagtaaacaacatctcaa 26017  T
Q  99 gtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttc 197  Q
     ||| ||| ||| |||||||||||||||  | ||||||||||||||||||||| || ||||  |||||| |||||||||||||||||||||||| || ||    
T  26018 atattcaattatacttcaagtaatgcatttaacattatatcacatcataatcaacatcaacgcatcttaaacagcttcacagattataattaacatcctc 26117  T
Q  198 attaagtcttaatgctgcccaaaggttcaactctc 232  Q
    ||||||||| |||||| ||| ||||||||||||||    
T  26118 attaagtctcaatgctaccccaaggttcaactctc 26152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 39881 - 40113
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaa--catgacataataatatcaatttcaattcatcaacatcttat 98  Q
    |||| ||||||| ||||||||||| ||||||  ||||||||||||||||||||| |   ||||||||||||||||||| | ||| | | |||||||| |     
T  39881 gaccaactcatgaagcttagttaaataacaat-agcaacataggcagtatacaaaatatcatgacataataatatcaaatgcaagtaaacaacatctcaa 39979  T
Q  99 gtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttc 197  Q
     ||| ||| ||| |||||||||||||||  | ||||||||||||||||||||| || ||||  |||||| ||||||||||| |||||||||||| || ||    
T  39980 atattcaattatacttcaagtaatgcatttaacattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaaattataattaacatcctc 40079  T
Q  198 attaagtcttaatgctgcccaaaggttcaactctc 232  Q
    ||||||||| |||||| ||| ||||||||||||||    
T  40080 attaagtctcaatgctaccc-aaggttcaactctc 40113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 93; Significance: 2e-45; HSPs: 3)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 340045 - 339818
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatcttat 98  Q
    |||||||||||||||||||||||| |||||  || |||||||||||||||||||  |||||||||||||||||||||| | ||| ||| |||||||| |     
T  340045 gaccgactcatgcagcttagttaaataaca--caacaacataggcagtatacaaaacaacatgacataataatatcaaat-caagtcaacaacatctcaa 339949  T
Q  99 gtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttc 197  Q
    |||||||   ||  |||||||||||  || | ||||||||||||||||||||| || ||||| |||||| |||||||||||||||||||||||| || ||    
T  339948 gtatacattcataattcaagtaatgtgtataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacgtcatc 339849  T
Q  198 attaagtcttaatgctgcccaaaggttcaac 228  Q
    ||||||||| ||| || ||| ||||||||||    
T  339848 attaagtctcaatactaccccaaggttcaac 339818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 150
Target Start/End: Original strand, 71353 - 71474
Alignment:
Q  31 aacagcaacataggcagtatacaa-caacatgacataataatatcaatttcaattcatcaacatcttatgtatacaaat-attcttcaagtaatgcat-a 127  Q
    ||||||||||||||||| |||||| || |||||||||||| |||||||||||||||| |||||||||  |||| ||||| |||||| | ||||||||| |    
T  71353 aacagcaacataggcagcatacaaacagcatgacataatattatcaatttcaattcaacaacatcttgagtattcaaataattctt-aggtaatgcataa 71451  T
Q  128 atcattatatcacatcataatca 150  Q
    | ||||||||||||| |||||||    
T  71452 aacattatatcacattataatca 71474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 158592 - 158465
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  158592 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctca 158495  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  158494 attattcacatataattcaagtaatgcata 158465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 22906 - 23139
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||||| |||||||| |  |||||||||| ||||   ||||||||||||||||| | ||| ||| ||||||||||    
T  22906 gaccgactcatgcagcttagttaaataacaa-cagcaacacac-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacatctta 23003  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctctt 196  Q
      ||| ||| ||| |||||||||||||| | | |||||||||||||| |||||| || ||||| |||||| ||||||||||||||||||| |||| || |    
T  23004 aatattcaattatacttcaagtaatgcacataacattatatcacatcgtaatcaacatcaacacatcttaaacagcttcacagattataaataacatcat 23103  T
Q  197 cattaagtcttaatgctgcccaaaggttcaactctc 232  Q
    |||||||||| ||| || ||| ||||||||||||||    
T  23104 cattaagtctcaatactaccccaaggttcaactctc 23139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 89; Significance: 5e-43; HSPs: 3)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 26163 - 25930
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||   ||||||||||||||||| |  |||||| |||| ||| |    
T  26163 gaccgactcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacataataatatcaaatgtaattcaacaacgtctca 26065  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctctt 196  Q
     |||||||   ||  |||||||||||| |  | ||||||||||||||||||||| || ||||| |||||| ||||||||| |||||||||||||| || |    
T  26064 agtatacattcataattcaagtaatgcgtttaacattatatcacatcataatcaacatcaacacatcttaaacagcttcatagattataattaacatcat 25965  T
Q  197 cattaagtcttaatgctgcccaaaggttcaactct 231  Q
    |||||||||| ||| || ||| |||||||| ||||    
T  25964 cattaagtctcaatactaccccaaggttcagctct 25930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 130 - 231
Target Start/End: Complemental strand, 33461 - 33360
Alignment:
Q  130 cattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaatgctgcccaaaggttcaact 229  Q
    ||||||||||||||||||||| || ||||  |||||| ||||||||| || ||||||||||| || ||||||||||| ||| || ||| |||||||||||    
T  33461 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcataggttataattaacatcatcattaagtctcaatactaccccaaggttcaact 33362  T
Q  230 ct 231  Q
    ||    
T  33361 ct 33360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 44801 - 44709
Alignment:
Q  5 gactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatct 95  Q
    |||||||||||||||||||| |||||| |||||||| ||||||||||||| ||||   ||||||||||||||||| | ||| ||| ||||||||    
T  44801 gactcatgcagcttagttaaataacaa-cagcaacacaggcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacatct 44709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 39500 - 39729
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatcttat 98  Q
    |||||||||||||||||||||||| |||||| || |||||||||||||||||||  || ||||||||||||||||||| | ||| ||| |||||||| |     
T  39500 gaccgactcatgcagcttagttaaataacaa-caacaacataggcagtatacaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaa 39598  T
Q  99 gtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttc 197  Q
     ||||||   ||  ||||||||||||| | | ||||||||||||||||||||| || ||||| |||||| ||||||||| |||||||||||||| || |     
T  39599 atatacattcataattcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcatagattataattaacatcatt 39698  T
Q  198 attaagtcttaatgctgcccaaaggttcaac 228  Q
    ||||||||| ||| || ||| ||||||||||    
T  39699 attaagtctcaatactaccccaaggttcaac 39729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 8627 - 8424
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat--acaacaacatgacataataatatcaatttcaattcatcaacatcttat 98  Q
    |||||||||||||||||||||||| |||||    ||||||||||||||||  | |||| ||||||||||||||||||||| ||| ||| || |||||||     
T  8627 gaccgactcatgcagcttagttaaataaca----gcaacataggcagtatcaaaaacagcatgacataataatatcaattgcaagtcaacatcatcttaa 8532  T
Q  99 gtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttc 197  Q
     ||| ||| ||| |||||||||||||| | | |||||||||||| |||||||| || ||||| |||||| |||||||||||||||||||||||| || ||    
T  8531 atattcaattatacttcaagtaatgcacataacattatatcacaacataatcaacatcaacacatcttaaacagcttcacagattataattaacatcctc 8432  T
Q  198 attaagtc 205  Q
    ||||||||    
T  8431 attaagtc 8424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 75312 - 75083
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatcttat 98  Q
    |||||||||||||||||||||||| |||||| || |||||||||||||||||||  || ||||||||||||||||||| | ||| ||| |||||||| |     
T  75312 gaccgactcatgcagcttagttaaataacaa-caacaacataggcagtatacaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaa 75214  T
Q  99 gtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttc 197  Q
     ||||||   ||  ||||||||||||| | | ||||||||||||||||||||| || ||||| |||||| ||||||||| |||||||||||||| || |     
T  75213 atatacattcataattcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcatagattataattaacatcatt 75114  T
Q  198 attaagtcttaatgctgcccaaaggttcaac 228  Q
    ||||||||| ||| || ||| ||||||||||    
T  75113 attaagtctcaatactaccccaaggttcaac 75083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 87; Significance: 8e-42; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 28 - 232
Target Start/End: Original strand, 13141 - 13349
Alignment:
