View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1687-Insertion-1 (Length: 456)

Name: NF1687-Insertion-1
Description: NF1687
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1687-Insertion-1
NF1687-Insertion-1
[»] chr3 (22 HSPs)
chr3 (8-161)||(12365214-12365367)
chr3 (289-385)||(12365115-12365212)
chr3 (171-274)||(32221472-32221575)
chr3 (158-288)||(46829040-46829163)
chr3 (175-273)||(46829055-46829146)
chr3 (167-273)||(31280161-31280267)
chr3 (161-281)||(32221468-32221588)
chr3 (173-275)||(47783082-47783184)
chr3 (171-275)||(26914452-26914555)
chr3 (179-269)||(23314684-23314774)
chr3 (215-273)||(40905808-40905866)
chr3 (160-275)||(47783069-47783184)
chr3 (175-275)||(29637439-29637539)
chr3 (166-275)||(26104222-26104331)
chr3 (175-240)||(40905808-40905873)
chr3 (174-262)||(3956175-3956263)
chr3 (188-260)||(30443757-30443829)
chr3 (188-260)||(30443757-30443829)
chr3 (157-248)||(15282627-15282718)
chr3 (173-276)||(26914453-26914555)
chr3 (167-216)||(21383765-21383814)
chr3 (175-251)||(46733045-46733121)
[»] chr1 (23 HSPs)
chr1 (160-288)||(3739805-3739933)
chr1 (166-282)||(3739811-3739927)
chr1 (175-276)||(29855061-29855162)
chr1 (152-273)||(29855041-29855162)
chr1 (160-273)||(19758261-19758375)
chr1 (159-273)||(47543605-47543719)
chr1 (171-269)||(37918916-37919014)
chr1 (218-282)||(3694036-3694100)
chr1 (221-277)||(35310304-35310360)
chr1 (211-282)||(30693332-30693403)
chr1 (202-276)||(5056327-5056401)
chr1 (202-274)||(6061493-6061565)
chr1 (220-273)||(24023975-24024028)
chr1 (162-275)||(29846626-29846739)
chr1 (211-274)||(30295927-30295990)
chr1 (160-267)||(31784748-31784854)
chr1 (159-198)||(38067215-38067254)
chr1 (202-256)||(10498359-10498413)
chr1 (194-260)||(48050938-48051004)
chr1 (179-276)||(37918917-37919014)
chr1 (195-251)||(19391910-19391966)
chr1 (175-215)||(19758335-19758375)
chr1 (172-216)||(35310315-35310359)
[»] chr2 (52 HSPs)
chr2 (171-288)||(31469062-31469179)
chr2 (160-276)||(10459269-10459385)
chr2 (166-281)||(31469068-31469183)
chr2 (159-282)||(10459256-10459379)
chr2 (159-274)||(944776-944891)
chr2 (166-276)||(16180432-16180542)
chr2 (171-273)||(38935365-38935467)
chr2 (175-276)||(43398844-43398945)
chr2 (163-275)||(41374533-41374645)
chr2 (167-282)||(16180432-16180547)
chr2 (211-282)||(17437168-17437239)
chr2 (160-267)||(24037575-24037682)
chr2 (160-275)||(43042170-43042285)
chr2 (176-262)||(18007506-18007592)
chr2 (161-273)||(16564384-16564494)
chr2 (174-274)||(35311190-35311290)
chr2 (205-273)||(2884262-2884330)
chr2 (160-223)||(29291120-29291183)
chr2 (193-275)||(19924308-19924390)
chr2 (158-223)||(33829378-33829443)
chr2 (159-276)||(38935366-38935483)
chr2 (173-274)||(41374533-41374634)
chr2 (174-274)||(944776-944876)
chr2 (221-273)||(7932749-7932801)
chr2 (174-270)||(11386318-11386414)
chr2 (175-273)||(41912083-41912182)
chr2 (224-282)||(29291119-29291177)
chr2 (218-276)||(33829392-33829450)
chr2 (171-273)||(43398844-43398946)
chr2 (208-273)||(44726821-44726886)
chr2 (178-274)||(11386318-11386414)
chr2 (159-239)||(17437166-17437246)
chr2 (175-274)||(4224983-4225082)
chr2 (192-255)||(13724136-13724199)
chr2 (205-263)||(35693934-35693992)
chr2 (173-227)||(41099030-41099084)
chr2 (220-273)||(15660702-15660755)
chr2 (230-275)||(41099039-41099084)
chr2 (222-274)||(2949047-2949099)
chr2 (155-263)||(4445850-4445958)
chr2 (159-274)||(35311190-35311305)
chr2 (175-254)||(7932749-7932828)
chr2 (175-281)||(16564384-16564488)
chr2 (165-272)||(25089911-25090017)
chr2 (176-272)||(10814868-10814961)
chr2 (174-275)||(30517861-30517959)
chr2 (232-274)||(30517917-30517959)
chr2 (157-190)||(19263959-19263992)
chr2 (157-190)||(28599086-28599119)
chr2 (211-271)||(4592447-4592507)
chr2 (154-190)||(16492888-16492924)
chr2 (223-275)||(32614141-32614193)
[»] chr5 (51 HSPs)
chr5 (160-287)||(39030555-39030682)
chr5 (160-281)||(33669918-33670039)
chr5 (175-276)||(39030569-39030670)
chr5 (154-282)||(34252714-34252842)
chr5 (159-282)||(34252707-34252830)
chr5 (159-276)||(33669930-33670047)
chr5 (160-276)||(2424429-2424545)
chr5 (160-282)||(9956489-9956611)
chr5 (175-273)||(15119303-15119401)
chr5 (156-273)||(2424444-2424561)
chr5 (180-273)||(26835241-26835334)
chr5 (174-273)||(17555949-17556049)
chr5 (211-274)||(42324922-42324985)
chr5 (211-275)||(38958065-38958129)
chr5 (186-273)||(504130-504215)
chr5 (160-256)||(38958052-38958148)
chr5 (212-262)||(26730097-26730147)
chr5 (212-273)||(26746239-26746299)
chr5 (202-287)||(33498353-33498438)
chr5 (202-274)||(968315-968387)
chr5 (213-273)||(42708588-42708648)
chr5 (175-262)||(2884046-2884132)
chr5 (175-282)||(14646368-14646475)
chr5 (174-273)||(30293382-30293481)
chr5 (174-261)||(42324898-42324985)
chr5 (175-260)||(8802791-8802877)
chr5 (211-273)||(20185355-20185416)
chr5 (160-246)||(37040136-37040221)
chr5 (155-262)||(504110-504215)
chr5 (202-281)||(5727714-5727792)
chr5 (221-272)||(16500564-16500615)
chr5 (202-261)||(20219514-20219573)
chr5 (175-218)||(26835291-26835334)
chr5 (202-253)||(28023956-28024007)
chr5 (229-276)||(29960470-29960517)
chr5 (227-261)||(11507888-11507922)
chr5 (227-261)||(11515259-11515293)
chr5 (227-261)||(11522661-11522695)
chr5 (227-261)||(11530073-11530107)
chr5 (175-273)||(15119303-15119401)
chr5 (165-251)||(33498357-33498443)
chr5 (160-218)||(36858023-36858081)
chr5 (169-274)||(36058764-36058869)
chr5 (229-274)||(40898490-40898535)
chr5 (174-246)||(968315-968387)
chr5 (233-273)||(2884092-2884132)
chr5 (217-281)||(4576877-4576941)
chr5 (177-229)||(10895462-10895514)
chr5 (160-276)||(25467097-25467213)
chr5 (229-281)||(36858022-36858074)
chr5 (233-273)||(37040080-37040120)
[»] chr7 (25 HSPs)
chr7 (159-269)||(16866391-16866501)
chr7 (158-274)||(3719866-3719982)
chr7 (179-276)||(16866404-16866501)
chr7 (211-276)||(6803310-6803375)
chr7 (160-276)||(5026143-5026256)
chr7 (171-262)||(18731992-18732083)
chr7 (211-274)||(44816472-44816535)
chr7 (171-246)||(5026142-5026217)
chr7 (174-276)||(3719880-3719982)
chr7 (202-281)||(47967911-47967990)
chr7 (186-276)||(18731993-18732083)
chr7 (175-273)||(23971191-23971288)
chr7 (211-273)||(30794447-30794509)
chr7 (174-273)||(14773476-14773576)
chr7 (174-273)||(15223928-15224028)
chr7 (208-282)||(1554874-1554948)
chr7 (175-273)||(23971191-23971288)
chr7 (232-273)||(27147603-27147644)
chr7 (158-274)||(3769742-3769858)
chr7 (176-271)||(4259313-4259408)
chr7 (171-215)||(6803309-6803353)
chr7 (170-261)||(30794442-30794534)
chr7 (219-267)||(34515855-34515903)
chr7 (169-240)||(44816467-44816538)
chr7 (159-191)||(13591028-13591060)
[»] chr6 (31 HSPs)
chr6 (160-276)||(31323817-31323933)
chr6 (160-276)||(28004614-28004730)
chr6 (157-276)||(14446699-14446818)
chr6 (160-277)||(30531180-30531297)
chr6 (159-276)||(31323804-31323921)
chr6 (159-275)||(28004627-28004743)
chr6 (156-262)||(2282415-2282521)
chr6 (157-273)||(35003765-35003881)
chr6 (158-273)||(1986210-1986325)
chr6 (211-272)||(9829898-9829959)
chr6 (153-218)||(28756641-28756706)
chr6 (156-282)||(30531168-30531291)
chr6 (211-274)||(8437816-8437879)
chr6 (228-273)||(28756663-28756708)
chr6 (215-276)||(31522654-31522714)
chr6 (160-246)||(9675753-9675839)
chr6 (152-282)||(14446679-14446809)
chr6 (173-273)||(7549781-7549890)
chr6 (159-240)||(13320849-13320930)
chr6 (186-282)||(2282415-2282511)
chr6 (205-273)||(13422138-13422206)
chr6 (211-282)||(7343284-7343354)
chr6 (232-275)||(7549847-7549890)
chr6 (203-262)||(8215222-8215281)
chr6 (223-274)||(28596080-28596131)
chr6 (161-215)||(7343305-7343359)
chr6 (233-263)||(8830900-8830930)
chr6 (174-223)||(28596080-28596129)
chr6 (185-273)||(8211799-8211887)
chr6 (202-274)||(9675767-9675839)
chr6 (202-262)||(33822305-33822365)
[»] scaffold2113 (2 HSPs)
scaffold2113 (160-276)||(568-683)
scaffold2113 (167-282)||(574-688)
[»] chr4 (31 HSPs)
chr4 (159-282)||(12276817-12276940)
chr4 (211-276)||(55827283-55827348)
chr4 (211-282)||(55762906-55762977)
chr4 (165-275)||(12276816-12276926)
chr4 (174-272)||(54235227-54235325)
chr4 (167-273)||(30848588-30848696)
chr4 (171-276)||(54009986-54010090)
chr4 (160-216)||(55762927-55762983)
chr4 (171-227)||(55827293-55827349)
chr4 (171-276)||(2871501-2871606)
chr4 (160-273)||(44124222-44124335)
chr4 (171-275)||(4423153-4423257)
chr4 (230-281)||(2734177-2734228)
chr4 (159-274)||(54235227-54235342)
chr4 (215-269)||(3249695-3249749)
chr4 (208-283)||(21606026-21606103)
chr4 (168-276)||(2871497-2871605)
chr4 (158-274)||(24980614-24980730)
chr4 (173-276)||(4423153-4423256)
chr4 (160-218)||(2734170-2734228)
chr4 (217-275)||(18995179-18995237)
chr4 (223-276)||(18508871-18508924)
chr4 (230-271)||(48514596-48514637)
chr4 (171-276)||(54009987-54010091)
chr4 (163-215)||(18508881-18508933)
chr4 (220-276)||(33759429-33759484)
chr4 (228-276)||(40391259-40391307)
chr4 (202-243)||(5496884-5496925)
chr4 (157-190)||(28669232-28669265)
chr4 (193-261)||(41615703-41615772)
chr4 (160-240)||(3249676-3249756)
[»] chr8 (21 HSPs)
chr8 (173-273)||(35901039-35901139)
chr8 (161-276)||(7974778-7974893)
chr8 (175-273)||(33557781-33557879)
chr8 (193-266)||(13209977-13210050)
chr8 (166-262)||(11114253-11114349)
chr8 (175-275)||(35901039-35901139)
chr8 (202-273)||(8777775-8777846)
chr8 (174-273)||(29110965-29111064)
chr8 (211-274)||(29111001-29111064)
chr8 (175-251)||(8777775-8777851)
chr8 (160-267)||(15114629-15114737)
chr8 (202-273)||(9548082-9548153)
chr8 (230-282)||(11114297-11114349)
chr8 (173-260)||(29797944-29798034)
chr8 (153-272)||(8260079-8260197)
chr8 (174-273)||(8637235-8637334)
chr8 (170-215)||(7974850-7974895)
chr8 (182-255)||(13209977-13210050)
chr8 (157-273)||(44080662-44080779)
chr8 (232-276)||(28725589-28725633)
chr8 (160-192)||(35344248-35344280)
[»] scaffold0027 (2 HSPs)
scaffold0027 (217-275)||(13178-13236)
scaffold0027 (160-218)||(13165-13223)
[»] scaffold0126 (1 HSPs)
scaffold0126 (212-275)||(28171-28234)
[»] scaffold0097 (1 HSPs)
scaffold0097 (211-262)||(37928-37979)
[»] scaffold0034 (1 HSPs)
scaffold0034 (186-273)||(94952-95039)
[»] scaffold0650 (1 HSPs)
scaffold0650 (190-254)||(20-84)
[»] scaffold0233 (1 HSPs)
scaffold0233 (212-273)||(18291-18351)
[»] scaffold0072 (1 HSPs)
scaffold0072 (175-273)||(20368-20466)
[»] scaffold0067 (1 HSPs)
scaffold0067 (211-273)||(35946-36008)


Alignment Details
Target: chr3 (Bit Score: 126; Significance: 8e-65; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 8 - 161
Target Start/End: Complemental strand, 12365367 - 12365214
Alignment:
Q  8 cttacttcacttaggactggtccaagttggtttctccaccattctaaaggagagtaccattcgagtgcagtccagattaatgacttgtgattcttaggat 107  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12365367 cttacttcacttaggactggtccaagttggattctccaccattctaaaggagagtaccattcgagtgcagtccagattaatgacttgtgattcttaggat 12365268  T
Q  108 tcatgagatgctggtgcattgctttagctgggaaaaatatgggcataatatata 161  Q
    ||||||||||||||  |||||||| || ||||| ||| ||||||||||||||||    
T  12365267 tcatgagatgctggcacattgcttcagttgggacaaagatgggcataatatata 12365214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 289 - 385
Target Start/End: Complemental strand, 12365212 - 12365115
Alignment:
Q  289 aatggtggcacaccaaatataccaaagatgattttcagtaaatctagcatttggattt-acatgaatggtaaataaaaaggcgtatcgggaagaaaag 385  Q
    ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  12365212 aatggcggcacaccaaatataccaaagatgattttcagtaaatttagcatttggatttaacatgaatggtaaataaaaaggtgtatcgggaagaaaag 12365115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 171 - 274
Target Start/End: Original strand, 32221472 - 32221575
Alignment:
Q  171 tcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatat 270  Q
    ||||||||| ||||||||||||| ||| |  || || || ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| ||    
T  32221472 tcccaaaatgtaagcaaaaattgatcagcataaattgatgtatttggtacaaattttgaaccaaatacattaacttttgttgactaatttttgcttacat 32221571  T
Q  271 tttg 274  Q
    ||||    
T  32221572 tttg 32221575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 158 - 288
Target Start/End: Complemental strand, 46829163 - 46829040
Alignment:
Q  158 tatactccctccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaa 257  Q
    |||||||||| | ||| ||||||||||||||||||||||||| ||||||||| |||||| ||  |||     |||||||||||| |||||||||||||||    
T  46829163 tatactcccttcgtcctaaaatataagcaaaaattggtcaacaaaagttaatgtatttgata--aat-----accaaatacattgacttttgttgaccaa 46829071  T
Q  258 tttttgcttatattttggggcggagtagtat 288  Q
    |||||||||||||||| || |||| ||||||    
T  46829070 tttttgcttatattttaggacggaatagtat 46829040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 175 - 273
Target Start/End: Original strand, 46829055 - 46829146
Alignment:
Q  175 aaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatatttt 273  Q
    ||||||||||||||||||||||||| ||||| ||| |||||||||       || | ||||||||||||||||||||||||||||||||||||||||||    
T  46829055 aaaatataagcaaaaattggtcaacaaaagtcaatgtatttggta-------tttatcaaatacattaacttttgttgaccaatttttgcttatatttt 46829146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 167 - 273
Target Start/End: Complemental strand, 31280267 - 31280161
Alignment:
Q  167 tccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgctt 266  Q
    ||||||||||||  |||| |||||| | |||||  || ||||| ||| ||||||||||||| ||||||||||||||| ||||||||| |||||||| |||    
T  31280267 tccatcccaaaaggtaaggaaaaatggatcaacataaattaatgtatatggtacaaattttgaaccaaatacattaaattttgttgatcaatttttactt 31280168  T
Q  267 atatttt 273  Q
    |||||||    
T  31280167 atatttt 31280161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 161 - 281
Target Start/End: Complemental strand, 32221588 - 32221468
Alignment:
Q  161 actccctccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaattt 260  Q
    ||||||||| |  |||||| |||||||||||| |||||| ||||||||| |||||||| |||| |||  ||||||||||| || || || ||| ||||||    
T  32221588 actccctccgtatcaaaatgtaagcaaaaattagtcaacaaaagttaatgtatttggttcaaaatttgtaccaaatacatcaatttatgctgatcaattt 32221489  T
Q  261 ttgcttatattttggggcgga 281  Q
    ||||||| |||||||| ||||    
T  32221488 ttgcttacattttgggacgga 32221468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 173 - 275
Target Start/End: Complemental strand, 47783184 - 47783082
Alignment:
Q  173 ccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatattt 272  Q
    |||||||||||||||||||  ||||||  |||   || ||| || |||||||||| |||||||||||||||||||| ||||||||||||| |||| ||||    
T  47783184 ccaaaatataagcaaaaatgagtcaacataagccgatgtatctgatacaaattttgaaccaaatacattaactttttttgaccaatttttacttacattt 47783085  T
Q  273 tgg 275  Q
    |||    
T  47783084 tgg 47783082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 171 - 275
Target Start/End: Original strand, 26914452 - 26914555
Alignment:
Q  171 tcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatat 270  Q
    ||||||||| ||||||||||| || ||||  ||||| || ||||| ||| ||||||| ||||| ||||||||| ||||||||| ||||||||||||| ||    
T  26914452 tcccaaaatgtaagcaaaaat-ggacaacttaagttgatgtatttagtataaattttgaaccacatacattaatttttgttgatcaatttttgcttacat 26914550  T
Q  271 tttgg 275  Q
    |||||    
T  26914551 tttgg 26914555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 179 - 269
Target Start/End: Original strand, 23314684 - 23314774
Alignment:
Q  179 tataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttata 269  Q
    ||||||||||| |||||||| ||||||| ||||| || || |||| |||||||||||||||||| ||||  |||||| | |||||||||||    
T  23314684 tataagcaaaagttggtcaaagaaagttgatatactttgtccaaaattttaaccaaatacattacctttctttgacctacttttgcttata 23314774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 215 - 273
Target Start/End: Complemental strand, 40905866 - 40905808
Alignment:
Q  215 tggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatatttt 273  Q
    ||||| ||||||| ||||||||| ||||||||||||||||||||||||||||| |||||    
