View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1687-Insertion-3 (Length: 961)

Name: NF1687-Insertion-3
Description: NF1687
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1687-Insertion-3
NF1687-Insertion-3
[»] chr5 (72 HSPs)
chr5 (230-783)||(2897949-2898501)
chr5 (233-875)||(16930688-16931329)
chr5 (235-875)||(12950415-12951054)
chr5 (235-862)||(12936260-12936886)
chr5 (230-625)||(17644729-17645129)
chr5 (228-653)||(22964663-22965088)
chr5 (256-862)||(42057006-42057588)
chr5 (265-862)||(27809208-27809810)
chr5 (231-463)||(16930210-16930441)
chr5 (391-625)||(30471101-30471333)
chr5 (232-471)||(42056406-42056648)
chr5 (232-445)||(2401586-2401800)
chr5 (373-621)||(8213581-8213827)
chr5 (391-624)||(28109247-28109470)
chr5 (485-619)||(21038237-21038370)
chr5 (232-471)||(22965592-22965822)
chr5 (354-471)||(12951469-12951587)
chr5 (354-471)||(12937306-12937424)
chr5 (373-463)||(8214178-8214268)
chr5 (230-359)||(39939959-39940089)
chr5 (672-798)||(17645177-17645302)
chr5 (386-460)||(39940089-39940163)
chr5 (354-472)||(2898930-2899049)
chr5 (258-342)||(2899032-2899117)
chr5 (745-822)||(28109047-28109124)
chr5 (265-463)||(27808590-27808784)
chr5 (672-820)||(21038421-21038564)
chr5 (256-341)||(12937408-12937493)
chr5 (485-621)||(12950990-12951126)
chr5 (485-616)||(16930621-16930752)
chr5 (745-822)||(41473012-41473089)
chr5 (794-875)||(8213674-8213755)
chr5 (391-463)||(21038954-21039026)
chr5 (745-862)||(41476991-41477108)
chr5 (382-453)||(17646538-17646609)
chr5 (232-313)||(8214283-8214365)
chr5 (256-341)||(12951571-12951656)
chr5 (404-471)||(18966655-18966723)
chr5 (391-435)||(21038119-21038163)
chr5 (520-591)||(42036074-42036145)
chr5 (535-621)||(12936877-12936963)
chr5 (795-862)||(17646037-17646104)
chr5 (404-472)||(16930459-16930528)
chr5 (404-472)||(17646288-17646357)
chr5 (745-814)||(18966926-18966995)
chr5 (391-472)||(18966940-18967020)
chr5 (391-472)||(31064524-31064605)
chr5 (535-616)||(41473119-41473200)
chr5 (232-306)||(17646609-17646685)
chr5 (492-621)||(27809131-27809252)
chr5 (745-870)||(30471182-30471307)
chr5 (537-616)||(18966808-18966886)
chr5 (412-463)||(28108754-28108805)
chr5 (567-621)||(17646127-17646181)
chr5 (783-821)||(18966630-18966668)
chr5 (778-865)||(28109324-28109411)
chr5 (399-460)||(10284102-10284163)
chr5 (392-469)||(21098362-21098439)
chr5 (404-472)||(42056812-42056881)
chr5 (535-615)||(2898525-2898605)
chr5 (391-439)||(6807792-6807840)
chr5 (404-460)||(41473314-41473370)
chr5 (412-463)||(2898727-2898778)
chr5 (253-319)||(6807919-6807986)
chr5 (411-457)||(12937237-12937283)
chr5 (411-457)||(12951400-12951446)
chr5 (535-621)||(28108921-28109007)
chr5 (535-621)||(42056929-42057015)
chr5 (242-306)||(8213478-8213543)
chr5 (792-870)||(27809520-27809598)
chr5 (391-444)||(30463566-30463619)
chr5 (392-457)||(42056671-42056736)
[»] chr1 (41 HSPs)
chr1 (249-875)||(34814497-34815121)
chr1 (279-871)||(51935439-51936028)
chr1 (508-862)||(7998843-7999195)
chr1 (391-625)||(48899033-48899269)
chr1 (262-460)||(7998215-7998414)
chr1 (309-471)||(34815510-34815673)
chr1 (390-616)||(47357152-47357368)
chr1 (354-463)||(51936454-51936563)
chr1 (745-871)||(47356863-47356992)
chr1 (392-472)||(7999209-7999289)
chr1 (745-862)||(48899387-48899504)
chr1 (485-616)||(34815057-34815188)
chr1 (511-616)||(5865739-5865844)
chr1 (490-621)||(51935973-51936104)
chr1 (237-306)||(37504996-37505066)
chr1 (232-342)||(51936546-51936658)
chr1 (263-377)||(45423240-45423352)
chr1 (404-472)||(51936213-51936282)
chr1 (498-585)||(31106460-31106547)
chr1 (535-621)||(7998766-7998852)
chr1 (391-457)||(45423044-45423110)
chr1 (404-472)||(34815281-34815350)
chr1 (395-463)||(45423142-45423210)
chr1 (393-572)||(6131410-6131578)
chr1 (778-820)||(6131746-6131788)
chr1 (747-809)||(7280953-7281015)
chr1 (231-281)||(35574466-35574516)
chr1 (263-344)||(45422906-45422988)
chr1 (391-459)||(48899763-48899832)
chr1 (261-308)||(16002638-16002686)
chr1 (745-821)||(28357093-28357169)
chr1 (232-299)||(37504581-37504649)
chr1 (231-342)||(7999311-7999422)
chr1 (391-458)||(47356386-47356453)
chr1 (399-472)||(6131766-6131839)
chr1 (571-616)||(11346851-11346896)
chr1 (232-285)||(14441118-14441171)
chr1 (401-438)||(25484267-25484304)
chr1 (393-457)||(34815422-34815487)
chr1 (783-820)||(47356604-47356641)
chr1 (392-457)||(51936357-51936422)
[»] chr3 (42 HSPs)
chr3 (233-822)||(48097342-48097930)
chr3 (356-862)||(54921499-54922003)
chr3 (241-625)||(47640977-47641357)
chr3 (26-231)||(21346636-21346839)
chr3 (373-625)||(45265583-45265832)
chr3 (230-460)||(45266352-45266584)
chr3 (677-875)||(45265885-45266082)
chr3 (672-862)||(47641406-47641598)
chr3 (356-471)||(54922418-54922534)
chr3 (356-471)||(48097992-48098108)
chr3 (402-615)||(314291-314502)
chr3 (485-625)||(37526152-37526292)
chr3 (391-471)||(17074535-17074616)
chr3 (232-336)||(47642732-47642837)
chr3 (745-862)||(17074003-17074119)
chr3 (256-345)||(54922516-54922605)
chr3 (411-585)||(46507947-46508122)
chr3 (232-345)||(48098090-48098205)
chr3 (382-460)||(47642637-47642715)
chr3 (233-333)||(21196545-21196648)
chr3 (485-615)||(45266018-45266148)
chr3 (745-822)||(37525633-37525710)
chr3 (508-625)||(37525827-37525944)
chr3 (535-621)||(47641589-47641675)
chr3 (232-344)||(21196417-21196531)
chr3 (393-621)||(54921862-54922080)
chr3 (256-342)||(54921427-54921514)
chr3 (745-818)||(45266277-45266350)
chr3 (745-822)||(46507953-46508030)
chr3 (508-606)||(26267704-26267802)
chr3 (387-472)||(37525655-37525739)
chr3 (404-457)||(45266264-45266317)
chr3 (232-350)||(45265460-45265580)
chr3 (407-458)||(17074308-17074359)
chr3 (745-820)||(37525958-37526033)
chr3 (775-821)||(17074502-17074548)
chr3 (391-441)||(37526303-37526353)
chr3 (386-427)||(314167-314208)
chr3 (261-306)||(31401111-31401156)
chr3 (258-306)||(37460533-37460582)
chr3 (412-472)||(47641791-47641852)
chr3 (412-472)||(54922197-54922258)
[»] chr4 (65 HSPs)
chr4 (241-875)||(35143452-35144084)
chr4 (354-875)||(50910317-50910836)
chr4 (230-619)||(11014298-11014690)
chr4 (353-875)||(38194001-38194524)
chr4 (235-625)||(9617212-9617600)
chr4 (354-862)||(40731374-40731880)
chr4 (232-622)||(52074357-52074721)
chr4 (672-875)||(11014744-11014946)
chr4 (672-875)||(9617651-9617853)
chr4 (232-471)||(11015364-11015603)
chr4 (228-460)||(38193360-38193580)
chr4 (678-857)||(52074120-52074299)
chr4 (388-625)||(33436298-33436520)
chr4 (350-471)||(50911256-50911378)
chr4 (673-821)||(33436881-33437028)
chr4 (354-471)||(35142935-35143053)
chr4 (354-471)||(40732299-40732417)
chr4 (354-471)||(9618263-9618381)
chr4 (672-822)||(33436569-33436719)
chr4 (230-345)||(38194503-38194619)
chr4 (745-822)||(31433085-31433162)
chr4 (391-458)||(46641466-46641533)
chr4 (231-342)||(9618364-9618477)
chr4 (257-345)||(35142866-35142955)
chr4 (249-345)||(40732397-40732494)
chr4 (485-621)||(11014882-11015018)
chr4 (328-406)||(55686175-55686253)
chr4 (485-621)||(9617789-9617925)
chr4 (391-463)||(33437509-33437581)
chr4 (485-621)||(50910773-50910908)
chr4 (373-460)||(52073609-52073696)
chr4 (529-622)||(31432873-31432966)
chr4 (391-460)||(31433631-31433700)
chr4 (393-621)||(38193929-38194155)
chr4 (391-615)||(2265797-2266010)
chr4 (485-621)||(35143380-35143515)
chr4 (535-625)||(33436756-33436846)
chr4 (391-472)||(31432745-31432826)
chr4 (745-820)||(35218764-35218839)
chr4 (391-463)||(33437729-33437800)
chr4 (232-318)||(40730590-40730678)
chr4 (745-816)||(2266146-2266217)
chr4 (535-585)||(35218215-35218265)
chr4 (536-585)||(2266255-2266304)
chr4 (745-822)||(35218415-35218492)
chr4 (404-472)||(50911015-50911084)
chr4 (404-471)||(33437266-33437334)
chr4 (387-621)||(41534657-41534882)
chr4 (535-621)||(40731871-40731957)
chr4 (258-320)||(52073534-52073595)
chr4 (404-472)||(38193752-38193821)
chr4 (392-457)||(38964568-38964633)
chr4 (404-472)||(40732067-40732136)
chr4 (745-821)||(35218106-35218182)
chr4 (783-815)||(42577446-42577478)
chr4 (256-315)||(55686237-55686297)
chr4 (412-463)||(2266456-2266507)
chr4 (404-463)||(9618033-9618092)
chr4 (393-472)||(35218391-35218470)
chr4 (537-612)||(42577206-42577280)
chr4 (231-281)||(2772255-2772305)
chr4 (535-621)||(33437069-33437154)
chr4 (232-276)||(32715269-32715314)
chr4 (404-472)||(35143203-35143272)
chr4 (391-472)||(35218080-35218161)
[»] chr8 (53 HSPs)
chr8 (232-875)||(42001264-42001904)
chr8 (368-821)||(27642192-27642641)
chr8 (263-862)||(8816037-8816636)
chr8 (241-471)||(42000618-42000850)
chr8 (391-616)||(24535705-24535928)
chr8 (495-615)||(3152897-3153017)
chr8 (671-863)||(21543655-21543846)
chr8 (391-622)||(28427066-28427295)
chr8 (508-625)||(35588258-35588375)
chr8 (357-460)||(27641628-27641731)
chr8 (391-472)||(21544000-21544081)
chr8 (356-471)||(2809081-2809197)
chr8 (391-465)||(21544266-21544340)
chr8 (492-616)||(28427973-28428089)
chr8 (232-345)||(2809179-2809293)
chr8 (391-468)||(14109730-14109807)
chr8 (672-822)||(35588421-35588570)
chr8 (232-339)||(40678229-40678338)
chr8 (391-465)||(21544525-21544599)
chr8 (382-474)||(40678123-40678215)
chr8 (485-616)||(42001197-42001328)
chr8 (752-856)||(14109369-14109471)
chr8 (747-821)||(28427781-28427855)
chr8 (391-464)||(14112874-14112946)
chr8 (745-822)||(28427415-28427492)
chr8 (232-345)||(27641530-27641645)
chr8 (747-870)||(24535733-24535856)
chr8 (485-621)||(8815960-8816088)
chr8 (404-463)||(42001025-42001084)
chr8 (535-621)||(21543579-21543665)
chr8 (747-821)||(24536475-24536549)
chr8 (508-557)||(21543907-21543955)
chr8 (788-870)||(28427135-28427217)
chr8 (561-621)||(27642087-27642147)
chr8 (404-471)||(28427726-28427794)
chr8 (747-814)||(24536053-24536120)
chr8 (518-585)||(28992202-28992269)
chr8 (535-621)||(2808944-2809030)
chr8 (745-814)||(3153139-3153208)
chr8 (412-470)||(28991651-28991709)
chr8 (789-822)||(28991962-28991995)
chr8 (565-621)||(24536188-24536244)
chr8 (407-463)||(24536357-24536413)
chr8 (565-621)||(24536610-24536666)
chr8 (407-463)||(24536780-24536836)
chr8 (412-463)||(14112802-14112852)
chr8 (404-463)||(21543410-21543469)
chr8 (412-458)||(8815795-8815841)
chr8 (778-820)||(21543371-21543413)
chr8 (231-288)||(27642672-27642729)
chr8 (392-457)||(28991999-28992064)
chr8 (789-822)||(28992296-28992329)
chr8 (258-334)||(38034907-38034983)
[»] chr6 (33 HSPs)
chr6 (261-816)||(22018452-22019002)
chr6 (357-618)||(9904371-9904631)
chr6 (391-862)||(4221797-4222263)
chr6 (392-625)||(33203131-33203363)
chr6 (230-463)||(22019459-22019694)
chr6 (672-875)||(9904119-9904321)
chr6 (506-614)||(12776942-12777050)
chr6 (499-624)||(26838093-26838218)
chr6 (490-615)||(9477165-9477290)
chr6 (391-471)||(4222575-4222656)
chr6 (745-862)||(12776699-12776816)
chr6 (702-822)||(33202938-33203057)
chr6 (391-464)||(26838012-26838085)
chr6 (745-875)||(26838335-26838464)
chr6 (485-621)||(9904047-9904183)
chr6 (535-621)||(12776622-12776708)
chr6 (395-471)||(26839070-26839147)
chr6 (498-610)||(9487646-9487758)
chr6 (382-431)||(9903636-9903685)
chr6 (391-471)||(12776250-12776331)
chr6 (232-313)||(9904617-9904700)
chr6 (404-472)||(22019223-22019292)
chr6 (391-471)||(33202422-33202503)
chr6 (535-621)||(22019028-22019114)
chr6 (263-344)||(33203420-33203502)
chr6 (508-621)||(26838423-26838536)
chr6 (263-344)||(26839207-26839289)
chr6 (778-820)||(9903841-9903883)
chr6 (768-855)||(10231955-10232042)
chr6 (489-557)||(25196662-25196729)
chr6 (537-591)||(25915160-25915214)
chr6 (567-616)||(9491015-9491064)
chr6 (535-616)||(33202825-33202906)
[»] chr2 (53 HSPs)
chr2 (354-862)||(31298298-31298802)
chr2 (261-816)||(44328560-44329110)
chr2 (256-625)||(15629300-15629656)
chr2 (357-822)||(6172176-6172627)
chr2 (356-615)||(44655432-44655688)
chr2 (232-471)||(31297640-31297881)
chr2 (513-871)||(36583552-36583916)
chr2 (672-875)||(44655745-44655949)
chr2 (672-875)||(15629678-15629880)
chr2 (230-463)||(44329567-44329802)
chr2 (232-345)||(31298782-31298897)
chr2 (230-471)||(36584299-36584531)
chr2 (354-524)||(31477-31645)
chr2 (391-625)||(40439992-40440215)
chr2 (354-460)||(44656413-44656519)
chr2 (745-872)||(44702856-44702983)
chr2 (231-471)||(15630292-15630511)
chr2 (356-463)||(3259969-3260076)
chr2 (361-457)||(6172942-6173038)
chr2 (358-449)||(3260091-3260182)
chr2 (373-472)||(36583450-36583549)
chr2 (230-342)||(44655333-44655447)
chr2 (233-345)||(44656499-44656613)
chr2 (249-345)||(3259890-3259987)
chr2 (232-345)||(31382-31497)
chr2 (497-615)||(44655897-44656015)
chr2 (485-625)||(15629816-15629956)
chr2 (527-615)||(44702613-44702703)
chr2 (508-621)||(36583879-36583992)
chr2 (404-472)||(6172851-6172920)
chr2 (232-322)||(6173041-6173133)
chr2 (672-732)||(10601435-10601495)
chr2 (567-621)||(10601594-10601648)
chr2 (232-296)||(10602210-10602275)
chr2 (404-472)||(44329331-44329400)
chr2 (485-586)||(44702922-44703023)
chr2 (235-321)||(3260190-3260278)
chr2 (419-463)||(34414932-34414976)
chr2 (230-307)||(6172105-6172184)
chr2 (421-463)||(10602140-10602182)
chr2 (392-457)||(34414834-34414900)
chr2 (745-863)||(40440018-40440135)
chr2 (535-621)||(44329136-44329222)
chr2 (404-472)||(10601757-10601826)
chr2 (387-444)||(24774240-24774297)
chr2 (754-785)||(10601496-10601527)
chr2 (485-621)||(31298221-31298349)
chr2 (535-621)||(6172658-6172744)
chr2 (232-281)||(6975962-6976012)
chr2 (392-457)||(31297904-31297970)
chr2 (404-458)||(44656130-44656184)
chr2 (411-456)||(29425508-29425553)
chr2 (404-472)||(31298045-31298114)
[»] chr7 (36 HSPs)
chr7 (356-625)||(31602620-31602890)
chr7 (354-625)||(14815451-14815712)
chr7 (354-625)||(15262446-15262707)
chr7 (673-862)||(48556144-48556332)
chr7 (672-875)||(47610630-47610832)
chr7 (672-875)||(31602370-31602573)
chr7 (672-862)||(25694698-25694887)
chr7 (391-624)||(47610880-47611096)
chr7 (508-622)||(25694938-25695052)
chr7 (230-463)||(25694056-25694272)
chr7 (391-468)||(22929022-22929099)
chr7 (354-471)||(48556751-48556869)
chr7 (235-341)||(31602876-31602984)
chr7 (372-439)||(25695051-25695118)
chr7 (267-341)||(14815392-14815467)
chr7 (267-341)||(15262387-15262462)
chr7 (485-621)||(47610558-47610694)
chr7 (411-463)||(6038060-6038112)
chr7 (497-621)||(31602298-31602422)
chr7 (395-461)||(25609550-25609617)
chr7 (785-820)||(35248803-35248838)
chr7 (485-621)||(48556281-48556409)
chr7 (392-457)||(25694304-25694369)
chr7 (391-471)||(31602123-31602204)
chr7 (404-472)||(48556517-48556586)
chr7 (393-449)||(35248846-35248902)
chr7 (412-463)||(23939076-23939127)
chr7 (778-821)||(48556721-48556764)
chr7 (231-276)||(1299103-1299149)
chr7 (413-463)||(22929302-22929352)
chr7 (404-458)||(25694459-25694513)
chr7 (567-621)||(25694621-25694675)
chr7 (778-820)||(31602093-31602135)
chr7 (748-821)||(6037991-6038064)
chr7 (392-445)||(23938979-23939032)
chr7 (424-457)||(47610325-47610358)
[»] scaffold0004 (9 HSPs)
scaffold0004 (391-622)||(128084-128313)
scaffold0004 (232-356)||(130486-130612)
scaffold0004 (354-460)||(127299-127405)
scaffold0004 (228-345)||(127200-127319)
scaffold0004 (745-822)||(127887-127964)
scaffold0004 (788-870)||(128162-128244)
scaffold0004 (567-621)||(127758-127812)
scaffold0004 (392-457)||(127440-127505)
scaffold0004 (412-472)||(127580-127641)
[»] scaffold0055 (30 HSPs)
scaffold0055 (399-616)||(35232-35447)
scaffold0055 (399-616)||(34108-34323)
scaffold0055 (399-616)||(53280-53495)
scaffold0055 (400-616)||(18855-19069)
scaffold0055 (400-616)||(36277-36491)
scaffold0055 (400-616)||(43938-44152)
scaffold0055 (493-616)||(56664-56787)
scaffold0055 (493-616)||(75325-75448)
scaffold0055 (493-615)||(74299-74421)
scaffold0055 (399-615)||(55627-55841)
scaffold0055 (493-615)||(42913-43035)
scaffold0055 (399-615)||(19892-20106)
scaffold0055 (392-621)||(11510-11737)
scaffold0055 (783-867)||(19948-20032)
scaffold0055 (783-867)||(42987-43071)
scaffold0055 (783-867)||(55701-55785)
scaffold0055 (783-867)||(74373-74457)
scaffold0055 (485-541)||(11113-11169)
scaffold0055 (485-541)||(29926-29982)
scaffold0055 (778-865)||(18905-18992)
scaffold0055 (778-865)||(34185-34272)
scaffold0055 (778-865)||(35309-35396)
scaffold0055 (778-865)||(36354-36441)
scaffold0055 (399-469)||(43057-43127)
scaffold0055 (778-865)||(44015-44102)
scaffold0055 (778-865)||(53357-53444)
scaffold0055 (778-865)||(56741-56828)
scaffold0055 (399-469)||(74443-74513)
scaffold0055 (532-621)||(3655-3744)
scaffold0055 (400-469)||(56809-56878)
[»] scaffold0515 (3 HSPs)
scaffold0515 (390-621)||(10781-11010)
scaffold0515 (392-616)||(11830-12052)
scaffold0515 (778-867)||(11888-11977)
[»] scaffold0152 (8 HSPs)
scaffold0152 (390-621)||(37177-37406)
scaffold0152 (390-621)||(18350-18580)
scaffold0152 (392-616)||(19400-19622)
scaffold0152 (392-616)||(33090-33312)
scaffold0152 (392-616)||(38226-38448)
scaffold0152 (778-867)||(19458-19547)
scaffold0152 (778-867)||(33165-33254)
scaffold0152 (778-867)||(38284-38373)
[»] scaffold0052 (27 HSPs)
scaffold0052 (399-616)||(61741-61956)
scaffold0052 (400-616)||(2737-2951)
scaffold0052 (400-616)||(17273-17487)
scaffold0052 (400-616)||(40753-40967)
scaffold0052 (493-616)||(54268-54391)
scaffold0052 (493-615)||(30024-30146)
scaffold0052 (399-615)||(41790-42004)
scaffold0052 (399-615)||(53233-53447)
scaffold0052 (493-615)||(3866-3988)
scaffold0052 (399-615)||(18299-18512)
scaffold0052 (392-621)||(72798-73025)
scaffold0052 (783-867)||(3830-3914)
scaffold0052 (783-867)||(18355-18439)
scaffold0052 (783-867)||(30098-30182)
scaffold0052 (783-867)||(41846-41930)
scaffold0052 (783-867)||(53307-53391)
scaffold0052 (485-541)||(66083-66139)
scaffold0052 (485-541)||(73366-73422)
scaffold0052 (778-865)||(2787-2874)
scaffold0052 (399-433)||(3774-3808)
scaffold0052 (778-865)||(17323-17410)
scaffold0052 (399-469)||(30168-30238)
scaffold0052 (778-865)||(40803-40890)
scaffold0052 (778-865)||(54345-54432)
scaffold0052 (778-865)||(61792-61879)
scaffold0052 (400-469)||(54413-54482)
scaffold0052 (532-621)||(80791-80880)
[»] scaffold0113 (3 HSPs)
scaffold0113 (387-587)||(47335-47533)
scaffold0113 (745-870)||(47378-47503)
scaffold0113 (745-820)||(47103-47178)
[»] scaffold0021 (10 HSPs)
scaffold0021 (392-621)||(49965-50192)
scaffold0021 (388-621)||(38960-39191)
scaffold0021 (399-615)||(48904-49118)
scaffold0021 (392-469)||(95646-95723)
scaffold0021 (392-621)||(51106-51333)
scaffold0021 (783-867)||(48978-49062)
scaffold0021 (778-867)||(50045-50134)
scaffold0021 (392-457)||(40588-40653)
scaffold0021 (569-614)||(95503-95548)
scaffold0021 (785-867)||(95576-95658)
[»] scaffold0495 (1 HSPs)
scaffold0495 (768-813)||(8675-8720)


Alignment Details
Target: chr5 (Bit Score: 302; Significance: 1e-169; HSPs: 72)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 302; E-Value: 1e-169
Query Start/End: Original strand, 230 - 783
Target Start/End: Original strand, 2897949 - 2898501
Alignment:
Q  230 aagaaaattgctttttt-atatagaaaacttcctattgacacaaataaatgaccaaattac-tccagcggtagttaactgtctctggcatatgcgtcggc 327  Q
    |||| |||||||||||| | || ||| | ||||||||||||||| |||||||||||||||| |||||||||||||||||| |||||||||||||| |  |    
T  2897949 aagagaattgcttttttgacattgaatatttcctattgacacaagtaaatgaccaaattacctccagcggtagttaactgcctctggcatatgcgccaac 2898048  T
Q  328 agttaattgccgctggctccttcagaggcagttaactgctgctggctttgatgttttttattatgattttacgcgtttcggtcaaaaaatcaaaataaat 427  Q
    |||||| |||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  2898049 agttaactgccgctggctccttcagaggcagttaactgccgctgactttgatgctttttattatgattttacgcgtttcggtcgaaaaatcaaaataaat 2898148  T
Q  428 cgaaacttattcggaattctacgaaactttacagaccctctatattttannnnnnnnagagatgtctgcaaaaaaccagatcaaaattcaatttctaagt 527  Q
    |||||||||||| |||||||||||||||||||||||||||||||| |          |||| ||||||||||||||||||||||||||||||||||| ||    
T  2898149 cgaaacttattcagaattctacgaaactttacagaccctctatatat--atttttttagagctgtctgcaaaaaaccagatcaaaattcaatttctaggt 2898246  T
Q  528 cgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatccgttctcgaaaaattctaattttttgcgggaaatgnn 627  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||      
T  2898247 cgacgttttgatgttttggtttcttgagttattggcgcattaaaaattcatatttaatccatctgttgtcgaaaaattctaattttttgcgggaaatgtt 2898346  T
Q  628 nnnnnnnatgttcttaatatgtgtacnnnnnnnnnnnnnnnnnctcaacctctatataacttttccgggcacgtagttagaaaaatattgcaattttacg 727  Q
           |||||||||||||||||||                  |||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  2898347 tttttttatgttcttaatatgtgtacaaaaaataatgaaaaaaatcaacctctatataacttttccggacacgtagttagaaaaatattgcaattttacg 2898446  T
Q  728 cgttttagtnnnnnnnntcaaaataaattgaggattactcgaaatactaagaaaat 783  Q