Q  28 acaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatcttatgtatacaaatattcttcaagtaatgc 124  Q
    ||||||||||||||||||||||||||| ||||   ||||||||||||||||||| ||| ||| || |||||||  ||| ||| ||| |||||||||||||    
T  13141 acaaacagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattcaattatacttcaagtaatgc 13240  T
Q  125 ata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaatgctgcccaaaggt 223  Q
    | | | |||||||||||| |||||||| || ||||| |||||| |||| ||||||||||||||||||| |||||||||||||  ||| || ||| || ||    
T  13241 acataacattatatcacaacataatcaacatcaacacatcttaaacagtttcacagattataattaacatcttcattaagtcccaatactaccccaaagt 13340  T
Q  224 tcaactctc 232  Q
    |||||||||    
T  13341 tcaactctc 13349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 34146 - 34221
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatatc 74  Q
    ||||||||||| |||||||||||| ||||||||| |||||||||||||||||||  || ||||| |||||||||||    
T  34146 gaccgactcatacagcttagttaaataacaaacaacaacataggcagtatacaacccatcatgatataataatatc 34221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 84; Significance: 5e-40; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 39936 - 40169
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatcttat 98  Q
    |||| |||||||||||||| |||| ||||||  |||||||||||||||||||||  |||||||||||||||||||||| | ||  |||  |||||||||     
T  39936 gaccaactcatgcagcttaattaaataacaat-agcaacataggcagtatacaaaacaacatgacataataatatcaaatgcatgtcaataacatcttaa 40034  T
Q  99 gtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttc 197  Q
     |||   | ||| |||||||||||||| | | ||||||||||||||||||||| || ||||| ||| || | |||||||||||||||||||||| || ||    
T  40035 atatttgattatacttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcataaagagcttcacagattataattaacatcatc 40134  T
Q  198 attaagtcttaatgctgcccaaaggttcaactctc 232  Q
    ||||||||| ||| || ||| ||||||||||||||    
T  40135 attaagtctcaatactaccccaaggttcaactctc 40169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 19983 - 19933
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtata 51  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  19983 gaccgactcatgcagcttaattaataaacaaacagcaacataggcagtata 19933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 82; Significance: 7e-39; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 17315 - 17079
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaa-----catgacataataatatcaatttcaattcatcaacatct 95  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||| ||     ||||||||||||||||||| | ||| ||| ||||||||    
T  17315 gaccgactcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaaaacagcatgacataataatatcaaatgcaagtcaacaacatct 17217  T
Q  96 tatgtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctc 194  Q
     | |||||||   ||  |||||||||||| |  | ||||||||||||||||||||| || |||||  ||||| ||||||| |||||||||||||||| ||    
T  17216 caagtatacattcataattcaagtaatgcgtttaacattatatcacatcataatcaacatcaacacgtcttaaacagctttacagattataattaacatc 17117  T
Q  195 ttcattaagtcttaatgctgcccaaaggttcaactctc 232  Q
     | ||||||||| ||| || ||| |||||| |||||||    
T  17116 atgattaagtctcaatactaccccaaggtttaactctc 17079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 81; Significance: 3e-38; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 4531 - 4763
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatctta 97  Q
    ||||||||||||| |||||||||| |||||| |||||||| | |||||||| || ||||   ||||||||||||||||| | ||| ||| |||||||| |    
T  4531 gaccgactcatgc-gcttagttaaataacaa-cagcaacacaagcagtatataaaaacagcatgacataataatatcaaatgcaagtcaacaacatctca 4628  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctctt 196  Q
      ||||||   ||  |||||||||||| || | ||||||||||||||||||||| || ||||| |||||| |||||||||||||||||||||||| || |    
T  4629 aatatacattcataattcaagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacatcat 4728  T
Q  197 cattaagtcttaatgctgcccaaaggttcaactct 231  Q
    |||||||||| ||| || ||| |||||||||||||    
T  4729 cattaagtctcaatactaccccaaggttcaactct 4763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 12113 - 12345
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatctta 97  Q
    ||||||||||||| |||||||||| |||||| |||||||| | |||||||| || ||||   ||||||||||||||||| | ||| ||| |||||||| |    
T  12113 gaccgactcatgc-gcttagttaaataacaa-cagcaacacaagcagtatataaaaacagcatgacataataatatcaaatgcaagtcaacaacatctca 12210  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctctt 196  Q
      ||||||   ||  |||||||||||| || | ||||||||||||||||||||| || ||||| |||||| |||||||||||||||||||||||| || |    
T  12211 aatatacattcataattcaagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacatcat 12310  T
Q  197 cattaagtcttaatgctgcccaaaggttcaactct 231  Q
    |||||||||| ||| || ||| |||||||||||||    
T  12311 cattaagtctcaatactaccccaaggttcaactct 12345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 22065 - 22297
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatctta 97  Q
    ||||||||||||| |||||||||| |||||| |||||||| | |||||||| || ||||   ||||||||||||||||| | ||| ||| |||||||| |    
T  22065 gaccgactcatgc-gcttagttaaataacaa-cagcaacacaagcagtatataaaaacagcatgacataataatatcaaatgcaagtcaacaacatctca 22162  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctctt 196  Q
      ||||||   ||  |||||||||||| || | ||||||||||||||||||||| || ||||| |||||| |||||||||||||||||||||||| || |    
T  22163 aatatacattcataattcaagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacatcat 22262  T
Q  197 cattaagtcttaatgctgcccaaaggttcaactct 231  Q
    |||||||||| ||| || ||| |||||||||||||    
T  22263 cattaagtctcaatactaccccaaggttcaactct 22297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 16698 - 16466
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||||| |||||||| | |||||||||   |||| ||||||||||||||||||| |  || ||| || ||||| |    
T  16698 gaccgactcatgcagcttagttaaataacaa-cagcaacacaagcagtatacgaaaacagcatgacataataatatcaaatggaagtcaacagcatctca 16600  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctctt 196  Q
     |||||||   ||  |||||||||||| || | ||||||||||||||| ||||| || ||||| |||||| ||||||||||||| |||||||||| || |    
T  16599 agtatacattcataattcaagtaatgcgtataacattatatcacatcaaaatcaacatcaacacatcttaaacagcttcacagactataattaacatcat 16500  T
Q  197 cattaagtcttaatgctgcccaaaggttcaactc 230  Q
    |||||||||| ||| || ||| ||||||||||||    
T  16499 cattaagtctcaatactaccccaaggttcaactc 16466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 114 - 232
Target Start/End: Original strand, 1052 - 1171
Alignment:
Q  114 tcaagtaatgcataat-cattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaatgc 212  Q
    |||||||||||||||  ||||||||||||||||||||| |||||||| |||||| ||| |||||||||||||||||| |||||||||||||||||||| |    
T  1052 tcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacatcttcacagattataattagcctcttcattaagtcttaatac 1151  T
Q  213 tgcccaaaggttcaactctc 232  Q
    | |||||| |||||||||||    
T  1152 tacccaaaagttcaactctc 1171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 75; Significance: 1e-34; HSPs: 3)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 134 - 232
Target Start/End: Original strand, 3640 - 3738
Alignment:
Q  134 atatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaatgctgcccaaaggttcaactctc 232  Q
    ||||||||||||||||| |||||||| |||||| |||||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||    
T  3640 atatcacatcataatcaacaacaacacatcttaaacagcttcacagattataattagcctcttcattaagtcttaatactacccaaaggttcaactctc 3738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 134 - 232
Target Start/End: Original strand, 7704 - 7802
Alignment:
Q  134 atatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaatgctgcccaaaggttcaactctc 232  Q
    ||||||||||||||||| |||||||| |||||| |||||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||    
T  7704 atatcacatcataatcaacaacaacacatcttaaacagcttcacagattataattagcctcttcattaagtcttaatactacccaaaggttcaactctc 7802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 27847 - 27770
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat--acaacaacatgacataataatatcaa 76  Q
    ||||||||||||||||||||||||| |||||||| ||||||||| |||||  | |||| ||||| |||| ||||||||    
T  27847 gaccgactcatgcagcttagttaataaacaaacaacaacataggtagtatgcaaaacagcatgatataacaatatcaa 27770  T