T  40905866 tggtataaattttgaaccaaataaattaacttttgttgaccaatttttgcttacatttt 40905808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 160 - 275
Target Start/End: Original strand, 47783069 - 47783184
Alignment:
Q  160 tactccctccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatt 259  Q
    |||||| ||||| ||||||| |||| |||||||||||||  ||||||||| |||||||| |||| |||  | || ||||||   ||| |||||||  |||    
T  47783069 tactccttccattccaaaatgtaagtaaaaattggtcaaaaaaagttaatgtatttggttcaaaatttgtatcagatacatcggcttatgttgactcatt 47783168  T
Q  260 tttgcttatattttgg 275  Q
    ||||||||||||||||    
T  47783169 tttgcttatattttgg 47783184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 175 - 275
Target Start/End: Original strand, 29637439 - 29637539
Alignment:
Q  175 aaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatattttg 274  Q
    ||||| |||| ||||||  ||||||  || |||||||||||| |||||||||| ||||||||||  ||| || ||||||| ||||| | |||||||||||    
T  29637439 aaaatgtaagaaaaaataagtcaacataaattaatatatttgatacaaattttgaaccaaatactgtaatttatgttgactaatttctacttatattttg 29637538  T
Q  275 g 275  Q
    |    
T  29637539 g 29637539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 166 - 275
Target Start/End: Complemental strand, 26104331 - 26104222
Alignment:
Q  166 ctccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgct 265  Q
    |||||||| ||||| |||||||||||  ||||||  || || || | |||| |||||||||| ||| ||||||||||  ||||||| ||||||||||  |    
T  26104331 ctccatcctaaaatgtaagcaaaaatgagtcaacataaattgatttgtttgatacaaattttgaactaaatacattagtttttgttaaccaatttttatt 26104232  T
Q  266 tatattttgg 275  Q
    || |||||||    
T  26104231 tacattttgg 26104222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 240
Target Start/End: Original strand, 40905808 - 40905873
Alignment:
Q  175 aaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacat 240  Q
    ||||| ||||||||||||||||||| ||||||||| |||||||| |||| |||  |||| ||||||    
T  40905808 aaaatgtaagcaaaaattggtcaacaaaagttaatttatttggttcaaaatttataccagatacat 40905873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 174 - 262
Target Start/End: Complemental strand, 3956263 - 3956175
Alignment:
Q  174 caaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaattttt 262  Q
    |||||||||| | ||||| | |||||  || ||| |||||||| | |||||||| ||| ||||||||| | ||||||||||||||||||    
T  3956263 caaaatataaacgaaaatggatcaacataacttactatatttgatccaaattttaaactaaatacatttatttttgttgaccaattttt 3956175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 188 - 260
Target Start/End: Original strand, 30443757 - 30443829
Alignment:
Q  188 aaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaattt 260  Q
    |||| ||||||| ||||||||| ||||||||  | ||| | |||||||||||| |||||| ||||||||||||    
T  30443757 aaatgggtcaacaaaagttaatgtatttggtctatattatgaaccaaatacatcaactttagttgaccaattt 30443829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 188 - 260
Target Start/End: Complemental strand, 30443829 - 30443757
Alignment:
Q  188 aaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaattt 260  Q
    |||||||||||| |||||| || |||||||| || | | |  |||||||||||||||||||||||||| ||||    
T  30443829 aaattggtcaactaaagttgatgtatttggttcataatatagaccaaatacattaacttttgttgacccattt 30443757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 157 - 248
Target Start/End: Original strand, 15282627 - 15282718
Alignment:
Q  157 atatactccctccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaactttt 248  Q
    ||||||| || || ||||||||||||| ||||||| | |||||  ||||| ||  || || |||||||||| || |||||||||||||||||    
T  15282627 atatacttccgccgtcccaaaatataaacaaaaatggatcaacataagttgatgaatctgatacaaattttaaatcaaatacattaactttt 15282718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 276
Target Start/End: Complemental strand, 26914555 - 26914453
Alignment:
Q  173 ccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatattt 272  Q
    ||||||| ||||||||||||| ||||| ||| ||||| ||| |||| |||| |||  || |||||||| |||||  |||| || ||||||||||| ||||    
T  26914555 ccaaaatgtaagcaaaaattgatcaacaaaaattaatgtatgtggttcaaaatttatactaaatacatcaacttaagttgtcc-atttttgcttacattt 26914457  T
Q  273 tggg 276  Q
    ||||    
T  26914456 tggg 26914453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 167 - 216
Target Start/End: Complemental strand, 21383814 - 21383765
Alignment:
Q  167 tccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttg 216  Q
    |||||||||||||||||||| |||||| ||||| |||  |||||||||||    
T  21383814 tccatcccaaaatataagcagaaattgatcaacaaaaactaatatatttg 21383765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 251
Target Start/End: Complemental strand, 46733121 - 46733045
Alignment:
Q  175 aaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgtt 251  Q
    ||||| |||||||||||  ||||||| ||| | ||  ||||| |||||||||| || |||||||||||| |||||||    
T  46733121 aaaatgtaagcaaaaataagtcaacgtaagctgatgcatttgatacaaattttgaatcaaatacattaatttttgtt 46733045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 113; Significance: 5e-57; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 160 - 288
Target Start/End: Original strand, 3739805 - 3739933
Alignment:
Q  160 tactccctccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatt 259  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  3739805 tactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgaccaatt 3739904  T
Q  260 tttgcttatattttggggcggagtagtat 288  Q
    |||||||||||||| || |||||||||||    
T  3739905 tttgcttatattttaggacggagtagtat 3739933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 166 - 282
Target Start/End: Complemental strand, 3739927 - 3739811
Alignment:
Q  166 ctccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgct 265  Q
    |||| ||| ||||||||||||||||||||||||| ||||||||| ||||||||  ||| |||  |||||||||||||||||| |||||||||||||||||    
T  3739927 ctccgtcctaaaatataagcaaaaattggtcaacaaaagttaatgtatttggttaaaaatttgtaccaaatacattaactttcgttgaccaatttttgct 3739828  T
Q  266 tatattttggggcggag 282  Q
    ||||||||||| |||||    
T  3739827 tatattttgggacggag 3739811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 175 - 276
Target Start/End: Complemental strand, 29855162 - 29855061
Alignment:
Q  175 aaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatattttg 274  Q
    ||||||||||||||||||| ||||| ||||||||| ||||| |||||||||||||||||||||||| ||||||||||||  |||||| ||||||||||||    
T  29855162 aaaatataagcaaaaattgatcaacaaaagttaatgtatttcgtacaaatttttaaccaaatacatcaacttttgttgattaattttcgcttatattttg 29855063  T
Q  275 gg 276  Q
    ||    
T  29855062 gg 29855061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 152 - 273
Target Start/End: Original strand, 29855041 - 29855162
Alignment:
Q  152 ataatatatactccctccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgtt 251  Q
    ||||| ||||||||| | |||||||||||||||| ||||||  ||||| |||||| || ||||||||  ||| |||  || |||||||||||||||||||    
T  29855041 ataatttatactcccacaatcccaaaatataagcgaaaattaatcaacaaaagttgatgtatttggttaaaaatttgtacgaaatacattaacttttgtt 29855140  T
Q  252 gaccaatttttgcttatatttt 273  Q
    || |||||||||||||||||||    
T  29855141 gatcaatttttgcttatatttt 29855162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 160 - 273
Target Start/End: Original strand, 19758261 - 19758375
Alignment:
Q  160 tactccctccatcccaaaatataagcaaaaattggtc-aacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaat 258  Q
    |||||| ||| ||||||||| |||||||||||  ||  |||| ||||| || ||||||||||||||| | ||| ||||||||||||||||||||||||||    
T  19758261 tactccttccgtcccaaaatgtaagcaaaaatgagtataacgtaagttgatgtatttggtacaaattataaactaaatacattaacttttgttgaccaat 19758360  T
Q  259 ttttgcttatatttt 273  Q
    |||| ||||||||||    
T  19758361 ttttacttatatttt 19758375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 159 - 273
Target Start/End: Complemental strand, 47543719 - 47543605
Alignment:
Q  159 atactccctccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaat 258  Q
    ||||||||||| ||||||||| ||||| |||||     | || ||||| || ||||||||||||||||| |||||||| |||||| ||||||||||||||    
T  47543719 atactccctccgtcccaaaatgtaagccaaaatgaaatagcgtaagttgatgtatttggtacaaattttgaaccaaattcattaatttttgttgaccaat 47543620  T
Q  259 ttttgcttatatttt 273  Q
    ||||  |||||||||    
T  47543619 tttttattatatttt 47543605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 171 - 269
Target Start/End: Original strand, 37918916 - 37919014
Alignment:
Q  171 tcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttata 269  Q
    ||||||||| |||||||||||   |||||  ||||| || |||||| || ||||||| ||||||||||||| |||||||||||| |||||| |||||||    
T  37918916 tcccaaaatgtaagcaaaaatgaatcaacataagttgatgtatttgatataaattttaaaccaaatacattcacttttgttgacaaattttcgcttata 37919014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 218 - 282
Target Start/End: Original strand, 3694036 - 3694100
Alignment:
Q  218 tacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatattttggggcggag 282  Q
    |||||||||| || |||||||||||| |||||||||||||||| | |||||||||||| ||||||    
T  3694036 tacaaattttgaatcaaatacattaatttttgttgaccaatttctacttatattttggagcggag 3694100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 221 - 277
Target Start/End: Original strand, 35310304 - 35310360
Alignment:
Q  221 aaatttttaaccaaatacattaacttttgttgaccaatttttgcttatattttgggg 277  Q
    ||||||| || |||||||||||| |||||||||||||||||| ||||||||||||||    
T  35310304 aaattttaaatcaaatacattaatttttgttgaccaatttttacttatattttgggg 35310360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 211 - 282
Target Start/End: Complemental strand, 30693403 - 30693332
Alignment:
Q  211 tatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatattttggggcggag 282  Q
    ||||||||||||||||| || |||||||||||| ||||||||| ||||||||  ||||||||| || |||||    
T  30693403 tatttggtacaaattttgaatcaaatacattaatttttgttgatcaatttttatttatattttcggacggag 30693332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 202 - 276
Target Start/End: Original strand, 5056327 - 5056401
Alignment:
Q  202 aagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatattttggg 276  Q
    ||||| || |||||| |||||||||| || ||||||| |||| |||| |||||||||||||| ||||||||||||    
T  5056327 aagttgatgtatttgatacaaattttgaatcaaatacgttaatttttattgaccaatttttgtttatattttggg 5056401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 202 - 274
Target Start/End: Original strand, 6061493 - 6061565
Alignment:
Q  202 aagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatattttg 274  Q
    |||||||| ||| | ||||||||||| || |||||||||||| |||||||||||||| |||||| | ||||||    
T  6061493 aagttaatgtatctagtacaaattttaaaacaaatacattaatttttgttgaccaatatttgctcacattttg 6061565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 220 - 273
Target Start/End: Original strand, 24023975 - 24024028
Alignment:
Q  220 caaatttttaaccaaatacattaacttttgttgaccaatttttgcttatatttt 273  Q
    |||||||| ||||| ||||||||||||||||||| ||||||||  |||||||||    
T  24023975 caaattttgaaccacatacattaacttttgttgatcaattttttgttatatttt 24024028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 162 - 275
Target Start/End: Original strand, 29846626 - 29846739
Alignment:
Q  162 ctccctccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttt 261  Q
    |||||||| | | |||||||||| |||| | |||||||  ||| | |||||||  ||| ||||||| |||| |||||||||| || | ||||||| ||||    
T  29846626 ctccctccgttctaaaatataagtaaaattgggtcaacataagctgatatattcagtataaattttgaaccgaatacattaatttatattgaccattttt 29846725  T
Q  262 tgcttatattttgg 275  Q
    || |||||||||||    
T  29846726 tgtttatattttgg 29846739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 211 - 274
Target Start/End: Complemental strand, 30295990 - 30295927
Alignment:
Q  211 tatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatattttg 274  Q
    ||||||||| || |||| || |||||||| |||||||||||||||||||||  ||| |||||||    
T  30295990 tatttggtataatttttgaatcaaatacaataacttttgttgaccaattttaacttgtattttg 30295927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 160 - 267
Target Start/End: Complemental strand, 31784854 - 31784748
Alignment:
Q  160 tactccctccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatt 259  Q
    |||||||||  ||||||||| |||||||||||| ||||||  ||||| || ||| |  |||||||||| ||| ||||||||| | || |||| ||| |||    
T  31784854 tactccctctgtcccaaaatgtaagcaaaaatttgtcaacataagttgatgtatctaatacaaattttgaacaaaatacattcatttctgtt-accgatt 31784756  T
Q  260 tttgctta 267  Q
    ||||||||    
T  31784755 tttgctta 31784748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 198
Target Start/End: Complemental strand, 38067254 - 38067215
Alignment:
Q  159 atactccctccatcccaaaatataagcaaaaattggtcaa 198  Q
    ||||||||||| |||||||||||||| |||||||||||||    
T  38067254 atactccctccctcccaaaatataaggaaaaattggtcaa 38067215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 202 - 256
Target Start/End: Original strand, 10498359 - 10498413
Alignment:
Q  202 aagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgacca 256  Q
    ||||| ||||||||| |||||||||| ||| ||||| ||||| ||||||||||||    
T  10498359 aagttgatatatttgatacaaattttaaactaaatatattaatttttgttgacca 10498413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 194 - 260
Target Start/End: Original strand, 48050938 - 48051004
Alignment:
Q  194 gtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaattt 260  Q
    |||||| ||||| ||| |||||||| || ||| | |||||||||||| |||||| ||||||||||||    
T  48050938 gtcaacaaaagtaaatgtatttggtccacattatgaaccaaatacatcaactttagttgaccaattt 48051004  T

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Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 276
Target Start/End: Complemental strand, 37919014 - 37918917
Alignment:
Q  179 tataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatattttggg 276  Q
    ||||||| |||||| |||||| ||||| ||| ||||||||  ||| |||  | ||||||||| ||||| ||||||   ||||||||||| ||||||||    
T  37919014 tataagcgaaaatttgtcaacaaaagtgaatgtatttggtttaaaatttatatcaaatacatcaacttatgttgattcatttttgcttacattttggg 37918917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 251
Target Start/End: Original strand, 19391910 - 19391966
Alignment:
Q  195 tcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgtt 251  Q
    ||||| ||||||||||||||| |  ||||||||| |  |||||||||||||||||||    
T  19391910 tcaacaaaagttaatatatttcgaccaaatttttgagaaaatacattaacttttgtt 19391966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 215
Target Start/End: Complemental strand, 19758375 - 19758335
Alignment:
Q  175 aaaatataagcaaaaattggtcaacgaaagttaatatattt 215  Q
    |||||||||| |||||||||||||| ||||||||| |||||    
T  19758375 aaaatataagtaaaaattggtcaacaaaagttaatgtattt 19758335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 35310359 - 35310315
Alignment:
Q  172 cccaaaatataagcaaaaattggtcaacgaaagttaatatatttg 216  Q
    ||||||||||||| |||||||||||||| ||| ||||| ||||||    
T  35310359 cccaaaatataagtaaaaattggtcaacaaaaattaatgtatttg 35310315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 106; Significance: 7e-53; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 171 - 288
Target Start/End: Complemental strand, 31469179 - 31469062
Alignment:
Q  171 tcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatat 270  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31469179 tcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttgatacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatat 31469080  T
Q  271 tttggggcggagtagtat 288  Q
    |||||| |||||||||||    
T  31469079 tttgggacggagtagtat 31469062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 160 - 276
Target Start/End: Complemental strand, 10459385 - 10459269
Alignment:
Q  160 tactccctccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatt 259  Q
    |||||||||| ||||||||| |||||||| ||||||||||  ||||| ||  || || |||||||||| |||||||||||||||||||||||||||||||    
T  10459385 tactccctccgtcccaaaatgtaagcaaagattggtcaacataagttgatgcatctgatacaaattttgaaccaaatacattaacttttgttgaccaatt 10459286  T
