View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16866_high_3 (Length: 214)

Name: NF16866_high_3
Description: NF16866
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16866_high_3
NF16866_high_3
[»] scaffold0507 (14 HSPs)
scaffold0507 (155-214)||(6428-6487)
scaffold0507 (155-214)||(6356-6415)
scaffold0507 (155-214)||(3330-3389)
scaffold0507 (155-214)||(6570-6629)
scaffold0507 (155-214)||(3258-3317)
scaffold0507 (155-214)||(6534-6593)
scaffold0507 (155-214)||(3294-3353)
scaffold0507 (155-214)||(3366-3425)
scaffold0507 (155-214)||(6392-6451)
scaffold0507 (160-214)||(3227-3281)
scaffold0507 (155-212)||(6502-6557)
scaffold0507 (155-210)||(6324-6379)
scaffold0507 (159-214)||(6464-6519)
scaffold0507 (155-197)||(3402-3444)
[»] scaffold0462 (9 HSPs)
scaffold0462 (155-214)||(7592-7651)
scaffold0462 (155-214)||(7520-7579)
scaffold0462 (155-212)||(2052-2109)
scaffold0462 (155-214)||(2014-2073)
scaffold0462 (155-214)||(7556-7615)
scaffold0462 (155-212)||(7666-7721)
scaffold0462 (170-214)||(7698-7742)
scaffold0462 (159-214)||(7628-7683)
scaffold0462 (159-212)||(7772-7823)
[»] chr3 (43 HSPs)
chr3 (155-214)||(16978532-16978591)
chr3 (156-214)||(43400635-43400693)
chr3 (155-214)||(14871524-14871583)
chr3 (155-214)||(43400563-43400622)
chr3 (155-214)||(16978710-16978769)
chr3 (155-214)||(35962462-35962521)
chr3 (155-214)||(16978638-16978697)
chr3 (155-210)||(16978678-16978733)
chr3 (155-214)||(35962498-35962557)
chr3 (155-214)||(43400599-43400658)
chr3 (155-209)||(43400532-43400586)
chr3 (155-200)||(11914788-11914833)
chr3 (165-214)||(24513268-24513317)
chr3 (166-214)||(35962437-35962485)
chr3 (155-214)||(6158094-6158153)
chr3 (159-214)||(13026967-13027022)
chr3 (155-214)||(16978496-16978555)
chr3 (159-214)||(18899653-18899708)
chr3 (159-214)||(34853175-34853230)
chr3 (160-214)||(6158130-6158184)
chr3 (155-197)||(14871560-14871602)
chr3 (155-197)||(24513249-24513291)
chr3 (165-214)||(11914762-11914811)
chr3 (169-214)||(24180756-24180801)
chr3 (155-200)||(31414832-31414877)
chr3 (170-214)||(23173556-23173600)
chr3 (155-214)||(16613710-16613769)
chr3 (155-214)||(22045484-22045543)
chr3 (155-194)||(24180778-24180817)
chr3 (155-197)||(12204168-12204210)
chr3 (159-212)||(16613466-16613520)
chr3 (155-193)||(16978623-16978661)
chr3 (159-212)||(22045733-22045787)
chr3 (155-197)||(35962534-35962576)
chr3 (165-214)||(10834784-10834833)
chr3 (155-196)||(12269021-12269062)
chr3 (165-214)||(16978568-16978617)
chr3 (165-214)||(16978746-16978795)
chr3 (165-214)||(54519783-54519832)
chr3 (159-214)||(16613501-16613554)
chr3 (159-214)||(22045699-22045752)
chr3 (159-195)||(22651540-22651576)
chr3 (159-214)||(22651557-22651610)
[»] chr5 (25 HSPs)
chr5 (156-214)||(27768106-27768164)
chr5 (155-214)||(17010343-17010402)
chr5 (156-214)||(17874747-17874805)
chr5 (155-214)||(17010307-17010366)
chr5 (155-214)||(27768177-27768236)
chr5 (155-214)||(27768213-27768272)
chr5 (155-214)||(17874711-17874770)
chr5 (155-214)||(27768141-27768200)
chr5 (155-213)||(17010272-17010330)
chr5 (155-209)||(17874680-17874734)
chr5 (160-214)||(31454623-31454677)
chr5 (165-214)||(31454565-31454614)
chr5 (155-212)||(17010417-17010472)
chr5 (170-214)||(23537955-23537999)
chr5 (159-214)||(17010379-17010434)
chr5 (155-214)||(22469406-22469465)
chr5 (159-214)||(22469442-22469497)
chr5 (159-214)||(29447477-29447532)
chr5 (155-205)||(27768249-27768299)
chr5 (155-193)||(31454550-31454588)
chr5 (155-193)||(31454608-31454646)
chr5 (159-200)||(262616-262657)
chr5 (159-200)||(6765298-6765339)
chr5 (170-214)||(22358584-22358628)
chr5 (165-209)||(31454512-31454556)
[»] chr4 (26 HSPs)
chr4 (155-212)||(15884763-15884820)
chr4 (155-214)||(15007736-15007795)
chr4 (155-214)||(15007664-15007723)
chr4 (155-214)||(15007628-15007687)
chr4 (155-214)||(15884835-15884894)
chr4 (155-214)||(15007700-15007759)
chr4 (159-214)||(54604823-54604878)
chr4 (159-214)||(9637588-9637643)
chr4 (155-214)||(15884799-15884858)
chr4 (159-213)||(15989385-15989439)
chr4 (170-214)||(4828826-4828870)
chr4 (170-214)||(4832121-4832165)
chr4 (170-214)||(4835416-4835460)
chr4 (159-214)||(12841112-12841165)
chr4 (165-209)||(40619319-40619363)
chr4 (159-214)||(4859079-4859134)
chr4 (159-214)||(17142508-17142563)
chr4 (158-196)||(13844040-13844078)
chr4 (155-189)||(15481874-15481908)
chr4 (155-197)||(54604804-54604846)
chr4 (155-200)||(4859111-4859156)
chr4 (165-214)||(15007772-15007821)
chr4 (165-214)||(24048193-24048242)
chr4 (159-195)||(9922846-9922882)
chr4 (159-195)||(11480239-11480275)
chr4 (159-195)||(12841095-12841131)
[»] scaffold0028 (6 HSPs)
scaffold0028 (155-214)||(63432-63491)
scaffold0028 (155-209)||(63365-63419)
scaffold0028 (165-214)||(63574-63623)
scaffold0028 (166-214)||(63396-63444)
scaffold0028 (155-212)||(63542-63597)
scaffold0028 (159-212)||(63506-63559)
[»] chr6 (19 HSPs)
chr6 (155-214)||(15174870-15174929)
chr6 (156-213)||(20734731-20734788)
chr6 (155-214)||(15174942-15175001)
chr6 (156-214)||(15174907-15174965)
chr6 (156-214)||(20734803-20734861)
chr6 (165-214)||(17378377-17378426)
chr6 (155-214)||(29417418-29417477)
chr6 (155-209)||(20734838-20734892)
chr6 (170-214)||(29849036-29849080)
chr6 (159-214)||(15174838-15174893)
chr6 (155-214)||(20734766-20734825)
chr6 (159-214)||(23351692-23351747)
chr6 (155-209)||(15174978-15175032)
chr6 (155-197)||(17378403-17378445)
chr6 (160-214)||(20734699-20734753)
chr6 (159-212)||(25621556-25621607)
chr6 (165-212)||(15174810-15174855)
chr6 (159-195)||(18927272-18927308)
chr6 (152-196)||(25957261-25957305)
[»] chr8 (27 HSPs)
chr8 (157-214)||(19879145-19879202)
chr8 (155-211)||(41681959-41682015)
chr8 (155-214)||(26453646-26453705)
chr8 (155-214)||(41681995-41682054)
chr8 (155-214)||(39833350-39833409)
chr8 (160-214)||(41681928-41681982)
chr8 (165-214)||(26453682-26453731)
chr8 (165-214)||(39833386-39833435)
chr8 (155-211)||(19879112-19879168)
chr8 (159-214)||(16402343-16402398)
chr8 (155-214)||(19879073-19879132)
chr8 (155-214)||(37514972-37515031)
chr8 (155-212)||(19879216-19879271)
chr8 (160-214)||(21580485-21580539)
chr8 (155-200)||(41682031-41682076)
chr8 (170-214)||(20459312-20459356)
chr8 (174-213)||(20453705-20453744)
chr8 (155-197)||(21580516-21580558)
chr8 (155-197)||(39833331-39833373)
chr8 (165-214)||(16402313-16402362)
chr8 (156-197)||(37514953-37514994)
chr8 (157-197)||(16402377-16402417)
chr8 (159-195)||(17461751-17461787)
chr8 (159-214)||(21917862-21917915)
chr8 (159-211)||(23477829-23477881)
chr8 (157-212)||(27473012-27473068)
chr8 (170-214)||(37515008-37515052)
[»] scaffold0156 (5 HSPs)
scaffold0156 (155-214)||(14990-15049)
scaffold0156 (155-214)||(14954-15013)
scaffold0156 (155-214)||(14918-14977)
scaffold0156 (155-214)||(15096-15155)
scaffold0156 (155-212)||(15064-15119)
[»] chr2 (27 HSPs)
chr2 (155-214)||(21082453-21082512)
chr2 (155-214)||(21082525-21082584)
chr2 (155-214)||(22500543-22500602)
chr2 (155-214)||(22508477-22508536)
chr2 (155-214)||(22500507-22500566)
chr2 (155-214)||(22508441-22508500)
chr2 (155-214)||(24883046-24883105)
chr2 (155-209)||(21082561-21082615)
chr2 (155-209)||(22500476-22500530)
chr2 (156-214)||(34492952-34493010)
chr2 (165-214)||(22500579-22500628)
chr2 (165-214)||(22508513-22508562)
chr2 (160-213)||(24883083-24883136)
chr2 (165-214)||(24917340-24917389)
chr2 (155-211)||(9974587-9974643)
chr2 (166-214)||(21082500-21082548)
chr2 (155-214)||(22702634-22702693)
chr2 (155-214)||(26895867-26895926)
chr2 (160-214)||(9974620-9974674)
chr2 (155-209)||(22508410-22508464)
chr2 (155-209)||(24883015-24883069)
chr2 (159-214)||(34492922-34492974)
chr2 (155-197)||(24917321-24917363)
chr2 (159-212)||(27485757-27485811)
chr2 (159-214)||(13102101-13102154)
chr2 (165-212)||(21082394-21082439)
chr2 (159-195)||(23285394-23285430)
[»] chr1 (23 HSPs)
chr1 (159-214)||(29764728-29764783)
chr1 (155-207)||(51326308-51326360)
chr1 (155-214)||(20971355-20971414)
chr1 (155-214)||(29764760-29764819)
chr1 (155-207)||(46198885-46198937)
chr1 (155-197)||(23072534-23072576)
chr1 (155-214)||(20587357-20587416)
chr1 (155-214)||(20591895-20591954)
chr1 (155-214)||(29764796-29764855)
chr1 (155-209)||(29764832-29764886)
chr1 (155-212)||(19209052-19209109)
chr1 (155-200)||(51274895-51274940)
chr1 (159-214)||(19209086-19209141)
chr1 (159-214)||(20587393-20587448)
chr1 (159-214)||(20591931-20591986)
chr1 (158-193)||(43690329-43690364)
chr1 (159-212)||(13883202-13883253)
chr1 (159-212)||(13883304-13883358)
chr1 (158-196)||(20636342-20636380)
chr1 (155-197)||(20971391-20971433)
chr1 (155-197)||(46198956-46198998)
chr1 (155-200)||(20587335-20587380)
chr1 (155-200)||(20591873-20591918)
[»] scaffold1458 (2 HSPs)
scaffold1458 (155-214)||(1638-1697)
scaffold1458 (155-197)||(1619-1661)
[»] scaffold0515 (2 HSPs)
scaffold0515 (155-214)||(3806-3865)
scaffold0515 (155-197)||(3787-3829)
[»] scaffold0306 (5 HSPs)
scaffold0306 (155-214)||(3806-3865)
scaffold0306 (155-214)||(9283-9342)
scaffold0306 (165-214)||(9257-9306)
scaffold0306 (155-197)||(3787-3829)
scaffold0306 (155-197)||(9319-9361)
[»] scaffold0019 (3 HSPs)
scaffold0019 (155-214)||(26116-26175)
scaffold0019 (159-214)||(26084-26139)
scaffold0019 (155-214)||(26152-26211)
[»] chr7 (41 HSPs)
chr7 (157-214)||(16551377-16551434)
chr7 (157-214)||(16614228-16614285)
chr7 (155-214)||(32161342-32161400)
chr7 (155-214)||(32161377-32161436)
chr7 (165-214)||(8939622-8939671)
chr7 (165-214)||(32161451-32161500)
chr7 (155-214)||(1490770-1490829)
chr7 (155-214)||(16458612-16458671)
chr7 (159-214)||(16551343-16551398)
chr7 (159-214)||(16614264-16614319)
chr7 (158-209)||(32161480-32161531)
chr7 (160-211)||(48811535-48811586)
chr7 (155-197)||(8939603-8939645)
chr7 (171-212)||(14933384-14933425)
chr7 (171-212)||(15356819-15356860)
chr7 (171-212)||(15360977-15361018)
chr7 (170-214)||(837909-837953)
chr7 (170-214)||(1203089-1203133)
chr7 (159-214)||(15719511-15719564)
chr7 (170-214)||(16109856-16109900)
chr7 (155-199)||(30822186-30822230)
chr7 (170-214)||(37728382-37728426)
chr7 (155-214)||(6373417-6373476)
chr7 (159-214)||(11660503-11660558)
chr7 (155-214)||(13254945-13255004)
chr7 (155-214)||(13254981-13255040)
chr7 (159-214)||(13255017-13255072)
chr7 (155-214)||(30822150-30822209)
chr7 (165-214)||(16551315-16551362)
chr7 (155-197)||(16551411-16551453)
chr7 (155-197)||(16614209-16614251)
chr7 (165-214)||(16614300-16614347)
chr7 (155-213)||(48811497-48811555)
chr7 (155-195)||(6373562-6373602)
chr7 (159-195)||(15719494-15719530)
chr7 (155-199)||(16458591-16458635)
chr7 (159-211)||(16458651-16458703)
chr7 (159-195)||(16998077-16998113)
chr7 (159-199)||(30822118-30822158)
chr7 (170-214)||(34956788-34956832)
chr7 (165-209)||(48811465-48811509)
[»] scaffold0057 (2 HSPs)
scaffold0057 (155-207)||(71039-71091)
scaffold0057 (155-197)||(71110-71152)
[»] scaffold0371 (4 HSPs)
scaffold0371 (155-214)||(11627-11686)
scaffold0371 (159-214)||(11595-11650)
scaffold0371 (155-214)||(11663-11722)
scaffold0371 (155-200)||(11699-11744)
[»] scaffold0599 (2 HSPs)
scaffold0599 (155-200)||(6539-6584)
scaffold0599 (165-214)||(6513-6562)
[»] scaffold0089 (1 HSPs)
scaffold0089 (157-214)||(1493-1550)
[»] scaffold0607 (2 HSPs)
scaffold0607 (155-214)||(1857-1916)
scaffold0607 (159-214)||(1893-1948)
[»] scaffold0338 (2 HSPs)
scaffold0338 (155-214)||(4669-4728)
scaffold0338 (159-213)||(4601-4655)
[»] scaffold0335 (5 HSPs)
scaffold0335 (155-214)||(37-96)
scaffold0335 (159-214)||(109-164)
scaffold0335 (155-214)||(9116-9175)
scaffold0335 (159-211)||(9191-9243)
scaffold0335 (155-214)||(73-132)
[»] scaffold0188 (2 HSPs)
scaffold0188 (167-214)||(3465-3512)
scaffold0188 (169-214)||(937-982)
[»] scaffold0026 (1 HSPs)
scaffold0026 (165-212)||(145555-145602)
[»] scaffold0117 (1 HSPs)
scaffold0117 (169-214)||(41616-41661)
[»] scaffold0066 (1 HSPs)
scaffold0066 (170-214)||(47830-47874)
[»] scaffold1508 (1 HSPs)
scaffold1508 (166-209)||(285-328)
[»] scaffold0216 (2 HSPs)
scaffold0216 (155-214)||(20866-20925)
scaffold0216 (165-214)||(20902-20951)
[»] scaffold0021 (1 HSPs)
scaffold0021 (155-214)||(145676-145735)
[»] scaffold0436 (1 HSPs)
scaffold0436 (155-197)||(7555-7597)
[»] scaffold0810 (1 HSPs)
scaffold0810 (159-196)||(2511-2548)
[»] scaffold0780 (1 HSPs)
scaffold0780 (156-197)||(4136-4177)
[»] scaffold0076 (2 HSPs)
scaffold0076 (159-214)||(26886-26939)
scaffold0076 (159-195)||(26920-26956)
[»] scaffold0058 (1 HSPs)
scaffold0058 (160-212)||(1149-1201)