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Target: scaffold0639 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0639
Description:

Target: scaffold0639; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 8502 - 8732
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||| ||||| ||||||  ||||||||||| ||||||||| ||||   ||||||||||||||||||| ||| ||| ||||||||||    
T  8502 gaccgactcatgcagcttggttaaataacaat-agcaacataggtagtatacaaaaacagtatgacataataatatcaattgcaagtcaacaacatctta 8600  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctctt 196  Q
       || ||| | | |||||||||||||| | | |||||    |||||||||||| || ||||| ||| || ||||||||||||||| |||||||| || |    
T  8601 aacattcaagtgtacttcaagtaatgcacataacatta----acatcataatcaacatcaacacatcctaaacagcttcacagattgtaattaacatcat 8696  T
Q  197 cattaagtcttaatgctgcccaaaggttcaactctc 232  Q
    |||||||||||||| || | | ||||||||||||||    
T  8697 cattaagtcttaatactactccaaggttcaactctc 8732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 71; Significance: 3e-32; HSPs: 3)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 33054 - 32824
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatcttat 98  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||||||  || ||||||||||||||||||||| ||||||| ||||||||||     
T  33054 gaccgactcatgcagcttagttaattaacaa-cagcaacacaggcagtatacaaaacagcatgacataataatatcaattgcaattcaacaacatcttaa 32956  T
Q  99 gtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttc 197  Q
     ||| | | ||| |||| ||||||||||| | ||||||| |||||||| |||| || || |||   | | | ||||||||||||||||| ||||  ||||    
T  32955 atattc-attatacttcgagtaatgcatataacattataacacatcatgatcaacatcagcat-cataaaatagcttcacagattataactaacaccttc 32858  T
Q  198 attaagtcttaatgctgcccaaaggttcaactct 231  Q
    | ||||| | ||| || ||| |||||||||||||    
T  32857 aataagtttcaatactaccccaaggttcaactct 32824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 45951 - 46181
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatcttat 98  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||||||  || ||||||||||||||||||||| ||||||| ||||||||||     
T  45951 gaccgactcatgcagcttagttaattaacaa-cagcaacacaggcagtatacaaaacagcatgacataataatatcaattgcaattcaacaacatcttaa 46049  T
Q  99 gtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttc 197  Q
     ||| | | ||| |||| ||||||||||| | ||||||| |||||||| |||| || || |||   | | | ||||||||||||||||| ||||  ||||    
T  46050 atattc-attatacttcgagtaatgcatataacattataacacatcatgatcaacatcagcat-cataaaatagcttcacagattataactaacaccttc 46147  T
Q  198 attaagtcttaatgctgcccaaaggttcaactct 231  Q
    | ||||| | ||| || ||| |||||||||||||    
T  46148 aataagtttcaatactaccccaaggttcaactct 46181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 16136 - 16323
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||| |||||||||||||||||   |||| || || || |||||||||| | |||  || || ||||| |    
T  16136 gaccgactcatgcagcttagttaaataac-aacaacaacataggcagtatacaaaaacagcaagatatcataatatcaaatgcaagccaacatcatctca 16234  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataa 186  Q
     |||||||   ||   |||||||||||||| | ||||||||||| |||| |||| || |||||| | | | |||||||||||||||||||    
T  16235 agtatacattcataactcaagtaatgcatataacattatatcacgtcatgatcaacatcaacatct-taaaacagcttcacagattataa 16323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0908 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0908
Description:

Target: scaffold0908; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 3284 - 3103
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||   ||| ||||||||||||| |  |||||| |||||||| |    
T  3284 gaccgactcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgatataataatatcaaatgtaattcaacaacatctca 3186  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacag 179  Q
     |||||||   ||  |||||||||||| |  | ||||||||||||||||||||| || ||||| |||||| ||||||||||||    
T  3185 agtatacattcataattcaagtaatgcgtttaacattatatcacatcataatcaacatcaacacatcttaaacagcttcacag 3103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 4 - 182
Target Start/End: Original strand, 26850 - 27027
Alignment:
Q  4 cgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaaca-tgac-ataataatatcaatttcaattcatcaacatcttatgta 101  Q
    ||||||||||| ||| ||||| ||||||  |||| |||||||||  |||||||||| | |  ||||| ||||||||| ||||||||||||||||||||||    
T  26850 cgactcatgcatcttggttaaataacaat-agcagcataggcagattacaacaacaatcatgataattatatcaatt-caattcatcaacatcttatgta 26947  T
Q  102 tacaaatattcttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagatt 182  Q
    ||||||||||||||||||||||||||| |||||||  |||||||||||| ||  ||||| || || |||||||||||||||    
T  26948 tacaaatattcttcaagtaatgcataaacattataatacatcataatcaacacaaacatctcata-acagcttcacagatt 27027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 58 - 231
Target Start/End: Original strand, 27912 - 28086
Alignment:
Q  58 catgacataataatatcaatttcaattcatcaacatcttatgtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaaca 156  Q
    ||||||||||||||||||| | ||| ||| |||||||| |  ||||||   ||  ||||||||||||||| | ||||||||||||||||||||| || ||    
T  27912 catgacataataatatcaaatgcaagtcaacaacatctcaaatatacattcataattcaagtaatgcatataacattatatcacatcataatcaacatca 28011  T
Q  157 acatatcttatacagcttcacagattataattaacctcttcattaagtcttaatgctgcccaaaggttcaactct 231  Q
    ||| |||||| ||| |||||||| ||||||||||| || ||||||||||| ||| || ||| |||||||||||||    
T  28012 acaaatcttaaacaacttcacaggttataattaacatcatcattaagtctcaatactaccccaaggttcaactct 28086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 67; Significance: 7e-30; HSPs: 4)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 28437 - 28552
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa---caacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||||| || |||||||||||||||||||   |||||||||||||||||||||||| ||||||| ||||||||||    
T  28437 gaccgactcatgcagcttagttaaataacaa-caacaacataggcagtatacaaaaacaacatgacataataatatcaattgcaattcaacaacatctta 28535  T
Q  98 tgtatacaaatattctt 114  Q
    | ||| ||||| |||||    
T  28536 tatattcaaatgttctt 28552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 11315 - 11390
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatatc 74  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| |||  || ||||| |||||||||||    
T  11315 gaccgactcatgcagcttagttaaataacaaacagcaacataggcagtatgcaaaccatcatgatataataatatc 11390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 2020 - 2095
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatatc 74  Q
    |||||||||||||||||||||||| |||||||||  |||||||||||||| |||  || ||||| |||||||||||    
T  2020 gaccgactcatgcagcttagttaaataacaaacacaaacataggcagtatgcaaaccatcatgatataataatatc 2095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 4575 - 4608
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaaca 34  Q
    |||||||||||||||||||||||| |||||||||    
T  4575 gaccgactcatgcagcttagttaaataacaaaca 4608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 93
Target Start/End: Complemental strand, 11540 - 11447
Alignment:
Q  2 accgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa---caacatgacataataatatcaatttcaattcatcaacat 93  Q
    ||||||||||||||||||||||| |||||| || ||||||||| |||||||||   |||||||||||||||||||||||||||||||||||||||    
T  11540 accgactcatgcagcttagttaaataacaa-caacaacataggtagtatacaaaaacaacatgacataataatatcaatttcaattcatcaacat 11447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 169 - 232
Target Start/End: Complemental strand, 11440 - 11377
Alignment:
Q  169 cagcttcacagattataattaacctcttcattaagtcttaatgctgcccaaaggttcaactctc 232  Q
    |||||||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||    
T  11440 cagcttcacagattataattaacctcatcattaagtcttaattctacccaaaggttcaactctc 11377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 4547 - 4779
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaacat---gacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||| ||||||||| |||||| || || |||||||||||| ||||| ||    || || |||||||||| |  |||||| ||||||||||    
T  4547 gaccgactcatgcaacttagttaaataacaa-caacagcataggcagtatgcaacagcagcaagatatcataatatcaaatataattcaacaacatctta 4645  T
Q  98 tgtatacaaatattcttcaagtaatgcataat-cattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctctt 196  Q
      ||| ||  ||| |||||||||||||||||| |||||||||||||||| |||| || |||||| | | | ||||| ||||| |||||||||||| ||||    
T  4646 aatattcatttatacttcaagtaatgcataatacattatatcacatcatgatcaacatcaacatct-taaaacagcctcacaaattataattaacatctt 4744  T
Q  197 cattaagtcttaatgctgcccaaaggttcaactct 231  Q
    || ||||||| ||| || ||  |||||||||||||    
T  4745 caataagtctcaatactacctcaaggttcaactct 4779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1124 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold1124
Description:

Target: scaffold1124; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 1977 - 2045
Alignment:
Q  78 ttcaattcatcaacatcttatgtatacaaatattcttcaagtaatgcataatcattatatcacatcata 146  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||  ||||||||    
T  1977 ttcaattcatcaacatcttatgtatacaattattcttcaagtaatgcataaacattataatacatcata 2045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 53; Significance: 1e-21; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 78 - 182
Target Start/End: Complemental strand, 21824 - 21721
Alignment:
Q  78 ttcaattcatcaacatcttatgtatacaaatattcttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcac 177  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||| |||||||  ||||| |||||| ||  ||||| || || ||||||||||    
T  21824 ttcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcttaatcaacacaaacatctcata-acagcttcac 21726  T
Q  178 agatt 182  Q
    |||||    
T  21725 agatt 21721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 78 - 182
Target Start/End: Complemental strand, 29716 - 29613
Alignment:
Q  78 ttcaattcatcaacatcttatgtatacaaatattcttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcac 177  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||| |||||||  ||||| |||||| ||  ||||| || || ||||||||||    
T  29716 ttcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcttaatcaacacaaacatctcata-acagcttcac 29618  T
Q  178 agatt 182  Q
    |||||    
T  29617 agatt 29613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 53; Significance: 1e-21; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 78 - 150
Target Start/End: Original strand, 12859 - 12931
Alignment:
Q  78 ttcaattcatcaacatcttatgtatacaaatattcttcaagtaatgcataatcattatatcacatcataatca 150  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||| |||||||  ||||||||||||    
T  12859 ttcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcataatca 12931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 11308 - 11450
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||| ||||||||| |||| |||||||||| | |||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  11308 gaccgactcatgcaacttagttaaataac-aacagcaacaca-gcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctca 11405  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcaca 141  Q
      ||| || ||||  ||||||||||||||| || |||||||||||    
T  11406 attattcacatatgattcaagtaatgcatatataattatatcaca 11450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 53640 - 53498
Alignment:
Q  8 tcatgcagcttagttaattaacaaacagcaacataggcagtat--acaacaacatgacataataatatcaatttcaattcatcaacatcttatgtataca 105  Q
    |||||||||||||||||| ||||||||||||||||||||||||  | |||||||||| |||| |||||||| | ||| |||||||||||| |  ||| ||    
T  53640 tcatgcagcttagttaataaacaaacagcaacataggcagtatgcaaaacaacatgatataacaatatcaaatgcaagtcatcaacatctcaaatattca 53541  T
Q  106 aatattcttcaagtaatgcata-atcattatatcacatcataa 147  Q
     ||||  ||||||||||| ||| |  |||||||||||| ||||    
T  53540 tatataattcaagtaatgtatatacaattatatcacattataa 53498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 150
Target Start/End: Complemental strand, 15483 - 15362
Alignment:
Q  31 aacagcaacataggcagtatacaa-caacatgacataataatatcaatttcaattcatcaacatcttatgtatacaaat-attcttcaagtaatgcat-a 127  Q
    |||| |||||||||||| |||||| || ||||||||||||||||||||||||||||| |||||||||   ||| ||||| |||||| ||||||||||| |    
T  15483 aacatcaacataggcagcatacaaacagcatgacataataatatcaatttcaattcaacaacatcttgaatattcaaataattctt-aagtaatgcataa 15385  T
Q  128 atcattatatcacatcataatca 150  Q
    | ||||||||||||| |||||||    
T  15384 aacattatatcacattataatca 15362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 32559 - 32636
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat--acaacaacatgacataataatatcaa 76  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||  | |||||||||| |||| ||||||||    
T  32559 gaccgactcatgcagcttagttaataaacaaacagcaacataggcagtatgcaaaacaacatgatataacaatatcaa 32636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 51981 - 51744
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaa---catgacataataatatcaatttcaattcatcaa-catctt 96  Q
    ||||||||||||||||||||||||  | |||||||| |||||||||| || ||| ||   || |||||||||||||||| | |||  || ||| |||||     
T  51981 gaccgactcatgcagcttagttaaacatcaaacagc-acataggcagcattcaaaaatagcaagacataataatatcaa-tgcaagccaacaatcatctc 51884  T
Q  97 atgtatacaaatattcttcaagtaatgcataatcattatatcacatcataatcatcaaca-acatatcttat-acagcttcacagattataattaacctc 194  Q
    |  ||| ||  ||  ||||||||||||| ||  ||||||||||||||||||  |||||||   |||||| || ||||||||||| ||| |||||||  ||    
T  51883 aattattcatttaaacttcaagtaatgcgtatacattatatcacatcataa--atcaacattaatatctcataacagcttcacaaattgtaattaatatc 51786  T
Q  195 ttcattaagtcttaatgctgcccaaaggttcaactctcgaca 236  Q
     |  | ||||||||||||| ||| ||||||||||||||||||    
T  51785 atattcaagtcttaatgctaccccaaggttcaactctcgaca 51744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2014 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold2014
Description:

Target: scaffold2014; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 1055 - 1151
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat--acaacaacatgacataataatatcaatttcaattcatcaacatct 95  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||  | |||| ||||| |||| |||||||| | | | ||||||||||||    
T  1055 gaccgactcatgcagcttagttaaataacaaacagcaacataggcagtatgcaaaacagcatgatataacaatatcaaatacgaatcatcaacatct 1151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 50; Significance: 9e-20; HSPs: 2)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 8489 - 8613
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatcttat 98  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||| |||  || ||||| |||| |||||||| | ||| |||||||||||| |     
T  8489 gaccgactcatgcagcttagttaaataacaaacaacaacataggcagtatgcaaaacagcatgatataacaatatcaaatgcaagtcatcaacatctcaa 8588  T
Q  99 gtatacaaatattcttcaagtaatg 123  Q
     ||| || ||||  |||||||||||    
T  8589 atattcatatataattcaagtaatg 8613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 6558 - 6607
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat 50  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  6558 gaccgactcatgcagcttagttaaataacaaacagcaacataggcagtat 6607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 12591 - 12687
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat--acaacaacatgacataataatatcaatttcaattcatcaacatct 95  Q
    |||||||||||| |||||||||||| ||||||||||||||||||||||||  | |||| ||||| |||| |||||||| | ||| ||||||||||||    
T  12591 gaccgactcatgtagcttagttaataaacaaacagcaacataggcagtatgcaaaacagcatgatataacaatatcaaatgcaagtcatcaacatct 12687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 155 - 232
Target Start/End: Complemental strand, 17928 - 17851
Alignment:
Q  155 caacatatcttatacagcttcacagattataattaacctcttcattaagtcttaatgctgcccaaaggttcaactctc 232  Q
    ||||| |||||| |||||||||||||||||||||||| || ||||||||||||||| || ||||||||||||| ||||    
T  17928 caacacatcttaaacagcttcacagattataattaacatcctcattaagtcttaatactacccaaaggttcaattctc 17851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 50; Significance: 9e-20; HSPs: 6)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 100397 - 100493
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatct 95  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| |||  || ||||| ||||||||||| | | ||| ||| ||||||||    
T  100397 gaccgactcatgcagcttagttaaataacaaacagcaacataggcagtatgcaaatcatcatgatataataatatcgaatgcaaatcaacaacatct 100493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 119898 - 119947
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat 50  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  119898 gaccgactcatgcagcttagttaaataacaaacagcaacataggcagtat 119947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 17582 - 17440
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| || ||||||| | |||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  17582 gaccgactcatgcagcttagttaaataac-aatagcaacaca-gcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctca 17485  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcaca 141  Q
      ||| || ||||  ||||||||||||||| || |||||||||||    
T  17484 attattcacatataattcaagtaatgcatatataattatatcaca 17440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 40268 - 40224
Alignment:
Q  5 gactcatgcagcttagttaattaacaaacagcaacataggcagta 49  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||    
T  40268 gactcatgcagcttagttaaataataaacagcaacataggcagta 40224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 94431 - 94558
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  94431 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctca 94528  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  94529 attattcacatataattcaagtaatgcata 94558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 101522 - 101571
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat 50  Q
    |||||| |||||||||||||||||  |||||||| |||||||||||||||    
T  101522 gaccgattcatgcagcttagttaaacaacaaacaacaacataggcagtat 101571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 15684 - 15759
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatatc 74  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||||||||||  || ||||| |||||||||||    
T  15684 gaccgactcgtgcagcttagttaaataacaaacagcaacataggcagtatacaaaccatcatgatataataatatc 15759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 135 - 231
Target Start/End: Original strand, 10323 - 10419
Alignment:
Q  135 tatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaatgctgcccaaaggttcaactct 231  Q
    |||||||||||||||| || ||||| |||||| ||||||||||||||||| |||||| || | ||||||||| ||| || ||| |||||||||||||    
T  10323 tatcacatcataatcaacatcaacacatcttaaacagcttcacagattattattaacatcattattaagtctcaatactaccccaaggttcaactct 10419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 60813 - 60761
Alignment:
Q  2 accgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa 54  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  60813 accgactcatgcagcttagttaataaacaaacagcaacataggcagtatacaa 60761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 129928 - 130024
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatct 95  Q
    |||||||||||||| ||||||||| ||||| ||||||||||||||||||| |||  || ||||| |||| |||||| | | ||| ||||||||||||    
T  129928 gaccgactcatgcatcttagttaaataacacacagcaacataggcagtatgcaaatcatcatgatataacaatatcgaatgcaagtcatcaacatct 130024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0716 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0716
Description:

Target: scaffold0716; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 4714 - 4856
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| | |||||||||   |||||||||||||||||||||||| | ||| ||| |||| ||| |    
T  4714 gaccgactcatgcagcttagttaaataac-aacagcaacaca-gcagtatacaaaaacaacatgacataataatatcaaatgcaagtcaacaacgtctca 4811  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcaca 141  Q
      ||| || ||||  ||||||||||||||| || |||||||||||    
T  4812 attattcacatataattcaagtaatgcatatataattatatcaca 4856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 53 - 201
Target Start/End: Complemental strand, 3574 - 3424
Alignment:
Q  53 aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcat 151  Q
    |||| ||||||||||||||||||| | ||| ||| |||||||| |  ||||||   ||  |||||||||||| || | |||||||||||||||||||||     
T  3574 aacagcatgacataataatatcaaatgcaagtcaacaacatctcaattatacactcataattcaagtaatgcgtataacattatatcacatcataatcaa 3475  T
Q  152 caacaacatatctt-atacagcttcacagattataattaacctcttcatta 201  Q
    || ||||| ||||| | ||||||||| |||||||||||||| || ||||||    
T  3474 catcaacacatcttaaaacagcttcatagattataattaacatcatcatta 3424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 38339 - 38389
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtata 51  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  38339 gaccgactcatgcagcttagttaatgaacaaacagcaacataggcagtata 38389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 25129 - 25179
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtata 51  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  25129 gaccgactcatgcagcttagttaataaacaaacagcaacataggcagtata 25179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 2904 - 2808
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatct 95  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||| |||  || ||||| |||| |||||||| | ||| ||| ||||||||    
T  2904 gaccgactcatgcagcttagttaaataacaaacagctacataggcagtatgcaaatcatcatgatataacaatatcaaatgcaaatcaacaacatct 2808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 10639 - 10543
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatct 95  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||| |||  || ||||| |||| |||||| | | ||| ||||||||||||    
T  10639 gaccgacttatgcagcttagttaaataacaaacagcaacataggcagtatgcaaatcatcatgatataacaatatcgaatgcaagtcatcaacatct 10543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 46; Significance: 2e-17; HSPs: 3)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 13151 - 13247
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat--acaacaacatgacataataatatcaatttcaattcatcaacatct 95  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||||  | |||| ||||| |||| |||||||| | ||| ||| ||||||||    
T  13151 gaccgactcatgcagcttagttaataaacaaacaacaacataggcagtatgcaaaacagcatgatataacaatatcaaatgcaaatcaacaacatct 13247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 16198 - 16121
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat--acaacaacatgacataataatatcaa 76  Q
    ||||||||||||||||||||||||| |||||||| ||||||||| |||||  | |||||||||| |||| ||||||||    
T  16198 gaccgactcatgcagcttagttaataaacaaacaacaacataggtagtatgcaaaacaacatgatataacaatatcaa 16121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 2684 - 2732
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagta 49  Q
    ||||||||||||||||||||||||| ||||| || ||||||||||||||    
T  2684 gaccgactcatgcagcttagttaataaacaagcaacaacataggcagta 2732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 8172 - 8119
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa 54  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  8172 gaccgactcatgcagcttagttaacaaacaaacagcaacataggcagtatacaa 8119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 19287 - 19336
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat 50  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  19287 gaccgactcatgcagcttagttaaataacaaacagcaacataggcagtat 19336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 11491 - 11562
Alignment:
Q  5 gactcatgcagcttagttaattaacaaacagcaacataggcagtat--acaacaacatgacataataatatc 74  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||  | |||| ||||| |||||||||||    
T  11491 gactcatgcagcttagttaattaacaatcagcaacataggcagtatgcaaaacatcatgatataataatatc 11562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 1167 - 1092
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatatc 74  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||| |||  || ||||| |||||||||||    
T  1167 gaccgactcatgcagcttagttaaataacaaacaacaacataggcagtatgcaaaccatcatgatataataatatc 1092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 38350 - 38279
Alignment:
Q  5 gactcatgcagcttagttaattaacaaacagcaacataggcagtat--acaacaacatgacataataatatc 74  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||  | |||| ||||| |||||||||||    
T  38350 gactcatgcagcttagttaattaacaatcagcaacataggcagtatgcaaaacatcatgatataataatatc 38279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 14795 - 14747
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagta 49  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  14795 gaccgactcatgcagcttagttaactaacaaacagcaacataggcagta 14747  T

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Target: scaffold0395 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 38 - 232
Target Start/End: Complemental strand, 1021 - 827
Alignment:
Q  38 acataggcagtatacaacaacatgacataataatatcaatttcaattcatcaacatcttatgtatacaaatattcttcaagtaatgcata-atcattata 136  Q
    ||||||||||||||||||| |||| |||||||||||||||  ||| ||| ||| |||| |  ||| |||  ||  ||||||||||||| | | |||||||    
T  1021 acataggcagtatacaacagcatggcataataatatcaatg-caagtcaacaaaatctcaaatattcaatcataattcaagtaatgcacataacattata 923  T
Q  137 tcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaatgctgcccaaaggttcaactctc 232  Q
    ||||||| |||||  || ||||| |||||| ||||||||||| || |||| || | ||  |||||||||| ||| || ||  ||||||||||||||    
T  922 tcacatcgtaatcgacatcaacacatcttaaacagcttcacatatcataaatagcatcaccattaagtctcaatactacctcaaggttcaactctc 827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1403 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold1403
Description:

Target: scaffold1403; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 573 - 619
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcag 47  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||    
T  573 gaccgactcatgcagcttagttaataaacaaacagcaacataggcag 619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 4317 - 4459
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| | | |||||||   |||||||||||||||||||||||||| ||| ||| |||| ||| |    
T  4317 gaccgactcatgcagcttagttaaataac-aacagcaacaca-gtagtatacaaaaacaacatgacataataatatcaattgcaaatcaacaacgtctca 4414  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcaca 141  Q
      ||  || ||||  ||||||||||||||| || |||||||||||    
T  4415 attaatcacatataattcaagtaatgcatatataattatatcaca 4459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 6382 - 6332
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtata 51  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  6382 gaccgactcatgcaacttagttaatgaacaaacagcaacataggcagtata 6332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 13836 - 13793
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacatagg 44  Q
    ||||||||||||||||||||||||| |||||||| |||||||||    
T  13836 gaccgactcatgcagcttagttaatgaacaaacaacaacatagg 13793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 3)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 78345 - 78391
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcag 47  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||    
T  78345 gaccgactcatgcagcttagttaataaacaaacagcaacataggcag 78391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 129068 - 129021
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagta 49  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  129068 gaccgactcatgcagcttagttaa-taacaaacagcaacataggcagta 129021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 116450 - 116544
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac--aacaacatgacataataatatcaatttcaattcatcaacatct 95  Q
    |||||||||||||||||||||||| |||| |||||| ||| |  ||||||||  |||| ||||||||||| ||||||| | ||| ||| ||||||||    
T  116450 gaccgactcatgcagcttagttaaataac-aacagcgacaca-acagtatacaaaacagcatgacataatcatatcaaatgcaagtcaacaacatct 116544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 160707 - 160784
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatatcaa 76  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||| |||  || ||||| |||| ||||||||    
T  160707 gaccgactcatgcagcttagttaaataacaatcagcaacataggcagtatgcaaatcatcatgatataacaatatcaa 160784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 501104 - 501246
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| | ||| |||||   |||||||||||||||||||||||| | ||| ||| |||| ||| |    
T  501104 gaccgactcatgcagcttagttaaataac-aacagcaacaca-gcaatatacaaaaacaacatgacataataatatcaaatgcaagtcaacaacgtctca 501201  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcaca 141  Q
      ||| || ||||  ||||||||||||||| || |||||||||||    
T  501202 attattcacatataattcaagtaatgcatatataattatatcaca 501246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 85722 - 85646
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaa 76  Q
    |||||||||||||||||||||||| |||| |||||| ||| |  ||||||||   |||| |||||||||||||||||||    
T  85722 gaccgactcatgcagcttagttaaataac-aacagcgacaca-acagtatacaaaaacagcatgacataataatatcaa 85646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1765 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold1765
Description:

Target: scaffold1765; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 1105 - 1154
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat 50  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  1105 gaccgactcatgcagcttagttaaataacaaacaacaacataggcagtat 1154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 6835 - 6884
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat 50  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  6835 gaccgactcatgcagctcagttaaataacaaacagcaacataggcagtat 6884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 6634 - 6683
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat 50  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  6634 gaccgactcatgcagcttagttaaataacaaacaacaacataggcagtat 6683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 14014 - 14063
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat 50  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  14014 gaccgactcatgcagcttagttaaataacaaacaacaacataggcagtat 14063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 5666 - 5715
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat 50  Q
    ||||||||||||||||||||| || |||||||||||||||||||||||||    
T  5666 gaccgactcatgcagcttagtaaaataacaaacagcaacataggcagtat 5715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 6221 - 6172
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat 50  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  6221 gaccgactcatgcagcttagttaaataacaaacagtaacataggcagtat 6172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 2743 - 2694
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat 50  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  2743 gaccgactcatgcagcttagttaaataacaaacatcaacataggcagtat 2694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 23981 - 23932
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat 50  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  23981 gaccgactcatgtagcttagttaaataacaaacagcaacataggcagtat 23932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 38800 - 38704
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat--acaacaacatgacataataatatcaatttcaattcatcaacatct 95  Q
    |||| ||||||||| ||||||||| |||||||||||||||||| ||||||  | |||||||||| |||| |||||||| | ||| ||||||| ||||    
T  38800 gacctactcatgcaccttagttaaataacaaacagcaacatagacagtatgcaaaacaacatgatataacaatatcaaatgcaagtcatcaatatct 38704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 22768 - 22672
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatct 95  Q
    |||||||||||||||||||||||| ||||||||||| |||||| |||||| |||  || ||||| |||| |||||| | | ||| ||||||||||||    
T  22768 gaccgactcatgcagcttagttaaataacaaacagcgacatagacagtatgcaaatcatcatgatataacaatatcgaatgcaagtcatcaacatct 22672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 82092 - 82234
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||| ||||||||||| |||| |||||||||| | | |||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  82092 gaccgactcatgaagcttagttaaataac-aacagcaacaca-gtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctca 82189  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcaca 141  Q
      ||| || ||||  ||||||||||||||| || |||||||||||    
T  82190 attattcacatataattcaagtaatgcatatataattatatcaca 82234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 20520 - 20394
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac--aacaacatgacataataatatcaatttcaattcatcaacatcttat 98  Q
    |||||||||||||||||||||||| |||| |||||||||| |  ||||||||  |||||||||||||||||||||||| | ||| ||| |||| ||| |     
T  20520 gaccgactcatgcagcttagttaaataac-aacagcaacaca-tcagtatacaaaacaacatgacataataatatcaaatgcaagtcaacaacgtctcaa 20423  T
Q  99 gtatacaaatattcttcaagtaatgcata 127  Q
     ||| || ||||  |||||||||||||||    
T  20422 ttattcacatataattcaagtaatgcata 20394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 142
Target Start/End: Original strand, 128827 - 128917
Alignment:
Q  53 aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatacaaatattcttcaagtaatg--cataatcattatatcacat 142  Q
    |||| ||||||||||||||||||| | ||| ||| ||||||||||  ||| ||| ||| ||||||||||||  ||||| |||||||||||||    
T  128827 aacagcatgacataataatatcaaatgcaagtcaacaacatcttaaatattcaattatacttcaagtaatgtacataa-cattatatcacat 128917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 15875 - 15826
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat 50  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  15875 gaccgactcatgcagcttagttaaataacaaacaacaacataggcagtat 15826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 168 - 236
Target Start/End: Original strand, 20596 - 20664
Alignment:
Q  168 acagcttcacagattataattaacctcttcattaagtcttaatgctgcccaaaggttcaactctcgaca 236  Q
    |||||||||||||||||| ||||| || ||||||||||||||||||   | ||||||||||||||||||    
T  20596 acagcttcacagattatagttaacatcatcattaagtcttaatgctattccaaggttcaactctcgaca 20664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 18121 - 18050
Alignment:
Q  5 gactcatgcagcttagttaattaacaaacagcaacataggcagtat--acaacaacatgacataataatatc 74  Q
    ||||||||||||||||||||||||||| |||||||||| ||| |||  |||||| ||||| |||||||||||    
T  18121 gactcatgcagcttagttaattaacaatcagcaacatatgcattatgcacaacatcatgatataataatatc 18050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 7)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 62222 - 62270
Alignment:
Q  2 accgactcatgcagcttagttaattaacaaacagcaacataggcagtat 50  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||    
T  62222 accgactcatgcagcttagttaaacaacaaacagcaacataggcagtat 62270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 134231 - 134358
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtataca---acaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| |  |||||||||   ||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  134231 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaatacagcatgacataataatatcaaatgcaagtcaacaacgtctca 134328  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  134329 attattcacatataattcaagtaatgcata 134358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 136700 - 136827
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtataca---acaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| |  |||||||||   ||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  136700 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaatacagcatgacataataatatcaaatgcaagtcaacaacgtctca 136797  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  136798 attattcacatataattcaagtaatgcata 136827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 139169 - 139296
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtataca---acaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| |  |||||||||   ||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  139169 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaatacagcatgacataataatatcaaatgcaagtcaacaacgtctca 139266  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  139267 attattcacatataattcaagtaatgcata 139296  T

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Target: scaffold0028; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 144107 - 144234
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtataca---acaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| |  |||||||||   ||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  144107 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaatacagcatgacataataatatcaaatgcaagtcaacaacgtctca 144204  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  144205 attattcacatataattcaagtaatgcata 144234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 132681 - 132722
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacata 42  Q
    |||||||||||||||||||| ||| |||||||||||||||||    
T  132681 gaccgactcatgcagcttagataaataacaaacagcaacata 132722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 141638 - 141765
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtataca---acaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||| ||||||||||| |||| |||||||||| |  |||||||||   ||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  141638 gaccgactcatgtagcttagttaaataac-aacagcaacaca-acagtatacaaatacagcatgacataataatatcaaatgcaagtcaacaacgtctca 141735  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  141736 attattcacatataattcaagtaatgcata 141765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0454 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0454
Description:

Target: scaffold0454; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 10793 - 10935
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| | |||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  10793 gaccgactcatgcagcttagttaaataac-aacagcaacaca-gcagtatacaaaaacatcatgacataataatatcaaatgcaagtcaacaacgtctca 10890  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcaca 141  Q
      ||| || ||||  || |||||||||||| || |||||||||||    
T  10891 attattcacatataatttaagtaatgcatatataattatatcaca 10935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 2698 - 2748
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtata 51  Q
    ||||||||||||||||||||| |||  ||||||||||||||||||||||||    
T  2698 gaccgactcatgcagcttagtcaatagacaaacagcaacataggcagtata 2748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 1132 - 1083
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat 50  Q
    |||||||||||||||||||||||| ||||||||| ||||||||| |||||    
T  1132 gaccgactcatgcagcttagttaaataacaaacaacaacataggtagtat 1083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 45890 - 45841
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat 50  Q
    |||||||||||||||||||||||| |||||||||| || |||||||||||    
T  45890 gaccgactcatgcagcttagttaaataacaaacagaaaaataggcagtat 45841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 10550 - 10646
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatct 95  Q
    ||||||||||||||||||  |||| ||||||||| ||||||||||||||| |||  || ||||| |||| |||||| | | ||| ||||||||||||    
T  10550 gaccgactcatgcagcttttttaaataacaaacaacaacataggcagtatgcaaatcatcatgatataacaatatcgaatgcaagtcatcaacatct 10646  T