Q  260 tttgcttatattttggg 276  Q
    |||||||||||||||||    
T  10459285 tttgcttatattttggg 10459269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 166 - 281
Target Start/End: Original strand, 31469068 - 31469183
Alignment:
Q  166 ctccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgct 265  Q
    |||| ||||||||||||||||||||||||||||| ||||||||| ||||||||  ||| |||  | |||||||||||||||| |||||||||||||||||    
T  31469068 ctccgtcccaaaatataagcaaaaattggtcaacaaaagttaatgtatttggttaaaaatttgtatcaaatacattaactttcgttgaccaatttttgct 31469167  T
Q  266 tatattttggggcgga 281  Q
    ||||||||||| ||||    
T  31469168 tatattttgggacgga 31469183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 159 - 282
Target Start/End: Original strand, 10459256 - 10459379
Alignment:
Q  159 atactccctccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaat 258  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||| |||| |||  | || || ||| ||||| |||||||||||    
T  10459256 atactccctccttcccaaaatataagcaaaaattggtcaacaaaagttaatgtatttggttcaaaatttgtatcagatgcatcaacttatgttgaccaat 10459355  T
Q  259 ttttgcttatattttggggcggag 282  Q
     |||||||| |||||||| |||||    
T  10459356 ctttgcttacattttgggacggag 10459379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 159 - 274
Target Start/End: Complemental strand, 944891 - 944776
Alignment:
Q  159 atactccctccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaat 258  Q
    ||||||||||| || |||||| |||| ||||||| ||||||  ||||| || ||||||||||||||||| ||| |||||||||||||||| |||| | ||    
T  944891 atactccctccgtctcaaaatgtaagtaaaaattagtcaacataagttgatgtatttggtacaaattttgaactaaatacattaacttttattgatcgat 944792  T
Q  259 ttttgcttatattttg 274  Q
    ||||||||||||||||    
T  944791 ttttgcttatattttg 944776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 166 - 276
Target Start/End: Original strand, 16180432 - 16180542
Alignment:
Q  166 ctccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgct 265  Q
    |||| ||||||||| |||||||||||| ||||||  || || || ||||   || ||||||| ||||||||||||||||||||||||||||| |||| ||    
T  16180432 ctccgtcccaaaatgtaagcaaaaattagtcaacataaattgatgtattaaatataaattttgaaccaaatacattaacttttgttgaccaaattttact 16180531  T
Q  266 tatattttggg 276  Q
    |||||||||||    
T  16180532 tatattttggg 16180542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 171 - 273
Target Start/End: Original strand, 38935365 - 38935467
Alignment:
Q  171 tcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatat 270  Q
    |||||||||||||||||||||  ||||||  ||||| || |||||| |||| ||||| ||| |||||||||||||||||||||  |||||||| ||||||    
T  38935365 tcccaaaatataagcaaaaatgagtcaacataagttgatgtatttgatacagattttgaacaaaatacattaacttttgttgagtaatttttgtttatat 38935464  T
Q  271 ttt 273  Q
    |||    
T  38935465 ttt 38935467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 175 - 276
Target Start/End: Original strand, 43398844 - 43398945
Alignment:
Q  175 aaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatattttg 274  Q
    ||||| |||| |||||| ||||||   ||||| || ||||||||||||||||| ||||||||||||||||||||||| || |||||||| ||| ||||||    
T  43398844 aaaatgtaagtaaaaatgggtcaatataagttgatgtatttggtacaaattttgaaccaaatacattaacttttgttaacaaatttttgtttagattttg 43398943  T
Q  275 gg 276  Q
    ||    
T  43398944 gg 43398945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 163 - 275
Target Start/End: Complemental strand, 41374645 - 41374533
Alignment:
Q  163 tccctccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaattttt 262  Q
    ||||||| || ||||||||||| ||||||| |||||||||||||||| |||||| | |||| |||  ||||||||||| ||||| |||| ||  ||||||    
T  41374645 tccctccgtctcaaaatataagtaaaaattagtcaacgaaagttaatgtatttgattcaaagtttataccaaatacatcaacttgtgttcactcattttt 41374546  T
Q  263 gcttatattttgg 275  Q
    ||||| |||||||    
T  41374545 gcttacattttgg 41374533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 167 - 282
Target Start/End: Complemental strand, 16180547 - 16180432
Alignment:
Q  167 tccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgctt 266  Q
    |||||||||||||||||| |||| ||||||||| ||||||||| |||||||| |||| |||  |   ||||||| || || ||||||| |||||||||||    
T  16180547 tccatcccaaaatataagtaaaatttggtcaacaaaagttaatgtatttggttcaaaatttatatttaatacatcaatttatgttgactaatttttgctt 16180448  T
Q  267 atattttggggcggag 282  Q
    | |||||||| |||||    
T  16180447 acattttgggacggag 16180432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 211 - 282
Target Start/End: Original strand, 17437168 - 17437239
Alignment:
Q  211 tatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatattttggggcggag 282  Q
    ||||||||||||||||| ||| ||||||||||| |||||||||| |||||||| |||||||||||| |||||    
T  17437168 tatttggtacaaattttgaactaaatacattaatttttgttgacaaatttttgtttatattttgggacggag 17437239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 160 - 267
Target Start/End: Original strand, 24037575 - 24037682
Alignment:
Q  160 tactccctccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatt 259  Q
    |||||| ||| ||| ||||| |||||||||||  ||||||  ||||| |||||||||||||||||||| ||| |||||||| ||||| ||| |||| |||    
T  24037575 tactccatccgtcctaaaatgtaagcaaaaatgagtcaacataagttgatatatttggtacaaattttgaacaaaatacatcaacttatgtcgacccatt 24037674  T
Q  260 tttgctta 267  Q
    ||||||||    
T  24037675 tttgctta 24037682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 160 - 275
Target Start/End: Complemental strand, 43042285 - 43042170
Alignment:
Q  160 tactccctccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatt 259  Q
    |||||||||||||||||||| |||||||||||  || ||| |||||| || ||| || || ||||||| |||| |||||||||| ||||||||| | |||    
T  43042285 tactccctccatcccaaaatgtaagcaaaaatgagtaaacaaaagttgatgtatctgatataaattttgaaccgaatacattaaattttgttgatcgatt 43042186  T
Q  260 tttgcttatattttgg 275  Q
    ||| |||| |||||||    
T  43042185 tttacttacattttgg 43042170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 176 - 262
Target Start/End: Original strand, 18007506 - 18007592
Alignment:
Q  176 aaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaattttt 262  Q
    |||||||| ||||||||| |||| ||||||| ||||||||||||||||||||  ||||||||| |||| |||| |||||||| ||||    
T  18007506 aaatataaacaaaaattgatcaaagaaagttgatatatttggtacaaattttggaccaaatacgttaattttttttgaccaactttt 18007592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 161 - 273
Target Start/End: Complemental strand, 16564494 - 16564384
Alignment:
Q  161 actccctccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaattt 260  Q
    ||||| ||| ||||||||| |||| ||||||  ||||||  ||||| || ||||||||||||||||| ||||||  ||| |||| ||||| |||||||||    
T  16564494 actccttccgtcccaaaatgtaagtaaaaatgagtcaacataagttgatgtatttggtacaaattttgaaccaa--acactaacgtttgtagaccaattt 16564397  T
Q  261 ttgcttatatttt 273  Q
    |||||||||||||    
T  16564396 ttgcttatatttt 16564384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 174 - 274
Target Start/End: Original strand, 35311190 - 35311290
Alignment:
Q  174 caaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgac-caatttttgcttatattt 272  Q
    |||||| ||||||||||| |||||||  |||||| ||||| | ||||||||||| ||||||||||||||||||||||||||  ||||||| |||| ||||    
T  35311190 caaaatgtaagcaaaaatgggtcaacataagtta-tatatcttgtacaaattttgaaccaaatacattaacttttgttgactaaattttttcttacattt 35311288  T
Q  273 tg 274  Q
    ||    
T  35311289 tg 35311290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 205 - 273
Target Start/End: Complemental strand, 2884330 - 2884262
Alignment:
Q  205 ttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatatttt 273  Q
    |||||||||||| || ||||||| ||||||||||||||| |||||||||| ||||||| ||||||||||    
T  2884330 ttaatatatttgatataaattttgaaccaaatacattaatttttgttgacaaatttttacttatatttt 2884262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 160 - 223
Target Start/End: Complemental strand, 29291183 - 29291120
Alignment:
Q  160 tactccctccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaa 223  Q
    |||||||||| ||||||||| ||||||||||||||||||  |||||||||||||||||| ||||    
T  29291183 tactccctccgtcccaaaatgtaagcaaaaattggtcaataaaagttaatatatttggttcaaa 29291120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 193 - 275
Target Start/End: Complemental strand, 19924390 - 19924308
Alignment:
Q  193 ggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatattttgg 275  Q
    |||||||| ||||| || ||||||||||||||||| ||||| |||||||||||||| ||||| || |||| |||| |||||||    
T  19924390 ggtcaacgtaagttgatgtatttggtacaaattttgaaccatatacattaacttttattgactaacttttacttacattttgg 19924308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 158 - 223
Target Start/End: Original strand, 33829378 - 33829443
Alignment:
Q  158 tatactccctccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaa 223  Q
    |||| ||||| | ||||||||||||| ||||||||||||||| ||| |||||||||||||||||||    
T  33829378 tatattccctacgtcccaaaatataaacaaaaattggtcaacaaaaattaatatatttggtacaaa 33829443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 159 - 276
Target Start/End: Complemental strand, 38935483 - 38935366
Alignment:
Q  159 atactccctccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaat 258  Q
    ||||||| ||| ||| ||||||||| ||||||||  ||||| ||||||||| ||||| || |||| | |  | ||||||||| ||||| |||||||  ||    
T  38935483 atactccatccgtccaaaaatataaacaaaaattactcaacaaaagttaatgtattttgttcaaaatctgtatcaaatacatcaacttatgttgactcat 38935384  T
Q  259 ttttgcttatattttggg 276  Q
    ||||||||||||||||||    
T  38935383 ttttgcttatattttggg 38935366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 173 - 274
Target Start/End: Original strand, 41374533 - 41374634
Alignment:
Q  173 ccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatattt 272  Q
    ||||||| |||||||||||  || |||  ||||| || ||||||||| ||| ||| || |||||||||||||||| |||||| ||||||| |||||||||    
T  41374533 ccaaaatgtaagcaaaaatgagtgaacacaagttgatgtatttggtataaactttgaatcaaatacattaactttcgttgactaatttttacttatattt 41374632  T
Q  273 tg 274  Q
    ||    
T  41374633 tg 41374634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 174 - 274
Target Start/End: Original strand, 944776 - 944876
Alignment:
Q  174 caaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatatttt 273  Q
    |||||||||||||||||| | ||||  ||||||||| ||||| || |||| |||  ||||||||||| ||||| ||||||| ||||||| |||| |||||    
T  944776 caaaatataagcaaaaatcgatcaataaaagttaatgtatttagttcaaaatttgtaccaaatacatcaacttatgttgactaatttttacttacatttt 944875  T
Q  274 g 274  Q
    |    
T  944876 g 944876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 221 - 273
Target Start/End: Complemental strand, 7932801 - 7932749
Alignment:
Q  221 aaatttttaaccaaatacattaacttttgttgaccaatttttgcttatatttt 273  Q
    ||||||| |||||||||| ||||||||||||||| ||||||||||||||||||    
T  7932801 aaattttgaaccaaatacgttaacttttgttgactaatttttgcttatatttt 7932749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 174 - 270
Target Start/End: Complemental strand, 11386414 - 11386318
Alignment:
Q  174 caaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatat 270  Q
    |||||||||||||||| ||| |||||  ||||| || |||||| |||||||||| ||  ||||| ||||| ||||||||| ||||||||| ||||||    
T  11386414 caaaatataagcaaaatttgatcaacataagttgatgtatttgatacaaattttgaattaaatatattaatttttgttgatcaatttttgtttatat 11386318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 175 - 273
Target Start/End: Original strand, 41912083 - 41912182
Alignment:
Q  175 aaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaa-tttttgcttatatttt 273  Q
    |||||| ||| ||||||  ||||||  |||||||| ||  ||||||||||||| ||||| ||||||||| ||||||||| ||| ||||||||||||||||    
T  41912083 aaaatacaagtaaaaataagtcaacataagttaatctagctggtacaaattttgaaccagatacattaatttttgttgaacaattttttgcttatatttt 41912182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 224 - 282
Target Start/End: Original strand, 29291119 - 29291177
Alignment:
Q  224 tttttaaccaaatacattaacttttgttgaccaatttttgcttatattttggggcggag 282  Q
    |||| ||||||||| |||||||||| |||||||||||||||||| |||||||| |||||    
T  29291119 ttttgaaccaaatatattaacttttattgaccaatttttgcttacattttgggacggag 29291177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 218 - 276
Target Start/End: Complemental strand, 33829450 - 33829392
Alignment:
Q  218 tacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatattttggg 276  Q
    ||||||||||  |||||||| ||||| ||||||||||||||||||| ||||||||||||    
T  33829450 tacaaattttgtaccaaatatattaatttttgttgaccaatttttgtttatattttggg 33829392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 171 - 273
Target Start/End: Complemental strand, 43398946 - 43398844
Alignment:
Q  171 tcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatat 270  Q
    ||||||||| ||| |||||||| || ||| ||||||||| |||||||| |||| |||  ||||||||||| ||||| | |||||| |||||| |||| ||    
T  43398946 tcccaaaatctaaacaaaaatttgttaacaaaagttaatgtatttggttcaaaatttgtaccaaatacatcaacttatattgacccatttttacttacat 43398847  T
Q  271 ttt 273  Q
    |||    
T  43398846 ttt 43398844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 208 - 273
Target Start/End: Original strand, 44726821 - 44726886
Alignment:
Q  208 atatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatatttt 273  Q
    ||||||||| || ||||||| ||| ||||||||||| ||||||||| |||||||| ||||||||||    
T  44726821 atatatttgatataaattttaaactaaatacattaatttttgttgatcaattttttcttatatttt 44726886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 178 - 274
Target Start/End: Original strand, 11386318 - 11386414
Alignment:
Q  178 atataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatattttg 274  Q
    |||||| ||||||||| ||||| ||| |||||||||||  | |||| |||  | ||||||||| ||||| |||||| ||| ||||||||||||||||    
T  11386318 atataaacaaaaattgatcaacaaaaattaatatatttaattcaaaatttgtatcaaatacatcaacttatgttgatcaaattttgcttatattttg 11386414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 17437246 - 17437166
Alignment:
Q  159 atactccctccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaataca 239  Q
    ||||||||||| ||||||||||||| |||||||| |||||| ||| ||||| ||||| || |||| |||  ||||||||||    
T  17437246 atactccctccgtcccaaaatataaacaaaaatttgtcaacaaaaattaatgtatttagttcaaaatttgtaccaaataca 17437166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 175 - 274
Target Start/End: Original strand, 4224983 - 4225082
Alignment:
Q  175 aaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatattttg 274  Q
    |||||||||| |||| |||||||||  || || || ||| ||||| ||||||| || |||||||  |||||||||||||| || ||||| ||||||||||    
T  4224983 aaaatataagtaaaagttggtcaacataaattgatgtatctggtataaattttgaatcaaatacgataacttttgttgactaaattttgtttatattttg 4225082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 192 - 255
Target Start/End: Complemental strand, 13724199 - 13724136
Alignment:
Q  192 tggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgacc 255  Q
    |||||||| |||||| || ||| |||| ||| ||||||||||||||||| ||||||||||||||    
T  13724199 tggtcaacaaaagttgatgtatctggtccaattttttaaccaaatacatcaacttttgttgacc 13724136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 205 - 263
Target Start/End: Complemental strand, 35693992 - 35693934
Alignment:
Q  205 ttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttg 263  Q
    ||||| |||||| ||| |||||| ||||||||||||||| |||| ||||||||||||||    
T  35693992 ttaatgtatttgatactaattttaaaccaaatacattaatttttattgaccaatttttg 35693934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 227
Target Start/End: Complemental strand, 41099084 - 41099030
Alignment:
Q  173 ccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttt 227  Q
    ||||||| ||||||||||| |||||||  |||||||| |||||||||||||||||    
T  41099084 ccaaaatgtaagcaaaaatgggtcaacataagttaatgtatttggtacaaatttt 41099030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 220 - 273
Target Start/End: Original strand, 15660702 - 15660755
Alignment:
Q  220 caaatttttaaccaaatacattaacttttgttgaccaatttttgcttatatttt 273  Q