    |||||||||        |||||||||||||||||||||||||||||||||||||||    
T  2898447 cgttttagt-aaaaaaatcaaaataaattgaggattactcgaaatactaagaaaat 2898501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 233 - 875
Target Start/End: Complemental strand, 16931329 - 16930688
Alignment:
Q  233 aaaattgctttttt-atatagaaaacttcctattgacacaaataaatgaccaaattactcc-agcggtagttaactgtctctggcatatgcgtcggcagt 330  Q
    |||||||||||||| | |||||| | |||||||||||| || |||||||||||||||| || ||||||||||||||| ||||||||||||||  ||||||    
T  16931329 aaaattgcttttttgacatagaatatttcctattgacataagtaaatgaccaaattacccccagcggtagttaactgcctctggcatatgcgctggcagt 16931230  T
Q  331 taattgccgctggctccttcagaggcagttaactgctgctggctttgatgttttttattatgattttacgcgtttcggtcaaaaaatcaaaataaatcga 430  Q
    |||| ||||||||||||| ||||||||||||||||| | |||||||| || ||||||||||||||||||||||||||||| |||||||||||||||| ||    
T  16931229 taat-gccgctggctcctccagaggcagttaactgccgttggctttgctgctttttattatgattttacgcgtttcggtcgaaaaatcaaaataaattga 16931131  T
Q  431 aacttattcggaattctacgaaactttacagaccctctatattttannnnnnnnagagatgtctgcaaaaaaccagatcaaaattcaatttctaagtcga 530  Q
    || |||||| |||||||||||||||||||||||||||||||| |          ||||  |||||||||||| |||||||||||||||||| || |||||    
T  16931130 aatttattcagaattctacgaaactttacagaccctctatatat--atttttttagagccgtctgcaaaaaatcagatcaaaattcaatttttaggtcga 16931033  T
Q  531 cgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatcc-gttctcgaaaaattctaattttttgcgggaaatgnnnn 629  Q
    | ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||  || ||||||||||||||||||||||||||||||        
T  16931032 cattttgatgttttggtttcttgagttattgacgcattaaaaattcatatttaatccatccaattgtcgaaaaattctaattttttgcgggaaatgtttt 16930933  T
Q  630 nnnnnatgttcttaatatgtgtacnnnnnnnnnnnnnnnnnctcaacctctatataacttttccgggcacgtagttagaaaaatattgcaattttacgcg 729  Q
         ||||||||||||||||||                   |||||||||||||||||||||||| |  | |||||||||||||||||||||||| |||    
T  16930932 tttttatgttcttaatatgtgtaaaaaataatgaaaaaaaattcaacctctatataacttttccggacgtgaagttagaaaaatattgcaattttatgcg 16930833  T
Q  730 ttttagtnnnnnnnntcaaaataaattgaggattactcgaaatactaagaaaatttgcagatcctctatatgtatttttatagaggtgtctgcnnnnnnn 829  Q
    ||| |||        ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||           
T  16930832 tttcagt-aaaaaaatcaaaataaattgaggattactcgaaatactaagaaaattttcagatcctctatatgtatttttatagaggtgtctgcaaaaaaa 16930734  T
Q  830 cagctcaaaattcaatttttaggttgatattttgatgttttcgtgt 875  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||    
T  16930733 cagctaaaaattcaatttttaggttgatgttttgatgttttcgtgt 16930688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 280; E-Value: 1e-156
Query Start/End: Original strand, 235 - 875
Target Start/End: Original strand, 12950415 - 12951054
Alignment:
Q  235 aattgctttttt-atatagaaaacttcctattgacacaaataaatgaccaaattactcc-agcggtagttaactgtctctggcatatgcgtcggcagtta 332  Q
    |||||||||||| | || ||| ||||||||||||||||| |||||| ||||||||| || |  |||||||||||| |||||||||||||  |||||||||    
T  12950415 aattgcttttttgacattgaatacttcctattgacacaagtaaatgtccaaattacccccaatggtagttaactgcctctggcatatgcaccggcagtta 12950514  T
Q  333 attgccgctggctccttcagaggcagttaactgctgctggctttgatgttttttattatgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaa 432  Q
    | || ||||||||||| |||||||||||||| || ||||| |||| || ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  12950515 actgtcgctggctcctccagaggcagttaaccgccgctggttttgctgctttttattatgattttacgcgtttcggtcgaaaaatcaaaataaatcgaaa 12950614  T
Q  433 cttattcggaattctacgaaactttacagaccctctatattttannnnnnnnagagatgtctgcaaaaaaccagatcaaaattcaatttctaagtcgacg 532  Q
    | ||||| |||||||| ||||||||||||||||||||||| |          |||| ||||||||||||||||||||||||||||||||||| |||||||    
T  12950615 catattcagaattctatgaaactttacagaccctctatatat--atttttttagagctgtctgcaaaaaaccagatcaaaattcaatttctaggtcgacg 12950712  T
Q  533 ttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatccgttctcgaaaaattctaattttttgcgggaaatgnnnnnnn 632  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| |||||||||||||||||||||||  |||||           
T  12950713 ttttgatgttttggtttcttgagttattgacgcattaaaaattcatatttaatccatccgttgtcgaaaaattctaattttttgcgcaaaatgttttttt 12950812  T
Q  633 nnatgttcttaatatgtgtacnnnnnnnnnnnnnnnnnctcaacctctatataacttttccgggcacgtagttagaaaaatattgcaattttacgcgttt 732  Q
      |||||| ||| ||||||||                  ||||| |||||||||||||||||| | | ||| |||||||||||||||||||||| |||||    
T  12950813 ttatgttcctaacatgtgtacaaaaaataatgaaaaaattcaacttctatataacttttccggacgcataggtagaaaaatattgcaattttactcgttt 12950912  T
Q  733 tagtnnnnnnnntcaaaataaattgaggattactcgaaatactaagaaaatttgcagatcctctatatgtatttttatagaggtgtctgcnnnnnnncag 832  Q
     |||        |||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||||||||||       |||    
T  12950913 cagt-aaaaaaatcaaaagaaattgaggattactcgaaataccaagaaaatttgcaaatcctctatatgtattttaatagaggtgtctgcataaaaacag 12951011  T
Q  833 ctcaaaattcaatttttaggttgatattttgatgttttcgtgt 875  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  12951012 ctcaaaattcaatttttaggttgatgttttgatgttttcgtgt 12951054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 235 - 862
Target Start/End: Original strand, 12936260 - 12936886
Alignment:
Q  235 aattgctttttt-atatagaaaacttcctattgacacaaataaatgaccaaattactcc-agcggtagttaactgtctctggcatatgcgtcggcagtta 332  Q
    |||||||||||| | || ||| ||||||||||||||||| |||||| ||||||||| || | ||||||||||| | |||||||||||||  |||||||||    
T  12936260 aattgcttttttgacattgaatacttcctattgacacaagtaaatgtccaaattacccccaacggtagttaacagcctctggcatatgcaccggcagtta 12936359  T
Q  333 attgccgctggctccttcagaggcagttaactgctgctggctttgatgttttttattatgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaa 432  Q
    | || ||||||||||| |||||||||||||| || |||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  12936360 actgtcgctggctcctccagaggcagttaaccgccgctggctttgctgctttttattatgattttacgcgtttcggtcgaaaaatcaaaataaatcgaaa 12936459  T
Q  433 cttattcggaattctacgaaactttacagaccctctatattttannnnnnnnagagatgtctgcaaaaaaccagatcaaaattcaatttctaagtcgacg 532  Q
    | ||||| |||||||| ||||||||||||||||||||||| |          |||| ||||||||||||||||||||||||||||||||||| |||||||    
T  12936460 catattcagaattctatgaaactttacagaccctctatatat--atttttttagagctgtctgcaaaaaaccagatcaaaattcaatttctaggtcgacg 12936557  T
Q  533 ttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatccgttctcgaaaaattctaattttttgcgggaaatgnnnnnnn 632  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||           
T  12936558 ttttgatattttggtttcttgagttattgacgcattaaaaattcatatttaatccatccgttgtcgaaaaattctaattttttgcgcgaaatgttttttt 12936657  T
Q  633 nnatgttcttaatatgtgtacnnnnnnnnnnnnnnnnnctcaacctctatataacttttccgggcacgtagttagaaaaatattgcaattttacgcgttt 732  Q
      |||||| ||| ||| ||||                  ||||| |||||||||||||||||| | ||||| |||||||||||||||||||||| |||||    
T  12936658 ttatgttcctaacatgggtacaaaaaataatgaaaaaattcaacttctatataacttttccggacgcgtaggtagaaaaatattgcaattttactcgttt 12936757  T
Q  733 tagtnnnnnnnntcaaaataaattgaggattactcgaaatactaagaaaatttgcagatcctctatatgtatttttatagaggtgtctgcnnnnnnncag 832  Q
     |||        |||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||||||||||       |||    
T  12936758 cagt-aaaaaaatcaaaagaaattgaggattactcgaaataccaagaaaatttgcaaatcctctatatgtattttaatagaggtgtctgcataaaaacag 12936856  T
Q  833 ctcaaaattcaatttttaggttgatatttt 862  Q
    ||||||||||||||||||||||||| ||||    
T  12936857 ctcaaaattcaatttttaggttgatgtttt 12936886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 215; E-Value: 1e-117
Query Start/End: Original strand, 230 - 625
Target Start/End: Original strand, 17644729 - 17645129
Alignment:
Q  230 aagaaaattgctttttt--atatagaaaacttcctattgacacaaataaatgaccaaattactccag-cggtagttaactgtctctggcatatgcgtcgg 326  Q
    |||||| ||||||||||  | |||||| ||||||||||||||||| ||||||| |||||||| || | ||||||||||||| |||||||||||||| ||     
T  17644729 aagaaagttgctttttttgacatagaatacttcctattgacacaagtaaatgatcaaattacccccgtcggtagttaactgcctctggcatatgcgccga 17644828  T
Q  327 cagttaattgccgctggctccttcagaggcagttaactgctgctggctttgatgttttttattatgattttacgcgtttcggtcaaaaaatcaaaataaa 426  Q
    ||||||| |||||||||||||| |||| |||||||||||| |||| ||||| || |||||||||||||| |||||||||| ||| |||||||||||||||    
T  17644829 cagttaactgccgctggctcctccagaagcagttaactgccgctgcctttgctgctttttattatgattctacgcgtttcagtcgaaaaatcaaaataaa 17644928  T
Q  427 tcgaaacttattcggaattctacgaaactttacagaccctctatattttannnnnnnnagagatgtctgcaaaaaaccagatcaaaattcaatttctaag 526  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||| |          |||| | || |||||||||||||||||||||||||||| | |    
T  17644929 tcgaaacttattcagaattctacgaaactttacagaccctctctatatatatatttttagagctatcggcaaaaaaccagatcaaaattcaatttcaagg 17645028  T
Q  527 tcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatccgttctcgaaaaattctaatttt--ttgcgggaaat 624  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||    
T  17645029 tcgacgttttgatgttttggtttctagagttataggcgcattaaaaattcatatttaatccatccgttatcgaaaaattctaatttttcttgcgggaaat 17645128  T
Q  625 g 625  Q
    |    
T  17645129 g 17645129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 228 - 653
Target Start/End: Original strand, 22964663 - 22965088
Alignment:
Q  228 ttaagaaaattgctttttt-atatagaaaacttcctattgacacaaataaatgaccaaatta-ctccagcggtagttaactgtctctggcatatgcgtcg 325  Q
    ||||||||||||||||||| | || ||| |||||||||||||| || ||||||||||||||| ||||| ||||||||||||  |||| ||||||||| ||    
T  22964663 ttaagaaaattgcttttttgacattgaatacttcctattgacataagtaaatgaccaaattacctcca-cggtagttaacttcctcttgcatatgcgccg 22964761  T
Q  326 gcagttaattgccgctggctccttcagaggcagttaactgctgctggctttgatgttttttattatgattttacgcgtttcggtcaaaaaatcaaaataa 425  Q
    | |||||| |||||||||||||| |||||| ||||||||||  ||||||||| || |||||||| ||||||||| |||||||||| ||||||||||||||    
T  22964762 ggagttaactgccgctggctcctccagaggtagttaactgcctctggctttgctgctttttattgtgattttacacgtttcggtcgaaaaatcaaaataa 22964861  T
Q  426 atcgaaacttattcggaattctacgaaactttacagaccctctatattttannnnnnnnagagatgtctgcaaaaaaccagatcaaaattcaatttctaa 525  Q
    ||||||| |||||| ||||| |||| |||||||||||||||||||| | ||        |||| |||||||||||||||| ||||||||||||||||||     
T  22964862 atcgaaaattattcagaattatacgtaactttacagaccctctata-tatattttttttagagttgtctgcaaaaaaccatatcaaaattcaatttctag 22964960  T
Q  526 gtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatccgttctcgaaaaattctaattttttgcgggaaatg 625  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| | ||||||||||||||||||| | ||||||    
T  22964961 gtcgacgttttgatgttttggtttcttgagttattgacgcattaaaaattcatatttaatccatccgttgttgaaaaattctaattttttgtgagaaatg 22965060  T
Q  626 nnnnnnnnnatgttcttaatatgtgtac 653  Q
             |||||||||||||||||||    
T  22965061 ttttttttcatgttcttaatatgtgtac 22965088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 205; E-Value: 1e-111
Query Start/End: Original strand, 256 - 862
Target Start/End: Complemental strand, 42057588 - 42057006
Alignment:
Q  256 acttcctattgacacaaataaatgaccaaattact-ccagcggtagttaactgtctctggcatatgcgtcggcagttaattgccgctggctccttcagag 354  Q
    ||||| |||||| |||| ||||||| ||||||||| ||| || |||||||||| |||||||||||| | || ||||||| ||||||| |||||| |||||    
T  42057588 acttcttattgaaacaagtaaatgatcaaattacttccatcgatagttaactgcctctggcatatgagccgacagttaactgccgcttgctcctccagag 42057489  T
Q  355 gcagttaactgctgctggctttgatgttttttattatgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaac 454  Q
                   |||||||| ||||||||||| |||||||||||||||||||  |||||| ||||||||||||||||||||| ||||||||||||||    
T  42057488 ---------------tggctttgctgttttttattgtgattttacgcgtttcggttgaaaaattaaaataaatcgaaacttattcagaattctacgaaac 42057404  T
Q  455 tttacagaccctctatattttannnnnnnnagagatgtctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttga 554  Q
    ||||| |||||||||||| | |        |||| ||| ||||||||||||||||||||| ||||||||| |||||        ||||||||||||||||    
T  42057403 tttactgaccctctatatataatttttt--agagctgtgtgcaaaaaaccagatcaaaatacaatttctaggtcga--------tgttttggtttcttga 42057314  T
Q  555 gttatcggcgcattaaaaattcatatttaatccatccgttctcgaaaaattctaattttttgcgggaaatgnnnnnnnnnatgttcttaatatgtgtacn 654  Q
    ||||| | |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||         |||||||||||||||||||     
T  42057313 gttattgacgcattaaaaattcatatttaatccatccgttgtcgacaaattctaattttttgcgggaaatgtttttttttatgttcttaatatgtgtacc 42057214  T
Q  655 nnnnnnnnnnnnnnnnctcaacctctatataacttttccgggcacgtagttagaaaaatattgcaattttacgcgttttagtnnnnnnnntcaaaataaa 754  Q
                     |||||||||||||||||||||||| |||||||||| |||||||||||||||| | |||||| |||        ||||||||||    
T  42057213 aaaataatgaaaaaaattcaacctctatataacttttccggacacgtagttaaaaaaatattgcaatttaatgcgtttcagtaaaaaaaatcaaaataaa 42057114  T
Q  755 ttgaggattactcgaaatactaagaaaatttgcagatcctctatatgtatttttatagaggtgtctgcnnnnnnncagctcaaaattcaatttttaggtt 854  Q
    ||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||       |||||||||||| ||||||||||||    
T  42057113 ttgagaattactcgaaatactaagaaaatttagagatcctctatatgtatttttatagaggtgtctgcaaaaaaacagctcaaaatttaatttttaggtt 42057014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 265 - 862
Target Start/End: Complemental strand, 27809810 - 27809208
Alignment:
Q  265 tgacacaaataaatgaccaaattactccag-cggtagttaactgtctctggcatatgcgtcggcagttaattgccgctggctccttcagaggcagttaac 363  Q
    |||||||| ||||||| |||||||| || | ||||||||||||| ||||||||||| |  | |||||||| |||| |||||| || ||||| |||||||     
T  27809810 tgacacaagtaaatgatcaaattacccccgacggtagttaactgcctctggcatatccagcagcagttaactgccactggctactccagagacagttaat 27809711  T
Q  364 tgctgctggctttgatgtttttta------------ttatgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacga 451  Q
    ||    |||||||| || ||||||            || | ||||||||||||| |||| ||||||||||||||||| |||||||||| |||||||||||    
T  27809710 tgtctttggctttgctgctttttaatgcaattttagttgtaattttacgcgttttggtcgaaaaatcaaaataaatcaaaacttattcagaattctacga 27809611  T
Q  452 aactttacagaccctctatattttannnnnnnnagagatgtctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttct 551  Q
    |||||||| |||||||||||| |          |||| ||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  27809610 aactttaccgaccctctatatat--atttttttagagctgtctgcaaaaaatcagctcaaaattcaatttctaggtcgacgttttgatgttttggtttct 27809513  T
Q  552 tgagttatcggcgcattaaaaattcatatttaatccatccgttctcgaaaaattctaattttttgcgggaaatgnnnnnnnnnatgttcttaatatgtgt 651  Q
    |||||||| ||||||| ||||||||||||||||| |||| ||| |||||||||||||||||||||| ||||||          |||||||||||||||||    
T  27809512 tgagttattggcgcatcaaaaattcatatttaatgcatctgttatcgaaaaattctaattttttgc-ggaaat--atttttgtatgttcttaatatgtgt 27809416  T
Q  652 acnnnnnnnnnnnnnnnnnctcaacctctatataacttttccgggcacgtagttagaaaaatattgcaattttacgcgttttagtnnnnnnnntcaaaat 751  Q
     |                  |||||||||  ||||||||||||| | |  ||||  |||||||||||||||||||| |||| |||        ||||| |    
T  27809415 gcaaaaaataatgaaaaaattcaacctct--ataacttttccggacgcacagttgaaaaaatattgcaattttacgtgtttcagt-aaaaaattcaaatt 27809319  T
Q  752 aaattgaggattactcgaaatactaagaaaatttgcagatcctctatatgtatttttatagaggtgtctgcnnnnnnncagctcaaaattcaatttttag 851  Q
    ||||||||||||| || |||||||||||||| || | ||||||||||||||| |||||||||||| |||||       ||| |||||||||||||||||     
T  27809318 aaattgaggattagtcaaaatactaagaaaaatttccgatcctctatatgtaattttatagaggtatctgcaaaaaaacagatcaaaattcaatttttaa 27809219  T
Q  852 gttgatatttt 862  Q
    |||||| ||||    
T  27809218 gttgatgtttt 27809208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 231 - 463
Target Start/End: Original strand, 16930210 - 16930441
Alignment:
Q  231 agaaaattgctttttt-atatagaaaacttcctattgacacaaataaatgaccaaattactccagcggtagttaactgtctctggcatatgcgtcggcag 329  Q
    ||||||||||||||   |||||||||||||||||||||||||| ||||||| |||||||| |||||| || ||||||||||||||||| |||| ||||||    
T  16930210 agaaaattgcttttcagatatagaaaacttcctattgacacaagtaaatgatcaaattaccccagcg-taattaactgtctctggcatgtgcgccggcag 16930308  T
Q  330 ttaattgccgctggctccttcagaggcagttaactgctgctggctttgatgttttttattatgattttacgcgtttcggtcaaaaaatcaaaataaatcg 429  Q
    |||| ||||||| || ||| | || |||||||||||| |||||||||| || ||||||||| |||||||||||||||||| | |||||||||||||| ||    
T  16930309 ttaactgccgctagcacctccggatgcagttaactgccgctggctttgctgctttttattaagattttacgcgtttcggt-agaaaatcaaaataaaccg 16930407  T
Q  430 aaacttattcggaattctacgaaactttacagac 463  Q
    ||| |||||  |||||||||||||||||||||||    
T  16930408 aaagttattaagaattctacgaaactttacagac 16930441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 391 - 625
Target Start/End: Complemental strand, 30471333 - 30471101
Alignment:
Q  391 tgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagaccctctatattttannnnnnnnagagat 490  Q
    |||||||||||||||||||| |||||||||||||||| ||| |||||| ||||||| | |||| |||||||||||||||||| |          |||| |    
T  30471333 tgattttacgcgtttcggtcgaaaaatcaaaataaattgaagcttatttggaattccatgaaaatttacagaccctctatatgt--atttttatagagtt 30471236  T
Q  491 gtctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatc 590  Q
    || ||||||||||||  |||||||||||||||||||||||  |||||||||||| |||||||||||| | ||||||||||||||||||| ||||||||||    
T  30471235 gtgtgcaaaaaaccaactcaaaattcaatttctaagtcgatcttttgatgttttagtttcttgagtttttggcgcattaaaaattcataattaatccatc 30471136  T
Q  591 cgttctcgaaaaattctaattttttgcgggaaatg 625  Q
    |||| ||| ||||||||||||||||| ||||||||    
T  30471135 cgttgtcggaaaattctaattttttgtgggaaatg 30471101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 232 - 471
Target Start/End: Original strand, 42056406 - 42056648
Alignment:
Q  232 gaaaattgctttttt-atatagaaaacttcctattgacacaaataaatgaccaaattactc-cagcggtagttaactgtctctggcatatgcgtcggcag 329  Q
    ||||||||||||||| | || ||| | || ||||||| |||| ||| |||| ||||||| | ||||||||| ||||||||| ||||||||||| ||||||    
T  42056406 gaaaattgcttttttgacattgaatattttctattgatacaagtaactgactaaattaccctcagcggtagctaactgtctttggcatatgcgccggcag 42056505  T
Q  330 ttaattgccgctggctccttcagaggcagttaactgctgctggctttgatgttttttattatgattttacgcgtttcggtcaaaaaatcaaaataaatcg 429  Q
    |||| |||||||||||||| |||||| |||||||||| || ||||||| || ||||||||||||||||||||||||| ||  ||||||||||||||||||    
T  42056506 ttaactgccgctggctcctccagaggtagttaactgccgccggctttgctgctttttattatgattttacgcgtttcagtagaaaaatcaaaataaatcg 42056605  T
Q  430 aaacttattcggaattctacgaaactttacagac-cctctata 471  Q
    ||| ||| |  ||||||||||||||||||||||| ||||||||    
T  42056606 aaagttacttagaattctacgaaactttacagacacctctata 42056648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 232 - 445
Target Start/End: Complemental strand, 2401800 - 2401586
Alignment:
Q  232 gaaaattgctttttt-atatagaaaacttcctattgacacaaataaatgaccaaattactccagcggtagttaactgtctctggcatatgcgtcggcagt 330  Q
    ||||||||||||||| | || ||| ||||| | ||||||||| |||||||||||||||| ||||||||||||||||| |  || |||||||| || ||||    
T  2401800 gaaaattgcttttttgacattgaatacttcttgttgacacaactaaatgaccaaattaccccagcggtagttaactgccgttgacatatgcgccgacagt 2401701  T
Q  331 taattgccgctggctccttcagaggcagttaactgctgctggctttgatgttttttattatgattttacgcgtttcggtcaaaaaatcaaaataaatcga 430  Q
    ||||||||| |||||||| ||||||||| |||||||  || |||||| || ||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  2401700 taattgccgttggctcctccagaggcagctaactgcctctagctttgctgctttttattatgattttatgcgtttcggtcgaaaaatcaaaataaatcga 2401601  T
Q  431 aacttattcggaatt 445  Q
    || |||||| |||||    
T  2401600 aatttattcagaatt 2401586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 373 - 621
Target Start/End: Original strand, 8213581 - 8213827
Alignment:
Q  373 ctttgatgttttttattatgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagaccctctatat 472  Q
    ||||| || ||||||| ||||||||| || |||||||| |||||| ||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  8213581 ctttgctgctttttataatgattttatgcttttcggtcgaaaaattaaaataaatcgaaacttattcagaattctacgaaactttacagaccatctatat 8213680  T
Q  473 tttannnnnnnnagagatgtctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaa 572  Q
     |          |||| |||||||||| || ||| |||||||||||||| || || || ||||||||||||| || |||| | || | ||||| ||||||    
T  8213681 at--atttttttagagttgtctgcaaataaacagctcaaaattcaatttttaggttgatgttttgatgttttcgtgtcttaaattttaggcgcgttaaaa 8213778  T
Q  573 attcatatttaatccatccgttctcgaaaaattctaattttttgcggga 621  Q
    ||||||||||||||| ||| || ||||||||||| ||||||||| ||||    
T  8213779 attcatatttaatccgtcccttgtcgaaaaattccaattttttgtggga 8213827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 391 - 624
Target Start/End: Complemental strand, 28109470 - 28109247
Alignment:
Q  391 tgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagaccctctatattttannnnnnnnagagat 490  Q