Alignment Details
Target: scaffold0507 (Bit Score: 56; Significance: 2e-23; HSPs: 14)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 6487 - 6428
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  6487 gttgtgttgcttatattattatgagatgatgattatgttgtgttgtgtatattattatga 6428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 6415 - 6356
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  6415 gttgtgttgtttatattattatgagatgatgattatgttgtgttgtgtatattattatga 6356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 155 - 214
Target Start/End: Original strand, 3330 - 3389
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||    
T  3330 gttgtgttgcttatattattatgagatgatgattatgttgtgttgtttatattgttatga 3389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 6629 - 6570
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  6629 gttgtgttgtttatattattatgagatgatgattatgttgtgttgtttatattattatga 6570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 155 - 214
Target Start/End: Original strand, 3258 - 3317
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||| ||||||||||||||||| | |||||||||||||||| |||||||||||||    
T  3258 gttgtgttgtttatattattatgagatgaagattatgttgtgttgtttatattattatga 3317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 6593 - 6534
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||| ||||||||||||||||| | |||||||||||||||| |||||||||||||    
T  6593 gttgtgttgtttatattattatgagatgaagattatgttgtgttgtttatattattatga 6534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 155 - 214
Target Start/End: Original strand, 3294 - 3353
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||| ||||||||||||||||| | |||||||||||||||  |||||||||||||    
T  3294 gttgtgttgtttatattattatgagatgaagattatgttgtgttgcttatattattatga 3353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 155 - 214
Target Start/End: Original strand, 3366 - 3425
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||| ||||||| ||||||||| |||||||||||||||||| ||| |||||||||    
T  3366 gttgtgttgtttatattgttatgagatgatgattatgttgtgttgtttatgttattatga 3425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 6451 - 6392
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    |||||||||  |||||||||||||||| | |||||||||||||||| |||||||||||||    
T  6451 gttgtgttgtgtatattattatgagatgaagattatgttgtgttgtttatattattatga 6392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 160 - 214
Target Start/End: Original strand, 3227 - 3281
Alignment:
Q  160 gttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    |||| |||| |||||||||||| |||||||||||||||||| |||||||||||||    
T  3227 gttgtttatgttattatgagatgatgattatgttgtgttgtttatattattatga 3281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 155 - 212
Target Start/End: Complemental strand, 6557 - 6502
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattat 212  Q
    ||||||||| ||||||||||||||||| ||||||||||  |||||| |||||||||||    
T  6557 gttgtgttgtttatattattatgagatgatgattatgt--tgttgtttatattattat 6502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 210
Target Start/End: Complemental strand, 6379 - 6324
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattatt 210  Q
    |||||||||  |||||||||||||||| | |||||||||||||||| ||| |||||    
T  6379 gttgtgttgtgtatattattatgagatgaagattatgttgtgttgtttatgttatt 6324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 214
Target Start/End: Complemental strand, 6519 - 6464
Alignment:
Q  159 tgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||| |||||||||||| |||| |||| ||||||||||||  |||||||||||||    
T  6519 tgttgtttatattattataagatgatgaatatgttgtgttgcttatattattatga 6464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 197
Target Start/End: Original strand, 3402 - 3444
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgt 197  Q
    ||||||||| |||| |||||||||||| |||||||||||||||    
T  3402 gttgtgttgtttatgttattatgagatgatgattatgttgtgt 3444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 56; Significance: 2e-23; HSPs: 9)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 7651 - 7592
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  7651 gttgtgttgcttatattattatgagataatgattatgttgtgttgtgtatattattatga 7592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 7579 - 7520
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||| ||| |||||||||    
T  7579 gttgtgttgtttatattattatgagatgatgattatgttgtgttgtttatgttattatga 7520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 155 - 212
Target Start/End: Complemental strand, 2109 - 2052
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattat 212  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||  |||||||||||    
T  2109 gttgtgttgtttatattattatgagatgatgattatgttgtgttgcttatattattat 2052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 2073 - 2014
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    |||||||||||||||||||||| |||| || ||||||||||||||| ||| |||||||||    
T  2073 gttgtgttgcttatattattataagatgatcattatgttgtgttgtttatgttattatga 2014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 7615 - 7556
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    |||||||||  |||||||||||||||| || ||||||||||||||| |||||||||||||    
T  7615 gttgtgttgtgtatattattatgagatgatcattatgttgtgttgtttatattattatga 7556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 155 - 212
Target Start/End: Complemental strand, 7721 - 7666
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattat 212  Q
    ||||||||| ||||||||||||||||| ||||||||||  |||||| |||||||||||    
T  7721 gttgtgttgtttatattattatgagatgatgattatgt--tgttgtttatattattat 7666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 7742 - 7698
Alignment:
Q  170 ttattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||| |||| |||||||||||||||||| |||||||||||||    
T  7742 ttattataagatgatgattatgttgtgttgtttatattattatga 7698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 214
Target Start/End: Complemental strand, 7683 - 7628
Alignment:
Q  159 tgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||| |||||||||||| |||| |||| ||||||||||||  |||||||||||||    
T  7683 tgttgtttatattattataagatgatgaatatgttgtgttgcttatattattatga 7628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 212
Target Start/End: Complemental strand, 7823 - 7772
Alignment:
Q  159 tgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattat 212  Q
    ||||| ||||||||||||||||| ||||||||||  |||||| |||||||||||    
T  7823 tgttgtttatattattatgagatgatgattatgt--tgttgtttatattattat 7772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 2e-23; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 16978591 - 16978532
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  16978591 gttgtgttgcttatattattatgagatgatgattatgttgtgttgtgtatattattatga 16978532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 156 - 214
Target Start/End: Complemental strand, 43400693 - 43400635
Alignment:
Q  156 ttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  43400693 ttgtgttgcttatattattatgagatgatgattatgttgtgttgtgtatattattatga 43400635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 155 - 214
Target Start/End: Original strand, 14871524 - 14871583
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  14871524 gttgtgttgtttatattattatgagatgatgattatgttgtgttgtttatattattatga 14871583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 43400622 - 43400563
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  43400622 gttgtgttgtttatattattatgagatgatgattatgttgtgttgtttatattattatga 43400563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 16978769 - 16978710
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||||||||||||||||||||| | |||||||||||||||| ||||| |||||||    
T  16978769 gttgtgttgcttatattattatgagatgaagattatgttgtgttgtttatatcattatga 16978710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 155 - 214
Target Start/End: Original strand, 35962462 - 35962521
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||| ||| |||||||||    
T  35962462 gttgtgttgtttatattattatgagatgatgattatgttgtgttgtttatgttattatga 35962521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 16978697 - 16978638
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||| |||||||||| |||||| | |||||||||||||||| |||||||||||||    
T  16978697 gttgtgttgtttatattattttgagatgaagattatgttgtgttgtttatattattatga 16978638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 155 - 210
Target Start/End: Complemental strand, 16978733 - 16978678
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattatt 210  Q
    ||||||||| |||||| |||||||||| |||||||||||||||||| |||||||||    
T  16978733 gttgtgttgtttatatcattatgagatgatgattatgttgtgttgtttatattatt 16978678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 155 - 214
Target Start/End: Original strand, 35962498 - 35962557
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||| |||| |||||||||||| |||||||||||||||||| |||| ||||||||    
T  35962498 gttgtgttgtttatgttattatgagatgatgattatgttgtgttgtttatagtattatga 35962557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 43400658 - 43400599
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    |||||||||  |||||||||||||||| | |||||||||||||||| |||||||||||||    
T  43400658 gttgtgttgtgtatattattatgagatgaagattatgttgtgttgtttatattattatga 43400599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 155 - 209
Target Start/End: Complemental strand, 43400586 - 43400532
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattat 209  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||| ||| ||||    
T  43400586 gttgtgttgtttatattattatgagatgatgattatgttgtgttgtttatgttat 43400532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 11914788 - 11914833
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgt 200  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||    
T  11914788 gttgtgttgtttatattattatgagatgatgattatgttgtgttgt 11914833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 24513317 - 24513268
Alignment:
Q  165 ttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    |||||| |||||||||| |||||||||||||||||| |||||||||||||    
T  24513317 ttatatgattatgagatgatgattatgttgtgttgtttatattattatga 24513268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 35962437 - 35962485
Alignment:
Q  166 tatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    |||||||||||||||| | |||||||||||||||| |||||||||||||    
T  35962437 tatattattatgagatgaagattatgttgtgttgtttatattattatga 35962485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 6158153 - 6158094
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||| |||| |||||||||||  |||||||||||||||||| ||| |||||||||    
T  6158153 gttgtgttgtttatgttattatgagacgatgattatgttgtgttgtttatgttattatga 6158094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 214
Target Start/End: Original strand, 13026967 - 13027022
Alignment:
Q  159 tgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||| ||| |||||||| |||| |||||||||||||||||| |||||||||||||    
T  13026967 tgttgtttacattattataagatgatgattatgttgtgttgtctatattattatga 13027022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 16978555 - 16978496
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    |||||||||  |||||||||||||||| | |||||||||||||||| ||| |||||||||    
T  16978555 gttgtgttgtgtatattattatgagatgaagattatgttgtgttgtttatgttattatga 16978496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 214
Target Start/End: Complemental strand, 18899708 - 18899653
Alignment:
Q  159 tgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||| ||||||||||||||  | |||||||||||||||||| |||||||||||||    
T  18899708 tgttgtttatattattatgatgtgatgattatgttgtgttgtttatattattatga 18899653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 214
Target Start/End: Original strand, 34853175 - 34853230
Alignment:
Q  159 tgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||| ||| |||||||| |||| |||||||||||||||||| |||||||||||||    
T  34853175 tgttgtttacattattataagatgatgattatgttgtgttgtctatattattatga 34853230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 6158184 - 6158130
Alignment:
Q  160 gttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    |||| |||| |||||||||||| |||||||||||||||||| ||| |||||||||    
T  6158184 gttgtttatgttattatgagatgatgattatgttgtgttgtttatgttattatga 6158130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 155 - 197
Target Start/End: Original strand, 14871560 - 14871602
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgt 197  Q
    ||||||||| ||||||||||||||||| |||||||||||||||    
T  14871560 gttgtgttgtttatattattatgagatgatgattatgttgtgt 14871602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 155 - 197
Target Start/End: Complemental strand, 24513291 - 24513249
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgt 197  Q
    ||||||||| ||||||||||||||||| |||||||||||||||    
T  24513291 gttgtgttgtttatattattatgagatgatgattatgttgtgt 24513249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 11914762 - 11914811
Alignment:
Q  165 ttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    |||||| ||||||| || |||||||||||||||||| |||||||||||||    
T  11914762 ttatatgattatgaaatgatgattatgttgtgttgtttatattattatga 11914811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 169 - 214
Target Start/End: Original strand, 24180756 - 24180801
Alignment:
Q  169 attattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||||||| | |||||||||||||||| |||||||||||||    
T  24180756 attattatgagatgaagattatgttgtgttgtttatattattatga 24180801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 31414877 - 31414832