    |||||||| || |||||||||||| || |||||| |||||||||||||||||||    
T  15660702 caaattttgaatcaaatacattaatttgtgttgatcaatttttgcttatatttt 15660755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 230 - 275
Target Start/End: Original strand, 41099039 - 41099084
Alignment:
Q  230 accaaatacattaacttttgttgaccaatttttgcttatattttgg 275  Q
    ||||||||||||||||| |||||||| ||||||||||| |||||||    
T  41099039 accaaatacattaacttatgttgacccatttttgcttacattttgg 41099084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 222 - 274
Target Start/End: Complemental strand, 2949099 - 2949047
Alignment:
Q  222 aatttttaaccaaatacattaacttttgttgaccaatttttgcttatattttg 274  Q
    |||||| ||| |||||||||| |||||||| ||||||||||||||| ||||||    
T  2949099 aattttgaacaaaatacattagcttttgttaaccaatttttgcttacattttg 2949047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 155 - 263
Target Start/End: Original strand, 4445850 - 4445958
Alignment:
Q  155 atatatactccctccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgac 254  Q
    ||||||||||  |||||||||||||||||||||||||  || ||   || || || ||||||||||||||||| ||| ||||  ||| ||||||| |||     
T  4445850 atatatactctttccatcccaaaatataagcaaaaataagttaatataaattgatgtatttggtacaaattttgaacaaaatgtattgacttttgctgat 4445949  T
Q  255 caatttttg 263  Q
     ||||||||    
T  4445950 taatttttg 4445958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 159 - 274
Target Start/End: Complemental strand, 35311305 - 35311190
Alignment:
Q  159 atactccctccatcccaaaatataagcaaaaattg-gtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaa 257  Q
    ||||||||||| || |||||| |||| |||||||  |||||| ||||||||| |||||||| |||| |||  || | ||| || ||||| |||||||| |    
T  35311305 atactccctccttcacaaaatgtaagaaaaaatttagtcaacaaaagttaatgtatttggttcaaaatttgtacaagatatat-aacttatgttgaccca 35311207  T
Q  258 tttttgcttatattttg 274  Q
    |||||||||| ||||||    
T  35311206 tttttgcttacattttg 35311190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 175 - 254
Target Start/End: Original strand, 7932749 - 7932828
Alignment:
Q  175 aaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgac 254  Q
    |||||||||||||||||| |||||| ||||||||  |||||||| |||| |||  | || |||||| ||||| |||||||    
T  7932749 aaaatataagcaaaaattagtcaacaaaagttaacgtatttggttcaaaatttatatcagatacatcaacttatgttgac 7932828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 175 - 281
Target Start/End: Original strand, 16564384 - 16564488
Alignment:
Q  175 aaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatattttg 274  Q
    |||||||||||||||||||||| || || |||| | |  ||||| |||| |||  ||||||||||| ||||| |||||||  |||||| |||| ||||||    
T  16564384 aaaatataagcaaaaattggtctacaaacgttagtgt--ttggttcaaaatttgtaccaaatacatcaacttatgttgactcatttttacttacattttg 16564481  T
Q  275 gggcgga 281  Q
    || ||||    
T  16564482 ggacgga 16564488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 272
Target Start/End: Original strand, 25089911 - 25090017
Alignment:
Q  165 cctccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgc 264  Q
    |||| |||||||||| |||| |||||| | | |||  |||||  | |||||| |||||||||| || |||||| || || ||||||| ||||||||||||    
T  25089911 cctcaatcccaaaatgtaagaaaaaatggattaacataagttgttgtatttgatacaaattttgaagcaaatatatgaagttttgtt-accaatttttgc 25090009  T
Q  265 ttatattt 272  Q
    ||||||||    
T  25090010 ttatattt 25090017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 272
Target Start/End: Complemental strand, 10814961 - 10814868
Alignment:
Q  176 aaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatattt 272  Q
    ||||||||||||||||||||||| ||||    || ||||||||  ||| ||| || |||||||||  |||||  |||||||||||||| ||||||||    
T  10814961 aaatataagcaaaaattggtcaaagaaa---tatgtatttggtctaaaatttgaatcaaatacatccactttgtttgaccaatttttgtttatattt 10814868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 275
Target Start/End: Complemental strand, 30517959 - 30517861
Alignment:
Q  174 caaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatatttt 273  Q
    ||||||||||| ||||||| |||||| ||| ||||| |||||| | ||||  || |||||||| ||| |||||||||| ||| ||||||  |||||||||    
T  30517959 caaaatataagtaaaaatttgtcaacaaaaattaatgtatttgatccaaa--ttgaaccaaatgcatcaacttttgtttaccgattttt-attatatttt 30517863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 232 - 274
Target Start/End: Original strand, 30517917 - 30517959
Alignment:
Q  232 caaatacattaacttttgttgaccaatttttgcttatattttg 274  Q
    |||||||||||| |||||||||| ||||||| |||||||||||    
T  30517917 caaatacattaatttttgttgacaaatttttacttatattttg 30517959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 190
Target Start/End: Original strand, 19263959 - 19263992
Alignment:
Q  157 atatactccctccatcccaaaatataagcaaaaa 190  Q
    ||||||||||||||||||| ||||||||||||||    
T  19263959 atatactccctccatcccataatataagcaaaaa 19263992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 190
Target Start/End: Original strand, 28599086 - 28599119
Alignment:
Q  157 atatactccctccatcccaaaatataagcaaaaa 190  Q
    ||||||||||||||||||||| ||||||||||||    
T  28599086 atatactccctccatcccaaattataagcaaaaa 28599119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 211 - 271
Target Start/End: Complemental strand, 4592507 - 4592447
Alignment:
Q  211 tatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatatt 271  Q
    |||||| |||||||||  || |||||||||||| |||||||||| | |||||| |||||||    
T  4592507 tatttgatacaaatttaaaatcaaatacattaatttttgttgacaattttttgtttatatt 4592447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 190
Target Start/End: Original strand, 16492888 - 16492924
Alignment:
Q  154 aatatatactccctccatcccaaaatataagcaaaaa 190  Q
    |||||||||||||||||||||| | ||||||||||||    
T  16492888 aatatatactccctccatcccatactataagcaaaaa 16492924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 223 - 275
Target Start/End: Complemental strand, 32614193 - 32614141
Alignment:
Q  223 atttttaaccaaatacattaacttttgttgaccaatttttgcttatattttgg 275  Q
    ||||| ||| |||||||||||||||| |||||||||||||  ||| |||||||    
T  32614193 attttgaacaaaatacattaacttttattgaccaatttttttttacattttgg 32614141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 104; Significance: 1e-51; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 160 - 287
Target Start/End: Complemental strand, 39030682 - 39030555
Alignment:
Q  160 tactccctccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatt 259  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  39030682 tactccctccatcccaaaatataagcaaaaattagtcaacaaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgaccaatt 39030583  T
Q  260 tttgcttatattttggggcggagtagta 287  Q
    |||||||||||||| |  ||||||||||    
T  39030582 tttgcttatattttagaacggagtagta 39030555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 160 - 281
Target Start/End: Original strand, 33669918 - 33670039
Alignment:
Q  160 tactccctccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatt 259  Q
    |||||| ||||||||||||| ||||||||||| |||||||  |||||| | ||| ||||||||||||| |||||||||||||||||||| ||||||||||    
T  33669918 tactccatccatcccaaaatgtaagcaaaaatgggtcaacataagttagtgtatctggtacaaattttaaaccaaatacattaactttttttgaccaatt 33670017  T
Q  260 tttgcttatattttggggcgga 281  Q
    |||||||| |||||||| ||||    
T  33670018 tttgcttacattttgggacgga 33670039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 175 - 276
Target Start/End: Original strand, 39030569 - 39030670
Alignment:
Q  175 aaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatattttg 274  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||  ||| |||  ||||||||||||||||||||||||| |||||||||||||||||||    
T  39030569 aaaatataagcaaaaattggtcaacaaaagttaatgtatttggttaaaaatttgtaccaaatacattaacttttgttgactaatttttgcttatattttg 39030668  T
Q  275 gg 276  Q
    ||    
T  39030669 gg 39030670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 154 - 282
Target Start/End: Complemental strand, 34252842 - 34252714
Alignment:
Q  154 aatatatactccctccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttga 253  Q
    |||| ||||||||||| ||||||||| ||||||||||| ||| |||  ||||| ||  || ||| | ||||||| |||||||||||||||||||||||||    
T  34252842 aatacatactccctccgtcccaaaatgtaagcaaaaatgggttaacataagttgatgaatgtggcataaattttgaaccaaatacattaacttttgttga 34252743  T
Q  254 ccaatttttgcttatattttggggcggag 282  Q
    |||||||||||||| |||||||| |||||    
T  34252742 ccaatttttgcttacattttgggacggag 34252714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 159 - 282
Target Start/End: Original strand, 34252707 - 34252830
Alignment:
Q  159 atactccctccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaat 258  Q
    ||||||||||| ||||||||| ||||||||||||||||||| ||||||||| |||||||| |||| |||   ||| || ||| ||||| |||| ||| ||    
T  34252707 atactccctccgtcccaaaatgtaagcaaaaattggtcaacaaaagttaatgtatttggttcaaaatttatgccacattcatcaacttatgttaacccat 34252806  T
Q  259 ttttgcttatattttggggcggag 282  Q
    ||||||||| |||||||| |||||    
T  34252807 ttttgcttacattttgggacggag 34252830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 159 - 276
Target Start/End: Complemental strand, 33670047 - 33669930
Alignment:
Q  159 atactccctccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaat 258  Q
    ||||||| ||| ||||||||| ||||||||||||||||||  ||||||||| ||||||||  ||| |||  |||| ||||| |||||| |||||||| ||    
T  33670047 atactccatccgtcccaaaatgtaagcaaaaattggtcaaaaaaagttaatgtatttggtttaaaatttgtaccagatacactaacttatgttgacccat 33669948  T
Q  259 ttttgcttatattttggg 276  Q
    ||||||||| ||||||||    
T  33669947 ttttgcttacattttggg 33669930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 160 - 276
Target Start/End: Original strand, 2424429 - 2424545
Alignment:
Q  160 tactccctccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatt 259  Q
    |||||||||| | | |||||||||||||||||| || |||  ||| | || ||| ||||||||||||| |||||||||||||||||||| | ||||||||    
T  2424429 tactccctccgtgctaaaatataagcaaaaatttgttaacataagctgatgtatatggtacaaattttgaaccaaatacattaacttttatcgaccaatt 2424528  T
Q  260 tttgcttatattttggg 276  Q
    |||| ||||| ||||||    
T  2424529 tttgtttataatttggg 2424545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 160 - 282
Target Start/End: Original strand, 9956489 - 9956611
Alignment:
Q  160 tactccctccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatt 259  Q
    |||||| ||||||||||||| |||| |||||| |||||||  | ||| || ||| || || ||||||| || |||||||||||||||||||| |||||||    
T  9956489 tactccatccatcccaaaatgtaagtaaaaatgggtcaacatatgttgatgtatctgttataaattttgaatcaaatacattaacttttgttaaccaatt 9956588  T
Q  260 tttgcttatattttggggcggag 282  Q
    ||| |||| |||||||| |||||    
T  9956589 tttacttacattttgggacggag 9956611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 175 - 273
Target Start/End: Complemental strand, 15119401 - 15119303
Alignment:
Q  175 aaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatatttt 273  Q
    ||||||||| ||||||||||| ||   ||||||||||||||  |||||||||| || |||||||||||| |||| ||||| ||||||||||||||||||    
T  15119401 aaaatataaacaaaaattggttaatataagttaatatatttaatacaaattttgaatcaaatacattaagttttattgactaatttttgcttatatttt 15119303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 156 - 273
Target Start/End: Complemental strand, 2424561 - 2424444
Alignment:
Q  156 tatatactccctccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgacc 255  Q
    ||||||||| |||||||||||| ||||| |||||||||||| |  ||||||||| |||||||| |||| |||  |||| |||||| | ||| |||| ||     
T  2424561 tatatactctctccatcccaaattataaacaaaaattggtcgataaaagttaatgtatttggttcaaaatttgtaccatatacatcagcttatgttaaca 2424462  T
Q  256 aatttttgcttatatttt 273  Q
    ||||||||||||||||||    
T  2424461 aatttttgcttatatttt 2424444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 180 - 273
Target Start/End: Original strand, 26835241 - 26835334
Alignment:
Q  180 ataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatatttt 273  Q
    ||||||||||||| | ||| | ||| | ||| ||||| |||||||||||||||||||| |||||||||||||||||| |||||| |||||||||    
T  26835241 ataagcaaaaattcgacaatgtaaggtgatagatttgatacaaatttttaaccaaatatattaacttttgttgaccactttttgtttatatttt 26835334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 174 - 273
Target Start/End: Original strand, 17555949 - 17556049
Alignment:
Q  174 caaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaac-ttttgttgaccaatttttgcttatattt 272  Q
    ||||||||||| ||||||  ||||||| ||||| ||||||||| || ||||||| ||||| |||||||||| ||||||| |||||||||| |||||||||    
T  17555949 caaaatataagtaaaaatgagtcaacgtaagttgatatatttgatataaattttgaaccacatacattaactttttgttcaccaatttttacttatattt 17556048  T
Q  273 t 273  Q
    |    
T  17556049 t 17556049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 211 - 274
Target Start/End: Original strand, 42324922 - 42324985
Alignment:
Q  211 tatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatattttg 274  Q
    ||||||||| ||||||| || ||||||||||||||||||||||||||||||| |||||||||||    
T  42324922 tatttggtataaattttaaaacaaatacattaacttttgttgaccaatttttacttatattttg 42324985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 211 - 275
Target Start/End: Complemental strand, 38958129 - 38958065
Alignment:
Q  211 tatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatattttgg 275  Q
    ||||||||||||| ||| ||||||||||||||||||||||| | |||||||| ||||||||||||    
T  38958129 tatttggtacaaaatttgaaccaaatacattaacttttgttaatcaatttttacttatattttgg 38958065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 186 - 273
Target Start/End: Complemental strand, 504215 - 504130
Alignment:
Q  186 aaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatatttt 273  Q
    |||| ||||||||| ||| ||||| |||||| |||||||| | |||||||||  |||| ||||||||||| |||||||||||||||||    
T  504215 aaaagttggtcaacaaaaattaatgtatttgatacaaattctgaaccaaata--ttaatttttgttgaccgatttttgcttatatttt 504130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 160 - 256
Target Start/End: Original strand, 38958052 - 38958148
Alignment:
Q  160 tactccctccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgacca 256  Q
    |||| ||||| | |||||||||||| |||||||| | ||| ||||||||| |||||||| ||||||||  ||||||||||| ||||  |||||||||    
T  38958052 tacttcctccgttccaaaatataagtaaaaattgattaacaaaagttaatgtatttggttcaaattttgtaccaaatacatcaactcatgttgacca 38958148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 212 - 262
Target Start/End: Original strand, 26730097 - 26730147
Alignment:
Q  212 atttggtacaaatttttaaccaaatacattaacttttgttgaccaattttt 262  Q
    ||||| ||||||||||||| |||||||||||||||||||| ||||||||||    
T  26730097 atttgatacaaatttttaatcaaatacattaacttttgttaaccaattttt 26730147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 212 - 273
Target Start/End: Original strand, 26746239 - 26746299
Alignment:
Q  212 atttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatatttt 273  Q
    ||||| |||||||||||||| ||||| |||||| |||||||| |||||||||||||||||||    
T  26746239 atttgatacaaatttttaactaaataaattaac-tttgttgatcaatttttgcttatatttt 26746299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 202 - 287
Target Start/End: Complemental strand, 33498438 - 33498353
Alignment:
Q  202 aagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatattttggggcggagtagta 287  Q
    ||||| || ||||| ||||||||||| ||||||||| ||| | |||||||| |||| ||||||||||||||| || ||||| ||||    
T  33498438 aagttgatgtattttgtacaaattttgaaccaaatatattgatttttgttggccaacttttgcttatattttaggacggaggagta 33498353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 202 - 274
Target Start/End: Original strand, 968315 - 968387
Alignment:
Q  202 aagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatattttg 274  Q
    ||||| || ||||||||||||||||| ||| ||||| ||||| ||||||||||  |||||| |||||||||||    
T  968315 aagttgatgtatttggtacaaattttgaactaaatatattaatttttgttgactcatttttacttatattttg 968387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 213 - 273