    |||||||||| ||||||||| |||||||||||||||||||| ||||||  |||| ||||||||||||||||||||||||||| |          ||||||    
T  28109470 tgattttacgtgtttcggtcgaaaaatcaaaataaatcgaagcttatttagaatgctacgaaactttacagaccctctatatgt--atttttatagagat 28109373  T
Q  491 gtctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatc 590  Q
    || ||||||| ||||| ||||||||||||||||| |||        ||||||||| ||||||||||| | ||| |||||||| |||||||||||||||||    
T  28109372 gtttgcaaaacaccagctcaaaattcaatttctaggtc--------gatgttttgatttcttgagtttttggcacattaaaagttcatatttaatccatc 28109281  T
Q  591 cgttctcgaaaaattctaattttttgcgggaaat 624  Q
    |||| ||| ||||||||||||||||| |||||||    
T  28109280 cgttgtcggaaaattctaattttttgtgggaaat 28109247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 485 - 619
Target Start/End: Original strand, 21038237 - 21038370
Alignment:
Q  485 agagatgtctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaa 584  Q
    |||| |||||||||||| || | ||||||||||||||||| ||||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||    
T  21038237 agagttgtctgcaaaaa-cctggtcaaaattcaatttctatgtcgacgttttgatgttttggttacttgagttattgacgcattaaaaattcatatttaa 21038335  T
Q  585 tccatccgttctcgaaaaattctaattttttgcgg 619  Q
    ||| |||||| ||||||||||||||||||||||||    
T  21038336 tccttccgttgtcgaaaaattctaattttttgcgg 21038370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 232 - 471
Target Start/End: Complemental strand, 22965822 - 22965592
Alignment:
Q  232 gaaaattgctttttt-atatagaaaacttcctattgacacaaataaatgaccaaattactcc-agcggtagttaactgtctctggcatatgcgtcggcag 329  Q
    ||||||||||||||| | || ||| ||||||||||||||||| ||||||| ||||||||||| | ||||||||||||| ||||||||| |||| ||| ||    
T  22965822 gaaaattgcttttttgacattgaatacttcctattgacacaagtaaatgatcaaattactcccatcggtagttaactgcctctggcat-tgcgccggtag 22965724  T
Q  330 ttaattgccgctggctccttcagaggcagttaactgctgctggctttgatgttttttattatgattttacgcgtttcggtcaaaaaatcaaaataaatcg 429  Q
    |||| ||  |||||||||| ||||||||||           |||||||    ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  22965723 ttaactgatgctggctcctccagaggcagt-----------ggctttgccactttttattatgattttacgcgtttcggtcgaaaaatcaaaataaatcg 22965635  T
Q  430 aaacttattcggaattctacgaaactttacagac-cctctata 471  Q
    ||| |||||| |||||||||||||||||| |||| ||||||||    
T  22965634 aaagttattcagaattctacgaaactttatagacacctctata 22965592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 354 - 471
Target Start/End: Complemental strand, 12951587 - 12951469
Alignment:
Q  354 ggcagttaactgctgctggctttgatgttttttattatgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaa 453  Q
    ||||||||||||| ||| |||||| ||||||||||||||||||||||| |||||||  ||||||||||||||||||||| |||||| |||||||||||||    
T  12951587 ggcagttaactgccgctagctttgctgttttttattatgattttacgcatttcggtagaaaaatcaaaataaatcgaaatttattcagaattctacgaaa 12951488  T
Q  454 ctttacagac-cctctata 471  Q
    |||||||||| ||||||||    
T  12951487 ctttacagacacctctata 12951469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 354 - 471
Target Start/End: Complemental strand, 12937424 - 12937306
Alignment:
Q  354 ggcagttaactgctgctggctttgatgttttttattatgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaa 453  Q
    ||||||||||||| ||| |||||| ||||||||||||||||||||||| |||||||  ||||||||||||||||||||| |||||| |||||||| ||||    
T  12937424 ggcagttaactgccgctagctttgctgttttttattatgattttacgcatttcggtagaaaaatcaaaataaatcgaaatttattcagaattctatgaaa 12937325  T
Q  454 ctttacagac-cctctata 471  Q
    |||||||||| ||||||||    
T  12937324 ctttacagacacctctata 12937306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 373 - 463
Target Start/End: Complemental strand, 8214268 - 8214178
Alignment:
Q  373 ctttgatgttttttattatgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagac 463  Q
    ||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  8214268 ctttgctgctttttattatgattttacgcgtttcggtcgaaaaatcaaaataaatcgaaagttattcagaattctacgaaactttacagac 8214178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 230 - 359
Target Start/End: Original strand, 39939959 - 39940089
Alignment:
Q  230 aagaaaattgctttttt-atatagaaaacttcctattgacacaaataaatgaccaaatta-ctccagcggtagttaactgtctctggcatatgcgtcggc 327  Q
    |||||||||| |||||| | || ||| ||||||||||||||||| ||||||||||||||| ||||| ||||||||||||| |||||||||||||| ||||    
T  39939959 aagaaaattgtttttttgacattgaatacttcctattgacacaagtaaatgaccaaattacctcca-cggtagttaactgcctctggcatatgcgccggc 39940057  T
Q  328 agttaattgccgctggctccttcagaggcagt 359  Q
    |||||| |||||||| ||||| ||||||||||    
T  39940058 agttaactgccgctgactcctccagaggcagt 39940089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 672 - 798
Target Start/End: Original strand, 17645177 - 17645302
Alignment:
Q  672 tcaacctctatataacttttccgggcacgtagttagaaaaatattgcaattttacgcgttttagtnnnnnnnntcaaaataaattgaggattactcgaaa 771  Q
    |||| ||||||||||||||| ||||   | ||||||||||||||||||||||||||||||| |||        ||||||||||||||||||||||| |||    
T  17645177 tcaaactctatataacttttacgggtgtgcagttagaaaaatattgcaattttacgcgtttcagtaaaaaaa-tcaaaataaattgaggattactcaaaa 17645275  T
Q  772 tactaagaaaatttgcagatcctctat 798  Q
    |||||||||||||||||||||||||||    
T  17645276 tactaagaaaatttgcagatcctctat 17645302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 386 - 460
Target Start/End: Original strand, 39940089 - 39940163
Alignment:
Q  386 tattatgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttaca 460  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| |||||| || |||||||||||||||||    
T  39940089 tattatgattttacgtgtttcggtcaaaaaatcaaaataaatcgaaaattattcagagttctacgaaactttaca 39940163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 354 - 472
Target Start/End: Complemental strand, 2899049 - 2898930
Alignment:
Q  354 ggcagttaactgctgctggctttgatgttttttattatgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaa 453  Q
    ||||||||||||| |||| ||||| || |||||||||||||||||||| ||| |||  ||||||||||||||||||| ||||| ||| ||| ||| ||||    
T  2899049 ggcagttaactgccgctgactttgctgctttttattatgattttacgcattttggtagaaaaatcaaaataaatcgagacttagtcgaaatgctatgaaa 2898950  T
Q  454 ctttacagac-cctctatat 472  Q
    ||||| |||| |||||||||    
T  2898949 ctttatagacacctctatat 2898930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 258 - 342
Target Start/End: Complemental strand, 2899117 - 2899032
Alignment:
Q  258 ttcctattgacacaaataaatgaccaaatta-ctccagcggtagttaactgtctctggcatatgcgtcggcagttaattgccgctg 342  Q
    ||||||||||||||| ||||||| ||||||| | |||||||||||||| |||||||||||||| ||||||||||||| ||||||||    
T  2899117 ttcctattgacacaagtaaatgatcaaattatccccagcggtagttaaatgtctctggcatatacgtcggcagttaactgccgctg 2899032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 745 - 822
Target Start/End: Complemental strand, 28109124 - 28109047
Alignment:
Q  745 tcaaaataaattgaggattactcgaaatactaagaaaatttgcagatcctctatatgtatttttatagaggtgtctgc 822  Q
    |||||||||||||||| ||| ||||||| ||| | ||||||||||||||||||||||||||||||||||||| |||||    
T  28109124 tcaaaataaattgaggtttagtcgaaattctatgtaaatttgcagatcctctatatgtatttttatagaggtatctgc 28109047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 265 - 463
Target Start/End: Original strand, 27808590 - 27808784
Alignment:
Q  265 tgacacaaataaatgaccaaattactc-cagcggtagttaactgtctctggcatatgcgtcggcagttaattgccgctggctccttcagaggcagttaac 363  Q
    |||||||||||||||| |||||||||  ||| ||||||| |||| || |||||||| || | ||||||||||||||||||||| | | ||||||||||||    
T  27808590 tgacacaaataaatgatcaaattactttcagtggtagttcactgcctttggcatatccggcagcagttaattgccgctggctcatccggaggcagttaac 27808689  T
Q  364 tgctgctggctttgatgt----tttttattatgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttac 459  Q
    |||||||   ||| | ||    ||    || ||||||||||||||||||||  |||||||||||     ||||||||||| |||||||||||||||||||    
T  27808690 tgctgct---tttta-gtccagttccagttgtgattttacgcgtttcggtcttaaaatcaaaat-----gaaacttattcagaattctacgaaactttac 27808780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 672 - 820
Target Start/End: Original strand, 21038421 - 21038564
Alignment:
Q  672 tcaacctctatataacttttccgggcacgtagttagaaaaatattgcaattttacgcgttttagtnnnnnnnntcaaaataaattgaggattactcgaaa 771  Q
    ||||||||||||||||||||| || | || |||| |||||||||||| ||||||| ||||| |||        |||||||||||||||||||| | ||||    
T  21038421 tcaacctctatataacttttctggacgcgcagttggaaaaatattgcgattttacacgtttgagtaaaaaat-tcaaaataaattgaggattagttgaaa 21038519  T
Q  772 tactaagaaaatttgcagatcctctatatgtatttttatagaggtgtct 820  Q
    || || ||||||||||| ||||||    |||||||||||||||||||||    
T  21038520 taatacgaaaatttgcatatcctc----tgtatttttatagaggtgtct 21038564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 256 - 341
Target Start/End: Complemental strand, 12937493 - 12937408
Alignment:
Q  256 acttcctattgacacaaataaatgaccaaattactccagcggtagttaactgtctctggcatatgcgtcggcagttaattgccgct 341  Q
    ||||| |||||| |||| |||||||  ||||||| ||| |||||||||||||||||||||||||||| |||||||||| |||||||    
T  12937493 acttcttattgatacaagtaaatgataaaattaccccaacggtagttaactgtctctggcatatgcgccggcagttaactgccgct 12937408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 485 - 621
Target Start/End: Original strand, 12950990 - 12951126
Alignment:
Q  485 agagatgtctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaa 584  Q
    |||| |||||||| |||| ||| |||||||||||||| || || || ||||||||||||| || |||| | || | ||||| | ||||||||||||||||    
T  12950990 agaggtgtctgcataaaaacagctcaaaattcaatttttaggttgatgttttgatgttttcgtgtcttaaattttaggcgcgtgaaaaattcatatttaa 12951089  T
Q  585 tccatccgttctcgaaaaattctaattttttgcggga 621  Q
    ||| ||| || ||||||||||  ||||||||| ||||    
T  12951090 tccgtcccttgtcgaaaaattaaaattttttgtggga 12951126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 485 - 616
Target Start/End: Complemental strand, 16930752 - 16930621
Alignment:
Q  485 agagatgtctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaa 584  Q
    |||| ||||||||||||| ||| | |||||||||||| || || || ||||||||||||| || |||| | || | ||||| ||||||||||||||||||    
T  16930752 agaggtgtctgcaaaaaaacagctaaaaattcaatttttaggttgatgttttgatgttttcgtgtcttaaattttaggcgcgttaaaaattcatatttaa 16930653  T
Q  585 tccatccgttctcgaaaaattctaattttttg 616  Q
    | | ||| || ||||||||||  |||||||||    
T  16930652 ttcgtcccttgtcgaaaaatttaaattttttg 16930621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 745 - 822
Target Start/End: Original strand, 41473012 - 41473089
Alignment:
Q  745 tcaaaataaattgaggattactcgaaatactaagaaaatttgcagatcctctatatgtatttttatagaggtgtctgc 822  Q
    |||||||| ||||||| ||| || |||||||  | |||||||||||||||||||||||||||||||||||| ||||||    
T  41473012 tcaaaatagattgaggcttattcaaaatactgtgtaaatttgcagatcctctatatgtatttttatagaggagtctgc 41473089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 794 - 875
Target Start/End: Original strand, 8213674 - 8213755
Alignment:
Q  794 tctatatgtatttttatagaggtgtctgcnnnnnnncagctcaaaattcaatttttaggttgatattttgatgttttcgtgt 875  Q
    ||||||| ||||||| ||||| |||||||       |||||||||||||||||||||||||||| |||||||||||||||||    
T  8213674 tctatatatatttttttagagttgtctgcaaataaacagctcaaaattcaatttttaggttgatgttttgatgttttcgtgt 8213755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 391 - 463
Target Start/End: Complemental strand, 21039026 - 21038954
Alignment:
Q  391 tgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagac 463  Q
    |||||||||||||||||||  ||||||||||||||||| |||||||||| ||||| ||||||| |||| ||||    
T  21039026 tgattttacgcgtttcggttgaaaaatcaaaataaatcaaaacttattcagaattatacgaaattttatagac 21038954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 745 - 862
Target Start/End: Original strand, 41476991 - 41477108
Alignment:
Q  745 tcaaaataaattgaggattactcgaaatactaagaaaatttgcagatcctctatatgtatttttatagaggtgtctgcnnnnnnncagctcaaaattcaa 844  Q
    |||| ||| ||||||| ||| || |||||||  | |||||||||||||||||||||||||||||||||||||| ||||       ||  |||||||||||    
T  41476991 tcaacatagattgaggcttattcaaaatactgtgtaaatttgcagatcctctatatgtatttttatagaggtgactgcaaaaaaacatttcaaaattcaa 41477090  T
Q  845 tttttaggttgatatttt 862  Q
    ||| ||||||||| ||||    
T  41477091 tttctaggttgatgtttt 41477108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 382 - 453
Target Start/End: Complemental strand, 17646609 - 17646538
Alignment:
Q  382 tttttattatgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaa 453  Q
    ||||||||||||||||||| ||||  ||  ||||||||||||||||||||| |||||| |||||||||||||    
T  17646609 tttttattatgattttacgtgttttagtagaaaaatcaaaataaatcgaaagttattcagaattctacgaaa 17646538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 232 - 313
Target Start/End: Complemental strand, 8214365 - 8214283
Alignment:
Q  232 gaaaattgctttttt-atatagaaaacttcctattgacacaaataaatgaccaaattactccagcggtagttaactgtctctg 313  Q
    ||||||||||||||| | || ||| ||||||||||||||||| |||||||||||||||| ||| || |||||||||| |||||    
T  8214365 gaaaattgcttttttgacattgaatacttcctattgacacaagtaaatgaccaaattaccccaacgatagttaactgcctctg 8214283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 256 - 341
Target Start/End: Complemental strand, 12951656 - 12951571
Alignment:
Q  256 acttcctattgacacaaataaatgaccaaattactccagcggtagttaactgtctctggcatatgcgtcggcagttaattgccgct 341  Q
    |||||||||||| | || |||||||  |||||||  || ||||||||||||| |||||||||||||| |||||||||| |||||||    
T  12951656 acttcctattgatataagtaaatgataaaattacctcaacggtagttaactgcctctggcatatgcgccggcagttaactgccgct 12951571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 404 - 471
Target Start/End: Complemental strand, 18966723 - 18966655
Alignment:
Q  404 ttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagac-cctctata 471  Q
    ||||||| ||||||||||||||||||| ||||| ||||||| |||| ||||||||||||| ||||||||    
T  18966723 ttcggtcgaaaaatcaaaataaatcgagacttagtcggaatgctacaaaactttacagacacctctata 18966655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 391 - 435
Target Start/End: Original strand, 21038119 - 21038163
Alignment:
Q  391 tgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaactt 435  Q
    ||||||||||| |||||||||||||||||||||||||||||||||    
T  21038119 tgattttacgcatttcggtcaaaaaatcaaaataaatcgaaactt 21038163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 520 - 591
Target Start/End: Original strand, 42036074 - 42036145
Alignment:
Q  520 ttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatcc 591  Q
    ||||| ||||| |||||||  ||||||||||||||||| | ||||||||||||| ||||||||||| |||||    
T  42036074 ttctaggtcgatgttttgaaattttggtttcttgagtttttggcgcattaaaaaatcatatttaattcatcc 42036145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 535 - 621
Target Start/End: Original strand, 12936877 - 12936963
Alignment:
Q  535 ttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatccgttctcgaaaaattctaattttttgcggga 621  Q
    |||||||||| || |||| | || | ||||| ||||||||||||||||||||| ||| || ||||||||||| ||||||||| ||||    
T  12936877 ttgatgtttttgtgtcttaaattttaggcgcgttaaaaattcatatttaatccgtcccttgtcgaaaaattcaaattttttgtggga 12936963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 795 - 862
Target Start/End: Original strand, 17646037 - 17646104
Alignment:
Q  795 ctatatgtatttttatagaggtgtctgcnnnnnnncagctcaaaattcaatttttaggttgatatttt 862  Q
    ||||||||||||||||||||||||||||       || ||||||||||||||||||||||||| ||||    
T  17646037 ctatatgtatttttatagaggtgtctgcaaaaaaacaactcaaaattcaatttttaggttgatgtttt 17646104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 404 - 472
Target Start/End: Complemental strand, 16930528 - 16930459
Alignment:
Q  404 ttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagac-cctctatat 472  Q
    ||||||| ||||||||||||||||||| ||||| ||| ||| ||||||||||||| |||| |||||||||    
T  16930528 ttcggtcgaaaaatcaaaataaatcgagacttagtcgaaatgctacgaaactttagagacacctctatat 16930459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 404 - 472
Target Start/End: Original strand, 17646288 - 17646357
Alignment:
Q  404 ttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagac-cctctatat 472  Q
    ||||||| ||||||||||||||||||| ||||| ||| ||| ||||||||||||| |||| |||||||||    
T  17646288 ttcggtcgaaaaatcaaaataaatcgacacttagtcgaaatgctacgaaactttatagacacctctatat 17646357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 745 - 814
Target Start/End: Complemental strand, 18966995 - 18966926
Alignment:
Q  745 tcaaaataaattgaggattactcgaaatactaagaaaatttgcagatcctctatatgtatttttatagag 814  Q
    ||||||||||| |||| ||| | | |||||||||||| ||| ||||||||||||||||||||||| ||||    
T  18966995 tcaaaataaatcgagggttatttggaatactaagaaactttacagatcctctatatgtatttttacagag 18966926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 391 - 472
Target Start/End: Complemental strand, 18967020 - 18966940
Alignment:
Q  391 tgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagaccctctatat 472  Q
    ||||||||| |||||||||| |||| ||||||||||||||   ||||| ||||| ||| ||||||||||||| |||||||||    
T  18967020 tgattttactcgtttcggtcgaaaa-tcaaaataaatcgagggttatttggaatactaagaaactttacagatcctctatat 18966940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 391 - 472
Target Start/End: Original strand, 31064524 - 31064605
Alignment:
Q  391 tgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagaccctctatat 472  Q
    ||||||| || |||||| | ||||||||||||||||||||   ||||||||||| |||| ||||||| ||||||| ||||||    
T  31064524 tgattttgcgtgtttcgataaaaaaatcaaaataaatcgatgtttattcggaatgctacaaaactttgcagacccactatat 31064605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 535 - 616
Target Start/End: Original strand, 41473119 - 41473200
Alignment:
Q  535 ttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatccgttctcgaaaaattctaattttttg 616  Q
    |||||||||| || || |||||| | ||||| ||||||||||||||||||||| | | || ||||||||||| |||||||||    
T  41473119 ttgatgttttagtgtcatgagttttaggcgcgttaaaaattcatatttaatccgttctttgtcgaaaaattcaaattttttg 41473200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 232 - 306
Target Start/End: Complemental strand, 17646685 - 17646609
Alignment:
Q  232 gaaaattgctttttt-atatagaaaacttcctattgacacaaataaatgaccaaatta-ctccagcggtagttaact 306  Q
    ||||||||||||| | | |||||| ||||||| ||||||||| ||||||||||||||| | ||||||||||||||||    
T  17646685 gaaaattgcttttctgacatagaatacttcctgttgacacaagtaaatgaccaaattacccccagcggtagttaact 17646609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 492 - 621
Target Start/End: Complemental strand, 27809252 - 27809131
Alignment:
Q  492 tctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatcc 591  Q
    ||||||||||| |||||||||||||||||| |||||        ||||||||| || |||| | || | ||||| |||||| |||||||||||||  | |    
T  27809252 tctgcaaaaaaacagatcaaaattcaatttttaagt--------tgatgttttcgtgtcttaaattttaggcgcgttaaaagttcatatttaatctgtac 27809161  T
Q  592 gttctcgaaaaattctaattttttgcggga 621  Q
     || ||||||||||| ||||||||||||||    
T  27809160 cttgtcgaaaaattcaaattttttgcggga 27809131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 745 - 870
Target Start/End: Complemental strand, 30471307 - 30471182
Alignment:
Q  745 tcaaaataaattgaggattactcgaaatactaagaaaatttgcagatcctctatatgtatttttatagaggtgtctgcnnnnnnncagctcaaaattcaa 844  Q
    |||||||||||||| | ||| | | ||| | | |||||||| |||| ||||||||||||||||||||||| ||| |||       || ||||||||||||    
T  30471307 tcaaaataaattgaagcttatttggaattccatgaaaatttacagaccctctatatgtatttttatagagttgtgtgcaaaaaaccaactcaaaattcaa 30471208  T
Q  845 tttttaggttgatattttgatgtttt 870  Q
    ||| || || ||| ||||||||||||    
T  30471207 tttctaagtcgatcttttgatgtttt 30471182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 537 - 616
Target Start/End: Complemental strand, 18966886 - 18966808
Alignment:
Q  537 gatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatccgttctcgaaaaattctaattttttg 616  Q
    ||||||||||||||||||||| | ||| ||| ||||||||||||||||||  | |||| ||| ||||||| |||||||||    
T  18966886 gatgttttggtttcttgagtttttggcacatcaaaaattcatatttaatctgttcgttgtcggaaaattc-aattttttg 18966808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 412 - 463
Target Start/End: Complemental strand, 28108805 - 28108754
Alignment:
Q  412 aaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagac 463  Q
    |||||||||||||||| || ||||| ||||||| ||||||||||||||||||    
T  28108805 aaaaatcaaaataaattgagacttaatcggaatgctacgaaactttacagac 28108754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 567 - 621
Target Start/End: Original strand, 17646127 - 17646181
Alignment:
Q  567 ttaaaaattcatatttaatccatccgttctcgaaaaattctaattttttgcggga 621  Q
    ||||||||||||||||||||| ||| || ||||||||||| ||||||||| ||||    
T  17646127 ttaaaaattcatatttaatccgtcccttgtcgaaaaattcaaattttttgtggga 17646181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 783 - 821