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgt 200  Q
    ||||||||| |||| |||||||||||| ||||||||||||||||||    
T  31414877 gttgtgttgtttatgttattatgagattatgattatgttgtgttgt 31414832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 23173600 - 23173556
Alignment:
Q  170 ttattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    |||||||||| | |||||||||||||||||| |||||||||||||    
T  23173600 ttattatgaggtgatgattatgttgtgttgtctatattattatga 23173556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 16613769 - 16613710
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||| |||| | ||||||||   |||||||||||||||||| |||||||||||||    
T  16613769 gttgtgttgtttatgtaattatgaggagatgattatgttgtgttgtttatattattatga 16613710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 214
Target Start/End: Original strand, 22045484 - 22045543
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||| |||| | ||||||||   |||||||||||||||||| |||||||||||||    
T  22045484 gttgtgttgtttatgtaattatgaggagatgattatgttgtgttgtttatattattatga 22045543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 194
Target Start/End: Original strand, 24180778 - 24180817
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttg 194  Q
    ||||||||| ||||||||||||||||| ||||||||||||    
T  24180778 gttgtgttgtttatattattatgagatgatgattatgttg 24180817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 197
Target Start/End: Original strand, 12204168 - 12204210
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgt 197  Q
    ||||||||| |||| |||||||||||| |||||||||||||||    
T  12204168 gttgtgttgtttatgttattatgagatgatgattatgttgtgt 12204210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 212
Target Start/End: Complemental strand, 16613520 - 16613466
Alignment:
Q  159 tgttgcttatattattatgagatcatgattatgttgtgttgtgtat-attattat 212  Q
    ||||| ||||||||||||||||| ||||||| |||||||||| ||| ||||||||    
T  16613520 tgttgtttatattattatgagatgatgattacgttgtgttgtatatgattattat 16613466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 193
Target Start/End: Complemental strand, 16978661 - 16978623
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgtt 193  Q
    ||||||||| ||||||||||||||||| |||||||||||    
T  16978661 gttgtgttgtttatattattatgagatgatgattatgtt 16978623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 212
Target Start/End: Original strand, 22045733 - 22045787
Alignment:
Q  159 tgttgcttatattattatgagatcatgattatgttgtgttgtgtat-attattat 212  Q
    ||||| ||||||||||||||||| ||||||| |||||||||| ||| ||||||||    
T  22045733 tgttgtttatattattatgagatgatgattacgttgtgttgtatatgattattat 22045787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 197
Target Start/End: Original strand, 35962534 - 35962576
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgt 197  Q
    ||||||||| ||||| ||||||||||| |||||||||||||||    
T  35962534 gttgtgttgtttatagtattatgagatgatgattatgttgtgt 35962576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 10834784 - 10834833
Alignment:
Q  165 ttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||||||||  | ||||||||||||||| || |||||||||||||    
T  10834784 ttatattattatgatgtgatgattatgttgtgtcgtttatattattatga 10834833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 155 - 196
Target Start/End: Complemental strand, 12269062 - 12269021
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtg 196  Q
    ||||||||| |||||||| |||||||| ||||||||||||||    
T  12269062 gttgtgttgtttatattaatatgagatgatgattatgttgtg 12269021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 16978617 - 16978568
Alignment:
Q  165 ttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    |||||||||||| |||| |||| ||||||||||||  |||||||||||||    
T  16978617 ttatattattataagatgatgaatatgttgtgttgcttatattattatga 16978568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 16978795 - 16978746
Alignment:
Q  165 ttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    |||||||||||| |||| |||| ||||||||||||  |||||||||||||    
T  16978795 ttatattattataagatgatgaatatgttgtgttgcttatattattatga 16978746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 54519832 - 54519783
Alignment:
Q  165 ttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||| ||||||  | |||||||||||||||||| |||||||||||||    
T  54519832 ttatattgttatgatgtgatgattatgttgtgttgtttatattattatga 54519783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 214
Target Start/End: Complemental strand, 16613554 - 16613501
Alignment:
Q  159 tgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    |||||||||| ||||||| |||| ||||||||||  |||||| |||||||||||||    
T  16613554 tgttgcttatgttattataagatgatgattatgt--tgttgtttatattattatga 16613501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 214
Target Start/End: Original strand, 22045699 - 22045752
Alignment:
Q  159 tgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    |||||||||| ||||||| |||| ||||||||||  |||||| |||||||||||||    
T  22045699 tgttgcttatgttattataagatgatgattatgt--tgttgtttatattattatga 22045752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 195
Target Start/End: Complemental strand, 22651576 - 22651540
Alignment:
Q  159 tgttgcttatattattatgagatcatgattatgttgt 195  Q
    ||||| ||||||||||||||||| |||||||||||||    
T  22651576 tgttgtttatattattatgagatgatgattatgttgt 22651540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 214
Target Start/End: Complemental strand, 22651610 - 22651557
Alignment:
Q  159 tgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||| |||||||||||| |||| ||||||||||  |||||| |||||||||||||    
T  22651610 tgttgtttatattattataagatgatgattatgt--tgttgtttatattattatga 22651557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 9e-23; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 156 - 214
Target Start/End: Original strand, 27768106 - 27768164
Alignment:
Q  156 ttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  27768106 ttgtgttgcttatattattatgagatgatgattatgttgtgttgtgtatattattatga 27768164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 17010402 - 17010343
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||||||||||||||||||||| || ||||||||||||||| |||||||||||||    
T  17010402 gttgtgttgcttatattattatgagatgataattatgttgtgttgtttatattattatga 17010343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 156 - 214
Target Start/End: Complemental strand, 17874805 - 17874747
Alignment:
Q  156 ttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    |||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  17874805 ttgtgttgtttatattattatgagatgatgattatgttgtgttgtttatattattatga 17874747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 17010366 - 17010307
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||| ||||||||||||||||| | |||||||||||||||| |||||||||||||    
T  17010366 gttgtgttgtttatattattatgagatgaagattatgttgtgttgtttatattattatga 17010307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 155 - 214
Target Start/End: Original strand, 27768177 - 27768236
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||| ||||||||||||||||| | |||||||||||||||| |||||||||||||    
T  27768177 gttgtgttgtttatattattatgagatgaagattatgttgtgttgtttatattattatga 27768236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 155 - 214
Target Start/End: Original strand, 27768213 - 27768272
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||| ||| |||||||||    
T  27768213 gttgtgttgtttatattattatgagatgatgattatgttgtgttgtttatgttattatga 27768272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 17874770 - 17874711
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||| ||||||||||||||||  |||||||||||||||||| ||| |||||||||    
T  17874770 gttgtgttgtttatattattatgagaagatgattatgttgtgttgtttatgttattatga 17874711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 155 - 214
Target Start/End: Original strand, 27768141 - 27768200
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    |||||||||  |||||||||||||||| | |||||||||||||||| |||||||||||||    
T  27768141 gttgtgttgtgtatattattatgagatgaagattatgttgtgttgtttatattattatga 27768200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 155 - 213
Target Start/End: Complemental strand, 17010330 - 17010272
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatg 213  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||  ||| ||||||||    
T  17010330 gttgtgttgtttatattattatgagatgatgattatgttgtgttggttatgttattatg 17010272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 155 - 209
Target Start/End: Complemental strand, 17874734 - 17874680
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattat 209  Q
    ||||||||| |||| |||||||||||| |||||||||||||||||||||| ||||    
T  17874734 gttgtgttgtttatgttattatgagatgatgattatgttgtgttgtgtatgttat 17874680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 31454677 - 31454623
Alignment:
Q  160 gttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    |||| |||| |||||||||||| |||||||||||||||||| |||||||||||||    
T  31454677 gttgtttatgttattatgagatgatgattatgttgtgttgtttatattattatga 31454623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 31454614 - 31454565
Alignment:
Q  165 ttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    |||| |||||||||||| |||||||||||||||||| |||||||||||||    
T  31454614 ttatgttattatgagatgatgattatgttgtgttgtttatattattatga 31454565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 155 - 212
Target Start/End: Complemental strand, 17010472 - 17010417
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattat 212  Q
    ||||||||| ||||||||||||||||| ||||||||||  |||||| |||||||||||    
T  17010472 gttgtgttgtttatattattatgagatgatgattatgt--tgttgtttatattattat 17010417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 23537999 - 23537955
Alignment:
Q  170 ttattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    |||||||||| | |||||||||||||||||| |||||||||||||    
T  23537999 ttattatgaggtgatgattatgttgtgttgtctatattattatga 23537955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 214
Target Start/End: Complemental strand, 17010434 - 17010379
Alignment:
Q  159 tgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||| |||||||||||| |||| |||| ||||||||||||  |||||||||||||    
T  17010434 tgttgtttatattattataagatgatgaatatgttgtgttgcttatattattatga 17010379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 22469465 - 22469406
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    |||||||||  ||| |||||||||| | |||||||||||||||||| ||||||| |||||    
T  22469465 gttgtgttgtctatgttattatgaggtgatgattatgttgtgttgtttatattactatga 22469406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 214
Target Start/End: Complemental strand, 22469497 - 22469442
Alignment:
Q  159 tgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||| ||||||||| ||||| | |||||||||||||||||| ||| |||||||||    
T  22469497 tgttgtttatattataatgaggtgatgattatgttgtgttgtctatgttattatga 22469442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 214
Target Start/End: Complemental strand, 29447532 - 29447477
Alignment:
Q  159 tgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||| |||| |||||||||||| |||||||||||||||||| ||| | |||||||    
T  29447532 tgttgtttatgttattatgagatgatgattatgttgtgttgtttatgtgattatga 29447477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 205
Target Start/End: Original strand, 27768249 - 27768299
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtata 205  Q
    ||||||||| |||| |||||||||||| ||||||||||||| |||| ||||    
T  27768249 gttgtgttgtttatgttattatgagatgatgattatgttgtattgtttata 27768299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 193
Target Start/End: Complemental strand, 31454588 - 31454550
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgtt 193  Q
    ||||||||| ||||||||||||||||| |||||||||||    
T  31454588 gttgtgttgtttatattattatgagatgatgattatgtt 31454550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 193
Target Start/End: Complemental strand, 31454646 - 31454608
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgtt 193  Q
    ||||||||| ||||||||||||||||| |||||||||||    
T  31454646 gttgtgttgtttatattattatgagatgatgattatgtt 31454608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 159 - 200
Target Start/End: Complemental strand, 262657 - 262616
Alignment:
Q  159 tgttgcttatattattatgagatcatgattatgttgtgttgt 200  Q
    ||||| |||| |||||||||||| ||||||||||||||||||    
T  262657 tgttgtttatgttattatgagatgatgattatgttgtgttgt 262616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 159 - 200
Target Start/End: Complemental strand, 6765339 - 6765298
Alignment:
Q  159 tgttgcttatattattatgagatcatgattatgttgtgttgt 200  Q
    ||||| |||| |||||||||||| ||||||||||||||||||    
T  6765339 tgttgtttatgttattatgagatgatgattatgttgtgttgt 6765298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 22358584 - 22358628
Alignment:
Q  170 ttattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    |||||||||||| ||||||||||||| |||| ||| |||||||||    
T  22358584 ttattatgagatgatgattatgttgtattgtctatgttattatga 22358628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 209
Target Start/End: Complemental strand, 31454556 - 31454512
Alignment:
Q  165 ttatattattatgagatcatgattatgttgtgttgtgtatattat 209  Q
    |||| |||||||||||| |||||||||||||||||| ||| ||||    
T  31454556 ttatgttattatgagatgatgattatgttgtgttgtttatgttat 31454512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 3e-22; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 155 - 212