Target Start/End: Complemental strand, 42708648 - 42708588
Alignment:
Q  213 tttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatatttt 273  Q
    ||||||| ||||||| ||| |||||||||||||||||||||  ||||||||| ||||||||    
T  42708648 tttggtataaattttcaactaaatacattaacttttgttgattaatttttgcgtatatttt 42708588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 175 - 262
Target Start/End: Complemental strand, 2884132 - 2884046
Alignment:
Q  175 aaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaattttt 262  Q
    |||||||||| |||||||||||||  ||| ||||| |||||  |||||||||| || |||||||||||| |||| |||| ||||||||    
T  2884132 aaaatataagtaaaaattggtcaataaaatttaatgtatttaatacaaattttaaatcaaatacattaa-ttttattgatcaattttt 2884046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 175 - 282
Target Start/End: Original strand, 14646368 - 14646475
Alignment:
Q  175 aaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatattttg 274  Q
    |||||||||| ||||||  |||||   || ||||| ||||| ||||||||||| || || ||||||||| |||| || | ||||||| ||||||||||||    
T  14646368 aaaatataagtaaaaataagtcaatataaattaatgtatttagtacaaattttgaatcatatacattaatttttatttatcaattttcgcttatattttg 14646467  T
Q  275 gggcggag 282  Q
    || |||||    
T  14646468 ggacggag 14646475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 273
Target Start/End: Complemental strand, 30293481 - 30293382
Alignment:
Q  174 caaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatatttt 273  Q
    ||||||||||| ||||||  ||||||  | ||| || |||||| || ||||||| || |||||||||| ||||||||||| ||| |||| ||||||||||    
T  30293481 caaaatataagtaaaaatgagtcaacatatgttgatgtatttgatataaattttgaatcaaatacattgacttttgttgatcaaattttacttatatttt 30293382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 261
Target Start/End: Complemental strand, 42324985 - 42324898
Alignment:
Q  174 caaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttt 261  Q
    ||||||||||| |||||||||||||| ||||||||| |||||| |  ||| |||  ||||||||||| || || | ||||||||||||    
T  42324985 caaaatataagtaaaaattggtcaacaaaagttaatgtatttgttttaaaatttataccaaatacatcaatttatattgaccaatttt 42324898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 175 - 260
Target Start/End: Complemental strand, 8802877 - 8802791
Alignment:
Q  175 aaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaa-ccaaatacattaacttttgttgaccaattt 260  Q
    |||||||||| ||||||| ||||| ||||||| ||||||||| | |||| |||||  |||||||||||||||||  |||||| ||||    
T  8802877 aaaatataagaaaaaatttgtcaaagaaagttgatatatttgatccaaaattttaggccaaatacattaactttctttgacccattt 8802791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 211 - 273
Target Start/End: Original strand, 20185355 - 20185416
Alignment:
Q  211 tatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatatttt 273  Q
    ||||| ||||||||||| ||||||||||||||| ||||||| ||||||||| ||||| |||||    
T  20185355 tattttgtacaaattttgaaccaaatacattaa-ttttgttaaccaattttagcttacatttt 20185416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 160 - 246
Target Start/End: Complemental strand, 37040221 - 37040136
Alignment:
Q  160 tactccctccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaactt 246  Q
    |||||||||||||| |||||||||| |||||| ||| |||  ||||| || |||  |||||||||||| || |||||||||||||||    
T  37040221 tactccctccatcctaaaatataagtaaaaatgggt-aacataagttgatgtatgaggtacaaattttaaatcaaatacattaactt 37040136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 155 - 262
Target Start/End: Original strand, 504110 - 504215
Alignment:
Q  155 atatatactccctccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgac 254  Q
    ||||||||||| ||| |   ||||||||||||||||| ||||||| ||| |||  ||||||||| || | |||  | |||||||||||| ||||||||||    
T  504110 atatatactccttccgttttaaaatataagcaaaaatcggtcaacaaaaatta--atatttggttcagaatttgtatcaaatacattaatttttgttgac 504207  T
Q  255 caattttt 262  Q
    ||| ||||    
T  504208 caactttt 504215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 202 - 281
Target Start/End: Complemental strand, 5727792 - 5727714
Alignment:
Q  202 aagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatattttggggcgga 281  Q
    ||||| || ||| ||||||||||||| |||||| || ||||| |||| ||||||||||||| |||| |||||||| ||||    
T  5727792 aagttgatgtatctggtacaaattttaaaccaa-tatattaatttttattgaccaatttttacttacattttgggacgga 5727714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 221 - 272
Target Start/End: Complemental strand, 16500615 - 16500564
Alignment:
Q  221 aaatttttaaccaaatacattaacttttgttgaccaatttttgcttatattt 272  Q
    ||||||| |||||| |||||||| ||||||||| ||||||||||||| ||||    
T  16500615 aaattttgaaccaattacattaatttttgttgaacaatttttgcttacattt 16500564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 202 - 261
Target Start/End: Complemental strand, 20219573 - 20219514
Alignment:
Q  202 aagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttt 261  Q
    ||||| |||||||||| | ||||||| || |||||| ||||||||||||||| |||||||    
T  20219573 aagttgatatatttggcataaattttgaatcaaatatattaacttttgttgatcaatttt 20219514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 175 - 218
Target Start/End: Complemental strand, 26835334 - 26835291
Alignment:
Q  175 aaaatataagcaaaaattggtcaacgaaagttaatatatttggt 218  Q
    ||||||||| |||||| |||||||| ||||||||||||||||||    
T  26835334 aaaatataaacaaaaagtggtcaacaaaagttaatatatttggt 26835291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 202 - 253
Target Start/End: Original strand, 28023956 - 28024007
Alignment:
Q  202 aagttaatatatttggtacaaatttttaaccaaatacattaacttttgttga 253  Q
    |||||||| ||||| ||||||||||| || ||||||||||||||||| ||||    
T  28023956 aagttaatgtattttgtacaaattttgaatcaaatacattaacttttattga 28024007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 229 - 276
Target Start/End: Original strand, 29960470 - 29960517
Alignment:
Q  229 aaccaaatacattaacttttgttgaccaatttttgcttatattttggg 276  Q
    |||||||||||||||||||||||| | |||||||| ||| ||||||||    
T  29960470 aaccaaatacattaacttttgttgtctaatttttgtttacattttggg 29960517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 261
Target Start/End: Complemental strand, 11507922 - 11507888
Alignment:
Q  227 ttaaccaaatacattaacttttgttgaccaatttt 261  Q
    ||||||| |||||||||||||||||||||||||||    
T  11507922 ttaaccagatacattaacttttgttgaccaatttt 11507888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 261
Target Start/End: Complemental strand, 11515293 - 11515259
Alignment:
Q  227 ttaaccaaatacattaacttttgttgaccaatttt 261  Q
    ||||||| |||||||||||||||||||||||||||    
T  11515293 ttaaccagatacattaacttttgttgaccaatttt 11515259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 261
Target Start/End: Complemental strand, 11522695 - 11522661
Alignment:
Q  227 ttaaccaaatacattaacttttgttgaccaatttt 261  Q
    ||||||| |||||||||||||||||||||||||||    
T  11522695 ttaaccagatacattaacttttgttgaccaatttt 11522661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 261
Target Start/End: Complemental strand, 11530107 - 11530073
Alignment:
Q  227 ttaaccaaatacattaacttttgttgaccaatttt 261  Q
    ||||||| |||||||||||||||||||||||||||    
T  11530107 ttaaccagatacattaacttttgttgaccaatttt 11530073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 273
Target Start/End: Original strand, 15119303 - 15119401
Alignment:
Q  175 aaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatatttt 273  Q
    |||||||||||||||||| |||||  ||| ||||| |||||| | |||| |||  |  ||||| |||||||| | || ||||||||||| |||||||||    
T  15119303 aaaatataagcaaaaattagtcaataaaacttaatgtatttgattcaaaatttgtattaaatatattaacttatattaaccaatttttgtttatatttt 15119401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 251
Target Start/End: Original strand, 33498357 - 33498443
Alignment:
Q  165 cctccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgtt 251  Q
    ||||| ||| ||||||||||||||| |||| |||| ||| | |||||||||||| |||| |||  || |||||||| ||||| ||||    
T  33498357 cctccgtcctaaaatataagcaaaagttggccaacaaaaatcaatatatttggttcaaaatttgtacaaaatacatcaacttatgtt 33498443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 160 - 218
Target Start/End: Complemental strand, 36858081 - 36858023
Alignment:
Q  160 tactccctccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggt 218  Q
    |||||| ||| ||||||||| ||||||||||||||| |   ||||||||||||||||||    
T  36858081 tactccatccgtcccaaaatgtaagcaaaaattggttagtaaaagttaatatatttggt 36858023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 274
Target Start/End: Complemental strand, 36058869 - 36058764
Alignment:
Q  169 catcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttat 268  Q
    ||||| ||||||||||||||||  | ||||   || || ||||||||  |||||||||| || || ||||||||| |||  ||||| |||||||| ||||    
T  36058869 catcctaaaatataagcaaaaacggatcaatataaattgatatattttatacaaattttaaatcatatacattaattttaattgacaaatttttgtttat 36058770  T
Q  269 attttg 274  Q
    ||||||    
T  36058769 attttg 36058764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 229 - 274
Target Start/End: Complemental strand, 40898535 - 40898490
Alignment:
Q  229 aaccaaatacattaacttttgttgaccaatttttgcttatattttg 274  Q
    ||||||||||| ||| |||| |||||||||||||| ||||||||||    
T  40898535 aaccaaatacaataatttttattgaccaatttttgattatattttg 40898490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 968387 - 968315
Alignment:
Q  174 caaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaactt 246  Q
    ||||||||||| ||||||  |||||| ||| ||||||||||| || |||| |||  ||||||||||| |||||    
T  968387 caaaatataagtaaaaatgagtcaacaaaaattaatatatttagttcaaaatttgtaccaaatacatcaactt 968315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 233 - 273
Target Start/End: Original strand, 2884092 - 2884132
Alignment:
Q  233 aaatacattaacttttgttgaccaatttttgcttatatttt 273  Q
    ||||||||||| |||| ||||||||||||| ||||||||||    
T  2884092 aaatacattaaattttattgaccaatttttacttatatttt 2884132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 281
Target Start/End: Complemental strand, 4576941 - 4576877
Alignment:
Q  217 gtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatattttggggcgga 281  Q
    ||||| ||||| ||||  |||||||||||| ||| ||| ||| ||||||||||||||||| ||||    
T  4576941 gtacagattttgaaccgcatacattaacttctgtcgacaaatatttgcttatattttgggacgga 4576877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 177 - 229
Target Start/End: Complemental strand, 10895514 - 10895462
Alignment:
Q  177 aatataagcaaaaattggtcaacgaaagttaatatatttggtacaaattttta 229  Q
    ||||||| ||||| |||||||| ||||||| ||||||||||| |||| |||||    
T  10895514 aatataatcaaaagttggtcaatgaaagttgatatatttggtccaaaatttta 10895462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 160 - 276
Target Start/End: Original strand, 25467097 - 25467213
Alignment:
Q  160 tactccctccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatt 259  Q
    ||||| |||| || |||||| ||||||||||| | | |||  ||||| || |||  | || ||||||| ||||| |||||||||||||| | || |||||    
T  25467097 tactctctccgtctcaaaatgtaagcaaaaatggattaacataagttgatgtatccgatataaattttgaaccacatacattaacttttatcgatcaatt 25467196  T
Q  260 tttgcttatattttggg 276  Q
    ||| |||| ||||||||    
T  25467197 tttccttagattttggg 25467213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 229 - 281
Target Start/End: Original strand, 36858022 - 36858074
Alignment:
Q  229 aaccaaatacattaacttttgttgaccaatttttgcttatattttggggcgga 281  Q
    ||||||||| ||||||||||  | ||||||||||||||| |||||||| ||||    
T  36858022 aaccaaatatattaacttttactaaccaatttttgcttacattttgggacgga 36858074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 233 - 273
Target Start/End: Complemental strand, 37040120 - 37040080
Alignment:
Q  233 aaatacattaacttttgttgaccaatttttgcttatatttt 273  Q
    |||||||||||||| |||||||||||||||| ||| |||||    
T  37040120 aaatacattaacttctgttgaccaatttttgtttacatttt 37040080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 91; Significance: 6e-44; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 159 - 269
Target Start/End: Original strand, 16866391 - 16866501
Alignment:
Q  159 atactccctccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaat 258  Q
    ||||||||||||||||||||||||||||||||||| ||||  ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  16866391 atactccctccatcccaaaatataagcaaaaattgatcaataaaagttaatgtattaggtacaaatttttaaccaaatacattaacttttgttgaccaat 16866490  T
Q  259 ttttgcttata 269  Q
    |||||||||||    
T  16866491 ttttgcttata 16866501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 158 - 274
Target Start/End: Original strand, 3719866 - 3719982
Alignment:
Q  158 tatactccctccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaa 257  Q
    ||||||| ||||||||||||||||| | |||||||||||||| ||||||| | |||||||| ||||||||| || | |||||| ||||| |||||| |||    
T  3719866 tatactcactccatcccaaaatatatgtaaaaattggtcaactaaagttagtgtatttggttcaaattttttacgagatacatcaacttatgttgatcaa 3719965  T
Q  258 tttttgcttatattttg 274  Q
    |||||||||| ||||||    
T  3719966 tttttgcttacattttg 3719982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 179 - 276
Target Start/End: Complemental strand, 16866501 - 16866404
Alignment:
Q  179 tataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatattttggg 276  Q
    ||||||||||||||||||||| ||||||||| ||||||||  ||| |||  ||| ||||||||||||||| |||| ||||||||||||||||||||||    
T  16866501 tataagcaaaaattggtcaacaaaagttaatgtatttggttaaaaatttgtacctaatacattaacttttattgatcaatttttgcttatattttggg 16866404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 211 - 276
Target Start/End: Complemental strand, 6803375 - 6803310
Alignment:
Q  211 tatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatattttggg 276  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  6803375 tatttggtacaaattttaaactaaatacattaacttttgttgaccaaattttgcttatattttggg 6803310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 160 - 276
Target Start/End: Complemental strand, 5026256 - 5026143
Alignment:
Q  160 tactccctccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatt 259  Q
    ||||||||||||| ||||||||||| |||||   ||||    ||||| || |||||||||||||||||  || ||||| ||||||||||||| |||||||    
T  5026256 tactccctccatctcaaaatataagtaaaaacgagtcat---aagttgatgtatttggtacaaattttggactaaatatattaacttttgttaaccaatt 5026160  T
Q  260 tttgcttatattttggg 276  Q
    |||||||||||||||||    
T  5026159 tttgcttatattttggg 5026143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 171 - 262
Target Start/End: Original strand, 18731992 - 18732083
Alignment:
Q  171 tcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaattttt 262  Q
    ||||||||||||||||||||| | |||||  || || || ||| ||||| ||||||| |||||||||||||||||||| |||||||||||||    
T  18731992 tcccaaaatataagcaaaaatggatcaacataaattgatgtatctggtataaattttgaaccaaatacattaacttttattgaccaattttt 18732083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 211 - 274
Target Start/End: Complemental strand, 44816535 - 44816472
Alignment:
Q  211 tatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatattttg 274  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||| ||||||    
T  44816535 tatttggtacaaattttgaaccaaatacattaacttttgttggccaatttttgtttacattttg 44816472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 171 - 246
Target Start/End: Original strand, 5026142 - 5026217
Alignment:
Q  171 tcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaactt 246  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||| || |||| |||  ||||||||||| |||||    
T  5026142 tcccaaaatataagcaaaaattggttaacaaaagttaatatatttagtccaaaatttgtaccaaatacatcaactt 5026217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 174 - 276
Target Start/End: Complemental strand, 3719982 - 3719880
Alignment:
Q  174 caaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatatttt 273  Q
    |||||| ||||||||||||| |||||  ||||| || ||| | ||| ||| ||| ||||||||||| ||||||| |||||||||||||| | ||||||||    
T  3719982 caaaatgtaagcaaaaattgatcaacataagttgatgtatctcgtaaaaaatttgaaccaaatacactaactttagttgaccaatttttacatatatttt 3719883  T