Target Start/End: Original strand, 18966630 - 18966668
Alignment:
Q  783 tttgcagatcctctatatgtatttttatagaggtgtctg 821  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  18966630 tttgcaaatcctctatatgtatttttatagaggtgtctg 18966668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 778 - 865
Target Start/End: Complemental strand, 28109411 - 28109324
Alignment:
Q  778 gaaaatttgcagatcctctatatgtatttttatagaggtgtctgcnnnnnnncagctcaaaattcaatttttaggttgatattttgat 865  Q
    |||| ||| |||| ||||||||||||||||||||||| ||| |||       |||||||||||||||||| ||||| ||| |||||||    
T  28109411 gaaactttacagaccctctatatgtatttttatagagatgtttgcaaaacaccagctcaaaattcaatttctaggtcgatgttttgat 28109324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 399 - 460
Target Start/End: Original strand, 10284102 - 10284163
Alignment:
Q  399 cgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttaca 460  Q
    |||||||| ||  |||||| ||||||||| ||||||||||| |||||| |||||||||||||    
T  10284102 cgcgtttcagttgaaaaataaaaataaattgaaacttattcagaattcaacgaaactttaca 10284163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 392 - 469
Target Start/End: Complemental strand, 21098439 - 21098362
Alignment:
Q  392 gattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagaccctcta 469  Q
    |||||| ||| |||||||| |||||||||||||||||||||| |  |||   |||||||||||||| |||| ||||||    
T  21098439 gattttgcgcatttcggtcgaaaaatcaaaataaatcgaaacgttgtcgattttctacgaaactttgcagatcctcta 21098362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 404 - 472
Target Start/End: Complemental strand, 42056881 - 42056812
Alignment:
Q  404 ttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagac-cctctatat 472  Q
    ||||||| |||||||||||||||| || ||||| ||| ||| ||||||||||||| |||| |||||||||    
T  42056881 ttcggtcgaaaaatcaaaataaattgagacttagtcgaaatgctacgaaactttatagacacctctatat 42056812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 535 - 615
Target Start/End: Original strand, 2898525 - 2898605
Alignment:
Q  535 ttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatccgttctcgaaaaattctaatttttt 615  Q
    |||||||||| || |||| | || | ||||| ||||||||||||||||||||| ||| || ||||||||||| || |||||    
T  2898525 ttgatgttttcgtgtcttaaattttaggcgcgttaaaaattcatatttaatccgtccattgtcgaaaaattcaaaattttt 2898605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 391 - 439
Target Start/End: Complemental strand, 6807840 - 6807792
Alignment:
Q  391 tgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattc 439  Q
    ||||||||||||||| |||  ||||||||||||||||||||| ||||||    
T  6807840 tgattttacgcgttttggttgaaaaatcaaaataaatcgaaatttattc 6807792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 404 - 460
Target Start/End: Original strand, 41473314 - 41473370
Alignment:
Q  404 ttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttaca 460  Q
    ||||||| |||||||||||||| |||| | ||| ||| |||||||||||||||||||    
T  41473314 ttcggtcgaaaaatcaaaataagtcgagatttagtcgaaattctacgaaactttaca 41473370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 412 - 463
Target Start/End: Original strand, 2898727 - 2898778
Alignment:
Q  412 aaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagac 463  Q
    ||||||||||||||||||| ||||| ||| ||| ||||||||||||| ||||    
T  2898727 aaaaatcaaaataaatcgagacttagtcgaaatgctacgaaactttatagac 2898778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 253 - 319
Target Start/End: Complemental strand, 6807986 - 6807919
Alignment:
Q  253 aaaacttcctattgacacaaataaatgaccaaatta-ctccagcggtagttaactgtctctggcatat 319  Q
    |||| ||| ||||||||||| ||||||| ||||||| | |||||||||||||| || |||||||||||    
T  6807986 aaaatttcatattgacacaagtaaatgatcaaattatcaccagcggtagttaattgcctctggcatat 6807919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 411 - 457
Target Start/End: Original strand, 12937237 - 12937283
Alignment:
Q  411 aaaaaatcaaaataaatcgaaacttattcggaattctacgaaacttt 457  Q
    ||||||| |||| |||||||||||||||||||||  |||||||||||    
T  12937237 aaaaaataaaaagaaatcgaaacttattcggaatgttacgaaacttt 12937283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 411 - 457
Target Start/End: Original strand, 12951400 - 12951446
Alignment:
Q  411 aaaaaatcaaaataaatcgaaacttattcggaattctacgaaacttt 457  Q
    ||||||| |||| |||||||||||||||||||||  |||||||||||    
T  12951400 aaaaaataaaaagaaatcgaaacttattcggaatgttacgaaacttt 12951446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 535 - 621
Target Start/End: Complemental strand, 28109007 - 28108921
Alignment:
Q  535 ttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatccgttctcgaaaaattctaattttttgcggga 621  Q
    ||||||||||  | ||||||||| | || || ||||||||||||||||||||| ||| || || |||||||| || |||||| ||||    
T  28109007 ttgatgtttttttgtcttgagttttaggtgcgttaaaaattcatatttaatccgtcccttgtcaaaaaattcaaaatttttgtggga 28108921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 535 - 621
Target Start/End: Complemental strand, 42057015 - 42056929
Alignment:
Q  535 ttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatccgttctcgaaaaattctaattttttgcggga 621  Q
    |||||||||| || |||| | || | ||||| ||||||||| ||||||||||| ||| || | ||||||||| ||||||||| ||||    
T  42057015 ttgatgttttcgtgtctttaattttaggcgcgttaaaaatttatatttaatccctcccttgttgaaaaattcaaattttttgtggga 42056929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 242 - 306
Target Start/End: Original strand, 8213478 - 8213543
Alignment:
Q  242 tttttatatagaaaacttcctattgacacaaataaatgaccaaatta-ctccagcggtagttaact 306  Q
    ||||||||| ||| | ||||||||||||||| ||||||| |||||||  | |||||||||||||||    
T  8213478 tttttatattgaatatttcctattgacacaagtaaatgatcaaattattttcagcggtagttaact 8213543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 792 - 870
Target Start/End: Complemental strand, 27809598 - 27809520
Alignment:
Q  792 cctctatatgtatttttatagaggtgtctgcnnnnnnncagctcaaaattcaatttttaggttgatattttgatgtttt 870  Q
    ||||||||| ||||||| ||||| |||||||       |||||||||||||||||| ||||| ||  ||||||||||||    
T  27809598 cctctatatatatttttttagagctgtctgcaaaaaatcagctcaaaattcaatttctaggtcgacgttttgatgtttt 27809520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 391 - 444
Target Start/End: Complemental strand, 30463619 - 30463566
Alignment:
Q  391 tgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaat 444  Q
    ||||||| | || ||||||||||||||||||||| ||||| ||||| |||||||    
T  30463619 tgattttgcacggttcggtcaaaaaatcaaaatatatcgagacttagtcggaat 30463566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 392 - 457
Target Start/End: Complemental strand, 42056736 - 42056671
Alignment:
Q  392 gattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaacttt 457  Q
    |||||| |||||||||||| |||||   ||| ||||||| |||||||||||||  |||||||||||    
T  42056736 gattttgcgcgtttcggtcgaaaaaaataaaaaaatcgagacttattcggaatgttacgaaacttt 42056671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 298; Significance: 1e-167; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 249 - 875
Target Start/End: Original strand, 34814497 - 34815121
Alignment:
Q  249 atagaaaacttcctattgacacaaataaatgaccaaattactcc-agcggtagttaactgtctctggcatatgcgtcggcagttaat---tgccgctggc 344  Q
    |||||| ||||||||||||||||| ||||||||||||||||||| | |||||||||||||||| ||||||||||| |||||||||||   ||||||||||    
T  34814497 atagaatacttcctattgacacaagtaaatgaccaaattactcccaacggtagttaactgtctttggcatatgcgccggcagttaataactgccgctggc 34814596  T
Q  345 tccttcagaggcagttaactgctgctggctttgatgttttttattatgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaat 444  Q
    |||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||    
T  34814597 tccttcagaggcagttaactgccgcttgctttgatgctttttattatgattttacgtgtttcggtcgaaaaatcaaaataaatcgaaacttattcagaat 34814696  T
Q  445 tctacgaaactttacagaccctctatattttannnnnnnnagagatgtctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgtttt 544  Q
    |||| ||||||||||||||||| || || |          |||| ||||| ||||||| || |||||||||||||||||| |||||||||||||||||||    
T  34814697 tctatgaaactttacagaccctataaatat--atttttttagagctgtctacaaaaaatcatatcaaaattcaatttctaggtcgacgttttgatgtttt 34814794  T
Q  545 ggtttcttgagttatcggcgcattaaaaattcatatttaatccatccgttctcgaaaaattctaattttttgcgggaaatgnnnnnnnnnatgttcttaa 644  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |          ||||||||||    
T  34814795 ggtttcttgagttattgacgcattaaaaattcatatttaatccatccgttgtcgaaaaattctaattttttgcgggaatt---tttttttatgttcttaa 34814891  T
Q  645 tatgtgtacnnnnnnnnnnnnnnnnnctcaacctctatataacttttccgggcacgtagttagaaaaatattgcaattttacgcgttttagtnnnnnnnn 744  Q
    | |||||||                  |||||||||||||||||||||||| | || ||||||||||||||| |||| |||||||||| |||            
T  34814892 tttgtgtacaaaaaataatgaaaaaattcaacctctatataacttttccggacgcgcagttagaaaaatattccaatgttacgcgtttcagt-aaaaaaa 34814990  T
Q  745 tcaaaataaattgaggattactcgaaatactaagaaaatttgcagatcctctatatgtatttttatagaggtgtctgcnnnnnnncagctcaaaattcaa 844  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||    
T  34814991 tcaaaataaattgaggattactcaaattactaagaaaatttgcagatcctctatatgtatttttatagaggtgtctgcaaaaaaacagctcaaaattcaa 34815090  T
Q  845 tttttaggttgatattttgatgttttcgtgt 875  Q
    ||||||||||||| |||||||||||||||||    
T  34815091 tttttaggttgatgttttgatgttttcgtgt 34815121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 279 - 871
Target Start/End: Original strand, 51935439 - 51936028
Alignment:
Q  279 gaccaaattactccagcggtagttaactgtctctggcatatgcgtcggcagttaattgccgctggctccttcagaggcagttaactgctgctggctttga 378  Q
    ||||||||||| ||| ||||||||| ||| ||||||||||||||||||||||||| ||||  |||||||| || |||||||||||||| ||||||||||     
T  51935439 gaccaaattaccccaacggtagttatctgcctctggcatatgcgtcggcagttaactgccattggctcctccaaaggcagttaactgccgctggctttgc 51935538  T
Q  379 tgttttttattatgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagaccctctatattttann 478  Q
    || ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||  |||||||| ||       
T  51935539 tgctttttattatgattttacgcgtttcggtcgaaaaatcaaaataaatcgaaacttattcagaattttacgaaactttacagaatctctatatatt--t 51935636  T
Q  479 nnnnnnagagatgtctgc-aaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattca 577  Q
          |||| ||||||| ||||||  |||||||||||||||||||| || |||||||||||||||| |||||||||||||| | |||||||||||||||    
T  51935637 ttttttagagctgtctgcaaaaaaattagatcaaaattcaatttctaggttgacgttttgatgtttttgtttcttgagttattgacgcattaaaaattca 51935736  T
Q  578 tatttaatccatccgttctcgaaaaattctaattttttgcgggaaatgnnnnnnnnnatgttcttaatatgtgtacnnnnnnnnnnnnnnnnnctcaacc 677  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||         |||||||||||||||||||                  ||||||    
T  51935737 tatttaatccatccgtcgtcgaaaaattctaattttttgcgggaaatgtttttttttatgttcttaatatgtgtacaaaaataatgaaaaaat-tcaacc 51935835  T
Q  678 tctatataacttttccgggcacgtagttagaaaaatattgcaattttacgcgttttagtnnnnnnnntcaaaataaattgaggattactcgaaatactaa 777  Q
    |||||||||||||||||| | || ||||||||||||||||||||||||||||||| | |        ||||||||||||||||||||||| |||||||||    
T  51935836 tctatataacttttccggacgcgcagttagaaaaatattgcaattttacgcgtttcaat-aaaaaaatcaaaataaattgaggattactcaaaatactaa 51935934  T
Q  778 gaaaatttgcagatcctctatatgtatttttatagaggtgtctgcnnnnnnncagctcaaaattcaatttttaggttgatattttgatgttttc 871  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||       |||||||||||||||||||||||||||| ||||||| |||||    
T  51935935 gaaaatttccagatcctctatatgtatttttatagaagtgtctgcaaaaaaacagctcaaaattcaatttttaggttgatgttttgatattttc 51936028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 132; E-Value: 5e-68
Query Start/End: Original strand, 508 - 862
Target Start/End: Complemental strand, 7999195 - 7998843
Alignment:
Q  508 tcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatccgttctcgaaaaattct 607  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||||    
T  7999195 tcaaaattcaatttctaggtcgacgttttgatgttttggtttcttgagttat-gacgcattaaaaattcatatttaatccatccgttgtcgaaaaattct 7999097  T
Q  608 aattttttgcgggaaatgnnnnnnnnnatgttcttaatatgtgtac-nnnnnnnnnnnnnnnnnctcaacctctatataacttttccgggcacgtagtta 706  Q
    ||||||||  ||||||||         |||||||||||||||||||                   ||||||||||||||| ||||  ||   || ||||     
T  7999096 aatttttttagggaaatg-tttttattatgttcttaatatgtgtacaaaaaataatgaaaaaaattcaacctctatataatttttttggatgcgcagttg 7998998  T
Q  707 gaaaaatattgcaattttacgcgttttagtnnnnnnnntcaaaataaattgaggattactcgaaatactaagaaaatttgcagatcctctatatgtattt 806  Q
    |||||||||||||||||||||||||| |||        |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  7998997 gaaaaatattgcaattttacgcgtttcagtaaaaaaattcaaaataaattgaggattactcgaaatactaagaaaatttgcagatcctct-tatgtattt 7998899  T
Q  807 ttatagaggtgtctgcnnnnnnncagctcaaaattcaatttttaggttgatatttt 862  Q
    |||||||||||||| |       || ||||||||||||||||||||||||| ||||    
T  7998898 ttatagaggtgtctcctaaaaaacaactcaaaattcaatttttaggttgatgtttt 7998843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 391 - 625
Target Start/End: Original strand, 48899033 - 48899269
Alignment:
Q  391 tgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagaccctctatattt-tannnnnnnn-agag 488  Q
    ||||||||| | ||||| || ||||||||||||||||| ||||| |||| ||||||||||||| |||||||||||||||||| | ||         ||||    
T  48899033 tgattttacacctttcgatcgaaaaatcaaaataaatcaaaactcattcagaattctacgaaaatttacagaccctctatatatatatttttttttagag 48899132  T
Q  489 atgtctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatcca 588  Q
     |||||| |||| ||||| |||||||||||||| || || |  ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  48899133 ttgtctgtaaaagaccagctcaaaattcaatttataggttgttgttttgatgttttagtttcttgagttattggcgcattaaaaattcatatttaatcca 48899232  T
Q  589 tccgttctcgaaaaattctaattttttgcgggaaatg 625  Q
    |||||| ||||||||||||||||||||||||||||||    
T  48899233 tccgttgtcgaaaaattctaattttttgcgggaaatg 48899269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 262 - 460
Target Start/End: Original strand, 7998215 - 7998414
Alignment:
Q  262 tattgacacaaataaatgaccaaattactcc-agcggtagttaactgtctctggcatatgcgtcggcagttaattgccgctggctccttcagaggcagtt 360  Q
    ||||||||||  |||||||||||||||| || ||| | ||||||||| ||| |||||||||| |||||||||| |  |||||||||||  ||||||||||    
T  7998215 tattgacacaggtaaatgaccaaattacccccagcaggagttaactgcctccggcatatgcgccggcagttaactttcgctggctcctctagaggcagtt 7998314  T
Q  361 aactgctgctggctttgatgttttttattatgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttaca 460  Q
    |||| |   |||||||| |||||||||||||| |||||||||||||| || ||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  7998315 aactccctttggctttgctgttttttattatggttttacgcgtttcgttcgaaaaatcaaaataaatcgaaatttattcagaattctacgaaactttaca 7998414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 309 - 471
Target Start/End: Complemental strand, 34815673 - 34815510
Alignment:
Q  309 ctctggcatatgcgtcggcagttaattgccgctggctccttcagaggcagttaactgctgctggctttgatgttttttattatgattttacgcgtttcgg 408  Q
    ||||||||| |||| ||| |||||||||||||||| |||| ||||||||||||||||| ||||| |||| || |||||||||| ||||||||||||||||    
T  34815673 ctctggcatttgcgccggtagttaattgccgctggatcctccagaggcagttaactgccgctggttttgctgctttttattataattttacgcgtttcgg 34815574  T
Q  409 tcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagac-cctctata 471  Q
    |  ||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||    
T  34815573 tagaaaaatcaaaataaatcgaaagttattcagaattctacgaaactttacagacacctctata 34815510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 390 - 616
Target Start/End: Complemental strand, 47357368 - 47357152
Alignment:
Q  390 atgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagaccctctatattttannnnnnnnagaga 489  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||  |||||||||||||||||| ||||| ||||| || ||        ||||     
T  47357368 atgattttacgcgtttcggtcaaaaaaataaaataaatcgaaacttatttagaattctacgaaactttatagaccttctat-ttatattttttt-agagc 47357271  T
Q  490 tgtctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccat 589  Q
    | |||  |||||||||| ||||||||||||||||| || || | ||||||||||      |||||||||| ||||||||||||||||||||||||| |||    
T  47357270 tctct--aaaaaaccagctcaaaattcaatttctaggttgatggtttgatgttt------cttgagttattggcgcattaaaaattcatatttaattcat 47357179  T
Q  590 ccgttctcgaaaaattctaattttttg 616  Q
    ||||| |||||||||||||||||||||    
T  47357178 ccgttgtcgaaaaattctaattttttg 47357152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 354 - 463
Target Start/End: Complemental strand, 51936563 - 51936454
Alignment:
Q  354 ggcagttaactgctgctggctttgatgttttttattatgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaa 453  Q
    ||||||||||||| ||||  |||| || ||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||| |||||||||||||    
T  51936563 ggcagttaactgccgctgaatttgctgctttttattatgattttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacgaaa 51936464  T
Q  454 ctttacagac 463  Q
    ||||||||||    
T  51936463 ctttacagac 51936454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 745 - 871
Target Start/End: Complemental strand, 47356992 - 47356863
Alignment:
Q  745 tcaaaataaattgaggattactcgaaatactaagaaaa-tttgcagatcctctatatgtatttttatagaggtgtctgc--nnnnnnncagctcaaaatt 841  Q
    |||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||         |||||| |||||    
T  47356992 tcaaaataaattgaggattagtcgaaatactacgaaaaatttgcagatcctctatatgtatttttatataggtgtctgcaaaaaaaaacagctctaaatt 47356893  T
Q  842 caatttttaggttgatattttgatgttttc 871  Q
    |||||||||||||||| |||||||||||||    
T  47356892 caatttttaggttgattttttgatgttttc 47356863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 392 - 472
Target Start/End: Complemental strand, 7999289 - 7999209
Alignment:
Q  392 gattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagaccctctatat 472  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| |||||||| |||||||||||||    
T  7999289 gattttacgcgttttggtcaaaaaatcaaaataaatcgaaacttattcagaattctacaaaactttagagaccctctatat 7999209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 745 - 862
Target Start/End: Original strand, 48899387 - 48899504
Alignment:
Q  745 tcaaaataaattgaggattactcgaaatactaagaaaatttgcagatcctctatatgtatttttatagaggtgtctgcnnnnnnncagctcaaaattcaa 844  Q
    |||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||| |||||||       |  ||||||||||||    
T  48899387 tcaaaataaattgaggattagtcgaaatactacgaaaatttgcatatcctctatatgtatttttatagagatgtctgcaaaaaaactactcaaaattcaa 48899486  T
Q  845 tttttaggttgatatttt 862  Q
    ||||||||| ||| ||||    
T  48899487 tttttaggtcgatttttt 48899504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 485 - 616
Target Start/End: Original strand, 34815057 - 34815188
Alignment:
Q  485 agagatgtctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaa 584  Q
    |||| ||||||||||||| ||| |||||||||||||| || || || ||||||||||||| || |||| | || | ||||| ||||||||||||||||||    
T  34815057 agaggtgtctgcaaaaaaacagctcaaaattcaatttttaggttgatgttttgatgttttcgtgtcttaaattttaggcgcgttaaaaattcatatttaa 34815156  T
Q  585 tccatccgttctcgaaaaattctaattttttg 616  Q
    ||| ||| || ||||||||||| |||||||||    
T  34815157 tccgtcctttgtcgaaaaattcaaattttttg 34815188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 511 - 616
Target Start/End: Complemental strand, 5865844 - 5865739
Alignment:
Q  511 aaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatccgttctcgaaaaattctaat 610  Q
    |||||| ||||||| ||| | |||||||||||||||||||||||||| | || ||||||||| |||||||||||||| | | || ||| |||||||||||    
T  5865844 aaattcgatttctaggtcaatgttttgatgttttggtttcttgagtttttggtgcattaaaacttcatatttaatccgtaccttgtcggaaaattctaat 5865745  T
Q  611 tttttg 616  Q
    ||||||    
T  5865744 tttttg 5865739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 490 - 621
Target Start/End: Original strand, 51935973 - 51936104
Alignment:
Q  490 tgtctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccat 589  Q
    ||||||||||||| ||| |||||||||||||| || || || |||||||| ||||  |||||| | || | ||||  ||||||||||||||||||||| |    
T  51935973 tgtctgcaaaaaaacagctcaaaattcaatttttaggttgatgttttgatattttcatttcttaaattttaggcgtgttaaaaattcatatttaatccgt 51936072  T
Q  590 ccgttctcgaaaaattctaattttttgcggga 621  Q
    || || ||||||||||| ||||||||| ||||    
T  51936073 cccttgtcgaaaaattcaaattttttgtggga 51936104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 237 - 306
Target Start/End: Complemental strand, 37505066 - 37504996
Alignment:
Q  237 ttgctttttt-atatagaaaacttcctattgacacaaataaatgaccaaattactccagcggtagttaact 306  Q
    |||||||||| |||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  37505066 ttgcttttttgatattgaatacttcctattgacacaagtaaatgaccaaattactccagcggtagttaact 37504996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 232 - 342