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Target: scaffold0476 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 12789 - 12884
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatc 94  Q
    |||||||||||||||||||| ||| ||||||||| ||||||||||| ||| |||  || ||||| |||| |||||| | | ||| |||||||||||    
T  12789 gaccgactcatgcagcttagctaaataacaaacaacaacataggcaatatgcaaatcatcatgatataacaatatcgaatgcaagtcatcaacatc 12884  T

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Target: scaffold0142 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 16804 - 16880
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaa 76  Q
    |||||||||||||||||||||||| |||| |||||||||| | | |||||||   ||||||||||||||||||||||||    
T  16804 gaccgactcatgcagcttagttaaataac-aacagcaacaca-gtagtatacaaaaacaacatgacataataatatcaa 16880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 12962 - 13057
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatc 94  Q
    ||||||||||||| ||| |||||| ||||||||| ||||||||||||||| |||  || ||||| |||| |||||| | | ||| |||||||||||    
T  12962 gaccgactcatgctgctcagttaaataacaaacaacaacataggcagtatgcaaatcagcatgatataacaatatcgaatgcaagtcatcaacatc 13057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 97028 - 97076
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagta 49  Q
    |||| |||||||||||||||||||| || ||||||||||||||||||||    
T  97028 gacccactcatgcagcttagttaataaataaacagcaacataggcagta 97076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 106306 - 106354
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagta 49  Q
    |||| |||||||||||||||||||| || ||||||||||||||||||||    
T  106306 gacccactcatgcagcttagttaataaataaacagcaacataggcagta 106354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0444 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 13412 - 13539
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  13412 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctca 13509  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  13510 attattcacatataattcaagtaatgcata 13539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 20767 - 20894
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  20767 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctca 20864  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  20865 attattcacatataattcaagtaatgcata 20894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 37841 - 37968
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  37841 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctca 37938  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  37939 attattcacatataattcaagtaatgcata 37968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1439 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold1439
Description:

Target: scaffold1439; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 126 - 268
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa---caacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||| ||||||||||||||| |||||| |||||||| |   |||||||||   |||||||||||||||||||||| | ||| ||| |||| ||| |    
T  126 gaccgacttatgcagcttagttaaataacaa-cagcaacacaat-agtatacaaaaacaacatgacataataatatcaaatgcaaatcaacaacgtctca 223  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcaca 141  Q
      ||| || ||||  ||||||||||||||| || |||||||||||    
T  224 attattcacatataattcaagtaatgcatatataattatatcaca 268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 103729 - 103679
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtata 51  Q
    |||||||| |||||||||||||||| || ||||||||||||||| ||||||    
T  103729 gaccgactaatgcagcttagttaataaataaacagcaacataggtagtata 103679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 267683 - 267733
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtata 51  Q
    |||||||||||||| |||||||||| |||||||| ||||||| ||||||||    
T  267683 gaccgactcatgcaacttagttaataaacaaacatcaacatatgcagtata 267733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1984 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold1984
Description:

Target: scaffold1984; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 152 - 201
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat 50  Q
    |||||| |||||||||||||||||  |||||||| |||||||||||||||    
T  152 gaccgattcatgcagcttagttaaacaacaaacaacaacataggcagtat 201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 206619 - 206575
Alignment:
Q  4 cgactcatgcagcttagttaattaacaaacagcaacataggcagta 49  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||    
T  206619 cgactcatgcagcttagttaataaac-aacagcaacataggcagta 206575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 29952 - 30028
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaa 76  Q
    |||||||||||||||||||||||| |||| |||||||||| |  ||||||||   |||| |||||||||||||||||||    
T  29952 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaa 30028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 13967 - 14094
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||| ||| |||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  13967 gaccgactcatgcagcttagataaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctca 14064  T
Q  98 tgtatacaaatattcttcaagtaatgcata 127  Q
      ||| || ||||  |||||||||||||||    
T  14065 attattcacatataattcaagtaatgcata 14094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 8159 - 8059
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaa--ca--acatgacataataatatcaatttcaattcatcaacatctt 96  Q
    ||||||| ||||||||||| |||| ||||||| |||| |||||||||||| |||  ||   ||||| ||||||||||||| |  |||||| |||||||||    
T  8159 gaccgacgcatgcagcttaattaaataacaaatagcagcataggcagtatgcaaatcagctcatgatataataatatcaaatgaaattcaacaacatctt 8060  T
Q  97 a 97  Q
    |    
T  8059 a 8059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0363 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0363
Description:

Target: scaffold0363; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 9262 - 9404
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtat---acaacaacatgacataataatatcaatttcaattcatcaacatctta 97  Q
    |||||||||||||||||||||||| |||| |||||||||| |  ||||||   | |||| ||||||||||||||||||| | ||| ||| |||| ||| |    
T  9262 gaccgactcatgcagcttagttaaataac-aacagcaacaca-acagtatataaaaacatcatgacataataatatcaaatgcaagtcaacaacgtctca 9359  T
Q  98 tgtatacaaatattcttcaagtaatgcata-atcattatatcaca 141  Q
      ||| || ||||  || |||||||||||| || |||||||||||    
T  9360 attattcacatataatttaagtaatgcatatataattatatcaca 9404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 28868 - 28818
Alignment:
Q  1 gaccgactcatgcagcttagttaattaaca-aacagcaacataggcagtat 50  Q
    ||||||||||||||||||||||||  ||||  |||||||||||||||||||    
T  28868 gaccgactcatgcagcttagttaaacaacattacagcaacataggcagtat 28818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 32121 - 32162
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacata 42  Q
    |||||||||||||||||||| ||| ||||||||| |||||||    
T  32121 gaccgactcatgcagcttagataaataacaaacaacaacata 32162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 193070 - 192997
Alignment:
Q  5 gactcatgcagcttagttaattaacaaacagcaacataggcagtat----acaacaacatgacataataatatca 75  Q
    |||||||||| |||||||||||||| ||||||| ||||||||| ||    |||||| |||||||||| |||||||    
T  193070 gactcatgcaacttagttaattaac-aacagcagcataggcagaatcacaacaacatcatgacataacaatatca 192997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 40420 - 40496
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaac---atgacataataatatcaa 76  Q
    ||||||||| |||||||||||||| |||| |||||||||| |  |||||||||| |||   ||||||||||||||||||    
T  40420 gaccgactcgtgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacaggatgacataataatatcaa 40496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 161232 - 161156
Alignment:
Q  1 gaccgactcatgcagcttagttaattaacaaacagcaacataggcagtatacaacaac---atgacataataatatcaa 76  Q
    |||||||||||||||||||||||| || | |||||| ||| | ||||||||||| |||   ||||||||||||||||||    
T  161232 gaccgactcatgcagcttagttaaatatc-aacagcgacaca-gcagtatacaaaaacataatgacataataatatcaa 161156  T

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Target: scaffold0004 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 182
Target Start/End: Original strand, 69930 - 70000
Alignment:
Q  113 ttcaagtaatgca--taatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagatt 182  Q
    |||||||||||||  ||||||||||||||||||||| ||| ||  ||||| || || |||||||||||||||    
T  69930 ttcaagtaatgcaattaatcattatatcacatcatattcaacactaacatctcata-acagcttcacagatt 70000  T

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