Q  274 ggg 276  Q
    |||    
T  3719882 ggg 3719880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 202 - 281
Target Start/End: Complemental strand, 47967990 - 47967911
Alignment:
Q  202 aagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatattttggggcgga 281  Q
    |||||||| ||||| ||||||||||| ||| |||||||| || ||||||||||| | ||||| |||||||||||| ||||    
T  47967990 aagttaatgtatttagtacaaattttaaactaaatacataaatttttgttgaccgaattttgtttatattttgggacgga 47967911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 186 - 276
Target Start/End: Complemental strand, 18732083 - 18731993
Alignment:
Q  186 aaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatattttggg 276  Q
    |||||||||||||  ||||||||| |||||||| |||| |||  |||| |||||| || || |||||| | ||||||||||||||||||||    
T  18732083 aaaaattggtcaataaaagttaatgtatttggttcaaaatttataccagatacatcaatttatgttgatccatttttgcttatattttggg 18731993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 175 - 273
Target Start/End: Original strand, 23971191 - 23971288
Alignment:
Q  175 aaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatatttt 273  Q
    |||||||||||||||||   ||||   ||||| || ||||||||||||||||| ||| ||||| ||| | |||||||||||||||||| ||||||||||    
T  23971191 aaaatataagcaaaaataaatcaatataagttgatgtatttggtacaaattttgaactaaatatatttatttttgttgaccaattttt-cttatatttt 23971288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 211 - 273
Target Start/End: Complemental strand, 30794509 - 30794447
Alignment:
Q  211 tatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatatttt 273  Q
    ||||||||||||||||| || |||||| ||||| ||||||||||||| |||| ||||||||||    
T  30794509 tatttggtacaaattttgaatcaaatatattaaattttgttgaccaaattttacttatatttt 30794447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 273
Target Start/End: Complemental strand, 14773576 - 14773476
Alignment:
Q  174 caaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaac-ttttgttgaccaatttttgcttatattt 272  Q
    ||||||||||| ||||||  ||||||| ||||| || ||| || || ||||||| ||||| |||||||||| ||||||| |||||||||| |||| ||||    
T  14773576 caaaatataagtaaaaatgagtcaacgtaagttgatgtatctgatataaattttgaaccacatacattaactttttgttcaccaatttttacttacattt 14773477  T
Q  273 t 273  Q
    |    
T  14773476 t 14773476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 273
Target Start/End: Complemental strand, 15224028 - 15223928
Alignment:
Q  174 caaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaac-ttttgttgaccaatttttgcttatattt 272  Q
    ||||||||||| ||||||  ||||||| ||||| || ||| || || ||||||| ||||| |||||||||| ||||||| |||||||||| |||| ||||    
T  15224028 caaaatataagtaaaaatgagtcaacgtaagttgatgtatctgatataaattttgaaccacatacattaactttttgttcaccaatttttacttacattt 15223929  T
Q  273 t 273  Q
    |    
T  15223928 t 15223928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 208 - 282
Target Start/End: Original strand, 1554874 - 1554948
Alignment:
Q  208 atatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatattttggggcggag 282  Q
    |||||| | ||||||||||| ||| |||||| | ||||||| |||||||||||||| ||||||||| || |||||    
T  1554874 atatatctagtacaaattttaaacaaaatacgtgaacttttattgaccaatttttgtttatattttaggacggag 1554948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 175 - 273
Target Start/End: Complemental strand, 23971288 - 23971191
Alignment:
Q  175 aaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatatttt 273  Q
    |||||||||| |||||||||||||| ||| | ||||||||| || |||| |||  ||||||||||| ||||| | ||||   |||||||||||||||||    
T  23971288 aaaatataag-aaaaattggtcaacaaaaataaatatatttagttcaaaatttgtaccaaatacatcaacttatattgatttatttttgcttatatttt 23971191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 232 - 273
Target Start/End: Complemental strand, 27147644 - 27147603
Alignment:
Q  232 caaatacattaacttttgttgaccaatttttgcttatatttt 273  Q
    ||||||||||||||||||||||| ||||||| ||||||||||    
T  27147644 caaatacattaacttttgttgactaatttttacttatatttt 27147603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 158 - 274
Target Start/End: Original strand, 3769742 - 3769858
Alignment:
Q  158 tatactccctccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaa 257  Q
    |||||||| ||| | |||||||  ||| ||||||  ||||||  ||||| || |||||  |||||||||| ||| ||||||||||||||||||  | |||    
T  3769742 tatactccatccgttccaaaatgcaagtaaaaatgagtcaacacaagttgatgtatttaatacaaattttaaactaaatacattaacttttgtatatcaa 3769841  T
Q  258 tttttgcttatattttg 274  Q
    |||||  ||||||||||    
T  3769842 tttttatttatattttg 3769858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 176 - 271
Target Start/End: Original strand, 4259313 - 4259408
Alignment:
Q  176 aaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgtt-gaccaatttttgcttatatt 271  Q
    ||||||| || |||||  ||||||  |||||||| |||||  || ||||||| ||| ||||||||||||||||||| || |||||||||||||||||    
T  4259313 aaatatacgcgaaaatgagtcaacataagttaatgtatttactataaattttgaac-aaatacattaacttttgttagatcaatttttgcttatatt 4259408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 171 - 215
Target Start/End: Original strand, 6803309 - 6803353
Alignment:
Q  171 tcccaaaatataagcaaaaattggtcaacgaaagttaatatattt 215  Q
    ||||||||||||||||||| ||||||||| ||||||||| |||||    
T  6803309 tcccaaaatataagcaaaatttggtcaacaaaagttaatgtattt 6803353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 170 - 261
Target Start/End: Original strand, 30794442 - 30794534
Alignment:
Q  170 atcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttga-ccaatttt 261  Q
    |||| |||||||||| |||| ||||||||| ||| |||||||||||| | |||| |||  |||||||||||| | || |||||| ||||||||    
T  30794442 atcctaaaatataagtaaaatttggtcaacaaaatttaatatatttgattcaaaatttgtaccaaatacattcatttatgttgatccaatttt 30794534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 219 - 267
Target Start/End: Original strand, 34515855 - 34515903
Alignment:
Q  219 acaaatttttaaccaaatacattaacttttgttgaccaatttttgctta 267  Q
    ||||||||| ||| |||||||||||||||| |||||||| |||||||||    
T  34515855 acaaattttgaacaaaatacattaacttttattgaccaaattttgctta 34515903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 169 - 240
Target Start/End: Original strand, 44816467 - 44816538
Alignment:
Q  169 catcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacat 240  Q
    |||| |||||| ||| |||||||||| |||| ||||||||| |||||||| |||| |||  |||||||||||    
T  44816467 catctcaaaatgtaaacaaaaattggccaacaaaagttaatgtatttggttcaaaatttgtaccaaatacat 44816538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 159 - 191
Target Start/End: Original strand, 13591028 - 13591060
Alignment:
Q  159 atactccctccatcccaaaatataagcaaaaat 191  Q
    ||||||||||| |||||||||||||||||||||    
T  13591028 atactccctccgtcccaaaatataagcaaaaat 13591060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 69; Significance: 9e-31; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 160 - 276
Target Start/End: Complemental strand, 31323933 - 31323817
Alignment:
Q  160 tactccctccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatt 259  Q
    |||||||||  ||||||||| ||||||||||| |||||||  ||||| || ||| ||||||||||||| ||| |||||||||||||||||||||||||||    
T  31323933 tactccctctgtcccaaaatgtaagcaaaaataggtcaacataagttgatgtatctggtacaaattttgaacaaaatacattaacttttgttgaccaatt 31323834  T
Q  260 tttgcttatattttggg 276  Q
    |||||||| ||||||||    
T  31323833 tttgcttacattttggg 31323817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 160 - 276
Target Start/End: Original strand, 28004614 - 28004730
Alignment:
Q  160 tactccctccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatt 259  Q
    |||||||||| | ||||| |||||||| || |||| |||| ||| ||||| ||||||||||||||||| | |||||||||||||||||||||||| ||||    
T  28004614 tactccctccgttccaaagtataagcataatttggccaacaaaaattaatgtatttggtacaaattttgagccaaatacattaacttttgttgactaatt 28004713  T
Q  260 tttgcttatattttggg 276  Q
    ||  |||||||||||||    
T  28004714 ttcccttatattttggg 28004730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 157 - 276
Target Start/End: Complemental strand, 14446818 - 14446699
Alignment:
Q  157 atatactccctccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgacca 256  Q
    ||||||||||||| ||||||||| |||| ||||||||||||| | ||||| || ||| |  || ||||||| ||| | ||||||||||||||||||||||    
T  14446818 atatactccctccgtcccaaaatgtaagtaaaaattggtcaatgtaagttgatgtatctaatataaattttgaacaacatacattaacttttgttgacca 14446719  T
Q  257 atttttgcttatattttggg 276  Q
    | ||||||||| ||||||||    
T  14446718 acttttgcttacattttggg 14446699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 160 - 277
Target Start/End: Complemental strand, 30531297 - 30531180
Alignment:
Q  160 tactccctccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatt 259  Q
    |||||||||| ||||||||| |||||||||||   |||||  ||||| || ||||||||||||| ||| |||||||||||| ||||| ||||||||  ||    
T  30531297 tactccctccgtcccaaaatgtaagcaaaaatgactcaacataagttgatgtatttggtacaaactttgaaccaaatacatcaacttatgttgacccgtt 30531198  T
Q  260 tttgcttatattttgggg 277  Q
    |||||||| |||||||||    
T  30531197 tttgcttacattttgggg 30531180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 159 - 276
Target Start/End: Original strand, 31323804 - 31323921
Alignment:
Q  159 atactccctccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaat 258  Q
    ||||||||||   |||||||| ||||||||||||||||||| ||||||||| ||||| || |||| |||  |||| |||||| ||||| |||||||| ||    
T  31323804 atactccctctgacccaaaatgtaagcaaaaattggtcaacaaaagttaatgtattttgttcaaaatttgtaccagatacatcaacttatgttgacctat 31323903  T
Q  259 ttttgcttatattttggg 276  Q
    ||||||||| ||||||||    
T  31323904 ttttgcttacattttggg 31323921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 159 - 275
Target Start/End: Complemental strand, 28004743 - 28004627
Alignment:
Q  159 atactccctccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaat 258  Q
    ||||||| ||||||||||||||||||  |||||| |||||| ||||||||| |||||||  |||| |||  |||||||||||||| |||||||| ||||     
T  28004743 atactccttccatcccaaaatataagggaaaattagtcaacaaaagttaatgtatttggctcaaaatttgtaccaaatacattaatttttgttggccaaa 28004644  T
Q  259 ttttgcttatattttgg 275  Q
    || |||||||| |||||    
T  28004643 ttatgcttatactttgg 28004627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 156 - 262
Target Start/End: Complemental strand, 2282521 - 2282415
Alignment:
Q  156 tatatactccctccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgacc 255  Q
    |||||||| ||||| |||||| ||||||||||||||| || |||  || || || |||||| ||||| |||| ||| |||||||||||||||||||||||    
T  2282521 tatatacttcctccgtcccaatatataagcaaaaattagttaacataaattgatgtatttgatacaatttttgaactaaatacattaacttttgttgacc 2282422  T
Q  256 aattttt 262  Q
    |||||||    
T  2282421 aattttt 2282415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 157 - 273
Target Start/End: Complemental strand, 35003881 - 35003765
Alignment:
Q  157 atatactccctccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgacca 256  Q
    ||||||||| ||| ||  ||||| |||||||||||   |||||  ||||| |||||||| ||||||||||| || |||||||||||| |||| || ||||    
T  35003881 atatactccatccgtcttaaaatgtaagcaaaaatgaatcaacataagttgatatattttgtacaaattttgaatcaaatacattaatttttattaacca 35003782  T
Q  257 atttttgcttatatttt 273  Q
    |||||| ||||||||||    
T  35003781 atttttacttatatttt 35003765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 158 - 273
Target Start/End: Complemental strand, 1986325 - 1986210
Alignment:
Q  158 tatactccctccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaa 257  Q
    |||||||||| | ||| ||||| |||  ||||||  ||||||  |||||||||||||||||| ||||||| ||| |||| |||||| |||| ||||||||    
T  1986325 tatactccctacgtcctaaaatgtaaataaaaatcagtcaacataagttaatatatttggtataaattttaaactaaatgcattaatttttattgaccaa 1986226  T
Q  258 tttttgcttatatttt 273  Q
     |||| ||||||||||    
T  1986225 cttttacttatatttt 1986210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 211 - 272
Target Start/End: Complemental strand, 9829959 - 9829898
Alignment:
Q  211 tatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatattt 272  Q
    ||||||||||||||||| ||| ||||||||||| |||||||||| ||||||| |||||||||    
T  9829959 tatttggtacaaattttaaacaaaatacattaatttttgttgactaatttttacttatattt 9829898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 153 - 218
Target Start/End: Original strand, 28756641 - 28756706
Alignment:
Q  153 taatatatactccctccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggt 218  Q
    ||||| ||||| | ||||||| ||||||||||||||| ||||||||||||||||||| ||||||||    
T  28756641 taataaatactacttccatccaaaaatataagcaaaatttggtcaacgaaagttaatgtatttggt 28756706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 156 - 282
Target Start/End: Original strand, 30531168 - 30531291
Alignment:
Q  156 tatatactccctccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgacc 255  Q
    ||||||||||||||   ||||||| ||||||||||  |||||||  ||||| || |||||||| |||| |||  ||||||||||| ||||| ||||||      
T  30531168 tatatactccctcc---ccaaaatgtaagcaaaaacgggtcaacataagttgatgtatttggttcaaagtttgtaccaaatacatcaacttatgttgagt 30531264  T
Q  256 aatttttgcttatattttggggcggag 282  Q
     ||||||||||| |||||||| |||||    
T  30531265 catttttgcttacattttgggacggag 30531291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 211 - 274
Target Start/End: Original strand, 8437816 - 8437879
Alignment:
Q  211 tatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatattttg 274  Q
    ||||||||||||||||| || |||||||||||| |||||||||| || |||| |||||||||||    
T  8437816 tatttggtacaaattttgaatcaaatacattaatttttgttgactaaattttacttatattttg 8437879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 228 - 273
Target Start/End: Complemental strand, 28756708 - 28756663
Alignment:
Q  228 taaccaaatacattaacttttgttgaccaatttttgcttatatttt 273  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||    
T  28756708 taaccaaatacattaactttcgttgaccaaattttgcttatatttt 28756663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 31522654 - 31522714
Alignment:
Q  215 tggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatattttggg 276  Q
    ||||||||||||| || ||||| |||||||||||||||||||| ||||||||| ||||||||    
T  31522654 tggtacaaattttgaatcaaatgcattaacttttgttgaccaa-ttttgcttacattttggg 31522714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 160 - 246
Target Start/End: Original strand, 9675753 - 9675839
Alignment:
Q  160 tactccctccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaactt 246  Q
    |||||||||| || |||||| |||||||||||||||||||  ||||| ||  || |||||||||||||  |  ||||||||||||||    
T  9675753 tactccctccgtctcaaaatgtaagcaaaaattggtcaacataagttgatgcatctggtacaaattttgtattaaatacattaactt 9675839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 282
Target Start/End: Original strand, 14446679 - 14446809
Alignment:
Q  152 ataatatatactccctccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgtt 251  Q
    |||| |||||||||||   ||||||||| ||||||||| ||||||||| ||||||||| ||| | || |||| |||  |  | |||||| |||||   ||    
T  14446679 ataagatatactccctttgtcccaaaatgtaagcaaaagttggtcaacaaaagttaatgtatgttgttcaaaatttatattagatacatcaacttacatt 14446778  T
Q  252 gaccaatttttgcttatattttggggcggag 282  Q
    ||||||||||| |||| |||||||| |||||    
T  14446779 gaccaatttttacttacattttgggacggag 14446809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 173 - 273
Target Start/End: Complemental strand, 7549890 - 7549781
Alignment:
Q  173 ccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatt---------tttaaccaaatacattaacttttgttgaccaatttttg 263  Q
    |||||||||||||||||||||||  || |||||||||||||||| | |  |||         || || |||||||||||||||||||  |||||||||||    
T  7549890 ccaaaatataagcaaaaattggtgtacaaaagttaatatatttgattcgtatttggttcaaattgaatcaaatacattaacttttgtacaccaatttttg 7549791  T
Q  264 cttatatttt 273  Q
    ||||||||||    
T  7549790 cttatatttt 7549781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 159 - 240