Target Start/End: Complemental strand, 51936658 - 51936546
Alignment:
Q  232 gaaaattgctttttt-atatagaaaacttcctattgacacaaataaatgaccaaattact-ccagcggtagttaactgtctctggcatatgcgtcggcag 329  Q
    ||||||||||||||| | || ||| |||||||||||||| || |||||||| |||||||  ||| || || ||||||| |||||||||||||| ||||||    
T  51936658 gaaaattgcttttttgacattgaatacttcctattgacataagtaaatgactaaattacaaccaacgataattaactgcctctggcatatgcgccggcag 51936559  T
Q  330 ttaattgccgctg 342  Q
    |||| ||||||||    
T  51936558 ttaactgccgctg 51936546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 263 - 377
Target Start/End: Complemental strand, 45423352 - 45423240
Alignment:
Q  263 attgacacaaataaatgaccaaattactcca-gcggtagttaactgtctctggcatatgcgtcggcagttaattgccgctggctccttcagaggcagtta 361  Q
    |||||||||| |||||||||||||||| ||  |||| ||||||||||||||||||||| || |  ||||||| |||||||||| |   |||||| |||||    
T  45423352 attgacacaagtaaatgaccaaattaccccccgcggcagttaactgtctctggcatatccggcatcagttaactgccgctggccc---cagaggtagtta 45423256  T
Q  362 actgctgctggctttg 377  Q
    |||||  |||||||||    
T  45423255 actgcctctggctttg 45423240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 404 - 472
Target Start/End: Original strand, 51936213 - 51936282
Alignment:
Q  404 ttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagac-cctctatat 472  Q
    ||||||| ||||||||||||||||||||||||| ||| ||| ||||||||||||| |||| |||||||||    
T  51936213 ttcggtcgaaaaatcaaaataaatcgaaacttagtcgaaatgctacgaaactttatagacacctctatat 51936282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 498 - 585
Target Start/End: Original strand, 31106460 - 31106547
Alignment:
Q  498 aaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaat 585  Q
    |||||||| ||||||||||||||| || ||| | |||||  |||||||||||| |||||| | || || |||||||||||||||||||    
T  31106460 aaaaaccaaatcaaaattcaatttttacgtcaatgttttactgttttggtttcatgagtttttggtgcgttaaaaattcatatttaat 31106547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 535 - 621
Target Start/End: Complemental strand, 7998852 - 7998766
Alignment:
Q  535 ttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatccgttctcgaaaaattctaattttttgcggga 621  Q
    |||||||||| || |||| | || | ||||| ||||||||||||||||||||| ||| || ||||||||||| ||||||||| ||||    
T  7998852 ttgatgttttcgtgtcttaaattttaggcgcgttaaaaattcatatttaatccgtcccttgtcgaaaaattcaaattttttgtggga 7998766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 391 - 457
Target Start/End: Original strand, 45423044 - 45423110
Alignment:
Q  391 tgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaacttt 457  Q
    ||||||||||  |||||||| ||| ||||||||||||||| |||||||||||||  |||||||||||    
T  45423044 tgattttacgtttttcggtcgaaatatcaaaataaatcgagacttattcggaatggtacgaaacttt 45423110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 404 - 472
Target Start/End: Original strand, 34815281 - 34815350
Alignment:
Q  404 ttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagac-cctctatat 472  Q
    ||||||| ||||||||||||||||||| ||||| ||| ||| ||||||||||||| |||| |||||||||    
T  34815281 ttcggtcgaaaaatcaaaataaatcgagacttagtcgaaatgctacgaaactttatagacacctctatat 34815350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 395 - 463
Target Start/End: Complemental strand, 45423210 - 45423142
Alignment:
Q  395 tttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagac 463  Q
    ||||||| ||||| || ||||||||||||||||| ||||| ||||  ||||||| ||||||||||||||    
T  45423210 tttacgcatttcgttcgaaaaatcaaaataaatctaaactcattcaaaattctatgaaactttacagac 45423142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 393 - 572
Target Start/End: Original strand, 6131410 - 6131578
Alignment:
Q  393 attttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagaccctctatattttannnnnnnnagagatgt 492  Q
    ||||| |||||||||||||||||||||||| |||||||  |||| ||| |||  |||| ||||||| ||| ||||||||| |          ||||||||    
T  6131410 attttgcgcgtttcggtcaaaaaatcaaaacaaatcgaggcttactcgaaatgttacggaactttatagatcctctatatgt---attttatagagatgt 6131506  T
Q  493 ctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaa 572  Q
    ||||||||||| ||  |||||||  ||||||| ||        ||||||||||||||||||||||||  |||||||||||    
T  6131507 ctgcaaaaaactagcccaaaatttgatttctaggt--------tgatgttttggtttcttgagttataagcgcattaaaa 6131578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 778 - 820
Target Start/End: Complemental strand, 6131788 - 6131746
Alignment:
Q  778 gaaaatttgcagatcctctatatgtatttttatagaggtgtct 820  Q
    |||| ||||||||||||||||||||||||| ||||||||||||    
T  6131788 gaaactttgcagatcctctatatgtattttaatagaggtgtct 6131746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 747 - 809
Target Start/End: Complemental strand, 7281015 - 7280953
Alignment:
Q  747 aaaataaattgaggattactcgaaatactaagaaaatttgcagatcctctatatgtattttta 809  Q
    |||||||||||||||||| | | ||| ||| |||| ||| |||||||||||||||||||||||    
T  7281015 aaaataaattgaggattattaggaatgctacgaaactttacagatcctctatatgtattttta 7280953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 231 - 281
Target Start/End: Original strand, 35574466 - 35574516
Alignment:
Q  231 agaaaattgcttttttatatagaaaacttcctattgacacaaataaatgac 281  Q
    |||||||||||||| || |||||| ||||||||||||||||| ||||||||    
T  35574466 agaaaattgcttttctacatagaatacttcctattgacacaagtaaatgac 35574516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 263 - 344
Target Start/End: Original strand, 45422906 - 45422988
Alignment:
Q  263 attgacacaaataaatgaccaaattactc-cagcggtagttaactgtctctggcatatgcgtcggcagttaattgccgctggc 344  Q
    ||||||||| ||||||||||||||||  | || ||||||||||||| |||| |||||| || | |||||||| ||||||||||    
T  45422906 attgacacagataaatgaccaaattatcctcaacggtagttaactgcctcttgcatatccggcagcagttaactgccgctggc 45422988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 391 - 459
Target Start/End: Complemental strand, 48899832 - 48899763
Alignment:
Q  391 tgattttacgcgtttcggt-caaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttac 459  Q
    |||||||| |||||||| | | ||||||||||||||||| |||||||||  ||||||||||||| |||||    
T  48899832 tgattttatgcgtttcgattcgaaaaatcaaaataaatcaaaacttatttagaattctacgaaattttac 48899763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 261 - 308
Target Start/End: Complemental strand, 16002686 - 16002638
Alignment:
Q  261 ctattgacacaaataaatgaccaaatta-ctccagcggtagttaactgt 308  Q
    |||||||||||| ||||||| ||||||| ||||||||||||||||||||    
T  16002686 ctattgacacaagtaaatgatcaaattacctccagcggtagttaactgt 16002638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 745 - 821
Target Start/End: Complemental strand, 28357169 - 28357093
Alignment:
Q  745 tcaaaataaattgaggattactcgaaatactaagaaaatttgcagatcctctatatgtatttttatagaggtgtctg 821  Q
    ||||||||||||||||  || ||  |||||||||||| ||||  |||||||| ||||||||| ||||||| ||||||    
T  28357169 tcaaaataaattgaggcgtagtctgaatactaagaaactttgtcgatcctctctatgtatttatatagagatgtctg 28357093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 232 - 299
Target Start/End: Original strand, 37504581 - 37504649
Alignment:
Q  232 gaaaattgctttttta-tatagaaaacttcctattgacacaaataaatgaccaaattactccagcggta 299  Q
    |||||||||||||||| ||| ||| |||| |||||||||||| |||||||  ||||||| |||||||||    
T  37504581 gaaaattgcttttttaatattgaatactttctattgacacaagtaaatgattaaattaccccagcggta 37504649  T

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Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 231 - 342
Target Start/End: Complemental strand, 7999422 - 7999311
Alignment:
Q  231 agaaaattgcttttttatatagaaaacttcctattgacacaaataaatgaccaaattactccagcggtagttaactgtctctggcatatgcgtcggcagt 330  Q
    |||||||| |||||  | || ||| |||| ||||| |||||| ||||| |||||||  | | | || |||||| ||  ||||||||||||||||||||||    
T  7999422 agaaaattacttttccacatcgaatacttactatttacacaagtaaataaccaaataccccaaacgatagttagctacctctggcatatgcgtcggcagt 7999323  T
Q  331 taattgccgctg 342  Q
    ||| ||||||||    
T  7999322 taactgccgctg 7999311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 391 - 458
Target Start/End: Original strand, 47356386 - 47356453
Alignment:
Q  391 tgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaacttta 458  Q
    ||||||||||| ||||| |  ||||||||||||||||| ||| |||||| |||||| |||||| ||||    
T  47356386 tgattttacgcatttcgatttaaaaatcaaaataaatcaaaatttattcagaattcaacgaaatttta 47356453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 399 - 472
Target Start/End: Complemental strand, 6131839 - 6131766
Alignment:
Q  399 cgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagaccctctatat 472  Q
    |||||||  ||| |||||||||||||||||||  ||| |||  ||| |||||||||||| |||| |||||||||    
T  6131839 cgcgtttttgtcgaaaaatcaaaataaatcgagcctttttcataatgctacgaaactttgcagatcctctatat 6131766  T

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Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 571 - 616
Target Start/End: Complemental strand, 11346896 - 11346851
Alignment:
Q  571 aaattcatatttaatccatccgttctcgaaaaattctaattttttg 616  Q
    ||||||||||||||||||||  || ||| |||||||||||||||||    
T  11346896 aaattcatatttaatccatcatttttcggaaaattctaattttttg 11346851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 232 - 285
Target Start/End: Complemental strand, 14441171 - 14441118
Alignment:
Q  232 gaaaattgcttttttatatagaaaacttcctattgacacaaataaatgaccaaa 285  Q
    |||||||||||||| | |||||| ||||||||||||||||| ||| | ||||||    
T  14441171 gaaaattgctttttgacatagaatacttcctattgacacaagtaatttaccaaa 14441118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 401 - 438
Target Start/End: Complemental strand, 25484304 - 25484267
Alignment:
Q  401 cgtttcggtcaaaaaatcaaaataaatcgaaacttatt 438  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  25484304 cgtttcggtcgaaaaatcaaaataaatcgagacttatt 25484267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 393 - 457
Target Start/End: Original strand, 34815422 - 34815487
Alignment:
Q  393 attttacgcgtttcggtc-aaaaaatcaaaataaatcgaaacttattcggaattctacgaaacttt 457  Q
    ||||| |||||||||||| ||||||| |||| ||||||| |||||||| ||||  |||||||||||    
T  34815422 attttgcgcgtttcggtcgaaaaaataaaaaaaaatcgagacttattcagaatgttacgaaacttt 34815487  T

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Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 783 - 820
Target Start/End: Original strand, 47356604 - 47356641
Alignment:
Q  783 tttgcagatcctctatatgtatttttatagaggtgtct 820  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  47356604 tttgcacatcatctatatgtatttttatagaggtgtct 47356641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 392 - 457
Target Start/End: Original strand, 51936357 - 51936422
Alignment:
Q  392 gattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaacttt 457  Q
    |||||| |||||||||||| |||||  |||| ||||||| ||||||| |||||  |||||||||||    
T  51936357 gattttgcgcgtttcggtcgaaaaaataaaaaaaatcgagacttatttggaatgttacgaaacttt 51936422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 276; Significance: 1e-154; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 233 - 822
Target Start/End: Original strand, 48097342 - 48097930
Alignment:
Q  233 aaaattgctttttt-atatagaaaacttcctattgacacaaataaatgaccaaattactc-cagcggtagttaactgtctctggcatatgcgtcggcagt 330  Q
    |||||| ||||||| |||||||| ||||||||||||||||| |||||||||||||||| | ||| |||||||||||| || || |||||||| ||||||     
T  48097342 aaaattacttttttgatatagaatacttcctattgacacaagtaaatgaccaaattaccctcaggggtagttaactgcctatgccatatgcgccggcagg 48097441  T
Q  331 taattgccgctggctccttcagaggcagttaactgctgctggctttgatgttttttattatgattttacgcgtttcggtcaaaaaatcaaaataaatcga 430  Q
    ||| ||||||||||||||  |||||||||||||| | |||||||||| || |||||||||||||||||||||||||||| ||||||||||||||||| ||    
T  48097442 taagtgccgctggctcctcaagaggcagttaactaccgctggctttgctgctttttattatgattttacgcgtttcggtaaaaaaatcaaaataaattga 48097541  T
Q  431 aacttattcggaattctacgaaactttacagaccctctatattttannnnnnnnagagatgtctgcaaaaaaccagatcaaaattcaatttctaagtcga 530  Q
    |||||||||  ||||||||||||||||| |||||||||||| | ||        |||| ||||||||||||||||||||||||||||||||||| |||||    
T  48097542 aacttattcaaaattctacgaaactttatagaccctctata-tatatattttttagagctgtctgcaaaaaaccagatcaaaattcaatttctaggtcga 48097640  T
Q  531 cgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatccgttctcgaaaaattctaattttttgcgggaaatgnnnnn 630  Q
    ||||||||||||||||||||||||||||| | | |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||         
T  48097641 cgttttgatgttttggtttcttgagttattgacacattaaaaattcatatttaatccatccgttgtcaaaaaattctaattttttgcgggaaatg-attt 48097739  T
Q  631 nnnnatgttcttaatatgtgtacnnnnnnnnnnnnnnnnnctcaacctctatataacttttccgggcacgtagttagaaaaatattgcaattttacgcgt 730  Q
        ||||||||||||||| |||                  |||||||||||||||||||||||| | || |||||||||||||||||||||||||| ||    
T  48097740 ttttatgttcttaatatgtttacaaaaaataatgaaaaaattcaacctctatataacttttccggacgcgcagttagaaaaatattgcaattttacgtgt 48097839  T
Q  731 tttagtnnnnnnnntcaaaataaattgaggattactcgaaatactaagaaaatttgcagatcctctatatgtatttttatagaggtgtctgc 822  Q
    ||  ||        |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  48097840 ttcggt-aaaaaaatcaaaataaattgaggattactcgaaatacaaagaaaatttgcagatcctctatatgtatttttatagaggtgtctgc 48097930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 356 - 862
Target Start/End: Original strand, 54921499 - 54922003
Alignment:
Q  356 cagttaactgctgctggctttgatgttttttattat--gattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaa 453  Q
    ||||||||||| |||| ||||  || ||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  54921499 cagttaactgccgctgactttactgctttttattatatgattttacgcgtttcggtcgaaaaatcaaaataaatcgaaacttattcagaattctacgaaa 54921598  T
Q  454 ctttacagaccctctatattttannnnnnnnagagatgtctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttg 553  Q
    |||||||||||||  |||| |          |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  54921599 ctttacagacccttaatatat--atttttttagagatgtctgcaaaaaaccagatcaaaattcaatttctaggtcgacgttttgatgttttggtttcttg 54921696  T
Q  554 agttatcggcgcattaaaaattcatatttaatccatccgttctcgaaaaattctaattttttgcgggaaatgnnnnnnnnnatgttcttaatatgtgtac 653  Q
    |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||         |||||||||||||||||||    
T  54921697 agttattggcgcattaaaaattcatatttaatccatccgttgtcgaaaaattctaattttttgtggaaaatg-ttttttttatgttcttaatatgtgtac 54921795  T
Q  654 nnnnnnnnnnnnnnnnnctcaacctctatataacttttccgggcacgtagttagaaaaatattgcaattttacgcgttttagtnnnnnnnntcaaaataa 753  Q
                      |||| |||||||||||||||||||   || ||||||||||||||||||||||||||||||| |||        |||||||||    
T  54921796 aaaaaataatgaaaaaattcaatctctatataacttttccggatgcgcagttagaaaaatattgcaattttacgcgtttcagt-aaaaaaatcaaaataa 54921894  T
Q  754 attgaggattactcgaaatactaagaaaatttgcagatcctctatatgtatttttatagaggtgtctgcnnnnnnncagctcaaaattcaatttttaggt 853  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||| |||||    
T  54921895 attgaggattactcgaaatactaagaaaatttgcagatcctctatatgtatttttatagaggtgtctgcaaaaaaacagctcaaaattcaatttctaggt 54921994  T
Q  854 tgatatttt 862  Q
    |||| ||||    
T  54921995 tgatgtttt 54922003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 230; E-Value: 1e-126
Query Start/End: Original strand, 241 - 625
Target Start/End: Original strand, 47640977 - 47641357
Alignment:
Q  241 ttttttatatagaaaacttcctattgacacaaataaatgaccaaattactccagcggtagttaactgtctctggcatatgcgtcggcagttaattgccgc 340  Q
    ||||||||||||| | ||||||||||||| || |||||||||||||||| | |||||||||||||||||||||||||||||| |||||||||| |||||     
T  47640977 ttttttatatagata-cttcctattgacataagtaaatgaccaaattaccctagcggtagttaactgtctctggcatatgcgccggcagttaactgccgt 47641075  T
Q  341 tggctccttcagaggcagttaactgctgctggctttgatgttttttattatgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcg 440  Q
    |||||||| ||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||     
T  47641076 tggctcctccagaggcagttaactgccgctggcttcgatgctttttattatgattttacgcgtttcggtcgaaaaatcaaaataaatcgaaatttattca 47641175  T
Q  441 gaattctacgaaactttacagaccctctatattttannnnnnnnagagatgtctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatg 540  Q
     ||||||||||||||||||||| ||||||||| |          |||| |||||||||||||||| ||||||||||||| ||||  ||||||||||||||    
T  47641176 aaattctacgaaactttacaga-cctctatatat--acttttttagagctgtctgcaaaaaaccacatcaaaattcaatatctagctcgacgttttgatg 47641272  T
Q  541 ttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatccgttctcgaaaaattctaattttttgcgggaaatg 625  Q
    |||| ||||||||| |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  47641273 ttttagtttcttgaattattggcgcattaaaaattcatatttaatccatccgttgtcgaaaaattctaattttttgcgggaaatg 47641357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 154; E-Value: 3e-81
Query Start/End: Original strand, 26 - 231
Target Start/End: Complemental strand, 21346839 - 21346636
Alignment:
Q  26 tcgaaatttaattattcggttaaataggtacataaacaaaaattcaattagtgtttatgtttgtatctattcgtgacagagaattaaaacattaacacac 125  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  21346839 tcgaaatttaattattcggttaaatag--acataaacaaaaattcaattagtgtttgtgtttgtatctattcgtgacagagaattaaaacattaacacac 21346742  T
Q  126 aagcagtgcaataagtttatgaaatgaagttcctcacttgcnnnnnnntatacaaaaccacgtcagggcttgggtggctcaagactcatccaaccaaaat 225  Q
    ||| || |||||||||||||||||| |||||||||||||||       ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  21346741 aagtagagcaataagtttatgaaataaagttcctcacttgcaaaaaaatatacaaaaccacgttagggcttgggtggctcaagactcatccaaccaaaat 21346642  T
Q  226 aattaa 231  Q
    ||||||    
T  21346641 aattaa 21346636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 152; E-Value: 5e-80
Query Start/End: Original strand, 373 - 625
Target Start/End: Original strand, 45265583 - 45265832
Alignment:
Q  373 ctttgatgttttttattatgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagaccct--ctat 470  Q
    ||||| || |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||    
T  45265583 ctttgctgctttttattgtgattttacgcgtttcggtcgaaaaatcaaaataaatcgaaacttattcagaattctacgaaactttacagaccctttctat 45265682  T
Q  471 attttannnnnnnnagagatgtctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaa 570  Q
    |||||          ||| |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||||    
T  45265683 attttttttc-----gagttgtctgcaaaaaaccatatcaaaattcaatttctaggtcgacgttttgatgttttggttttttgagttattggcgcattaa 45265777  T
Q  571 aaattcatatttaatccatccgttctcgaaaaattctaattttttgcgggaaatg 625  Q
    ||||||||||||||||||||| || |||||||||| ||||||||||| |||||||    
T  45265778 aaattcatatttaatccatcccttatcgaaaaattataattttttgcaggaaatg 45265832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 125; E-Value: 7e-64
Query Start/End: Original strand, 230 - 460
Target Start/End: Complemental strand, 45266584 - 45266352
Alignment:
Q  230 aagaaaattgctttttt-atatagaaaacttcctattgacacaaataaatgaccaaattactc-cagcggtagttaactgtctctggcatatgcgtcggc 327  Q
    ||||||||||||||||| | || ||| | ||||||||||||||| ||||||||||||| || | |||||| |||||| || |||||||||||||| | ||    
T  45266584 aagaaaattgcttttttgacattgaatatttcctattgacacaagtaaatgaccaaatcacactcagcggaagttaagtgcctctggcatatgcgccagc 45266485  T
Q  328 agttaattgccgctggctccttcagaggcagttaactgctgctggctttgatgttttttattatgattttacgcgtttcggtcaaaaaatcaaaataaat 427  Q
    |||||| |||||||||||||| |||| | |||||||||| |||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||    
T  45266484 agttaactgccgctggctcctccagacgaagttaactgccgctggctttgctgctttttattatgattttacgcgtttcggtcgaaaaatcaaaataaat 45266385  T
Q  428 cgaaacttattcggaattctacgaaactttaca 460  Q
    ||||| |||||  ||||||||||||||||||||    
T  45266384 cgaaagttattaagaattctacgaaactttaca 45266352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 677 - 875
Target Start/End: Original strand, 45265885 - 45266082
Alignment:
Q  677 ctctatataacttttccgggcacgtagttagaaaaatattgcaattttacgcgttttagtnnnnnnnntcaaaataaattgaggattactcgaaatacta 776  Q
    ||||||||||||||||||| | || |||| |||||||||||||||||||| |||||||||        |||||||||||| |||||||||||||||||||    
T  45265885 ctctatataacttttccggacgcgcagttggaaaaatattgcaattttacacgttttagtaaaaaat-tcaaaataaattcaggattactcgaaatacta 45265983  T
Q  777 agaaaatttgcagatcctctatatgtatttttatagaggtgtctgcnnnnnnncagctcaaaattcaatttttaggttgatattttgatgttttcgtgt 875  Q
    | ||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||| |||||||||||||||||    
T  45265984 ataaaatttgcagatcctctatatgtatttttatagaggtgtctgcaaaaaaacagctcaaaattcaatttttaggttgatgttttgatgttttcgtgt 45266082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 672 - 862
Target Start/End: Original strand, 47641406 - 47641598
Alignment:
Q  672 tcaacctctatataacttttccgggcacgtagttagaaaaatattgcaattttacgcgttttagtnnnnnnnntcaaaataaattgaggattactcgaaa 771  Q
    |||||||||||||||||||||||| | || |||||||||||||||||| |||||||||||| |||        |||||||||||||||||||||||||||    
T  47641406 tcaacctctatataacttttccggacgcgcagttagaaaaatattgcatttttacgcgtttcagtaaaaaaa-tcaaaataaattgaggattactcgaaa 47641504  T
Q  772 tactaagaaaatttgcagatcctctatatgtatttttatagaggtgtctgc---nnnnnnncagctcaaaattcaatttttaggttgatatttt 862  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||          |||||||||||||||||||||||||||| ||||    
T  47641505 tactaagaaaatttgcagatcctctatatgtatttttataaaggtgtctgcaaaaaaaaaacagctcaaaattcaatttttaggttgatgtttt 47641598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 356 - 471
Target Start/End: Complemental strand, 54922534 - 54922418
Alignment:
Q  356 cagttaactgctgctggctttgatgttttttattatgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaact 455  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||| |||||||||||||||    
T  54922534 cagttaactgctgctggctttgctgctttttattatgattttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacgaaact 54922435  T
Q  456 ttacagac-cctctata 471  Q
    |||||||| ||||||||    
T  54922434 ttacagacacctctata 54922418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 356 - 471
Target Start/End: Complemental strand, 48098108 - 48097992
Alignment:
Q  356 cagttaactgctgctggctttgatgttttttattatgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaact 455  Q
    ||||||||||| |||||||||| || ||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||| |||||||||||||||    
T  48098108 cagttaactgccgctggctttgctgctttttattatgattttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacgaaact 48098009  T
Q  456 ttacagac-cctctata 471  Q
    |||||||| ||||||||    
T  48098008 ttacagacacctctata 48097992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 402 - 615
Target Start/End: Complemental strand, 314502 - 314291
Alignment:
Q  402 gtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagaccctctatattttannnnnnnnagagatgtctgcaaaaa 501  Q
    ||||||||| |||||||||||||||||||  |||||| ||||| | |  ||||||||||||| |||||||| |          |||| | ||||||||||    
T  314502 gtttcggtcgaaaaatcaaaataaatcgaggcttattaggaatgccatcaaactttacagacactctatatgt--atttttatagagctttctgcaaaaa 314405  T
Q  502 accagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatccgttctcgaaa 601  Q
    ||||  ||| |||| ||||| || |||||||| ||||||||||||||||||||||| | | ||||||||||||| |||||||||||||||||| ||| ||    
T  314404 accaactcataatttaatttttaggtcgacgtcttgatgttttggtttcttgagtttttgacgcattaaaaattaatatttaatccatccgttttcggaa 314305  T
Q  602 aattctaatttttt 615  Q
    ||||||||||||||    
T  314304 aattctaatttttt 314291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 485 - 625
Target Start/End: Complemental strand, 37526292 - 37526152
Alignment:
Q  485 agagatgtctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaa 584  Q
    ||||||||| | |||||||||| ||||||||  |||| || ||||| ||||| | | |||||||||||| ||| | ||||||||||||||||||||||||    
T  37526292 agagatgtccgtaaaaaaccagctcaaaatttgatttttaggtcgatgttttaaggctttggtttcttgcgtttttggcgcattaaaaattcatatttaa 37526193  T
Q  585 tccatccgttctcgaaaaattctaattttttgcgggaaatg 625  Q
    || ||||||| ||| ||||||||||||||||| ||||||||    
T  37526192 tcaatccgttgtcggaaaattctaattttttgtgggaaatg 37526152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 391 - 471
Target Start/End: Complemental strand, 17074616 - 17074535
Alignment:
Q  391 tgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagac-cctctata 471  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  17074616 tgattttacgcgtttcggtcgaaaaatcaaaataaatcgaaacttattcagaattctacgaaactttacagacacctctata 17074535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 232 - 336
Target Start/End: Complemental strand, 47642837 - 47642732
Alignment:
Q  232 gaaaattgctttttt-atatagaaaacttcctattgacacaaataaatgaccaaattactccagcggtagttaactgtctctggcatatgcgtcggcagt 330  Q
    ||||||||||||| | | |||||| |||||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||    
T  47642837 gaaaattgcttttctgacatagaatacttcctattaacacaagtaaatgaccaaattaccccagcggtagttaactgtctctggcatatgcgccgggagt 47642738  T
Q  331 taattg 336  Q
    ||||||    
T  47642737 taattg 47642732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 745 - 862
Target Start/End: Original strand, 17074003 - 17074119
Alignment:
Q  745 tcaaaataaattgaggattactcgaaatactaagaaaatttgcagatcctctatatgtatttttatagaggtgtctgcnnnnnnncagctcaaaattcaa 844  Q
    |||||||||||||||||||| ||||||||||| ||||||||  | |||||||||||||||||||||||||||| ||||       |||||||||||||||    
T  17074003 tcaaaataaattgaggattagtcgaaatactacgaaaattttaaaatcctctatatgtatttttatagaggtgcctgc-aaaaaacagctcaaaattcaa 17074101  T
Q  845 tttttaggttgatatttt 862  Q
    ||||||||||||| ||||    
T  17074102 tttttaggttgatgtttt 17074119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 256 - 345
Target Start/End: Complemental strand, 54922605 - 54922516
Alignment:
Q  256 acttcctattgacacaaataaatgaccaaattactccagcggtagttaactgtctctggcatatgcgtcggcagttaattgccgctggct 345  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||| ||||||||||| ||||||| ||| |||||||    
T  54922605 acttcctattgacacaaataaatgactaaattaccccagcggtagttaactgcctctgacatatgcgtcgacagttaactgctgctggct 54922516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 411 - 585
Target Start/End: Original strand, 46507947 - 46508122
Alignment:
Q  411 aaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagaccctctatattttannnnnnnnagagatgtctgcaaaaaac---caga 507  Q
    ||||||||||||||||| || ||||||||||||| ||| ||||||||||| | ||||||||| |          |||| |||||||||||||    |||     
T  46507947 aaaaaatcaaaataaattgagacttattcggaatgctatgaaactttacatatcctctatatat--atttttatagaggtgtctgcaaaaaaaaatcagc 46508044  T
Q  508 tcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaat 585  Q
    ||||||||| ||||||| ||||| ||||| |||||||||||||||||||| | | |||||||||||||||||||||||    
T  46508045 tcaaaattcgatttctaggtcgatgttttaatgttttggtttcttgagtttttgacgcattaaaaattcatatttaat 46508122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 232 - 345
Target Start/End: Complemental strand, 48098205 - 48098090
Alignment:
Q  232 gaaaattgctttttt-atatagaaaacttcctattgacacaaataaatgaccaaattac-tccagcggtagttaactgtctctggcatatgcgtcggcag 329  Q
    ||||||||||||| | | |||||| ||||||||||||||||| |||||||||||||||| |||||| ||||||||||| ||||| |||||||| || |||    
T  48098205 gaaaattgcttttctgacatagaatacttcctattgacacaagtaaatgaccaaattacctccagcagtagttaactgcctctgacatatgcgccgacag 48098106  T
Q  330 ttaattgccgctggct 345  Q
    |||| |||||||||||    
T  48098105 ttaactgccgctggct 48098090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 382 - 460
Target Start/End: Complemental strand, 47642715 - 47642637
Alignment:
Q  382 tttttattatgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttaca 460  Q
    |||||||||| |||||||||||||||||  ||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  47642715 tttttattataattttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacgaaactttaca 47642637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 233 - 333
Target Start/End: Complemental strand, 21196648 - 21196545
Alignment:
Q  233 aaaattgctttttt-atatagaaaacttcctattgacacaaataaatgaccaaattactcc--agcggtagttaactgtctctggcatatgcgtcggcag 329  Q
    |||||||||||||| | |||||| ||||||||||||||||| |||||||||||||||| ||   ||||||||||||||||| ||||||||||| ||||||    
T  21196648 aaaattgcttttttgacatagaatacttcctattgacacaagtaaatgaccaaattacccccacgcggtagttaactgtctttggcatatgcgccggcag 21196549  T
Q  330 ttaa 333  Q
    ||||    
T  21196548 ttaa 21196545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 485 - 615
Target Start/End: Original strand, 45266018 - 45266148
Alignment:
Q  485 agagatgtctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaa 584  Q
    |||| ||||||||||||| ||| |||||||||||||| || || || ||||||||||||| || |||| | || | | ||| ||||||||||||||||||    
T  45266018 agaggtgtctgcaaaaaaacagctcaaaattcaatttttaggttgatgttttgatgttttcgtgtcttaaattttagacgcgttaaaaattcatatttaa 45266117  T
Q  585 tccatccgttctcgaaaaattctaatttttt 615  Q
    ||| ||| || ||||||| ||| ||||||||    
T  45266118 tccgtcccttgtcgaaaagttcaaatttttt 45266148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 745 - 822
Target Start/End: Complemental strand, 37525710 - 37525633
Alignment:
Q  745 tcaaaataaattgaggattactcgaaatactaagaaaatttgcagatcctctatatgtatttttatagaggtgtctgc 822  Q
    ||||||||||| |||  ||| ||||||||||| | |||||| ||||||||||||||||||||||||||||||||||||    
T  37525710 tcaaaataaatcgagacttagtcgaaatactacggaaattttcagatcctctatatgtatttttatagaggtgtctgc 37525633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 508 - 625
Target Start/End: Complemental strand, 37525944 - 37525827
Alignment:
Q  508 tcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatccgttctcgaaaaattct 607  Q
    ||||||||| |||||||  |||| ||||||| |||||||| ||||||||| | |||||||||||||||||||||||||| |||  ||  |  ||||||||    
T  37525944 tcaaaattcgatttctagatcgatgttttgaggttttggtatcttgagttttaggcgcattaaaaattcatatttaatcaatcaattgccagaaaattct 37525845  T
Q  608 aattttttgcgggaaatg 625  Q
    ||||||||| || |||||    
T  37525844 aattttttgtggaaaatg 37525827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 535 - 621
Target Start/End: Original strand, 47641589 - 47641675
Alignment:
Q  535 ttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatccgttctcgaaaaattctaattttttgcggga 621  Q
    |||||||||| || |||| | || | ||||| ||||||||||||||||||||| |||||| ||||||||||| ||||||||| ||||    
T  47641589 ttgatgttttcgtgtcttaaattttaggcgcgttaaaaattcatatttaatccgtccgttgtcgaaaaattcaaattttttgtggga 47641675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 232 - 344
Target Start/End: Original strand, 21196417 - 21196531
Alignment:
Q  232 gaaaattgctttttt-atatagaaaacttcctattgacacaaataaatgaccaaattactcca--gcggtagttaactgtctctggcatatgcgtcggca 328  Q
    ||||||||||||| | | |||||| | ||||||||||||||| |||||||| |||||| ||||  |||||||||||||| ||||| |||||||| || ||    
T  21196417 gaaaattgcttttctgacatagaatatttcctattgacacaagtaaatgacaaaatta-tccatagcggtagttaactgcctctgacatatgcgccgaca 21196515  T
Q  329 gttaattgccgctggc 344  Q
    ||||| |||| |||||    
T  21196516 gttaactgcctctggc 21196531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 393 - 621
Target Start/End: Original strand, 54921862 - 54922080
Alignment:
Q  393 attttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagaccctctatattttannnnnnnnagagatgt 492  Q
    |||||||||||||| || ||||||||||||||||| ||   ||| ||| ||| ||| |||| ||| |||| ||||||||| |          |||| |||    
T  54921862 attttacgcgtttcagtaaaaaaatcaaaataaattgaggattactcgaaatactaagaaaatttgcagatcctctatatgt--atttttatagaggtgt 54921959  T
Q  493 ctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatccg 592  Q
    |||||||||| ||| ||||||||||||||||| ||        ||||||||| || |||| | || | ||||| ||||||||||||||||||| | |||     
T  54921960 ctgcaaaaaaacagctcaaaattcaatttctaggt--------tgatgttttcgtgtcttaaattttaggcgcgttaaaaattcatatttaattcgtccc 54922051  T
Q  593 ttctcgaaaaattctaattttttgcggga 621  Q
    || ||||||||||| ||||||||| ||||    
T  54922052 ttgtcgaaaaattcaaattttttgtggga 54922080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 256 - 342
Target Start/End: Original strand, 54921427 - 54921514
Alignment:
Q  256 acttcctattgacacaaataaatgaccaaattac-tccagcggtagttaactgtctctggcatatgcgtcggcagttaattgccgctg 342  Q
    |||| |||||||||||| |||||||||||||||| | ||| |||||||||||| ||||| |||||||||   ||||||| ||||||||    
T  54921427 actttctattgacacaagtaaatgaccaaattactttcagtggtagttaactgcctctgacatatgcgttaacagttaactgccgctg 54921514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 745 - 818
Target Start/End: Original strand, 45266277 - 45266350
Alignment:
Q  745 tcaaaataaattgaggattactcgaaatactaagaaaatttgcagatcctctatatgtatttttatagaggtgt 818  Q
    ||||||||||| |||  ||| ||||||| ||| |||| |||||| ||| |||||||||||||||||||||||||    
T  45266277 tcaaaataaatcgagacttagtcgaaatgctacgaaactttgcacatcatctatatgtatttttatagaggtgt 45266350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 745 - 822
Target Start/End: Original strand, 46507953 - 46508030
Alignment:
Q  745 tcaaaataaattgaggattactcgaaatactaagaaaatttgcagatcctctatatgtatttttatagaggtgtctgc 822  Q
    |||||||||||||||  ||| ||| ||| ||| |||| ||| || ||||||||||| |||||||||||||||||||||    
T  46507953 tcaaaataaattgagacttattcggaatgctatgaaactttacatatcctctatatatatttttatagaggtgtctgc 46508030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 508 - 606
Target Start/End: Original strand, 26267704 - 26267802
Alignment:
Q  508 tcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatccgttctcgaaaaattc 606  Q
    |||||||||||||| |||||  | ||||||||||||| || |||| || | | ||||| |||||||||||||||||||   ||| || |||||||||||    
T  26267704 tcaaaattcaatttttaagttaatgttttgatgtttttgtatcttaagatttaggcgcgttaaaaattcatatttaatatgtcccttgtcgaaaaattc 26267802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 387 - 472
Target Start/End: Complemental strand, 37525739 - 37525655
Alignment:
Q  387 attatgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagaccctctatat 472  Q
    |||| |||||||||| ||| ||| |||||||||||||||||||| ||||| ||| ||| ||||| || ||| |||| |||||||||    
T  37525739 attacgattttacgcattttggt-aaaaaatcaaaataaatcgagacttagtcgaaatactacggaaattttcagatcctctatat 37525655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 404 - 457
Target Start/End: Original strand, 45266264 - 45266317
Alignment:
Q  404 ttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaacttt 457  Q
    ||||||| ||||||||||||||||||| ||||| ||| ||| ||||||||||||    
T  45266264 ttcggtcgaaaaatcaaaataaatcgagacttagtcgaaatgctacgaaacttt 45266317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 232 - 350
Target Start/End: Original strand, 45265460 - 45265580
Alignment:
Q  232 gaaaattgctttttt-atatagaaaacttcctattgacacaaataaatgaccaaattactc-cagcggtagttaactgtctctggcatatgcgtcggcag 329  Q
    ||||||||||||||| | ||  || |||||||||||| | ||  |||||| ||||||| || || ||||||||||||| ||||||||||| |||||  ||    
T  45265460 gaaaattgcttttttgacattcaatacttcctattgatataagaaaatgatcaaattattcacaacggtagttaactgcctctggcatatacgtcgatag 45265559  T
Q  330 ttaattgccgctggctccttc 350  Q
    |||| || ||| |||||||||    
T  45265560 ttaactgtcgccggctccttc 45265580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 407 - 458
Target Start/End: Original strand, 17074308 - 17074359
Alignment:
Q  407 ggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaacttta 458  Q
    |||| ||||||||||||||||||| ||||| ||| ||| |||||||||||||    
T  17074308 ggtcgaaaaatcaaaataaatcgagacttagtcgaaatgctacgaaacttta 17074359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 745 - 820
Target Start/End: Complemental strand, 37526033 - 37525958
Alignment:
Q  745 tcaaaataaattgaggattactcgaaatactaagaaaatttgcagatcctctatatgtatttttatagaggtgtct 820  Q
    |||||||||||||| | ||| || |||||||| | |||||| |||||||||  ||||||| || ||||||||||||    
T  37526033 tcaaaataaattgaagcttagtcaaaatactatggaaattttcagatcctcagtatgtatattcatagaggtgtct 37525958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 775 - 821
Target Start/End: Original strand, 17074502 - 17074548
Alignment:
Q  775 taagaaaatttgcagatcctctatatgtatttttatagaggtgtctg 821  Q
    ||||||| ||| || ||| ||||||||||||||||||||||||||||    
T  17074502 taagaaacttttcacatcatctatatgtatttttatagaggtgtctg 17074548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 391 - 441
Target Start/End: Complemental strand, 37526353 - 37526303
Alignment:
Q  391 tgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcgg 441  Q
    |||||||||| ||||||||| ||||||||||||||||| |  |||||||||    
T  37526353 tgattttacgtgtttcggtcgaaaaatcaaaataaatcaaggcttattcgg 37526303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 386 - 427
Target Start/End: Complemental strand, 314208 - 314167
Alignment:
Q  386 tattatgattttacgcgtttcggtcaaaaaatcaaaataaat 427  Q
    |||| ||||||||||||||||||| ||||| |||||||||||    
T  314208 tattgtgattttacgcgtttcggtaaaaaattcaaaataaat 314167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 261 - 306
Target Start/End: Complemental strand, 31401156 - 31401111
Alignment:
Q  261 ctattgacacaaataaatgaccaaattactccagcggtagttaact 306  Q
    |||||||||||| |||||||||||||||| ||| ||| ||||||||    
T  31401156 ctattgacacaagtaaatgaccaaattaccccaacggcagttaact 31401111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 258 - 306
Target Start/End: Complemental strand, 37460582 - 37460533
Alignment:
Q  258 ttcctattgacacaaataaatgaccaaattac-tccagcggtagttaact 306  Q
    |||||| |||||||| |||||||| ||||||| |||||||||||||||||    
T  37460582 ttcctaatgacacaagtaaatgacaaaattacctccagcggtagttaact 37460533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 412 - 472
Target Start/End: Original strand, 47641791 - 47641852
Alignment:
Q  412 aaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagac-cctctatat 472  Q
    ||||||||||||||||| | ||||| ||| ||| ||||||||||||| |||| |||||||||    
T  47641791 aaaaatcaaaataaatcaagacttagtcgaaatgctacgaaactttatagacacctctatat 47641852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 412 - 472
Target Start/End: Original strand, 54922197 - 54922258
Alignment:
Q  412 aaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagac-cctctatat 472  Q
    ||||||||||||||||||| ||||| ||| ||| ||| ||||||||| |||| |||||||||    
T  54922197 aaaaatcaaaataaatcgagacttagtcgaaatgctatgaaactttatagacacctctatat 54922258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 266; Significance: 1e-148; HSPs: 65)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 241 - 875
Target Start/End: Complemental strand, 35144084 - 35143452
Alignment:
Q  241 ttttttatatagaaaacttcctattgacacaaataaatgaccaaatta-ctccagcggtagttaactgtctctggcatatgcgtcggcagttaattgccg 339  Q
    ||||| |||| ||| |||||||||||| ||||  |||||| ||||||| |||| | |||||||||||| ||||| |||||||| ||| |||||| ||| |    
T  35144084 tttttgatattgaatacttcctattgatacaagcaaatgatcaaattagctcccgtggtagttaactgcctctgacatatgcgccggtagttaactgcag 35143985  T
Q  340 ctggctccttcagaggcagttaactgctgctggctttgatgttttttattatgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattc 439  Q
    |||||||| |||||||||||||||||| |||||||||| || ||||||||| | | ||||||||||||||  ||||||||||||||||||||||||||||    
T  35143984 ctggctccatcagaggcagttaactgccgctggctttgttgctttttattaagttcttacgcgtttcggtggaaaaatcaaaataaatcgaaacttattc 35143885  T
Q  440 ggaattctacgaaactttacagaccctctatattttannnnnnnnagagatgtctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgat 539  Q
     ||||||||||||| ||||||||| |||||||| |          |||| ||| ||||| ||||||||||||||||||||||||| || ||||||||| |    
T  35143884 agaattctacgaaattttacagactctctatatat--atttttttagagctgtttgcaataaaccagatcaaaattcaatttctaggtagacgttttggt 35143787  T
Q  540 gttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatccgttctcgaaaaattctaattttttgcgggaaatg-nnnnnnnnnatgt 638  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||          || |    
T  35143786 gttttagtttcttgagttattggcgcattaaaaattcatatttaatccatccgttgtcgaaaaattctaattttttgcgggaaatgttttttttttatat 35143687  T
Q  639 tcttaatatgtgtacnnnnnnnnnnnnnnnnnctcaacctctatataacttttccgggcacgtagttagaaaaatattgcaattttacgcgttttagtnn 738  Q
    |||||||||||||||                  |||||||||||||||||||||||| |  | ||||||||||||||||||||||||||||||| |||      
T  35143686 tcttaatatgtgtacaaaaaataatgaaaaaattcaacctctatataacttttccggacgtgcagttagaaaaatattgcaattttacgcgtttcagt-a 35143588  T
Q  739 nnnnnntcaaaataaattgaggattactcgaaatactaagaaaatttgcagatcctctatatgtatttttatagaggtgtctgcnnnnnnncagctcaaa 838  Q
          |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||       |||||| ||    
T  35143587 aaaaaatcaaaataaattgaggattactcgaaatactaagaaaatttgtagatcctctatatgtatttttatagaggtgtctgcaaaaaaacagctc-aa 35143489  T
Q  839 attcaatttttaggttgatattttgatgttttcgtgt 875  Q
    ||||||||||||||||||| |||||||||||||||||    
T  35143488 attcaatttttaggttgatgttttgatgttttcgtgt 35143452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 354 - 875
Target Start/End: Original strand, 50910317 - 50910836
Alignment:
Q  354 ggcagttaactgctgctggctttgatgttttttattatgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaa 453  Q
    ||||||||||||| |||||||||| ||||||||||||  ||||||| |||||||||| ||||||||||||||||||||| |||||| |||||||||||||    
T  50910317 ggcagttaactgccgctggctttgctgttttttattacaattttactcgtttcggtcgaaaaatcaaaataaatcgaaatttattcagaattctacgaaa 50910416  T
Q  454 ctttacagaccctctatattttannnnnnnnagagatgtctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttg 553  Q