Target Start/End: Original strand, 15884763 - 15884820
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattat 212  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  15884763 gttgtgttgcttatattattatgagatgatgattatgttgtgttgtgtatattattat 15884820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 15007795 - 15007736
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  15007795 gttgtgttgcttatattattatgagatgatgaatatgttgtgttgtgtatattattatga 15007736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 15007723 - 15007664
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  15007723 gttgtgttgtttatattattatgagataatgattatgttgtgttgtttatattattatga 15007664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 15007687 - 15007628
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||| ||| |||||||||    
T  15007687 gttgtgttgtttatattattatgagatgatgattatgttgtgttgtttatgttattatga 15007628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 155 - 214
Target Start/End: Original strand, 15884835 - 15884894
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||| ||| |||||||||    
T  15884835 gttgtgttgtttatattattatgagatgatgattatgttgtgttgtttatgttattatga 15884894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 15007759 - 15007700
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    |||||||||  |||||||||||||||| | |||||||||||||||| |||||||||||||    
T  15007759 gttgtgttgtgtatattattatgagatgaagattatgttgtgttgtttatattattatga 15007700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 159 - 214
Target Start/End: Complemental strand, 54604878 - 54604823
Alignment:
Q  159 tgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||| ||||||||||||||||| |||||||||||||||||| ||| |||||||||    
T  54604878 tgttgtttatattattatgagatgatgattatgttgtgttgtttatgttattatga 54604823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 214
Target Start/End: Complemental strand, 9637643 - 9637588
Alignment:
Q  159 tgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||| |||| |||||||||||| |||||||||||||||||| ||| |||||||||    
T  9637643 tgttgtttatgttattatgagatgatgattatgttgtgttgtttatgttattatga 9637588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 214
Target Start/End: Original strand, 15884799 - 15884858
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    |||||||||  ||||||||||| |||| | |||||||||||||||| |||||||||||||    
T  15884799 gttgtgttgtgtatattattatcagatgaagattatgttgtgttgtttatattattatga 15884858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 159 - 213
Target Start/End: Complemental strand, 15989439 - 15989385
Alignment:
Q  159 tgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatg 213  Q
    ||||| |||||| |||||||||| |||||||||||||||||| ||| ||||||||    
T  15989439 tgttgtttatatgattatgagatgatgattatgttgtgttgtctatgttattatg 15989385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 4828826 - 4828870
Alignment:
Q  170 ttattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    |||||||||| | |||||||||||||||||| |||||||||||||    
T  4828826 ttattatgaggtgatgattatgttgtgttgtctatattattatga 4828870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 4832121 - 4832165
Alignment:
Q  170 ttattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    |||||||||| | |||||||||||||||||| |||||||||||||    
T  4832121 ttattatgaggtgatgattatgttgtgttgtctatattattatga 4832165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 4835416 - 4835460
Alignment:
Q  170 ttattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    |||||||||| | |||||||||||||||||| |||||||||||||    
T  4835416 ttattatgaggtgatgattatgttgtgttgtctatattattatga 4835460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 214
Target Start/End: Complemental strand, 12841165 - 12841112
Alignment:
Q  159 tgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||| ||||||||||||||||| ||||||||||  |||||| |||||||||||||    
T  12841165 tgttgtttatattattatgagatgatgattatgt--tgttgtttatattattatga 12841112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 209
Target Start/End: Complemental strand, 40619363 - 40619319
Alignment:
Q  165 ttatattattatgagatcatgattatgttgtgttgtgtatattat 209  Q
    ||||||||||||||||| |||||||||||||||||| ||| ||||    
T  40619363 ttatattattatgagatgatgattatgttgtgttgtttatgttat 40619319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 214
Target Start/End: Original strand, 4859079 - 4859134
Alignment:
Q  159 tgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||| |||| ||||||||| || |||||||||||||||||| ||| |||||||||    
T  4859079 tgttgtttatgttattatgaaatgatgattatgttgtgttgtttatgttattatga 4859134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 214
Target Start/End: Complemental strand, 17142563 - 17142508
Alignment:
Q  159 tgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||| ||||||||||||||  | ||||||||||||| |||| |||||||||||||    
T  17142563 tgttgtttatattattatgatgtgatgattatgttgtcttgtttatattattatga 17142508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 196
Target Start/End: Complemental strand, 13844078 - 13844040
Alignment:
Q  158 gtgttgcttatattattatgagatcatgattatgttgtg 196  Q
    ||||||||||||||| |||||||| ||||||||||||||    
T  13844078 gtgttgcttatattaatatgagatgatgattatgttgtg 13844040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 189
Target Start/End: Original strand, 15481874 - 15481908
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgatta 189  Q
    ||||||||||||||||||||||||||| |||||||    
T  15481874 gttgtgttgcttatattattatgagatgatgatta 15481908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 197
Target Start/End: Complemental strand, 54604846 - 54604804
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgt 197  Q
    ||||||||| |||| |||||||||||| |||||||||||||||    
T  54604846 gttgtgttgtttatgttattatgagatgatgattatgttgtgt 54604804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 4859111 - 4859156
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgt 200  Q
    ||||||||| |||| |||||||||| | ||||||||||||||||||    
T  4859111 gttgtgttgtttatgttattatgaggtgatgattatgttgtgttgt 4859156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 15007821 - 15007772
Alignment:
Q  165 ttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    |||||||||||| |||| |||| ||||||||||||  |||||||||||||    
T  15007821 ttatattattataagatgatgaatatgttgtgttgcttatattattatga 15007772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 24048193 - 24048242
Alignment:
Q  165 ttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||||||||  | ||||||||||||||| || |||||||||||||    
T  24048193 ttatattattatgatgtgatgattatgttgtgtcgtttatattattatga 24048242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 195
Target Start/End: Complemental strand, 9922882 - 9922846
Alignment:
Q  159 tgttgcttatattattatgagatcatgattatgttgt 195  Q
    ||||| ||||||||||||||||| |||||||||||||    
T  9922882 tgttgtttatattattatgagatgatgattatgttgt 9922846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 195
Target Start/End: Original strand, 11480239 - 11480275
Alignment:
Q  159 tgttgcttatattattatgagatcatgattatgttgt 195  Q
    ||||| ||||||||||||||||| |||||||||||||    
T  11480239 tgttgtttatattattatgagatgatgattatgttgt 11480275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 195
Target Start/End: Complemental strand, 12841131 - 12841095
Alignment:
Q  159 tgttgcttatattattatgagatcatgattatgttgt 195  Q
    ||||| ||||||||||||||||| |||||||||||||    
T  12841131 tgttgtttatattattatgagataatgattatgttgt 12841095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 52; Significance: 5e-21; HSPs: 6)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 63491 - 63432
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  63491 gttgtgttgcttatattattatgagatgatgattatgttgtgatgtgtatattattatga 63432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 155 - 209
Target Start/End: Complemental strand, 63419 - 63365
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattat 209  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||    
T  63419 gttgtgttgtttatattattatgagatgatgattatgttgtgttgtttatattat 63365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 63623 - 63574
Alignment:
Q  165 ttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||||||||||| | |||||||||||||||| |||||||||||||    
T  63623 ttatattattatgagatgaagattatgttgtgttgtttatattattatga 63574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 63444 - 63396
Alignment:
Q  166 tatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    |||||||||||||||| | |||||||||||||||| |||||||||||||    
T  63444 tatattattatgagatgaagattatgttgtgttgtttatattattatga 63396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 212
Target Start/End: Complemental strand, 63597 - 63542
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattat 212  Q
    ||||||||| ||||||||||||||||| |||||||||   |||||| |||||||||||    
T  63597 gttgtgttgtttatattattatgagatgatgattatg--atgttgtttatattattat 63542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #6
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 159 - 212
Target Start/End: Complemental strand, 63559 - 63506
Alignment:
Q  159 tgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattat 212  Q
    ||||| |||||||||||| |||| |||| ||||||||||||| |||| ||||||    
T  63559 tgttgtttatattattataagatgatgaatatgttgtgttgtttataatattat 63506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 5e-21; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 155 - 214
Target Start/End: Original strand, 15174870 - 15174929
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  15174870 gttgtgttgcttatattattatgagatgatgattatcttgtgttgtgtatattattatga 15174929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 156 - 213
Target Start/End: Original strand, 20734731 - 20734788
Alignment:
Q  156 ttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatg 213  Q
    |||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  20734731 ttgtgttgtttatattattatgagatgatgattatgttgtgttgtttatattattatg 20734788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 155 - 214
Target Start/End: Original strand, 15174942 - 15175001
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||| ||| | |||||||    
T  15174942 gttgtgttgtttatattattatgagatgatgattatgttgtgttgtttatgtcattatga 15175001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 214
Target Start/End: Original strand, 15174907 - 15174965
Alignment:
Q  156 ttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||  |||||||||||||||| | |||||||||||||||| |||||||||||||    
T  15174907 ttgtgttgtgtatattattatgagatgaagattatgttgtgttgtttatattattatga 15174965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 214
Target Start/End: Original strand, 20734803 - 20734861
Alignment:
Q  156 ttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    |||||||| |||| |||||||||||| |||||||||||||||||| ||| |||||||||    
T  20734803 ttgtgttgtttatgttattatgagatgatgattatgttgtgttgtttatgttattatga 20734861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 17378377 - 17378426
Alignment:
Q  165 ttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||||||||||| |||||||||||||||||| ||| |||||||||    
T  17378377 ttatattattatgagatgatgattatgttgtgttgtttatgttattatga 17378426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 214
Target Start/End: Original strand, 29417418 - 29417477
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    |||||||||  ||| |||||||||| | |||||||||||||||||| |||||||||||||    
T  29417418 gttgtgttgactatgttattatgaggtgatgattatgttgtgttgtctatattattatga 29417477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 155 - 209
Target Start/End: Original strand, 20734838 - 20734892
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattat 209  Q
    ||||||||| |||| |||||||||||| |||||||||||||||||| ||| ||||    
T  20734838 gttgtgttgtttatgttattatgagatgatgattatgttgtgttgtttatgttat 20734892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 29849036 - 29849080
Alignment:
Q  170 ttattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    |||||||||| | |||||||||||||||||| |||||||||||||    
T  29849036 ttattatgaggtgatgattatgttgtgttgtctatattattatga 29849080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 214
Target Start/End: Original strand, 15174838 - 15174893
Alignment:
Q  159 tgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||| |||||||||||| |||| |||| ||||||||||||  |||||||||||||    
T  15174838 tgttgtttatattattataagatgatgaatatgttgtgttgcttatattattatga 15174893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 214
Target Start/End: Original strand, 20734766 - 20734825
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||| ||||||||||||| ||  |||||||| ||||||||| ||| |||||||||    
T  20734766 gttgtgttgtttatattattatgggacgatgattatattgtgttgtttatgttattatga 20734825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 214
Target Start/End: Complemental strand, 23351747 - 23351692
Alignment:
Q  159 tgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||| ||||||||||||||  | |||||||||||||||||| ||| |||||||||    
T  23351747 tgttgtttatattattatgatgtgatgattatgttgtgttgtctattttattatga 23351692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 209
Target Start/End: Original strand, 15174978 - 15175032
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattat 209  Q
    ||||||||| |||| | |||||||||| |||||||||||||||||| ||| ||||    
T  15174978 gttgtgttgtttatgtcattatgagatgatgattatgttgtgttgtttatgttat 15175032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 197