Target Start/End: Complemental strand, 13320930 - 13320849
Alignment:
Q  159 atactccctccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacat 240  Q
    |||||||||||||  |||||||||||||| |||  ||||||||||||| || ||| ||||  |||||||  |||||||||||    
T  13320930 atactccctccataacaaaatataagcaacaatgagtcaacgaaagttgatgtatctggtctaaattttacaccaaatacat 13320849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 186 - 282
Target Start/End: Original strand, 2282415 - 2282511
Alignment:
Q  186 aaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatattttggggcggag 282  Q
    |||||||||||||| ||||||||| ||||| || ||||  ||  | ||||||||| || || |||| || ||||||||||||||| ||||| |||||    
T  2282415 aaaaattggtcaacaaaagttaatgtatttagttcaaaaattgtatcaaatacatcaatttatgttaactaatttttgcttatatattgggacggag 2282511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 205 - 273
Target Start/End: Complemental strand, 13422206 - 13422138
Alignment:
Q  205 ttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatatttt 273  Q
    ||||||||| ||||| ||||||| || |||||||||||| |||| |||| |||||||| |||| |||||    
T  13422206 ttaatatatctggtataaattttaaatcaaatacattaatttttattgagcaatttttacttacatttt 13422138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 211 - 282
Target Start/End: Original strand, 7343284 - 7343354
Alignment:
Q  211 tatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatattttggggcggag 282  Q
    |||||||||||| |||| ||  ||||| ||||||||||||||| |||||||| |||||||||| || |||||    
T  7343284 tatttggtacaa-ttttgaaataaatatattaacttttgttgatcaatttttacttatattttaggacggag 7343354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 275
Target Start/End: Original strand, 7549847 - 7549890
Alignment:
Q  232 caaatacattaacttttgttgaccaatttttgcttatattttgg 275  Q
    |||||| ||||||||||||  |||||||||||||||||||||||    
T  7549847 caaatatattaacttttgtacaccaatttttgcttatattttgg 7549890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 8215281 - 8215222
Alignment:
Q  203 agttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaattttt 262  Q
    ||||||| |||||| |||||||||   ||||||||||||||| |||||||| ||||||||    
T  8215281 agttaatgtatttgatacaaatttcagaccaaatacattaacatttgttgatcaattttt 8215222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 274
Target Start/End: Complemental strand, 28596131 - 28596080
Alignment:
Q  223 atttttaaccaaatacattaacttttgttgaccaatttttgcttatattttg 274  Q
    ||||| ||||||||| ||||| |||||||||||||||||| |||| ||||||    
T  28596131 attttgaaccaaatatattaatttttgttgaccaatttttacttacattttg 28596080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 161 - 215
Target Start/End: Complemental strand, 7343359 - 7343305
Alignment:
Q  161 actccctccatcccaaaatataagcaaaaattggtcaacgaaagttaatatattt 215  Q
    |||| |||| ||| |||||||||| |||||||| ||||| |||||||||||||||    
T  7343359 actctctccgtcctaaaatataagtaaaaattgatcaacaaaagttaatatattt 7343305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 233 - 263
Target Start/End: Complemental strand, 8830930 - 8830900
Alignment:
Q  233 aaatacattaacttttgttgaccaatttttg 263  Q
    |||||||||||||||||||||||||||||||    
T  8830930 aaatacattaacttttgttgaccaatttttg 8830900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 223
Target Start/End: Original strand, 28596080 - 28596129
Alignment:
Q  174 caaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaa 223  Q
    |||||| |||| |||||||||||||| ||| |||||||||||||| ||||    
T  28596080 caaaatgtaagtaaaaattggtcaacaaaaattaatatatttggttcaaa 28596129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 185 - 273
Target Start/End: Original strand, 8211799 - 8211887
Alignment:
Q  185 caaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatatttt 273  Q
    ||||||||| ||||  ||| |||||||||||||| | || |||  || ||||||||||| || |||||| | |||||| ||||||||||    
T  8211799 caaaaattgatcaataaaatttaatatatttggtccgaaatttgtactaaatacattaatttatgttgatctatttttacttatatttt 8211887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 202 - 274
Target Start/End: Complemental strand, 9675839 - 9675767
Alignment:
Q  202 aagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatattttg 274  Q
    |||||||| |||||  |||||| |||  |||| || ||| ||||| |||||||||||||||||||| ||||||    
T  9675839 aagttaatgtatttaatacaaaatttgtaccagatgcatcaacttatgttgaccaatttttgcttacattttg 9675767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 202 - 262
Target Start/End: Complemental strand, 33822365 - 33822305
Alignment:
Q  202 aagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaattttt 262  Q
    ||||| || |||||| |||||||||| ||| ||||| ||||||||||||| | ||||||||    
T  33822365 aagttgatgtatttgatacaaattttgaactaaatatattaacttttgttaatcaattttt 33822305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2113 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold2113
Description:

Target: scaffold2113; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 160 - 276
Target Start/End: Original strand, 568 - 683
Alignment:
Q  160 tactccctccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatt 259  Q
    |||||||||| ||||||| ||||||||||| ||||| ||| ||||||||| ||||||||||||||||| ||| ||||||| |||||||||||||| ||||    
T  568 tactccctccgtcccaaagtataagcaaaatttggt-aacaaaagttaatttatttggtacaaattttgaactaaatacaataacttttgttgactaatt 666  T
Q  260 tttgcttatattttggg 276  Q
    ||  |||||||||||||    
T  667 ttcacttatattttggg 683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2113; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 167 - 282
Target Start/End: Complemental strand, 688 - 574
Alignment:
Q  167 tccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgctt 266  Q
    ||||||||||||||||||  |||||| |||||| ||||||| | ||||| || |||| |||  |||||||| ||||||||||||| ||||| ||||||||    
T  688 tccatcccaaaatataagtgaaaattagtcaacaaaagttattgtatttagttcaaaatttgtaccaaataaattaacttttgtt-accaaattttgctt 590  T
Q  267 atattttggggcggag 282  Q
    ||| |||||| |||||    
T  589 atactttgggacggag 574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 2e-25; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 159 - 282
Target Start/End: Complemental strand, 12276940 - 12276817
Alignment:
Q  159 atactccctccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaat 258  Q
    ||||||| ||||| ||||||||||||||||||| |||||||  ||||| || ||||| ||| ||||||| || |||||||||||||||||| ||||||||    
T  12276940 atactccttccattccaaaatataagcaaaaataggtcaacataagttgatgtatttagtataaattttgaatcaaatacattaacttttgctgaccaat 12276841  T
Q  259 ttttgcttatattttggggcggag 282  Q
     ||| |||||||||| || |||||    
T  12276840 ctttacttatattttaggacggag 12276817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 211 - 276
Target Start/End: Original strand, 55827283 - 55827348
Alignment:
Q  211 tatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatattttggg 276  Q
    |||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  55827283 tatttgctacaaaattttaaccaaatatattaacttttgttgaccaatttttgcttatattttggg 55827348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 211 - 282
Target Start/End: Original strand, 55762906 - 55762977
Alignment:
Q  211 tatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatattttggggcggag 282  Q
    |||||| ||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||| |||||    
T  55762906 tatttgctacaaatttttaatcaaatatattaacttttgttgaccaatttttgtttatattttgggacggag 55762977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 165 - 275
Target Start/End: Original strand, 12276816 - 12276926
Alignment:
Q  165 cctccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgc 264  Q
    ||||| ||| |||||||||| ||| |||||||| | ||||||||| |||||| | |||| |||  || |||||||| ||||| |||||||| ||||||||    
T  12276816 cctccgtcctaaaatataagtaaagattggtcagcaaaagttaatgtatttgattcaaaatttatactaaatacatcaacttatgttgacctatttttgc 12276915  T
Q  265 ttatattttgg 275  Q
    |||||||||||    
T  12276916 ttatattttgg 12276926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 174 - 272
Target Start/End: Original strand, 54235227 - 54235325
Alignment:
Q  174 caaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatattt 272  Q
    |||||| |||||||||||  |||||   || || || ||||| ||||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||    
T  54235227 caaaatgtaagcaaaaatgagtcaatataaattgatgtatttagtacaaattttgaaccaaatacattaacttttgttgagcaatttttgtttatattt 54235325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 167 - 273
Target Start/End: Original strand, 30848588 - 30848696
Alignment:
Q  167 tccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttg--gtacaaatttttaaccaaatacattaacttttgttgaccaatttttgc 264  Q
    ||||||||||||| ||||||||||| | |||||  ||||| || ||| |   ||||||||||| ||| ||||||||||| ||||||||||||||||||||    
T  30848588 tccatcccaaaatgtaagcaaaaatggatcaacataagttgatgtatctaatgtacaaattttgaacaaaatacattaatttttgttgaccaatttttgc 30848687  T
Q  265 ttatatttt 273  Q
    ||| |||||    
T  30848688 ttacatttt 30848696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 171 - 276
Target Start/End: Original strand, 54009986 - 54010090
Alignment:
Q  171 tcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatat 270  Q
    |||||||||||||||||||||||||||||  ||||   | ||||||||| ||||||| || |||||||||||| ||||||| |  |||||||||||||||    
T  54009986 tcccaaaatataagcaaaaattggtcaacataagtgt-tctatttggtataaattttgaatcaaatacattaagttttgtttataaatttttgcttatat 54010084  T
Q  271 tttggg 276  Q
    | ||||    
T  54010085 tgtggg 54010090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 55762983 - 55762927
Alignment:
Q  160 tactccctccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttg 216  Q
    |||||||||| ||||||||||||| ||||||||||||||| ||||||||||||||||    
T  55762983 tactccctccgtcccaaaatataaacaaaaattggtcaacaaaagttaatatatttg 55762927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 171 - 227
Target Start/End: Complemental strand, 55827349 - 55827293
Alignment:
Q  171 tcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttt 227  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||    
T  55827349 tcccaaaatataagcaaaaattggtcaacaaaagttaatatatttggttaaaatttt 55827293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 171 - 276
Target Start/End: Complemental strand, 2871606 - 2871501
Alignment:
Q  171 tcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatat 270  Q
    ||||||||||||||||||||| ||| ||| |||||| || ||||| ||| |||||||| |||||||| || ||||||| | ||  |||||||  ||||||    
T  2871606 tcccaaaatataagcaaaaatcggtaaacaaaagttgatgtattttgtataaatttttgaccaaataaatcaacttttatagataaattttttgttatat 2871507  T
Q  271 tttggg 276  Q
    ||||||    
T  2871506 tttggg 2871501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 160 - 273
Target Start/End: Original strand, 44124222 - 44124335
Alignment:
Q  160 tactccctccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatt 259  Q
    |||||||||| ||| ||||| |||||||||||| | |  | ||||||||||| |||||   ||| ||| |||||||| ||||||||||||||||||||||    
T  44124222 tactccctccgtccaaaaatgtaagcaaaaatttgccttcaaaagttaatatttttggacgaaaatttaaaccaaatgcattaacttttgttgaccaatt 44124321  T
Q  260 tttgcttatatttt 273  Q
     || |||| |||||    
T  44124322 attacttacatttt 44124335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 171 - 275
Target Start/End: Complemental strand, 4423257 - 4423153
Alignment:
Q  171 tcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatat 270  Q
    ||||||||| ||||||||||| | ||||   ||||| || ||||||||||||||||| || |||||| ||||| |||| |||| |||||||  |||||||    
T  4423257 tcccaaaatgtaagcaaaaatggatcaatataagttgatgtatttggtacaaattttgaatcaaatatattaatttttattgatcaattttcacttatat 4423158  T
Q  271 tttgg 275  Q
    |||||    
T  4423157 tttgg 4423153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 230 - 281
Target Start/End: Complemental strand, 2734228 - 2734177
Alignment:
Q  230 accaaatacattaacttttgttgaccaatttttgcttatattttggggcgga 281  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||| ||||    
T  2734228 accaaatacattaacttttgttgactaatttttacttatattttgggacgga 2734177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 159 - 274
Target Start/End: Complemental strand, 54235342 - 54235227
Alignment:
Q  159 atactccctccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaat 258  Q
    ||||||||||||| |  |||||||| ||||||||| ||||| ||||||||| |||||||| |||| |||  || |||||||| || || | |||||  ||    
T  54235342 atactccctccattcttaaatataaacaaaaattgctcaacaaaagttaatgtatttggttcaaaatttgtactaaatacatcaatttatattgactcat 54235243  T
Q  259 ttttgcttatattttg 274  Q
    ||||||||| ||||||    
T  54235242 ttttgcttacattttg 54235227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 215 - 269
Target Start/End: Complemental strand, 3249749 - 3249695
Alignment:
Q  215 tggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttata 269  Q
    ||||| ||||||| |||||||||||||||||||||| ||||||||||| ||||||    
T  3249749 tggtataaattttgaaccaaatacattaacttttgtcgaccaatttttacttata 3249695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 208 - 283
Target Start/End: Original strand, 21606026 - 21606103
Alignment:
Q  208 atatatttggtacaaattttt--aaccaaatacattaacttttgttgaccaatttttgcttatattttggggcggagt 283  Q
    |||||||||||||| ||||||  ||||| | ||||||||||||| ||||||  |||||||||||||||||| ||||||    
T  21606026 atatatttggtacatattttttgaaccagacacattaacttttgctgaccacattttgcttatattttgggacggagt 21606103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 168 - 276
Target Start/End: Original strand, 2871497 - 2871605
Alignment:
Q  168 ccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgctta 267  Q
    ||||||||||||||||  |||||||  || |  |||||| || ||||||||  ||| |||  || |||||||| |||||||||| ||| |||||||||||    
T  2871497 ccatcccaaaatataacaaaaaatttatctataaaagttgatttatttggtcaaaaatttatacaaaatacatcaacttttgtttaccgatttttgctta 2871596  T
Q  268 tattttggg 276  Q
    |||||||||    
T  2871597 tattttggg 2871605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 158 - 274
Target Start/End: Original strand, 24980614 - 24980730
Alignment:
Q  158 tatactccctccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaa 257  Q
    |||||||||||| | | ||||| |||| |||||| | |||||  ||||| || ||| ||  |||||||||  || ||||||||||| |||||||||| ||    
T  24980614 tatactccctccgttctaaaatgtaagtaaaaatggatcaacataagttgatgtatctgacacaaattttgtacaaaatacattaatttttgttgacaaa 24980713  T
Q  258 tttttgcttatattttg 274  Q
    |||||||||| ||||||    
T  24980714 tttttgcttacattttg 24980730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 173 - 276
Target Start/End: Original strand, 4423153 - 4423256
Alignment:
Q  173 ccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatattt 272  Q
    ||||||||||||  ||||||| ||||  ||| |||||||||||| | |||| |||  ||||||||||| ||||| | |||| | ||||||||||| ||||    
T  4423153 ccaaaatataagtgaaaattgatcaataaaaattaatatatttgattcaaaatttgtaccaaatacatcaacttatattgatccatttttgcttacattt 4423252  T
Q  273 tggg 276  Q
    ||||    
T  4423253 tggg 4423256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 160 - 218
Target Start/End: Original strand, 2734170 - 2734228
Alignment:
Q  160 tactccctccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggt 218  Q
    |||||| ||| |||||||||||||| ||||||| |||||| ||||||||| ||||||||    
T  2734170 tactccttccgtcccaaaatataagtaaaaattagtcaacaaaagttaatgtatttggt 2734228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 275
Target Start/End: Original strand, 18995179 - 18995237
Alignment:
Q  217 gtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatattttgg 275  Q
    ||||||||||| |||||||||||||||||||| || || ||| |||||||| |||||||    
T  18995179 gtacaaattttgaaccaaatacattaacttttattaactaatgtttgcttacattttgg 18995237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 223 - 276
Target Start/End: Original strand, 18508871 - 18508924
Alignment:
Q  223 atttttaaccaaatacattaacttttgttgaccaatttttgcttatattttggg 276  Q
    ||||| ||| ||||||||||||||||||||||||||||| ||||  ||||||||    