    ||||||||||||||||||| |          |||||| | |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  50910417 ctttacagaccctctatatatatttttttttagagatatatgcaaaaaaccagatcaaaattcaatttataggtcgacgttttgatgttttggtttcttg 50910516  T
Q  554 agttatcggcgcattaaaaattcatatttaatccatccgttctcgaaaaattctaattttttgcgggaaatgnnnnnnnnnatgttcttaatatgtgtac 653  Q
    |||||| | ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||         |||||||||||||||||||    
T  50910517 agttattgtcgcattaaaaattcatatttaatccatccattgtcgaaaaattctaattttttgcgggaaatg-ttttttttatgttcttaatatgtgtac 50910615  T
Q  654 nnnnnnnnnnnnnnnnnctcaacctctatataacttttccgggcacgtagttagaaaaatattgcaattttacgcgttttagtnnnnnnnntcaaaataa 753  Q
                      |||||||||||||||||||||||| |  | |||||||||||||||||||||||||| |||| |||        |||||||||    
T  50910616 aaaaaataatgaaaaaattcaacctctatataacttttccggacgagcagttagaaaaatattgcaattttacgtgtttcagtaaaaaaaatcaaaataa 50910715  T
Q  754 attgaggattactcgaaatactaagaaaatttgcagatcctctatatgtatttttatagaggtgtctgcnnnnnnncagctcaaaattcaatttttaggt 853  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||    
T  50910716 attgaggattactcgaaatactacgaaaatttgcagatcctctatatgtatttttatagaggtgtctgc-aaaaaacagctcaaaattcaatttttaggt 50910814  T
Q  854 tgatattttgatgttttcgtgt 875  Q
    |||| |||||||||||| ||||    
T  50910815 tgatgttttgatgtttttgtgt 50910836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 230 - 619
Target Start/End: Original strand, 11014298 - 11014690
Alignment:
Q  230 aagaaaattgctttttt-atatagaaaacttcctattgacacaaataaatgaccaaatta-ctccagcggtagttaactgtctctggcatatgcgtcggc 327  Q
    ||||||||||||||||| | |||||| | |||||| | |||||| ||||||||||||||| | ||| ||||||||||||| |||||||||||||| ||||    
T  11014298 aagaaaattgcttttttgacatagaataattcctactaacacaagtaaatgaccaaattatccccaacggtagttaactgcctctggcatatgcgccggc 11014397  T
Q  328 agttaattgccgctggctccttcagaggcagttaactgctgctggctttgatgttttttattatgattttacgcgtttcggtcaaaaaatcaaaataaat 427  Q
    |||||| ||||||||||||||  |||||||||||||||| |||| |||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||    
T  11014398 agttaactgccgctggctcctctagaggcagttaactgccgctgcctttgatgctttttattatgattttacgcgtttcagtcgaaaaatcaaaataaat 11014497  T
Q  428 cgaaacttattcggaattctacgaaactttacagaccctctatattttannnnnnnnagagatgtctgc-aaaaaaccagatcaaaattcaatttctaag 526  Q
    |||||||||||| |||||||||||||||||||||||||||||||| |          |||| ||||||| ||||||||| |||||||||||||||||  |    
T  11014498 cgaaacttattcagaattctacgaaactttacagaccctctatatatattcttttagagagctgtctgcaaaaaaaccaaatcaaaattcaatttctcgg 11014597  T
Q  527 tcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatccgttctcgaaaaattctaattttttgcgg 619  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  11014598 tcgacgttttgatgttttggtttcttgagttattggcgcattaaaaattcatatttaatccatccgttgtcgaaaaattctaattttttgcgg 11014690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 353 - 875
Target Start/End: Complemental strand, 38194524 - 38194001
Alignment:
Q  353 aggcagttaactgctgctggctttgatgttttttattatgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaa 452  Q
    |||||||||||||| |||||||||| || ||||||||||||||||| |||||| |||| |||||||||||||||| ||||||||||| ||||||||| ||    
T  38194524 aggcagttaactgccgctggctttgctggtttttattatgattttatgcgttttggtcgaaaaatcaaaataaattgaaacttattcagaattctacaaa 38194425  T
Q  453 actttacagaccctctatattttannnnnnnnagagatgtctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttctt 552  Q
    |||||||||||||||||||| |           ||| ||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  38194424 actttacagaccctctatatat--attttttttgagctgtctgcaaaaaatcagatcaaaattcaatttctaggtcgaagttttgatgttttggtttctt 38194327  T
Q  553 gagttatcggcgcattaaaaattcatatttaatccatccgttctcgaaaaattctaattttttgcgggaaatg----nnnnnnnnnatgttcttaatatg 648  Q
    ||||||  ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||             ||||||||||||||    
T  38194326 gagttagtggcgcattaaaaattcatatttaattcatccgttgtcgaaaaattctaattttttgcgggaaatgtttttttttttttatgttcttaatatg 38194227  T
Q  649 tgtacnnnnnnnnnnnnnnnnnctcaacctctatataacttttccgggcacgtagttagaaaaatattgcaattttacgcgttttagtnnnnnnnntcaa 748  Q
    |||||                  |||||||||||||||||||| |||   || ||||||||||||||||||||||||||||||| |||        ||||    
T  38194226 tgtacaaaaaataatgaaaaaattcaacctctatataactttttcggatgcgcagttagaaaaatattgcaattttacgcgtttcagt-aaaaaaatcaa 38194128  T
Q  749 aataaattgaggattactcgaaatactaagaaaatttgcagatcctctatatgtatttttatagaggtgtctgcnnnnnnncagctcaaaattcaatttt 848  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||       |||||||||||||||||||    
T  38194127 aataaattgaagattactcgaaatactaagaaaatttgcagatcctctatatgtatttttatagaggtgtttgcaaaaaaacagctcaaaattcaatttt 38194028  T
Q  849 taggttgatattttgatgttttcgtgt 875  Q
    ||||||||| |||||||||||||||||    
T  38194027 taggttgatgttttgatgttttcgtgt 38194001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 230; E-Value: 1e-126
Query Start/End: Original strand, 235 - 625
Target Start/End: Original strand, 9617212 - 9617600
Alignment:
Q  235 aattgctttttt-atatagaaaacttcctattgacacaaataaatgaccaaattac-tccagcggtagttaactgtctctggcatatgcgtcggcagtta 332  Q
    |||||||||||| | || ||| ||||||||||||||||| ||||||| |||||||| || ||||||||||||||| |||||||||||||| |||||||||    
T  9617212 aattgcttttttgacatcgaatacttcctattgacacaagtaaatgatcaaattacctctagcggtagttaactgcctctggcatatgcgccggcagtta 9617311  T
Q  333 attgccgctggctccttcagaggcagttaactgctgctggctttgatgttttttattatgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaa 432  Q
    | |||||||||||||| |||| |||||||||||| ||||||| || || ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  9617312 actgccgctggctcctccagatgcagttaactgccgctggctctgctgctttttattatgattttacgcgtttcggtcgaaaaatcaaaataaatcgaaa 9617411  T
Q  433 cttattcggaattctacgaaactttacagaccctctatattttannnnnnnnagagatgtctgcaaaaaaccagatcaaaattcaatttctaagtcgacg 532  Q
    ||||||| ||||||||||||| ||||||||||||| |||| |          |||||||||||||||||| |||||| |||||||||||||| |||||||    
T  9617412 cttattcagaattctacgaaaatttacagaccctcaatatat--atttttttagagatgtctgcaaaaaa-cagatc-aaattcaatttctaggtcgacg 9617507  T
Q  533 ttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatccgttctcgaaaaattctaattttttgcgggaaatg 625  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  9617508 ttttgatgtgttggtttcttgagttattggcgcattaaaaattcatatttaatccatccgttgtcgaaaaattctaattttttgcgggaaatg 9617600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 354 - 862
Target Start/End: Original strand, 40731374 - 40731880
Alignment:
Q  354 ggcagttaactgctgctggctttgatgttttttattatgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaa 453  Q
    ||||||||||||| |||||||||| || |||||||||||||||||||| |||| ||| ||||||||||||||||||||| |||||| |||||||||||||    
T  40731374 ggcagttaactgccgctggctttgctgctttttattatgattttacgcatttcagtcgaaaaatcaaaataaatcgaaatttattcagaattctacgaaa 40731473  T
Q  454 ctttacagaccctctatattttannnnnnnnagagatgtctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttg 553  Q
    | |||||| || | ||||| |          |||| ||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  40731474 cattacaggccatatatatatatatatatttagagttgtttgcaaaaaatcagatcaaaattcaatttctaggtcgacgttttgatgttttggtttcttg 40731573  T
Q  554 agttatcggcgcattaaaaattcatatttaatccatccgttctcgaaaaattctaattttttgcgggaaatgnnnnnnnnnatgttcttaatatgtgtac 653  Q
    |||||| |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||         ||||||||||| ||||||     
T  40731574 agttattggcgcattaaaaattcatatttaatccatccgttgtcgaaaaattataattttttgcgggaaatg-ttttttttatgttcttaatttgtgtat 40731672  T
Q  654 nnnnnnnnnnnnnnnnnctcaacctctatataacttttccgggcacgtagttagaaaaatattgcaattttacgcgttttagtnnnnnnnntcaaaataa 753  Q
                      ||||||||||||||||||||| || | || ||||||||||||||||||||||||||||||| |||        |||||||||    
T  40731673 aaaaaataatgaaaaaattcaacctctatataacttttctggacgcgcagttagaaaaatattgcaattttacgcgtttcagt-aaaaaaatcaaaataa 40731771  T
Q  754 attgaggattactcgaaatactaagaaaatttgcagatcctctatatgtatttttatagaggtgtctgcnnnnnnncagctcaaaattcaatttttaggt 853  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||       |||||||||||||||| |||||||    
T  40731772 attgaggattactcgaaatactaagaaatttttcagatcctctatatgtatttttatagaggtgtctgcaaaaaaacagctcaaaattcaatatttaggt 40731871  T
Q  854 tgatatttt 862  Q
    |||| ||||    
T  40731872 tgatgtttt 40731880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 232 - 622
Target Start/End: Complemental strand, 52074721 - 52074357
Alignment:
Q  232 gaaaattgcttttttat-atagaaaacttcctattgacacaaataaatgaccaaattactccagcggtagttaactgtctctggcatatgcgtcggcagt 330  Q
    |||||||| |||||||  || ||| |||| ||||||||| || ||||||| |||||||| |||||||||||||| ||||||||||||||||| | |||||    
T  52074721 gaaaattgtttttttaacattgaatactttctattgacataagtaaatgatcaaattaccccagcggtagttaattgtctctggcatatgcggctgcagt 52074622  T
Q  331 taattgccgctggctccttcagaggcagttaactgctgctggctttgatg-ttttttattatgattttacgcgtttcggtcaaaaaatcaaaataaatcg 429  Q
    ||||||||||||||||||||||||| |||||| |||   |||||||  || ||||||||| |||||||||| ||||||||| ||||||||||||||        
T  52074621 taattgccgctggctccttcagaggtagttaattgcctttggcttttctgcttttttattttgattttacgtgtttcggtcgaaaaatcaaaataa---- 52074526  T
Q  430 aaacttattcggaattctacgaaactttacagaccctctatattttannnnnnnnagagatgtctgcaaaaaaccagatcaaaattcaatttctaagtcg 529  Q
                 |||    ||||||||||||||||||||| ||||         |||| ||||||||| |||||| |||||||||||||||||| ||||    
T  52074525 -------------att----gaaactttacagaccctctatttttt-------ttagagttgtctgcaacaaaccatatcaaaattcaatttctaggtcg 52074450  T
Q  530 acgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatccgttctcgaaaaattctaattttttgcgggaa 622  Q
    ||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  52074449 acgttttgatgttttagtttcttgaattattggcgcattaaaaattcatatttaatccatccgttgtcgaaaaattcaaattttttgcgggaa 52074357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 114; E-Value: 3e-57
Query Start/End: Original strand, 672 - 875
Target Start/End: Original strand, 11014744 - 11014946
Alignment:
Q  672 tcaacctctatataacttttccgggcacgtagttagaaaaatattgcaattttacgcgttttagtnnnnnnnntcaaaataaattgaggattactcgaaa 771  Q
    |||||||||||||||||||||||| | || |||||||||||||||||||| |||||||||| |||        ||| ||||||||||||||||||||||     
T  11014744 tcaacctctatataacttttccggacgcgcagttagaaaaatattgcaatgttacgcgtttcagtaaaaaaa-tcataataaattgaggattactcgaat 11014842  T
Q  772 tactaagaaaatttgcagatcctctatatgtatttttatagaggtgtctgcnnnnnnncagctcaaaattcaatttttaggttgatattttgatgttttc 871  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||| ||||||||||| ||||||||||||     
T  11014843 tactaagaaaatttgcagatcctctatatgtatttttatagaggtgtctgcaaaaaaacagctcaaaattcaatatttaggttgatgttttgatgttttt 11014942  T
Q  872 gtgt 875  Q
    ||||    
T  11014943 gtgt 11014946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 672 - 875
Target Start/End: Original strand, 9617651 - 9617853
Alignment:
Q  672 tcaacctctatataacttttccgggcacgtagttagaaaaatattgcaattttacgcgttttagtnnnnnnnntcaaaataaattgaggattactcgaaa 771  Q
    |||||||||||||||||||||||| | || ||||||||||||||| ||||||||||||||| | |        |||||||||||||||||||||||||||    
T  9617651 tcaacctctatataacttttccggacgcgcagttagaaaaatattacaattttacgcgtttcaataaaaaaa-tcaaaataaattgaggattactcgaaa 9617749  T
Q  772 tactaagaaaatttgcagatcctctatatgtatttttatagaggtgtctgcnnnnnnncagctcaaaattcaatttttaggttgatattttgatgttttc 871  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||||||       |||||||||||||||||||||| ||||| ||||||||||||     
T  9617750 tactaagaaaattagcagatcctctatatgtattttcatagaggtgtctgcaaaaatacagctcaaaattcaatttttagcttgatgttttgatgtttta 9617849  T
Q  872 gtgt 875  Q
    ||||    
T  9617850 gtgt 9617853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 232 - 471
Target Start/End: Complemental strand, 11015603 - 11015364
Alignment:
Q  232 gaaaattgcttttttatatagaaaacttcctattgacacaaataaatgaccaaattact-ccagcggtagttaactgtctctggcatatgcgtcggcagt 330  Q
    |||||||||||||  | |||||| | ||||||||||||||||||||||| ||||||||  |||||||||||||| || |||||| |||||||||   |||    
T  11015603 gaaaattgctttta-acatagaatatttcctattgacacaaataaatgatcaaattaccaccagcggtagttaagtgcctctggtatatgcgtcatgagt 11015505  T
Q  331 taattgccgctggctccttcagaggcagttaactgctgctggctttgatgttttttattatgattttacgcgtttcggtcaaaaaatcaaaataaatcga 430  Q
    ||| |||||||||||||| ||||||||||||||||| | || ||||| || |||||||||| |||||| ||||||| ||  |||||||||||| ||||||    
T  11015504 taactgccgctggctcctccagaggcagttaactgccgttgactttgctgctttttattataattttatgcgtttcagtagaaaaatcaaaat-aatcga 11015406  T
Q  431 aacttattcggaattctacgaaactttacagac-cctctata 471  Q
    || |||||| ||||||||||||||||| ||||| ||||||||    
T  11015405 aagttattcagaattctacgaaactttccagacacctctata 11015364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 228 - 460
Target Start/End: Original strand, 38193360 - 38193580
Alignment:
Q  228 ttaagaaaattgctttttt-atatagaaaacttcctattgacacaaataaatgaccaaattactcc-agcggtagttaactgtctctggcatatgcgtcg 325  Q
    ||||||||||| ||||| | | |||||| ||||||||||||||||| |||||||||||| ||| || |||||||||||||||  |||||||||||         
T  38193360 ttaagaaaattacttttctgacatagaatacttcctattgacacaagtaaatgaccaaactacccccagcggtagttaactgcttctggcatatg----- 38193454  T
Q  326 gcagttaattgccgctggctccttcagaggcagttaactgctgctggctttgatgttttttattatgattttacgcgtttcggtcaaaaaatcaaaataa 425  Q
             |||||||||||||| ||||||||||||| ||  |||||||||| || |||||| |||||||||||||||||||||  ||||||||||||||    
T  38193455 ---------tgccgctggctcctccagaggcagttaattgtcgctggctttgctgctttttaatatgattttacgcgtttcggtagaaaaatcaaaataa 38193545  T
Q  426 atcgaaacttattcggaattctacgaaactttaca 460  Q
    ||||||| |||||| ||||||||||||||||||||    
T  38193546 atcgaaagttattcagaattctacgaaactttaca 38193580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 678 - 857
Target Start/End: Complemental strand, 52074299 - 52074120
Alignment:
Q  678 tctatataacttttccgggcacgtagttagaaaaatattgcaattttacgcgttttagtnnnnnnnntcaaaataaattgaggattactcgaaatactaa 777  Q
    |||||||||||||||||| |||| ||||  |||||||||||||||||| |||||| |||        | |||||||||||| |||||||| |||||||||    
T  52074299 tctatataacttttccggacacgcagttgaaaaaatattgcaattttaagcgtttcagtaaaaaaattaaaaataaattgacgattactcaaaatactaa 52074200  T
Q  778 gaaaatttgcagatcctctatatgtatttttatagaggtgtctgcnnnnnnncagctcaaaattcaatttttaggttgat 857  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||       ||||||||||||||||||||||||||||    
T  52074199 gaaaatttgcagatcctctatatctatttttacagaggtgtctgcaaaaaaacagctcaaaattcaatttttaggttgat 52074120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 388 - 625
Target Start/End: Original strand, 33436298 - 33436520
Alignment:
Q  388 ttatgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagaccctctatattttannnnnnnnaga 487  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||   |||||||||||||| |||||||  || |||| |                 
T  33436298 ttatgattttacgcgtttcggtcgaaaaatcaaaataaatcaaaacttattaataattctacgaaactatacagactttccatatat------------- 33436384  T
Q  488 gatgtctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatcc 587  Q
     || |  |||  ||| ||| ||||||||  ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  33436385 -atatgcgcattaaaacagctcaaaatttgatttctaggtcgacgttttgatgttttggtttcttgagttattggcgcattaaaaattcaaatttaatcc 33436483  T
Q  588 atccgttctcgaaaaattctaattttttgcgggaaatg 625  Q
    ||||||| | ||||||||||||  ||||||||||||||    
T  33436484 atccgttgttgaaaaattctaa-attttgcgggaaatg 33436520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 350 - 471
Target Start/End: Complemental strand, 50911378 - 50911256
Alignment:
Q  350 cagaggcagttaactgctgctggctttgatgttttttattatgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctac 449  Q
    ||||||||||||||||| |||| ||||| ||||||||||||||||||||||| |||||||  |||||| |||||||||||| | |||||| |||||||||    
T  50911378 cagaggcagttaactgccgctgactttgctgttttttattatgattttacgcatttcggtagaaaaattaaaataaatcgagagttattcagaattctac 50911279  T
Q  450 gaaactttacagac-cctctata 471  Q
    |||||||||||||| ||||||||    
T  50911278 gaaactttacagacacctctata 50911256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 673 - 821
Target Start/End: Original strand, 33436881 - 33437028
Alignment:
Q  673 caacctctatataacttttccgggcacgtagttagaaaaatattgcaattttacgcgttttagtnnnnnnnntcaaaataaattgaggattactcgaaat 772  Q
    ||||||||||||||||||| |||   |  |||| ||||||||||||||||||||||||||||||        ||||||||||| |||||||| || ||||    
T  33436881 caacctctatataactttttcggatgcccagttggaaaaatattgcaattttacgcgttttagtaaaaaat-tcaaaataaatcgaggattaatcaaaat 33436979  T
Q  773 actaagaaaatttgcagatcctctatatgtatttttatagaggtgtctg 821  Q
    ||||  |||||||||||||||||||||||||||||||||||||||||||    
T  33436980 actacaaaaatttgcagatcctctatatgtatttttatagaggtgtctg 33437028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 354 - 471
Target Start/End: Original strand, 35142935 - 35143053
Alignment:
Q  354 ggcagttaactgctgctggctttgatgttttttattatgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaa 453  Q
    ||||||||||||| |||||||||| || ||| ||||||||||||||||||||||||  |||||| |||||||||||||| |||||| |||||||||||||    
T  35142935 ggcagttaactgccgctggctttgctgctttatattatgattttacgcgtttcggtagaaaaattaaaataaatcgaaagttattcagaattctacgaaa 35143034  T
Q  454 ctttacagac-cctctata 471  Q
    ||||| |||| ||||||||    
T  35143035 ctttatagacacctctata 35143053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 354 - 471
Target Start/End: Complemental strand, 40732417 - 40732299
Alignment:
Q  354 ggcagttaactgctgctggctttgatgttttttattatgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaa 453  Q
    ||||||||||||| |||||||||| |  |||||| |||||||||||||||||||||  ||||||||||||||||||||| |||||| |||||||||||||    
T  40732417 ggcagttaactgccgctggctttgctactttttactatgattttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacgaaa 40732318  T
Q  454 ctttacagac-cctctata 471  Q
    ||||| |||| ||||||||    
T  40732317 ctttatagacacctctata 40732299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 354 - 471
Target Start/End: Complemental strand, 9618381 - 9618263
Alignment:
Q  354 ggcagttaactgctgctggctttgatgttttttattatgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaa 453  Q
    ||||||||||||| |||| ||||| || |||||||| |||||||||||||||||||  ||||||||||||||||||||| |||||| |||||||| ||||    
T  9618381 ggcagttaactgccgctgactttgctgctttttattttgattttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctaagaaa 9618282  T
Q  454 ctttacagac-cctctata 471  Q
    ||||| |||| ||||||||    
T  9618281 ctttatagacacctctata 9618263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 672 - 822
Target Start/End: Original strand, 33436569 - 33436719
Alignment:
Q  672 tcaacctctatataacttttccgggcacgtagttagaaaaatattgcaattttacgcgttttagtnnnnnnnntcaaaataaattgaggattactcgaaa 771  Q
    |||||||||||||||| ||| ||| |||  |||| |||||||||||| ||||||||||||| |||        |||||||||||||||| ||| ||||||    
T  33436569 tcaacctctatataaccttttcggacactcagttggaaaaatattgcgattttacgcgtttcagtaaaaaat-tcaaaataaattgagggttagtcgaaa 33436667  T
Q  772 tactaagaaaatttgcagatcctctatatgta-tttttatagaggtgtctgc 822  Q
    |||||  ||||||||||||||||||||||||| |||||||||||||||||||    
T  33436668 tactacaaaaatttgcagatcctctatatgtattttttatagaggtgtctgc 33436719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 230 - 345
Target Start/End: Complemental strand, 38194619 - 38194503
Alignment:
Q  230 aagaaaattgcttttttatatagaaaacttcctattgacacaaataaatgaccaaattact-ccagcggtagttaactgtctctggcatatgcgtcggca 328  Q
    |||||| ||| ||||| | |||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||| ||  ||||    
T  38194619 aagaaagttgttttttgacatagaatacttcctattgacacaagtaaatgaccaaattactcccagcggtagttaactgcctctggcatatacgcaggca 38194520  T
Q  329 gttaattgccgctggct 345  Q
    ||||| |||||||||||    
T  38194519 gttaactgccgctggct 38194503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 745 - 822
Target Start/End: Original strand, 31433085 - 31433162
Alignment:
Q  745 tcaaaataaattgaggattactcgaaatactaagaaaatttgcagatcctctatatgtatttttatagaggtgtctgc 822  Q
    |||||||||||||||||||| || |||||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  31433085 tcaaaataaattgaggattagtctaaatactacgaaaattttcagatcctctatatgtatttttatagaggtgtctgc 31433162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 391 - 458
Target Start/End: Complemental strand, 46641533 - 46641466
Alignment:
Q  391 tgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaacttta 458  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  46641533 tgattttacgtgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaatcctacgaaacttta 46641466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 231 - 342