Target Start/End: Original strand, 17378403 - 17378445
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgt 197  Q
    ||||||||| |||| |||||||||||| |||||||||||||||    
T  17378403 gttgtgttgtttatgttattatgagatgatgattatgttgtgt 17378445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 214
Target Start/End: Original strand, 20734699 - 20734753
Alignment:
Q  160 gttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    |||| |||| ||||||||||||  ||||||| ||||||||| |||||||||||||    
T  20734699 gttgtttatgttattatgagatggtgattatattgtgttgtttatattattatga 20734753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 212
Target Start/End: Original strand, 25621556 - 25621607
Alignment:
Q  159 tgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattat 212  Q
    ||||| ||||||||||||||||| |||||||||  ||||||| |||||||||||    
T  25621556 tgttgtttatattattatgagatgatgattatg--gtgttgtttatattattat 25621607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 212
Target Start/End: Original strand, 15174810 - 15174855
Alignment:
Q  165 ttatattattatgagatcatgattatgttgtgttgtgtatattattat 212  Q
    ||||||||||||||||| ||||||||||  |||||| |||||||||||    
T  15174810 ttatattattatgagatgatgattatgt--tgttgtttatattattat 15174855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 195
Target Start/End: Complemental strand, 18927308 - 18927272
Alignment:
Q  159 tgttgcttatattattatgagatcatgattatgttgt 195  Q
    ||||| ||||||||||||||||| |||||||||||||    
T  18927308 tgttgtttatattattatgagatgatgattatgttgt 18927272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 196
Target Start/End: Original strand, 25957261 - 25957305
Alignment:
Q  152 taggttgtgttgcttatattattatgagatcatgattatgttgtg 196  Q
    ||||| ||||||||||||||||||| |||| ||||||||| ||||    
T  25957261 taggtggtgttgcttatattattataagatgatgattatgctgtg 25957305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 8e-20; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 157 - 214
Target Start/End: Complemental strand, 19879202 - 19879145
Alignment:
Q  157 tgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  19879202 tgtgttgcttatattattaggagatgatgattatgttgtgttgtgtatattattatga 19879145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 155 - 211
Target Start/End: Original strand, 41681959 - 41682015
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattatta 211  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||    
T  41681959 gttgtgttgtttatattattatgagatgatgattatgttgtgttgtttatattatta 41682015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 26453705 - 26453646
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||| ||| |||||||||    
T  26453705 gttgtgttgtttatattattatgagatgatgattatgttgtgttgtttatgttattatga 26453646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 155 - 214
Target Start/End: Original strand, 41681995 - 41682054
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||| ||||||||||| ||||| |||||||||||||||||| |||||||||||||    
T  41681995 gttgtgttgtttatattattacgagatgatgattatgttgtgttgtttatattattatga 41682054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 39833409 - 39833350
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||| ||||||||||||||||| ||||||| |||||||||| ||| |||||||||    
T  39833409 gttgtgttgtttatattattatgagatgatgattacgttgtgttgtttatgttattatga 39833350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 160 - 214
Target Start/End: Original strand, 41681928 - 41681982
Alignment:
Q  160 gttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    |||| |||| |||||||||||| |||||||||||||||||| |||||||||||||    
T  41681928 gttgtttatgttattatgagatgatgattatgttgtgttgtttatattattatga 41681982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 26453731 - 26453682
Alignment:
Q  165 ttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    |||||||||||| |||| |||||||||||||||||| |||||||||||||    
T  26453731 ttatattattataagatgatgattatgttgtgttgtttatattattatga 26453682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 39833435 - 39833386
Alignment:
Q  165 ttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||||||||||| | |||||||||||||||| |||||||||||||    
T  39833435 ttatattattatgagatgaagattatgttgtgttgtttatattattatga 39833386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 155 - 211
Target Start/End: Complemental strand, 19879168 - 19879112
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattatta 211  Q
    |||||||||  |||||||||||||||| | |||||||||||||||| ||||||||||    
T  19879168 gttgtgttgtgtatattattatgagatgaagattatgttgtgttgtttatattatta 19879112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 214
Target Start/End: Original strand, 16402343 - 16402398
Alignment:
Q  159 tgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||| ||||||||||||||||| ||||||||| |||||||| ||| |||||||||    
T  16402343 tgttgtttatattattatgagatgatgattatgctgtgttgtttatgttattatga 16402398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 19879132 - 19879073
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||| |||||||||||  |||| |||||||||||||||||| ||| |||||||||    
T  19879132 gttgtgttgtttatattattaccagatgatgattatgttgtgttgtttatgttattatga 19879073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 37515031 - 37514972
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||| |||| |||||||||||| |||||||| ||||||||| ||| |||||||||    
T  37515031 gttgtgttgtttatgttattatgagatgatgattatattgtgttgtttatgttattatga 37514972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 155 - 212
Target Start/End: Complemental strand, 19879271 - 19879216
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattat 212  Q
    ||||||||| ||||||||||||||||| ||||||||||  |||||| |||||||||||    
T  19879271 gttgtgttgtttatattattatgagatgatgattatgt--tgttgtttatattattat 19879216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 160 - 214
Target Start/End: Original strand, 21580485 - 21580539
Alignment:
Q  160 gttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    |||| |||| |||||||||||| |||||||||||||||||| ||| |||||||||    
T  21580485 gttgtttatgttattatgagatgatgattatgttgtgttgtttatgttattatga 21580539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 41682031 - 41682076
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgt 200  Q
    ||||||||| ||||||||||||||||| ||||||||||| ||||||    
T  41682031 gttgtgttgtttatattattatgagatgatgattatgttatgttgt 41682076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 20459356 - 20459312
Alignment:
Q  170 ttattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    |||||||||| | |||||||||||||||||| |||||||||||||    
T  20459356 ttattatgaggtgatgattatgttgtgttgtttatattattatga 20459312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 213
Target Start/End: Complemental strand, 20453744 - 20453705
Alignment:
Q  174 tatgagatcatgattatgttgtgttgtgtatattattatg 213  Q
    |||||||| |||||||||||||||||| ||||||||||||    
T  20453744 tatgagatgatgattatgttgtgttgtttatattattatg 20453705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 197
Target Start/End: Original strand, 21580516 - 21580558
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgt 197  Q
    ||||||||| |||| |||||||||||| |||||||||||||||    
T  21580516 gttgtgttgtttatgttattatgagatgatgattatgttgtgt 21580558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 197
Target Start/End: Complemental strand, 39833373 - 39833331
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgt 197  Q
    ||||||||| |||| |||||||||||| |||||||||||||||    
T  39833373 gttgtgttgtttatgttattatgagatgatgattatgttgtgt 39833331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 16402313 - 16402362
Alignment:
Q  165 ttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    |||||| ||||||| || ||||||||||| |||||| |||||||||||||    
T  16402313 ttatatgattatgaaatgatgattatgttatgttgtttatattattatga 16402362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 156 - 197
Target Start/End: Complemental strand, 37514994 - 37514953
Alignment:
Q  156 ttgtgttgcttatattattatgagatcatgattatgttgtgt 197  Q
    |||||||| |||| |||||||||||| |||||||||||||||    
T  37514994 ttgtgttgtttatgttattatgagatgatgattatgttgtgt 37514953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 197
Target Start/End: Original strand, 16402377 - 16402417
Alignment:
Q  157 tgtgttgcttatattattatgagatcatgattatgttgtgt 197  Q
    ||||||| |||| |||||||||||| |||||||||||||||    
T  16402377 tgtgttgtttatgttattatgagatgatgattatgttgtgt 16402417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 195
Target Start/End: Original strand, 17461751 - 17461787
Alignment:
Q  159 tgttgcttatattattatgagatcatgattatgttgt 195  Q
    ||||| ||||||||||||||||| |||||||||||||    
T  17461751 tgttgtttatattattatgagatgatgattatgttgt 17461787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 214
Target Start/End: Original strand, 21917862 - 21917915
Alignment:
Q  159 tgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||| |||||||||||| |||| ||||||||||  |||||| |||||||||||||    
T  21917862 tgttgtttatattattataagatgatgattatgt--tgttgtttatattattatga 21917915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 211
Target Start/End: Complemental strand, 23477881 - 23477829
Alignment:
Q  159 tgttgcttatattattatgagatcatgattatgttgtgttgtgtatattatta 211  Q
    ||||| |||||||||||| |||| |||| ||||||||||||  ||||||||||    
T  23477881 tgttgtttatattattataagatgatgaatatgttgtgttgcttatattatta 23477829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 212
Target Start/End: Original strand, 27473012 - 27473068
Alignment:
Q  157 tgtgttgcttatattattatgagatcatgattatgttgtgttgtgtat-attattat 212  Q
    ||||||| |||||| ||||| |||| |||||||||||||||||| ||| ||||||||    
T  27473012 tgtgttgtttatatcattataagatgatgattatgttgtgttgtatatgattattat 27473068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 37515052 - 37515008
Alignment:
Q  170 ttattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    |||| ||||||| |||||||||||||||||| ||| |||||||||    
T  37515052 ttatcatgagatgatgattatgttgtgttgtttatgttattatga 37515008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 48; Significance: 1e-18; HSPs: 5)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 15049 - 14990
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    |||||||| |||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  15049 gttgtgtttcttatattattatgagattatgattatgttgtgttgtttatattattatga 14990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 15013 - 14954
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||| ||||||||||||||||| || ||||||||||||||| |||||||||||||    
T  15013 gttgtgttgtttatattattatgagatgattattatgttgtgttgtttatattattatga 14954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 14977 - 14918
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||| ||||||||||||||||| ||||||||||||||| || ||| |||||||||    
T  14977 gttgtgttgtttatattattatgagatgatgattatgttgtgtggtttatgttattatga 14918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 15155 - 15096
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||| |||||||||| |||||| | |||||||||||||||| |||||||||||||    
T  15155 gttgtgttgtttatattattttgagatgaagattatgttgtgttgtttatattattatga 15096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156; HSP #5
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 155 - 212
Target Start/End: Complemental strand, 15119 - 15064
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattat 212  Q
    ||||||||| ||||||||||||||||| ||||||||||  |||||| |||||||||||    
T  15119 gttgtgttgtttatattattatgagatgatgattatgt--tgttgtttatattattat 15064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 1e-18; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 155 - 214
Target Start/End: Original strand, 21082453 - 21082512
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    |||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  21082453 gttgtgctgcttatattattatgagatgatgattatgttatgttgtgtatattattatga 21082512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 155 - 214
Target Start/End: Original strand, 21082525 - 21082584
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  21082525 gttgtgttgtttatattattatgagatgatgattatgttgtgttgtttatattattatga 21082584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 22500602 - 22500543
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||| |||| |||||||||||| |||||||||||||||||| |||||||||||||    
T  22500602 gttgtgttgtttatgttattatgagatgatgattatgttgtgttgtttatattattatga 22500543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 22508536 - 22508477
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||| |||| |||||||||||| |||||||||||||||||| |||||||||||||    
T  22508536 gttgtgttgtttatgttattatgagatgatgattatgttgtgttgtttatattattatga 22508477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 22500566 - 22500507
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||| ||||||||||||||||  |||||||||||||||||| ||| |||||||||    
T  22500566 gttgtgttgtttatattattatgagaagatgattatgttgtgttgtttatgttattatga 22500507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 22508500 - 22508441
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||| ||||||||||||||||  |||||||||||||||||| ||| |||||||||    
T  22508500 gttgtgttgtttatattattatgagaagatgattatgttgtgttgtttatgttattatga 22508441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 24883105 - 24883046
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||| ||||||||||||| ||| |||||||||||||||||| ||| |||||||||    