T  18508871 attttgaactaaatacattaacttttgttgaccaattttcgcttccattttggg 18508924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 230 - 271
Target Start/End: Original strand, 48514596 - 48514637
Alignment:
Q  230 accaaatacattaacttttgttgaccaatttttgcttatatt 271  Q
    ||||||||||||||||||||||||| |||||||| |||||||    
T  48514596 accaaatacattaacttttgttgactaatttttgtttatatt 48514637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 171 - 276
Target Start/End: Complemental strand, 54010091 - 54009987
Alignment:
Q  171 tcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatat 270  Q
    ||||| ||||||||||||||||  | ||| ||| ||||| |||||| | |||| |||  |||||||| |  | ||| |||||||||||||||||||||||    
T  54010091 tcccacaatataagcaaaaatttataaacaaaacttaatgtatttgattcaaaatttataccaaatagaaca-cttatgttgaccaatttttgcttatat 54009993  T
Q  271 tttggg 276  Q
    ||||||    
T  54009992 tttggg 54009987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 163 - 215
Target Start/End: Complemental strand, 18508933 - 18508881
Alignment:
Q  163 tccctccatcccaaaatataagcaaaaattggtcaacgaaagttaatatattt 215  Q
    |||||||||||||||||  |||| ||||||||||||| ||||||||| |||||    
T  18508933 tccctccatcccaaaatggaagcgaaaattggtcaacaaaagttaatgtattt 18508881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 220 - 276
Target Start/End: Original strand, 33759429 - 33759484
Alignment:
Q  220 caaatttttaaccaaatacattaacttttgttgaccaatttttgcttatattttggg 276  Q
    |||||||| ||| ||||||||||| ||||||||||||| |||| |||||||||||||    
T  33759429 caaattttgaactaaatacattaatttttgttgaccaa-ttttacttatattttggg 33759484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 228 - 276
Target Start/End: Complemental strand, 40391307 - 40391259
Alignment:
Q  228 taaccaaatacattaacttttgttgaccaatttttgcttatattttggg 276  Q
    |||||||||||||||| ||||||||| | |||||| |||||||||||||    
T  40391307 taaccaaatacattaatttttgttgatcgatttttacttatattttggg 40391259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 202 - 243
Target Start/End: Original strand, 5496884 - 5496925
Alignment:
Q  202 aagttaatatatttggtacaaatttttaaccaaatacattaa 243  Q
    ||||| || ||||||||||||||||| |||||||||||||||    
T  5496884 aagttgatttatttggtacaaattttgaaccaaatacattaa 5496925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 190
Target Start/End: Complemental strand, 28669265 - 28669232
Alignment:
Q  157 atatactccctccatcccaaaatataagcaaaaa 190  Q
    ||||||||||||||||||| ||||||||||||||    
T  28669265 atatactccctccatcccataatataagcaaaaa 28669232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 261
Target Start/End: Complemental strand, 41615772 - 41615703
Alignment:
Q  193 ggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttga-ccaatttt 261  Q
    ||||||| ||||||||| |||||||    |||||||||| |||||||| |||||||||||| ||||||||    
T  41615772 ggtcaacaaaagttaatgtatttggacttaatttttaactaaatacatcaacttttgttgatccaatttt 41615703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 160 - 240
Target Start/End: Original strand, 3249676 - 3249756
Alignment:
Q  160 tactccctccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacat 240  Q
    |||||| ||||||  ||| |||||| ||||||||||| || ||||||||| |||||||| |||| |||  |||| ||||||    
T  3249676 tactccttccatcataaattataagtaaaaattggtcgacaaaagttaatgtatttggttcaaaatttataccagatacat 3249756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 3e-21; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 173 - 273
Target Start/End: Original strand, 35901039 - 35901139
Alignment:
Q  173 ccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatattt 272  Q
    |||||||||||||||||||  ||||||  ||||| || || || ||||||||||| | || |||||||||||||||||||||| ||||||||||||||||    
T  35901039 ccaaaatataagcaaaaatgagtcaacataagttgatgtaattagtacaaattttgagcccaatacattaacttttgttgacctatttttgcttatattt 35901138  T
Q  273 t 273  Q
    |    
T  35901139 t 35901139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 161 - 276
Target Start/End: Original strand, 7974778 - 7974893
Alignment:
Q  161 actccctccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaattt 260  Q
    ||||||||| ||| |||||||||  || ||| |||||||  || || |  ||||||||||||||||| |   |||||||||||||||| |||||||||||    
T  7974778 actccctccttccaaaaatataaaaaagaatgggtcaacataaattgacgtatttggtacaaattttgacaaaaatacattaacttttattgaccaattt 7974877  T
Q  261 ttgcttatattttggg 276  Q
    ||| ||||||||||||    
T  7974878 ttgtttatattttggg 7974893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 175 - 273
Target Start/End: Original strand, 33557781 - 33557879
Alignment:
Q  175 aaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatatttt 273  Q
    ||||| |||||||||| || |||||  ||||| || |||||| |||||||||| ||| |||||||||||||||| |||| |||||||| ||||| ||||    
T  33557781 aaaatgtaagcaaaaaatgatcaacataagtttatgtatttgatacaaattttgaactaaatacattaacttttattgatcaatttttacttatgtttt 33557879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 193 - 266
Target Start/End: Complemental strand, 13210050 - 13209977
Alignment:
Q  193 ggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgctt 266  Q
    |||||||  ||||| || ||| || |||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  13210050 ggtcaacataagttgatgtatctgatacaaattttgaaccaaatacattaacttttgttgatcaatttttgctt 13209977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 262
Target Start/End: Complemental strand, 11114349 - 11114253
Alignment:
Q  166 ctccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaattttt 262  Q
    |||| |||||||||||||| |||||||| |||||  ||||| || ||||||||| ||||||| |||  |||||||||| ||||||||| ||| ||||    
T  11114349 ctccgtcccaaaatataagtaaaaattgatcaacataagttgatgtatttggtataaattttaaactgaatacattaatttttgttgatcaactttt 11114253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 175 - 275
Target Start/End: Complemental strand, 35901139 - 35901039
Alignment:
Q  175 aaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatattttg 274  Q
    ||||||||||||||||| ||||||| ||||||||| |||| ||  |||| |||  || || ||||| ||||| |||||||  ||||||||||||||||||    
T  35901139 aaaatataagcaaaaataggtcaacaaaagttaatgtattgggctcaaaatttgtactaattacatcaacttatgttgactcatttttgcttatattttg 35901040  T
Q  275 g 275  Q
    |    
T  35901039 g 35901039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 202 - 273
Target Start/End: Complemental strand, 8777846 - 8777775
Alignment:
Q  202 aagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatatttt 273  Q
    |||||||| |||||  || ||||||| ||||||||| ||||||||||||||| ||||||||| |||||||||    
T  8777846 aagttaatgtatttaatataaattttgaaccaaatatattaacttttgttgatcaatttttgtttatatttt 8777775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 174 - 273
Target Start/End: Complemental strand, 29111064 - 29110965
Alignment:
Q  174 caaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatatttt 273  Q
    |||||||||| ||||||||| ||||||||| ||||| |||||||| |||| |||  |||||||||||| | || | |||||| ||| ||||||| |||||    
T  29111064 caaaatataaacaaaaattgatcaacgaaacttaatgtatttggttcaaaatttataccaaatacattcatttatattgacctattattgcttacatttt 29110965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 211 - 274
Target Start/End: Original strand, 29111001 - 29111064
Alignment:
Q  211 tatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatattttg 274  Q
    ||||||||| ||||||| ||||||||||||||| ||| ||||| ||||||||| ||||||||||    
T  29111001 tatttggtataaattttgaaccaaatacattaagtttcgttgatcaatttttgtttatattttg 29111064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 175 - 251
Target Start/End: Original strand, 8777775 - 8777851
Alignment:
Q  175 aaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgtt 251  Q
    ||||||||| ||||||||| ||||| |||||||||||||||||| |||| |||  |  |||||||||||||| ||||    
T  8777775 aaaatataaacaaaaattgatcaacaaaagttaatatatttggttcaaaatttatattaaatacattaacttatgtt 8777851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 160 - 267
Target Start/End: Complemental strand, 15114737 - 15114629
Alignment:
Q  160 tactccctccatcccaaaatataagcaaaaattggtcaacga-aagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaat 258  Q
    |||||||||||||| ||||| |||| |||||||| ||||  | || || |  ||||| | ||||||||| || |||||||||||| ||||||||||||||    
T  15114737 tactccctccatccaaaaatgtaagaaaaaattgatcaaacataaattgacgtatttagaacaaattttgaatcaaatacattaatttttgttgaccaat 15114638  T
Q  259 ttttgctta 267  Q
    |||| ||||    
T  15114637 tttttctta 15114629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 202 - 273
Target Start/End: Original strand, 9548082 - 9548153
Alignment:
Q  202 aagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatatttt 273  Q
    ||||| || ||||| ||||||||||| ||||||||| | ||| ||||||||| ||||||||| |||||||||    
T  9548082 aagttgatgtatttagtacaaattttgaaccaaatataataatttttgttgaacaatttttgtttatatttt 9548153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 230 - 282
Target Start/End: Original strand, 11114297 - 11114349
Alignment:
Q  230 accaaatacattaacttttgttgaccaatttttgcttatattttggggcggag 282  Q
    ||||||||||| ||||| |||||| |||||||| ||||||||||||| |||||    
T  11114297 accaaatacatcaacttatgttgatcaatttttacttatattttgggacggag 11114349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 173 - 260
Target Start/End: Original strand, 29797944 - 29798034
Alignment:
Q  173 ccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaa---atacattaacttttgttgaccaattt 260  Q
    ||||||| |||||||||||  || |||  || || || ||||||||||||||||| ||||||   ||||||||| ||||||||||||||||    
T  29797944 ccaaaatgtaagcaaaaatgagttaacataaatttatgtatttggtacaaattttgaaccaacaaatacattaatttttgttgaccaattt 29798034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 272
Target Start/End: Original strand, 8260079 - 8260197
Alignment:
Q  153 taatatatactccctccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttg 252  Q
    ||||| ||||| |||||||| ||| |||||| | ||||| | |||||  || || |||||||| ||||||||||| |||||| ||| ||||| |||| ||    
T  8260079 taatagatacttcctccatctcaagatataatcgaaaatagatcaacataa-ttgatatattttgtacaaattttgaaccaagtactttaacctttgctg 8260177  T
Q  253 accaatttttgcttatattt 272  Q
    |  || ||||||||||||||    
T  8260178 attaagttttgcttatattt 8260197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 273
Target Start/End: Complemental strand, 8637334 - 8637235
Alignment:
Q  174 caaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatatttt 273  Q
    |||||||||||||||| |  ||||| |||| || || |||||||  |||||||| ||||||||| || || |||| ||||| || | |||||||||||||    
T  8637334 caaaatataagcaaaattgagtcaaagaaaattgatgtatttggaccaaattttgaaccaaatatatcaattttttttgactaactattgcttatatttt 8637235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 215
Target Start/End: Complemental strand, 7974895 - 7974850
Alignment:
Q  170 atcccaaaatataagcaaaaattggtcaacgaaagttaatatattt 215  Q
    |||||||||||||| ||||||||||||||  ||||||||| |||||    
T  7974895 atcccaaaatataaacaaaaattggtcaataaaagttaatgtattt 7974850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 255
Target Start/End: Original strand, 13209977 - 13210050
Alignment:
Q  182 aagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgacc 255  Q
    |||||||||||| ||||| ||||||||| |||||||| |||| |||  | || |||||| ||||| ||||||||    
T  13209977 aagcaaaaattgatcaacaaaagttaatgtatttggttcaaaatttgtatcagatacatcaacttatgttgacc 13210050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 273
Target Start/End: Original strand, 44080662 - 44080779
Alignment:
Q  157 atatactccctccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttg-gtacaaatttttaaccaaatacattaacttttgttgacc 255  Q
    ||||| ||| ||| ||||||||||||| ||||||| |  ||||  ||||| |||||| |  ||| ||||||| |   ||||||||||| ||||||||| |    
T  44080662 atataatccatccgtcccaaaatataaacaaaaatggaccaacataagttgatatatatctgtataaattttgagttaaatacattaatttttgttgatc 44080761  T
Q  256 aatttttgcttatatttt 273  Q
    ||||||| ||||||||||    
T  44080762 aatttttacttatatttt 44080779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 232 - 276
Target Start/End: Complemental strand, 28725633 - 28725589
Alignment:
Q  232 caaatacattaacttttgttgaccaatttttgcttatattttggg 276  Q
    |||||||| ||| |||| |||||||||||||||||| ||||||||    
T  28725633 caaatacaataaattttattgaccaatttttgcttacattttggg 28725589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 160 - 192
Target Start/End: Original strand, 35344248 - 35344280
Alignment:
Q  160 tactccctccatcccaaaatataagcaaaaatt 192  Q
    |||||||||||||| ||||||||||||||||||    
T  35344248 tactccctccatcctaaaatataagcaaaaatt 35344280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 217 - 275
Target Start/End: Complemental strand, 13236 - 13178
Alignment:
Q  217 gtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatattttgg 275  Q
    ||||||||||| ||||||||||||||||||||||||| | ||||||||||| |||||||    
T  13236 gtacaaattttaaaccaaatacattaacttttgttgatccatttttgcttacattttgg 13178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 160 - 218
Target Start/End: Original strand, 13165 - 13223
Alignment:
Q  160 tactccctccatcccaaaatataagcaaaaattggtcaacgaaagttaatatatttggt 218  Q
    |||||||||||| ||||||| ||||||||||| | ||||| ||||||||| ||||||||    
T  13165 tactccctccattccaaaatgtaagcaaaaatggatcaacaaaagttaatgtatttggt 13223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 212 - 275
Target Start/End: Complemental strand, 28234 - 28171
Alignment:
Q  212 atttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatattttgg 275  Q
    ||||||||| |||||| ||||||||||||||||||||||| | ||||||||  |||||||||||    
T  28234 atttggtacgaattttgaaccaaatacattaacttttgttaatcaatttttatttatattttgg 28171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 211 - 262
Target Start/End: Complemental strand, 37979 - 37928
Alignment:
Q  211 tatttggtacaaatttttaaccaaatacattaacttttgttgaccaattttt 262  Q
    ||||||||| ||||||| |||||||||||||||||||||||||| |||||||    
T  37979 tatttggtataaattttaaaccaaatacattaacttttgttgactaattttt 37928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 186 - 273
Target Start/End: Complemental strand, 95039 - 94952
Alignment:
Q  186 aaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatatttt 273  Q
    ||||||||||||||  ||||| || ||||||||||||||||| |||  |||||||||| |||| |||| ||||||| ||||| |||||    
T  95039 aaaaattggtcaacataagttgatgtatttggtacaaattttgaacataatacattaatttttattgatcaattttcgcttacatttt 94952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 84 - 20
Alignment:
Q  190 attggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgac 254  Q
    |||||||||| |||||| || |||||||   |||||||||||||||||||| |||||||||||||    
T  84 attggtcaacaaaagttgatgtatttggactaaatttttaaccaaatacatcaacttttgttgac 20  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 212 - 273
Target Start/End: Original strand, 18291 - 18351
Alignment:
Q  212 atttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatatttt 273  Q
    ||||| |||||||||||||| ||||| ||||| ||||||||| ||||||||| |||||||||    
T  18291 atttgatacaaatttttaactaaatatattaa-ttttgttgatcaatttttgtttatatttt 18351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 273
Target Start/End: Original strand, 20368 - 20466
Alignment:
Q  175 aaaatataagcaaaaattggtcaacgaaagttaatatatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatatttt 273  Q
    ||||| |||| ||||||  ||||||  || ||||| |||||  |||||||||| ||||| |||| |||| ||||  ||||||||||||||||| |||||    
T  20368 aaaatgtaagtaaaaatatgtcaacataaattaatgtatttaatacaaattttaaaccacatacgttaatttttactgaccaatttttgcttacatttt 20466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 211 - 273
Target Start/End: Complemental strand, 36008 - 35946
Alignment:
Q  211 tatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatatttt 273  Q
    |||||| ||||||||||  |||||||||||||||  ||||||| ||||||||  |||||||||    
T  36008 tatttgatacaaattttgtaccaaatacattaacggttgttgatcaatttttatttatatttt 35946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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