T  24883105 gttgtgttgtttatattattatgtgatgatgattatgttgtgttgtttatgttattatga 24883046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 155 - 209
Target Start/End: Original strand, 21082561 - 21082615
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattat 209  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||| ||| ||||    
T  21082561 gttgtgttgtttatattattatgagatgatgattatgttgtgttgtttatgttat 21082615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 155 - 209
Target Start/End: Complemental strand, 22500530 - 22500476
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattat 209  Q
    ||||||||| |||| |||||||||||| |||||||||||||||||||||| ||||    
T  22500530 gttgtgttgtttatgttattatgagatgatgattatgttgtgttgtgtatgttat 22500476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 214
Target Start/End: Original strand, 34492952 - 34493010
Alignment:
Q  156 ttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||  |||||||||||||||| | |||||||||||||||| |||||||||||||    
T  34492952 ttgtgttgtgtatattattatgagatgaagattatgttgtgttgtttatattattatga 34493010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 22500628 - 22500579
Alignment:
Q  165 ttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||||||||||| |||||||||||||||||| ||| |||||||||    
T  22500628 ttatattattatgagatgatgattatgttgtgttgtttatgttattatga 22500579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 22508562 - 22508513
Alignment:
Q  165 ttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||||||||||| |||||||||||||||||| ||| |||||||||    
T  22508562 ttatattattatgagatgatgattatgttgtgttgtttatgttattatga 22508513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 213
Target Start/End: Complemental strand, 24883136 - 24883083
Alignment:
Q  160 gttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatg 213  Q
    |||| |||| |||||||||||| |||||||||||||||||| ||||||||||||    
T  24883136 gttgtttatgttattatgagatgatgattatgttgtgttgtttatattattatg 24883083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 24917389 - 24917340
Alignment:
Q  165 ttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||||||||||| |||||||||||||||||| ||| |||||||||    
T  24917389 ttatattattatgagatgatgattatgttgtgttgtttatgttattatga 24917340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 155 - 211
Target Start/End: Complemental strand, 9974643 - 9974587
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattatta 211  Q
    ||||||||| ||||||||| ||||||  |||||||||||||||||| ||||||||||    
T  9974643 gttgtgttgtttatattatcatgagaagatgattatgttgtgttgtctatattatta 9974587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 21082500 - 21082548
Alignment:
Q  166 tatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    |||||||||||||||| | |||||||||||||||| |||||||||||||    
T  21082500 tatattattatgagatgaagattatgttgtgttgtttatattattatga 21082548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 22702693 - 22702634
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    |||||||||  ||| |||||||||| | |||||||||||||||||| |||||||||||||    
T  22702693 gttgtgttgactatgttattatgaggtgatgattatgttgtgttgtctatattattatga 22702634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 26895926 - 26895867
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    |||||||||  ||| |||||||||| | |||||||||||||||||| |||||||||||||    
T  26895926 gttgtgttgactatgttattatgaggtgatgattatgttgtgttgtctatattattatga 26895867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 9974674 - 9974620
Alignment:
Q  160 gttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    |||| ||||||||||||||||| | |||||||||||||||| |||||||| ||||    
T  9974674 gttgtttatattattatgagatgaagattatgttgtgttgtttatattatcatga 9974620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 155 - 209
Target Start/End: Complemental strand, 22508464 - 22508410
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattat 209  Q
    ||||||||| |||| |||||||||||| ||||||||||| |||||||||| ||||    
T  22508464 gttgtgttgtttatgttattatgagatgatgattatgttatgttgtgtatgttat 22508410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 155 - 209
Target Start/End: Complemental strand, 24883069 - 24883015
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattat 209  Q
    ||||||||| |||| |||||||||||| |||||||||||||||||| ||| ||||    
T  24883069 gttgtgttgtttatgttattatgagatgatgattatgttgtgttgtttatgttat 24883015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 159 - 214
Target Start/End: Original strand, 34492922 - 34492974
Alignment:
Q  159 tgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    |||||||||| ||||||||||||   |||||| |||||||||||||||||||||||    
T  34492922 tgttgcttatgttattatgagat---gattatattgtgttgtgtatattattatga 34492974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 197
Target Start/End: Complemental strand, 24917363 - 24917321
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgt 197  Q
    ||||||||| |||| |||||||||||| |||||||||||||||    
T  24917363 gttgtgttgtttatgttattatgagatgatgattatgttgtgt 24917321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 212
Target Start/End: Original strand, 27485757 - 27485811
Alignment:
Q  159 tgttgcttatattattatgagatcatgattatgttgtgttgtgtat-attattat 212  Q
    ||||| |||||||||||| |||| |||||||||||||||||| ||| ||||||||    
T  27485757 tgttgtttatattattattagatgatgattatgttgtgttgtatatgattattat 27485811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 214
Target Start/End: Original strand, 13102101 - 13102154
Alignment:
Q  159 tgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    |||||||||| ||||||| |||| ||||||||||  |||||| |||||||||||||    
T  13102101 tgttgcttatgttattataagattatgattatgt--tgttgtttatattattatga 13102154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 212
Target Start/End: Original strand, 21082394 - 21082439
Alignment:
Q  165 ttatattattatgagatcatgattatgttgtgttgtgtatattattat 212  Q
    ||||||||||||||||| ||||||||||  |||||| |||||||||||    
T  21082394 ttatattattatgagatgatgattatgt--tgttgtttatattattat 21082439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 195
Target Start/End: Complemental strand, 23285430 - 23285394
Alignment:
Q  159 tgttgcttatattattatgagatcatgattatgttgt 195  Q
    ||||| ||||||||||||||||| |||||||||||||    
T  23285430 tgttgtttatattattatgagatgatgattatgttgt 23285394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 1e-18; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 159 - 214
Target Start/End: Original strand, 29764728 - 29764783
Alignment:
Q  159 tgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  29764728 tgttgcttatattattatgagatgatgattatgttgtgttgtttatattattatga 29764783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 155 - 207
Target Start/End: Complemental strand, 51326360 - 51326308
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatatt 207  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  51326360 gttgtgttgcttatattattatgagatgatgattatgttgtgttgtttatatt 51326308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 155 - 214
Target Start/End: Original strand, 20971355 - 20971414
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||| ||| |||||||||    
T  20971355 gttgtgttgtttatattattatgagatgatgattatgttgtgttgtttatgttattatga 20971414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 155 - 214
Target Start/End: Original strand, 29764760 - 29764819
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||| ||||||||||||||||| |||||||||||||| ||| |||||||||||||    
T  29764760 gttgtgttgtttatattattatgagataatgattatgttgtggtgtttatattattatga 29764819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 207
Target Start/End: Original strand, 46198885 - 46198937
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatatt 207  Q
    ||||| ||||||||||||||||||||| |||||||||||||||||| ||||||    
T  46198885 gttgtattgcttatattattatgagatgatgattatgttgtgttgtttatatt 46198937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 155 - 197
Target Start/End: Complemental strand, 23072576 - 23072534
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgt 197  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  23072576 gttgtgttgcttatattattatgagatgatgattatgttgtgt 23072534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 20587416 - 20587357
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||| |||| ||||||||||||  ||||||||||||||||| ||| |||||||||    
T  20587416 gttgtgttgtttatgttattatgagatggtgattatgttgtgttgtttatgttattatga 20587357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 20591954 - 20591895
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||| |||| ||||||||||||  ||||||||||||||||| ||| |||||||||    
T  20591954 gttgtgttgtttatgttattatgagatggtgattatgttgtgttgtttatgttattatga 20591895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 214
Target Start/End: Original strand, 29764796 - 29764855
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    |||||| || ||||||||||||||||| | |||||||||||| ||| |||||||||||||    
T  29764796 gttgtggtgtttatattattatgagatgaagattatgttgtgctgtttatattattatga 29764855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 155 - 209
Target Start/End: Original strand, 29764832 - 29764886
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattat 209  Q
    |||||| || ||||||||||||||||| |||||||||||||||||| ||| ||||    
T  29764832 gttgtgctgtttatattattatgagatgatgattatgttgtgttgtttatgttat 29764886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 212
Target Start/End: Complemental strand, 19209109 - 19209052
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattat 212  Q
    |||||||||  ||| |||||||||| | |||||||||||||||||| |||||||||||    
T  19209109 gttgtgttgtctatgttattatgaggtgatgattatgttgtgttgtctatattattat 19209052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 51274895 - 51274940
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgt 200  Q
    ||||||||| |||| |||||||||||| ||||||||||||||||||    
T  51274895 gttgtgttgtttatgttattatgagatgatgattatgttgtgttgt 51274940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 214
Target Start/End: Complemental strand, 19209141 - 19209086
Alignment:
Q  159 tgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||| |||||| |||||||| | |||||||||||||||||| ||| |||||||||    
T  19209141 tgttgtttatatgattatgaggtgatgattatgttgtgttgtctatgttattatga 19209086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 214
Target Start/End: Complemental strand, 20587448 - 20587393
Alignment:
Q  159 tgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||| |||| ||||||||||||  ||||||||||||||||| ||| |||||||||    
T  20587448 tgttgtttatgttattatgagatggtgattatgttgtgttgtttatgttattatga 20587393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 214
Target Start/End: Complemental strand, 20591986 - 20591931
Alignment:
Q  159 tgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||| |||| ||||||||||||  ||||||||||||||||| ||| |||||||||    
T  20591986 tgttgtttatgttattatgagatggtgattatgttgtgttgtttatgttattatga 20591931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 193
Target Start/End: Complemental strand, 43690364 - 43690329
Alignment:
Q  158 gtgttgcttatattattatgagatcatgattatgtt 193  Q
    |||||||||||||||||||||||| |||||||||||    
T  43690364 gtgttgcttatattattatgagatgatgattatgtt 43690329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 212
Target Start/End: Original strand, 13883202 - 13883253
Alignment:
Q  159 tgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattat 212  Q
    ||||| ||||||||||||||||| ||||||||||  |||||| |||||||||||    
T  13883202 tgttgtttatattattatgagataatgattatgt--tgttgtttatattattat 13883253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 212
Target Start/End: Original strand, 13883304 - 13883358
Alignment:
Q  159 tgttgcttatattattatgagatcatgattatgttgtgttgtgtat-attattat 212  Q
    ||||| |||| |||||||||||| |||||||||||||||||| ||| ||||||||    
T  13883304 tgttgtttatgttattatgagatgatgattatgttgtgttgtatatgattattat 13883358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 196
Target Start/End: Complemental strand, 20636380 - 20636342
Alignment:
Q  158 gtgttgcttatattattatgagatcatgattatgttgtg 196  Q
    |||||||||||||||||||||||| |||||| |||||||    
T  20636380 gtgttgcttatattattatgagatgatgattgtgttgtg 20636342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 197
Target Start/End: Original strand, 20971391 - 20971433
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgt 197  Q
    ||||||||| |||| |||||||||||| |||||||||||||||    
T  20971391 gttgtgttgtttatgttattatgagatgatgattatgttgtgt 20971433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 197
Target Start/End: Original strand, 46198956 - 46198998
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgt 197  Q
    ||||||||| |||| |||||||||||| |||||||||||||||    
T  46198956 gttgtgttgtttatgttattatgagatgatgattatgttgtgt 46198998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 20587380 - 20587335
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgt 200  Q
    ||||||||| |||| |||||||||| | ||||||||||||||||||    
T  20587380 gttgtgttgtttatgttattatgaggtgatgattatgttgtgttgt 20587335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 20591918 - 20591873
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgt 200  Q
    ||||||||| |||| |||||||||| | ||||||||||||||||||    
T  20591918 gttgtgttgtttatgttattatgaggtgatgattatgttgtgttgt 20591873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1458 (Bit Score: 44; Significance: 3e-16; HSPs: 2)
Name: scaffold1458
Description:

Target: scaffold1458; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 1697 - 1638
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||| ||| |||||||||    
T  1697 gttgtgttgtttatattattatgagatgatgattatgttgtgttgtttatgttattatga 1638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1458; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 197
Target Start/End: Complemental strand, 1661 - 1619
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgt 197  Q
    ||||||||| |||| |||||||||||| |||||||||||||||    
T  1661 gttgtgttgtttatgttattatgagatgatgattatgttgtgt 1619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 44; Significance: 3e-16; HSPs: 2)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 3865 - 3806
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||| ||| |||||||||    
T  3865 gttgtgttgtttatattattatgagatgatgattatgttgtgttgtttatgttattatga 3806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 197
Target Start/End: Complemental strand, 3829 - 3787
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgt 197  Q
    ||||||||| |||| |||||||||||| |||||||||||||||    
T  3829 gttgtgttgtttatgttattatgagatgatgattatgttgtgt 3787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 44; Significance: 3e-16; HSPs: 5)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 3865 - 3806
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||| ||| |||||||||    
T  3865 gttgtgttgtttatattattatgagatgatgattatgttgtgttgtttatgttattatga 3806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 155 - 214
Target Start/End: Original strand, 9283 - 9342
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||| ||| |||||||||    
T  9283 gttgtgttgtttatattattatgagatgatgattatgttgtgttgtttatgttattatga 9342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 9257 - 9306
Alignment:
Q  165 ttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    |||||| |||||||||| |||||||||||||||||| |||||||||||||    
T  9257 ttatatgattatgagatgatgattatgttgtgttgtttatattattatga 9306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 197
Target Start/End: Complemental strand, 3829 - 3787
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgt 197  Q
    ||||||||| |||| |||||||||||| |||||||||||||||    
T  3829 gttgtgttgtttatgttattatgagatgatgattatgttgtgt 3787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 197
Target Start/End: Original strand, 9319 - 9361
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgt 197  Q
    ||||||||| |||| |||||||||||| |||||||||||||||    
T  9319 gttgtgttgtttatgttattatgagatgatgattatgttgtgt 9361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 44; Significance: 3e-16; HSPs: 3)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 155 - 214
Target Start/End: Original strand, 26116 - 26175
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||| ||| |||||||||    
T  26116 gttgtgttgtttatattattatgagatgatgattatgttgtgttgtttatgttattatga 26175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 159 - 214
Target Start/End: Original strand, 26084 - 26139
Alignment:
Q  159 tgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||| |||| |||||||||||| |||||||||||||||||| |||||||||||||    
T  26084 tgttgtttatgttattatgagatgatgattatgttgtgttgtttatattattatga 26139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 214
Target Start/End: Original strand, 26152 - 26211
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||| |||| |||||||||||| |||||||||||||||| | ||| |||||||||    
T  26152 gttgtgttgtttatgttattatgagatgatgattatgttgtgttatttatgttattatga 26211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 157 - 214
Target Start/End: Original strand, 16551377 - 16551434
Alignment:
Q  157 tgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||| ||||||||||||||||| |||||||||||||||||| ||| |||||||||    
T  16551377 tgtgttgtttatattattatgagatgatgattatgttgtgttgtttatgttattatga 16551434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 157 - 214
Target Start/End: Complemental strand, 16614285 - 16614228
Alignment:
Q  157 tgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||| ||||||||||||||||| |||||||||||||||||| ||| |||||||||    
T  16614285 tgtgttgtttatattattatgagatgatgattatgttgtgttgtttatgttattatga 16614228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 155 - 214
Target Start/End: Original strand, 32161342 - 32161400
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||| ||||||||||||||||| |||||| ||||||||||| |||||||||||||    
T  32161342 gttgtgttgtttatattattatgagatgatgatt-tgttgtgttgtttatattattatga 32161400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 155 - 214
Target Start/End: Original strand, 32161377 - 32161436
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||| ||||||||||||||||| |||||||||| ||||||| ||| |||||||||    
T  32161377 gttgtgttgtttatattattatgagatgatgattatgtagtgttgtttatgttattatga 32161436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 8939671 - 8939622
Alignment:
Q  165 ttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    |||||| |||||||||| |||||||||||||||||| |||||||||||||    
T  8939671 ttatatgattatgagatgatgattatgttgtgttgtttatattattatga 8939622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 32161451 - 32161500
Alignment:
Q  165 ttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||||||||||| |||||||||| ||||||| |||||||||||||    
T  32161451 ttatattattatgagatgatgattatgtagtgttgtttatattattatga 32161500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 214
Target Start/End: Original strand, 1490770 - 1490829
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||| |||| |||||||||| | ||||||||||| |||||| |||||||||||||    
T  1490770 gttgtgttgtttatgttattatgaggtgatgattatgttatgttgtttatattattatga 1490829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 16458671 - 16458612
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||| |||| |||||| ||||| |||||||||||||||||| ||| |||||||||    
T  16458671 gttgtgttgtttatgttattacgagatgatgattatgttgtgttgtttatgttattatga 16458612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 214
Target Start/End: Original strand, 16551343 - 16551398
Alignment:
Q  159 tgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||| ||||||||||||||||| | ||||||| |||||||| |||||||||||||    
T  16551343 tgttgtttatattattatgagatgaagattatgctgtgttgtttatattattatga 16551398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 214
Target Start/End: Complemental strand, 16614319 - 16614264
Alignment:
Q  159 tgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||| ||||||||||||||||| | ||||||| |||||||| |||||||||||||    
T  16614319 tgttgtttatattattatgagatgaagattatgctgtgttgtttatattattatga 16614264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 32161480 - 32161531
Alignment:
Q  158 gtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattat 209  Q
    |||||| ||||||||||||||||| |||||||||||||||||| ||| ||||    
T  32161480 gtgttgtttatattattatgagatgatgattatgttgtgttgtttatgttat 32161531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 211
Target Start/End: Complemental strand, 48811586 - 48811535
Alignment:
Q  160 gttgcttatattattatgagatcatgattatgttgtgttgtgtatattatta 211  Q
    |||| |||| |||||||||||| |||||||||||||||||| ||||||||||    
T  48811586 gttgtttatgttattatgagatgatgattatgttgtgttgtttatattatta 48811535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 155 - 197
Target Start/End: Complemental strand, 8939645 - 8939603
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgt 197  Q
    ||||||||| ||||||||||||||||| |||||||||||||||    
T  8939645 gttgtgttgtttatattattatgagatgatgattatgttgtgt 8939603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 212
Target Start/End: Original strand, 14933384 - 14933425
Alignment:
Q  171 tattatgagatcatgattatgttgtgttgtgtatattattat 212  Q
    ||||||||||| |||||||||||||||||| |||||||||||    
T  14933384 tattatgagatgatgattatgttgtgttgtttatattattat 14933425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 212
Target Start/End: Original strand, 15356819 - 15356860
Alignment:
Q  171 tattatgagatcatgattatgttgtgttgtgtatattattat 212  Q
    ||||||||||| |||||||||||||||||| |||||||||||    
T  15356819 tattatgagatgatgattatgttgtgttgtttatattattat 15356860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 212
Target Start/End: Original strand, 15360977 - 15361018
Alignment:
Q  171 tattatgagatcatgattatgttgtgttgtgtatattattat 212  Q
    ||||||||||| |||||||||||||||||| |||||||||||    
T  15360977 tattatgagatgatgattatgttgtgttgtttatattattat 15361018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 837909 - 837953
Alignment:
Q  170 ttattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    |||||||||| | |||||||||||||||||| |||||||||||||    
T  837909 ttattatgaggtgatgattatgttgtgttgtctatattattatga 837953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 1203089 - 1203133
Alignment:
Q  170 ttattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    |||||||||| | |||||||||||||||||| |||||||||||||    
T  1203089 ttattatgaggtgatgattatgttgtgttgtctatattattatga 1203133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 214
Target Start/End: Complemental strand, 15719564 - 15719511
Alignment:
Q  159 tgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    |||||||||||||||||| |||| ||||||||||  |||||| |||||||||||||    
T  15719564 tgttgcttatattattataagatgatgattatgt--tgttgtttatattattatga 15719511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 16109856 - 16109900
Alignment:
Q  170 ttattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    |||||||||| | |||||||||||||||||| |||||||||||||    
T  16109856 ttattatgaggtgatgattatgttgtgttgtctatattattatga 16109900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 199
Target Start/End: Original strand, 30822186 - 30822230
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttg 199  Q
    ||||||||| |||| |||||||||||| |||||||||||||||||    
T  30822186 gttgtgttgtttatgttattatgagatgatgattatgttgtgttg 30822230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 37728382 - 37728426
Alignment:
Q  170 ttattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    |||||||||| | |||||||||||||||||| |||||||||||||    
T  37728382 ttattatgaggtgatgattatgttgtgttgtttatattattatga 37728426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 214
Target Start/End: Original strand, 6373417 - 6373476
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||| |||| | ||||||||   |||||||||||||||||| |||||||||||||    
T  6373417 gttgtgttgtttatgtgattatgaggagatgattatgttgtgttgtttatattattatga 6373476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 214
Target Start/End: Complemental strand, 11660558 - 11660503
Alignment:
Q  159 tgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||| ||||||||||||||  | ||||||||||||||| || |||||||||||||    
T  11660558 tgttgtttatattattatgatgtgatgattatgttgtgtcgtttatattattatga 11660503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 13255004 - 13254945
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    |||||||||  ||| |||||||||| | |||||||||| ||||||| |||||||||||||    
T  13255004 gttgtgttgtctatgttattatgaggtgatgattatgtggtgttgtttatattattatga 13254945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 13255040 - 13254981
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    |||||||||  ||| |||||||||| | |||||||||||||||||| ||| |||||||||    
T  13255040 gttgtgttgtctatgttattatgaggtgatgattatgttgtgttgtctatgttattatga 13254981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 214
Target Start/End: Complemental strand, 13255072 - 13255017
Alignment:
Q  159 tgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||| |||||| ||||| |||| |||||||||||||||||| ||| |||||||||    
T  13255072 tgttgtttatatgattataagatgatgattatgttgtgttgtctatgttattatga 13255017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 214
Target Start/End: Original strand, 30822150 - 30822209
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||| |||| || |||| |||| |||||||||||||||||| ||| |||||||||    
T  30822150 gttgtgttgattatgttgttataagatgatgattatgttgtgttgtttatgttattatga 30822209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 16551315 - 16551362
Alignment:
Q  165 ttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||||||||||| ||||||||||  |||||| |||||||||||||    
T  16551315 ttatattattatgagatgatgattatgt--tgttgtttatattattatga 16551362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 197
Target Start/End: Original strand, 16551411 - 16551453
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgt 197  Q
    ||||||||| |||| |||||||||||| |||||||||||||||    
T  16551411 gttgtgttgtttatgttattatgagatgatgattatgttgtgt 16551453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 197
Target Start/End: Complemental strand, 16614251 - 16614209
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgt 197  Q
    ||||||||| |||| |||||||||||| |||||||||||||||    
T  16614251 gttgtgttgtttatgttattatgagatgatgattatgttgtgt 16614209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 16614347 - 16614300
Alignment:
Q  165 ttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||||||||||| ||||||||||  |||||| |||||||||||||    
T  16614347 ttatattattatgagatgatgattatgt--tgttgtttatattattatga 16614300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 213
Target Start/End: Complemental strand, 48811555 - 48811497
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatg 213  Q
    ||||||||| |||||||||||  |||| ||||||||||||  |||| ||||||||||||    
T  48811555 gttgtgttgtttatattattactagatgatgattatgttgcattgtttatattattatg 48811497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 195
Target Start/End: Original strand, 6373562 - 6373602
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgt 195  Q
    |||| |||| ||||||||||||||||| |||||||||||||    
T  6373562 gttgagttgtttatattattatgagatgatgattatgttgt 6373602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 195
Target Start/End: Complemental strand, 15719530 - 15719494
Alignment:
Q  159 tgttgcttatattattatgagatcatgattatgttgt 195  Q
    ||||| ||||||||||||||||| |||||||||||||    
T  15719530 tgttgtttatattattatgagatgatgattatgttgt 15719494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 199
Target Start/End: Complemental strand, 16458635 - 16458591
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttg 199  Q
    ||||||||| |||| |||||||||| | |||||||||||||||||    
T  16458635 gttgtgttgtttatgttattatgaggtgatgattatgttgtgttg 16458591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 211
Target Start/End: Complemental strand, 16458703 - 16458651
Alignment:
Q  159 tgttgcttatattattatgagatcatgattatgttgtgttgtgtatattatta 211  Q
    ||||| |||| ||||||||| || |||||||||||||||||| ||| ||||||    
T  16458703 tgttgtttatgttattatgaaatgatgattatgttgtgttgtttatgttatta 16458651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 195
Target Start/End: Complemental strand, 16998113 - 16998077
Alignment:
Q  159 tgttgcttatattattatgagatcatgattatgttgt 195  Q
    |||||||||||||||||| |||| |||||||||||||    
T  16998113 tgttgcttatattattataagatgatgattatgttgt 16998077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 199
Target Start/End: Original strand, 30822118 - 30822158
Alignment:
Q  159 tgttgcttatattattatgagatcatgattatgttgtgttg 199  Q
    ||||| |||| |||||||||||| |||||||||||||||||    
T  30822118 tgttgtttatgttattatgagatgatgattatgttgtgttg 30822158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 34956832 - 34956788
Alignment:
Q  170 ttattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    |||||||||| | |||||||||||||||| | |||||||||||||    
T  34956832 ttattatgaggtgatgattatgttgtgttttctatattattatga 34956788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 209
Target Start/End: Complemental strand, 48811509 - 48811465
Alignment:
Q  165 ttatattattatgagatcatgattatgttgtgttgtgtatattat 209  Q
    ||||||||||||| ||| |||||||||||||||||| ||| ||||    
T  48811509 ttatattattatgggatgatgattatgttgtgttgtttatgttat 48811465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 207
Target Start/End: Original strand, 71039 - 71091
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatatt 207  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||| ||||||    
T  71039 gttgtgttgcttatattattatgagatgatgactatgttgtgttgtttatatt 71091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 197
Target Start/End: Original strand, 71110 - 71152
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgt 197  Q
    ||||||||| |||| |||||||||||| |||||||||||||||    
T  71110 gttgtgttgtttatgttattatgagatgatgattatgttgtgt 71152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 4)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 155 - 214
Target Start/End: Original strand, 11627 - 11686
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||| |||| |||||||||||| |||||||||||||||||| ||| |||||||||    
T  11627 gttgtgttgtttatgttattatgagatgatgattatgttgtgttgtttatgttattatga 11686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 214
Target Start/End: Original strand, 11595 - 11650
Alignment:
Q  159 tgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||| |||| |||||||||||| |||||||||||||||||| ||| |||||||||    
T  11595 tgttgtttatgttattatgagatgatgattatgttgtgttgtttatgttattatga 11650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 214
Target Start/End: Original strand, 11663 - 11722
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||| |||| |||||||||||| ||| |||||||||||||| ||| |||||||||    
T  11663 gttgtgttgtttatgttattatgagatgatgtttatgttgtgttgtttatgttattatga 11722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371; HSP #4
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 11699 - 11744
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgt 200  Q
    ||||||||| |||| |||||||||||| ||| ||||||||||||||    
T  11699 gttgtgttgtttatgttattatgagatgatgtttatgttgtgttgt 11744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 6539 - 6584
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgt 200  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||    
T  6539 gttgtgttgtttatattattatgagatgatgattatgttgtgttgt 6584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 6513 - 6562
Alignment:
Q  165 ttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    |||||| ||||||| || |||||||||||||||||| |||||||||||||    
T  6513 ttatatgattatgaaatgatgattatgttgtgttgtttatattattatga 6562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 157 - 214
Target Start/End: Complemental strand, 1550 - 1493
Alignment:
Q  157 tgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||| ||||||||||||||  | |||||||||||||||||| |||||||||||||    
T  1550 tgtgttgtttatattattatgatgtgatgattatgttgtgttgtttatattattatga 1493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 1916 - 1857
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    |||||||||  ||| |||||||||| | |||||||||||||||||| |||||||||||||    
T  1916 gttgtgttgtctatgttattatgaggtgatgattatgttgtgttgtctatattattatga 1857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 214
Target Start/End: Complemental strand, 1948 - 1893
Alignment:
Q  159 tgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||| |||||| |||||||||| |||||||||||||||||| ||| |||||||||    
T  1948 tgttgtttatatgattatgagatgatgattatgttgtgttgtctatgttattatga 1893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 214
Target Start/End: Original strand, 4669 - 4728
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    |||||||||  ||| |||||||||| | |||||||||||||||||| |||||||||||||    
T  4669 gttgtgttgtctatgttattatgaggtgatgattatgttgtgttgtttatattattatga 4728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 4601 - 4655
Alignment:
Q  159 tgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatg 213  Q
    ||||| |||||| |||||||||| |||||||||||||||||| ||| ||||||||    
T  4601 tgttgtttatatgattatgagatgatgattatgttgtgttgtctatgttattatg 4655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 36; Significance: 0.00000000002; HSPs: 5)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 96 - 37
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    |||||||||  ||| |||||||||| | |||||||||||||||||| |||||||||||||    
T  96 gttgtgttgtctatgttattatgaggtgatgattatgttgtgttgtttatattattatga 37  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 214
Target Start/End: Complemental strand, 164 - 109
Alignment:
Q  159 tgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||| |||||| |||||||||| |||||||||||||||||| ||| |||||||||    
T  164 tgttgtttatatgattatgagatgatgattatgttgtgttgtctatgttattatga 109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 9175 - 9116
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    |||||||||  ||| |||||||||| | |||||||||||||||||| |||||||||||||    
T  9175 gttgtgttgtctatgttattatgaggtgatgattatgttgtgttgtttatattattatga 9116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 211
Target Start/End: Complemental strand, 9243 - 9191
Alignment:
Q  159 tgttgcttatattattatgagatcatgattatgttgtgttgtgtatattatta 211  Q
    ||||| |||||| |||||||||| |||||||||||||||||| ||| ||||||    
T  9243 tgttgtttatatgattatgagatgatgattatgttgtgttgtctatgttatta 9191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 132 - 73
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    |||||||||  ||| |||||||||| | |||||||||||||||||| ||| |||||||||    
T  132 gttgtgttgtctatgttattatgaggtgatgattatgttgtgttgtctatgttattatga 73  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 214
Target Start/End: Original strand, 3465 - 3512
Alignment:
Q  167 atattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    |||||||||| |||| |||||||||||||||||| |||||||||||||    
T  3465 atattattataagatgatgattatgttgtgttgtctatattattatga 3512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 169 - 214
Target Start/End: Original strand, 937 - 982
Alignment:
Q  169 attattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    |||||||| |||| |||||||||||||||||| |||||||||||||    
T  937 attattataagatgatgattatgttgtgttgtctatattattatga 982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 212
Target Start/End: Complemental strand, 145602 - 145555
Alignment:
Q  165 ttatattattatgagatcatgattatgttgtgttgtgtatattattat 212  Q
    ||||||||||||||||| |||||||||||||||||| ||| |||||||    
T  145602 ttatattattatgagatgatgattatgttgtgttgtttatgttattat 145555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 169 - 214
Target Start/End: Original strand, 41616 - 41661
Alignment:
Q  169 attattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    |||||||| |||| |||||||||||||||||| |||||||||||||    
T  41616 attattataagatgatgattatgttgtgttgtctatattattatga 41661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 47874 - 47830
Alignment:
Q  170 ttattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    |||||||||| | |||||||||||||||||| |||||||||||||    
T  47874 ttattatgaggtgatgattatgttgtgttgtctatattattatga 47830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1508 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1508
Description:

Target: scaffold1508; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 209
Target Start/End: Original strand, 285 - 328
Alignment:
Q  166 tatattattatgagatcatgattatgttgtgttgtgtatattat 209  Q
    |||||||||||||||| | |||||||||||||||||||| ||||    
T  285 tatattattatgagatgaagattatgttgtgttgtgtatgttat 328  T

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Target: scaffold0216 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 20925 - 20866
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    |||||||||  ||| |||||||||| | ||||||||||||||| || |||||||||||||    
T  20925 gttgtgttgtctatgttattatgaggtgatgattatgttgtgtcgtttatattattatga 20866  T

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Target: scaffold0216; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 20951 - 20902
Alignment:
Q  165 ttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||||||||||||  | |||||||||||||||||| ||| |||||||||    
T  20951 ttatattattatgatgtgatgattatgttgtgttgtctatgttattatga 20902  T

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Target: scaffold0021 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 145735 - 145676
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    |||||||||  ||| |||||||||| | ||| |||||||||||||| |||||||||||||    
T  145735 gttgtgttgactatgttattatgaggtgatgtttatgttgtgttgtctatattattatga 145676  T

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Target: scaffold0436 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0436
Description:

Target: scaffold0436; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 197
Target Start/End: Complemental strand, 7597 - 7555
Alignment:
Q  155 gttgtgttgcttatattattatgagatcatgattatgttgtgt 197  Q
    ||||||||| |||| |||||||||||| |||||||||||||||    
T  7597 gttgtgttgtttatgttattatgagatgatgattatgttgtgt 7555  T

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Target: scaffold0810 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0810
Description:

Target: scaffold0810; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 159 - 196
Target Start/End: Complemental strand, 2548 - 2511
Alignment:
Q  159 tgttgcttatattattatgagatcatgattatgttgtg 196  Q
    |||||||||||| |||||||||| ||||||||||||||    
T  2548 tgttgcttatataattatgagataatgattatgttgtg 2511  T

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Target: scaffold0780 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0780
Description:

Target: scaffold0780; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 156 - 197
Target Start/End: Original strand, 4136 - 4177
Alignment:
Q  156 ttgtgttgcttatattattatgagatcatgattatgttgtgt 197  Q
    |||||||| |||| |||||||||||| |||||||||||||||    
T  4136 ttgtgttgtttatgttattatgagatgatgattatgttgtgt 4177  T

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Target: scaffold0076 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 214
Target Start/End: Original strand, 26886 - 26939
Alignment:
Q  159 tgttgcttatattattatgagatcatgattatgttgtgttgtgtatattattatga 214  Q
    ||||| |||||||||||| |||| ||||||||||  |||||| |||||||||||||    
T  26886 tgttgtttatattattataagatgatgattatgt--tgttgtttatattattatga 26939  T

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Target: scaffold0076; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 195
Target Start/End: Original strand, 26920 - 26956
Alignment:
Q  159 tgttgcttatattattatgagatcatgattatgttgt 195  Q
    ||||| ||||||||||||||||| |||||||||||||    
T  26920 tgttgtttatattattatgagatgatgattatgttgt 26956  T

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Target: scaffold0058 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 1149 - 1201
Alignment:
Q  160 gttgcttatattattatgagatcatgattatgttgtgttgtgtatattattat 212  Q
    |||| |||| |||||||||| | | |||||||||||||||| |||||||||||    
T  1149 gttgtttatgttattatgaggtgaggattatgttgtgttgtttatattattat 1201  T

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