Target Start/End: Complemental strand, 9618477 - 9618364
Alignment:
Q  231 agaaaattgctttttt-atatagaaaacttcctattgacacaaataaatgaccaaattact-ccagcggtagttaactgtctctggcatatgcgtcggca 328  Q
    |||||| ||||||||| | || ||| ||||||||| ||||||| ||||||||||||||||| ||| ||||||||||||| |||||||||||||| |||||    
T  9618477 agaaaaatgcttttttgacattgaatacttcctatcgacacaagtaaatgaccaaattacttccaacggtagttaactgcctctggcatatgcgccggca 9618378  T
Q  329 gttaattgccgctg 342  Q
    ||||| ||||||||    
T  9618377 gttaactgccgctg 9618364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 257 - 345
Target Start/End: Original strand, 35142866 - 35142955
Alignment:
Q  257 cttcctattgacacaaataaatgaccaaattactcc-agcggtagttaactgtctctggcatatgcgtcggcagttaattgccgctggct 345  Q
    |||||||||||||||| |||||||||||||||| || ||||||||||||||| ||| |||||||||| |||||||||| |||||||||||    
T  35142866 cttcctattgacacaagtaaatgaccaaattacccctagcggtagttaactgcctccggcatatgcgccggcagttaactgccgctggct 35142955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 249 - 345
Target Start/End: Complemental strand, 40732494 - 40732397
Alignment:
Q  249 atagaaaacttcctattgacacaaataaatgaccaaattactcc-agcggtagttaactgtctctggcatatgcgtcggcagttaattgccgctggct 345  Q
    |||||| ||||||||||||||||| ||||||| ||||||||| | ||||||||||||||| |||| ||||||||| |||||||||| |||||||||||    
T  40732494 atagaatacttcctattgacacaagtaaatgatcaaattacttctagcggtagttaactgcctctagcatatgcgccggcagttaactgccgctggct 40732397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 485 - 621
Target Start/End: Original strand, 11014882 - 11015018
Alignment:
Q  485 agagatgtctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaa 584  Q
    |||| ||||||||||||| ||| |||||||||||| | || || || ||||||||||||| || |||| | || | ||||| ||||||||||||||||||    
T  11014882 agaggtgtctgcaaaaaaacagctcaaaattcaatatttaggttgatgttttgatgtttttgtgtcttaaattttaggcgcgttaaaaattcatatttaa 11014981  T
Q  585 tccatccgttctcgaaaaattctaattttttgcggga 621  Q
    ||| ||| || ||||||||||| ||||||||| ||||    
T  11014982 tccgtcccttgtcgaaaaattcaaattttttgtggga 11015018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 328 - 406
Target Start/End: Complemental strand, 55686253 - 55686175
Alignment:
Q  328 agttaattgccgctggctccttcagaggcagttaactgctgctggctttgatgttttttattatgattttacgcgtttc 406  Q
    ||||||||| ||||||||||| || |||||||||||||| | |||||||| ||||||||||||||||||||||||||||    
T  55686253 agttaattgtcgctggctcctccataggcagttaactgccgttggctttgctgttttttattatgattttacgcgtttc 55686175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 485 - 621
Target Start/End: Original strand, 9617789 - 9617925
Alignment:
Q  485 agagatgtctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaa 584  Q
    |||| ||||||||||||  ||| |||||||||||||| ||  | || ||||||||||||| || |||| | || | ||||| ||||||||||||||||||    
T  9617789 agaggtgtctgcaaaaatacagctcaaaattcaatttttagcttgatgttttgatgttttagtgtcttaaattttaggcgcgttaaaaattcatatttaa 9617888  T
Q  585 tccatccgttctcgaaaaattctaattttttgcggga 621  Q
    ||| ||| || ||||||||||| ||||||||| ||||    
T  9617889 tccgtcccttgtcgaaaaattcaaattttttgtggga 9617925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 391 - 463
Target Start/End: Complemental strand, 33437581 - 33437509
Alignment:
Q  391 tgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagac 463  Q
    |||||||||||||||||||| |||||||||||||||| |||||||||||  ||||||||||||||||| ||||    
T  33437581 tgattttacgcgtttcggtcgaaaaatcaaaataaattgaaacttattcaaaattctacgaaactttatagac 33437509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 485 - 621
Target Start/End: Original strand, 50910773 - 50910908
Alignment:
Q  485 agagatgtctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaa 584  Q
    |||| |||||||||||||| || |||||||||||||| || || || ||||||||||||| || |||| | || | ||||| ||||||||||| ||||||    
T  50910773 agaggtgtctgcaaaaaac-agctcaaaattcaatttttaggttgatgttttgatgtttttgtgtcttaaattttaggcgcgttaaaaattcagatttaa 50910871  T
Q  585 tccatccgttctcgaaaaattctaattttttgcggga 621  Q
    ||| ||| || ||||||||||| ||||||||| ||||    
T  50910872 tccgtcccttgtcgaaaaattcaaattttttgtggga 50910908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 373 - 460
Target Start/End: Original strand, 52073609 - 52073696
Alignment:
Q  373 ctttgatgttttttattatgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttaca 460  Q
    ||||| |||||||||||||||||||||| |||| |||  |||||| ||||||||| |||| |||||| ||||||||||||||||||||    
T  52073609 ctttgttgttttttattatgattttacgagttttggttgaaaaattaaaataaattgaaagttattcagaattctacgaaactttaca 52073696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 529 - 622
Target Start/End: Original strand, 31432873 - 31432966
Alignment:
Q  529 gacgttttgatgttttggtttcttgagtt-atcggcgcattaaaaattcatatttaatccatccgttctcgaaaaattctaattttttgcgggaa 622  Q
    |||||||||||||||   ||||||||||| || ||||| ||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||    
T  31432873 gacgttttgatgtttat-tttcttgagtttattggcgcgttaaaaattcatacttaatctatccgttgtcgaaaaattctaattttttgcgggaa 31432966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 391 - 460
Target Start/End: Complemental strand, 31433700 - 31433631
Alignment:
Q  391 tgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttaca 460  Q
    ||||||||||||||||| |||||||||||||||||||||||||| |||| |||||||| |||| ||||||    
T  31433700 tgattttacgcgtttcgatcaaaaaatcaaaataaatcgaaactcattcagaattctatgaaattttaca 31433631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 393 - 621
Target Start/End: Complemental strand, 38194155 - 38193929
Alignment:
Q  393 attttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagaccctctatattttannnnnnnnagagatgt 492  Q
    |||||||||||||| || ||||||||||||||||| |||  ||| ||| ||| ||| |||| ||| |||| ||||||||| |          |||| |||    
T  38194155 attttacgcgtttcagtaaaaaaatcaaaataaattgaagattactcgaaatactaagaaaatttgcagatcctctatatgt--atttttatagaggtgt 38194058  T
Q  493 ctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatccg 592  Q
     ||||||||| ||| |||||||||||||| || || || ||||||||||||| || |||| | || |  |||| ||||||||||||||||||||| |||     
T  38194057 ttgcaaaaaaacagctcaaaattcaatttttaggttgatgttttgatgttttcgtgtcttaaattttaagcgcgttaaaaattcatatttaatccgtccc 38193958  T
Q  593 ttctcgaaaaattctaattttttgcggga 621  Q
       ||||||||||| ||||||||| ||||    
T  38193957 aaatcgaaaaattcaaattttttgtggga 38193929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 391 - 615
Target Start/End: Original strand, 2265797 - 2266010
Alignment:
Q  391 tgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagaccctctatattttannnnnnnnagagat 490  Q
    |||||||||| ||||||||| ||||||||||||||||| ||| |||||   ||| ||| ||||||||||||| | ||||||| |          |||| |    
T  2265797 tgattttacgggtttcggtcgaaaaatcaaaataaatc-aaatttattataaatgctatgaaactttacagatcatctatatgt--atttgtatagaggt 2265893  T
Q  491 gtctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatc 590  Q
    |  ||||||||||||| | ||||||| ||||||| |||||        | |||| |||||||||||| | | ||||||||||||||||||||||||| ||    
T  2265894 gcttgcaaaaaaccagcttaaaattcgatttctaggtcga--------tattttagtttcttgagtttttgacgcattaaaaattcatatttaatccgtc 2265985  T
Q  591 cgttctcgaaaaattctaatttttt 615  Q
    |||| ||| ||||||||||||||||    
T  2265986 cgttgtcggaaaattctaatttttt 2266010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 485 - 621
Target Start/End: Complemental strand, 35143515 - 35143380
Alignment:
Q  485 agagatgtctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaa 584  Q
    |||| ||||||||||||| ||| ||||| |||||||| || || || ||||||||||||| || |||| | || | ||||| ||||||||||||||||||    
T  35143515 agaggtgtctgcaaaaaaacagctcaaa-ttcaatttttaggttgatgttttgatgttttcgtgtcttaaattttaggcgcgttaaaaattcatatttaa 35143417  T
Q  585 tccatccgttctcgaaaaattctaattttttgcggga 621  Q
    ||| ||| || ||||||||||| | ||||||| ||||    
T  35143416 tccgtcccttgtcgaaaaattcaatttttttgtggga 35143380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 535 - 625
Target Start/End: Original strand, 33436756 - 33436846
Alignment:
Q  535 ttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatccgttctcgaaaaattctaattttttgcgggaaatg 625  Q
    |||||||||| || |||| |||| | ||||  ||||||||||||||||||||| ||| || |||||||||| |||||||||||||||||||    
T  33436756 ttgatgttttcgtgtcttaagttttaggcgtgttaaaaattcatatttaatccgtcctttgtcgaaaaattttaattttttgcgggaaatg 33436846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 391 - 472
Target Start/End: Original strand, 31432745 - 31432826
Alignment:
Q  391 tgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagaccctctatat 472  Q
    ||||||||||  |||||||| |||||| |||||||||  ||| |||||| |||||||||||||||||||||||| |||||||    
T  31432745 tgattttacgtatttcggtcgaaaaattaaaataaattaaaatttattcagaattctacgaaactttacagaccatctatat 31432826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 745 - 820
Target Start/End: Complemental strand, 35218839 - 35218764
Alignment:
Q  745 tcaaaataaattgaggattactcgaaatactaagaaaatttgcagatcctctatatgtatttttatagaggtgtct 820  Q
    |||||||||||||||| ||| | ||||| ||| |||| | || |||||||||||||||||||||||||||||||||    
T  35218839 tcaaaataaattgaggcttatttgaaatgctacgaaattctgtagatcctctatatgtatttttatagaggtgtct 35218764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 391 - 463
Target Start/End: Complemental strand, 33437800 - 33437729
Alignment:
Q  391 tgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagac 463  Q
    |||||||||||||||||||| |||||||||||||||| ||||||| ||   ||||||||||||||||| ||||    
T  33437800 tgattttacgcgtttcggtcgaaaaatcaaaataaattgaaactt-tttaaaattctacgaaactttatagac 33437729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 232 - 318
Target Start/End: Original strand, 40730590 - 40730678
Alignment:
Q  232 gaaaattgctttttt-atatagaaaacttcctattgacacaaataaatgaccaaatta-ctccagcggtagttaactgtctctggcata 318  Q
    ||||||||||| ||| | |||||| |||||||||||||| || ||||||||||||||| | ||||| ||||||||||| ||||||||||    
T  40730590 gaaaattgcttctttgacatagaatacttcctattgacaaaagtaaatgaccaaattatcgccagcagtagttaactgcctctggcata 40730678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 745 - 816
Target Start/End: Original strand, 2266146 - 2266217
Alignment:
Q  745 tcaaaataaattgaggattactcgaaatactaagaaaatttgcagatcctctatatgtatttttatagaggt 816  Q
    |||||||||||||||| ||| |  |||||||| | |||||| |||||| |||||||||||||||||||||||    
T  2266146 tcaaaataaattgaggcttagttaaaatactacgtaaattttcagatcatctatatgtatttttatagaggt 2266217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 535 - 585
Target Start/End: Original strand, 35218215 - 35218265
Alignment:
Q  535 ttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaat 585  Q
    ||||||||||||||||||||||| | |||| ||||||||||||||||||||    
T  35218215 ttgatgttttggtttcttgagtttttggcgtattaaaaattcatatttaat 35218265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 536 - 585
Target Start/End: Original strand, 2266255 - 2266304
Alignment:
Q  536 tgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaat 585  Q
    |||||||||||| ||||||||| | |||||||||||||||||||||||||    
T  2266255 tgatgttttggtgtcttgagttttaggcgcattaaaaattcatatttaat 2266304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 745 - 822
Target Start/End: Original strand, 35218415 - 35218492
Alignment:
Q  745 tcaaaataaattgaggattactcgaaatactaagaaaatttgcagatcctctatatgtatttttatagaggtgtctgc 822  Q
    ||||||||||| |||| ||| ||| ||||||  | || |||||||||| |||||||||||||| ||||||||||||||    
T  35218415 tcaaaataaatcgaggcttagtcggaatactgcggaactttgcagatcatctatatgtattttaatagaggtgtctgc 35218492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 404 - 472
Target Start/End: Original strand, 50911015 - 50911084
Alignment:
Q  404 ttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagac-cctctatat 472  Q
    ||||||| ||||||||||||||||||| ||||| ||| ||| ||||||||||||| |||| |||||||||    
T  50911015 ttcggtcgaaaaatcaaaataaatcgagacttagtcgaaatgctacgaaactttatagacacctctatat 50911084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 404 - 471
Target Start/End: Original strand, 33437266 - 33437334
Alignment:
Q  404 ttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagac-cctctata 471  Q
    |||||||||||||||||||||||| || ||||| ||| ||| ||||||||||||| |||| ||||||||    
T  33437266 ttcggtcaaaaaatcaaaataaattgagacttagtcgaaatgctacgaaactttatagacacctctata 33437334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 387 - 621
Target Start/End: Complemental strand, 41534882 - 41534657
Alignment:
Q  387 attatgattttacgcgtttcggtc-aaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagaccctctatattttannnnnnnna 485  Q
    |||||||||||  ||||||||||| ||||||||||||||||||||| |||||| | ||| |||| ||| ||||| || || |||||| |          |    
T  41534882 attatgattttgtgcgtttcggtcgaaaaaatcaaaataaatcgaagcttatttgaaatgctacaaaattttacggatccactatatgt--atttttata 41534785  T
Q  486 gagatgtctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaat 585  Q
     || |||||| |||||||||| ||||| ||||||||||| |||        ||||||||||||  ||||||| | ||||||||||||||| || || |||    
T  41534784 aaggtgtctgtaaaaaaccagctcaaacttcaatttctaggtc--------gatgttttggttcattgagtttttggcgcattaaaaatttattttcaat 41534693  T
Q  586 ccatccgttctcgaaaaattctaattttttgcggga 621  Q
    || ||| || | | |||||||||| |||||| ||||    
T  41534692 ccgtcccttgttggaaaattctaagtttttgtggga 41534657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 535 - 621
Target Start/End: Original strand, 40731871 - 40731957
Alignment:
Q  535 ttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatccgttctcgaaaaattctaattttttgcggga 621  Q
    |||||||||| || |||| | || | ||||| ||||||||||||||||||||  ||| || ||||||||||| ||||||||| ||||    
T  40731871 ttgatgtttttgtgtcttaaattttaggcgcgttaaaaattcatatttaatctgtcccttgtcgaaaaattcaaattttttgtggga 40731957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 52073534 - 52073595
Alignment:
Q  258 ttcctattgacacaaataaatgaccaaattactccagcggtagttaactgtctctggcatatg 320  Q
    ||||||||||||||| |||||||  ||||||||| |||||||||||| ||||| |||||||||    
T  52073534 ttcctattgacacaagtaaatgattaaattactctagcggtagttaattgtct-tggcatatg 52073595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 404 - 472
Target Start/End: Complemental strand, 38193821 - 38193752
Alignment:
Q  404 ttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagac-cctctatat 472  Q
    ||||||| ||||||||||||||||||| ||||| ||| ||| || |||||||||| |||| |||||||||    
T  38193821 ttcggtcgaaaaatcaaaataaatcgagacttagtcgaaatgcttcgaaactttatagacacctctatat 38193752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 392 - 457
Target Start/End: Original strand, 38964568 - 38964633
Alignment:
Q  392 gattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaacttt 457  Q
    |||||| |||||||||||| |||| ||||||||||||||||| |  ||||  ||||||||||||||    
T  38964568 gattttgcgcgtttcggtcgaaaattcaaaataaatcgaaacgttgtcggttttctacgaaacttt 38964633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 404 - 472
Target Start/End: Original strand, 40732067 - 40732136
Alignment:
Q  404 ttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagac-cctctatat 472  Q
    ||||||| ||||||||||||||||||| ||||| ||| ||| ||| ||||||||| |||| |||||||||    
T  40732067 ttcggtcgaaaaatcaaaataaatcgagacttagtcgaaatgctatgaaactttatagacacctctatat 40732136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 745 - 821
Target Start/End: Original strand, 35218106 - 35218182
Alignment:
Q  745 tcaaaataaattgaggattactcgaaatactaagaaaatttgcagatcctctatatgtatttttatagaggtgtctg 821  Q
    |||||||||||| ||| ||| ||  ||| ||| |||| ||| |||||| ||||||| ||||||||||||||||||||    
T  35218106 tcaaaataaattaaggcttattcagaatgctatgaaacttttcagatcgtctatatatatttttatagaggtgtctg 35218182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 783 - 815
Target Start/End: Complemental strand, 42577478 - 42577446
Alignment:
Q  783 tttgcagatcctctatatgtatttttatagagg 815  Q
    |||||||||||||||||||||||||||||||||    
T  42577478 tttgcagatcctctatatgtatttttatagagg 42577446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 256 - 315
Target Start/End: Complemental strand, 55686297 - 55686237
Alignment:
Q  256 acttcctattgacacaaataaatgaccaaatta-ctccagcggtagttaactgtctctggc 315  Q
    |||| |||||||||||| ||||||| ||||||| |||||||||||||||| |||| |||||    
T  55686297 actttctattgacacaagtaaatgatcaaattacctccagcggtagttaattgtcgctggc 55686237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 412 - 463
Target Start/End: Original strand, 2266456 - 2266507
Alignment:
Q  412 aaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagac 463  Q
    ||||| ||||||||||||| ||||| ||||||| ||| ||||||||||||||    
T  2266456 aaaaaacaaaataaatcgagacttagtcggaatgctaagaaactttacagac 2266507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 404 - 463
Target Start/End: Original strand, 9618033 - 9618092
Alignment:
Q  404 ttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagac 463  Q
    ||||||| ||||||||||||||||||| ||||| ||| ||| ||| ||||||||| ||||    
T  9618033 ttcggtcgaaaaatcaaaataaatcgagacttagtcgaaatgctaagaaactttatagac 9618092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 393 - 472
Target Start/End: Original strand, 35218391 - 35218470
Alignment:
Q  393 attttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagaccctctatat 472  Q
    |||||||||| ||||||  |||||||||||||||||||  |||| ||||||| || || |||||| |||| | |||||||    
T  35218391 attttacgcggttcggtagaaaaatcaaaataaatcgaggcttagtcggaatactgcggaactttgcagatcatctatat 35218470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 537 - 612
Target Start/End: Original strand, 42577206 - 42577280
Alignment:
Q  537 gatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatccgttctcgaaaaattctaattt 612  Q
    ||||||||||||||||||||| | ||||  ||||||||||||||||||| | ||| || ||| ||||||| |||||    
T  42577206 gatgttttggtttcttgagttttaggcgt-ttaaaaattcatatttaattcgtcccttgtcggaaaattcaaattt 42577280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 231 - 281
Target Start/End: Original strand, 2772255 - 2772305
Alignment:
Q  231 agaaaattgcttttttatatagaaaacttcctattgacacaaataaatgac 281  Q
    |||||||||||||||||||  ||| |||||||||||||| || ||||||||    
T  2772255 agaaaattgcttttttataatgaatacttcctattgacagaagtaaatgac 2772305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 535 - 621
Target Start/End: Original strand, 33437069 - 33437154
Alignment:
Q  535 ttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatccgttctcgaaaaattctaattttttgcggga 621  Q
    |||||||||| || |||| | || | ||||| ||||||||||||||||||||| |||  | ||||||||||| ||||||||| ||||    
T  33437069 ttgatgttttcgtgtcttaaattttaggcgcgttaaaaattcatatttaatccgtcccctgtcgaaaaattc-aattttttgtggga 33437154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 232 - 276
Target Start/End: Original strand, 32715269 - 32715314
Alignment:
Q  232 gaaaattgctttttt-atatagaaaacttcctattgacacaaataa 276  Q
    ||||||||||||||| | |||| |||||||||||||||||||||||    
T  32715269 gaaaattgcttttttgacataggaaacttcctattgacacaaataa 32715314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 404 - 472
Target Start/End: Complemental strand, 35143272 - 35143203
Alignment:
Q  404 ttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagac-cctctatat 472  Q
    ||||||| |||||| |||||||||||| ||||| ||  ||| ||||||||||||| |||| |||||||||    
T  35143272 ttcggtcgaaaaattaaaataaatcgagacttagtcaaaatgctacgaaactttatagacacctctatat 35143203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 391 - 472
Target Start/End: Original strand, 35218080 - 35218161
Alignment:
Q  391 tgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagaccctctatat 472  Q
    |||||||| | ||||||||| ||||||||||||||||  |  ||||||| |||| ||| |||||||| |||| | |||||||    
T  35218080 tgattttatgtgtttcggtcgaaaaatcaaaataaattaaggcttattcagaatgctatgaaacttttcagatcgtctatat 35218161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 245; Significance: 1e-135; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 245; E-Value: 1e-135
Query Start/End: Original strand, 232 - 875
Target Start/End: Complemental strand, 42001904 - 42001264
Alignment:
Q  232 gaaaattgctttttt-atatagaaaacttcctattgacacaaataaatgaccaaattactcc-agcggtagttaactgtctctggcatatgcgtcggcag 329  Q
    ||||||||||||||| | ||  || ||||| | ||||||||| |||||||||||||||| || | |  |||||||||| || ||||||||| | ||||||    
T  42001904 gaaaattgcttttttgacattcaatacttctttttgacacaagtaaatgaccaaattacccccaccaatagttaactgcctatggcatatgtgccggcag 42001805  T
Q  330 ttaattgccgctggctccttcagaggcagttaactgctgctggctttgatgttttttattatgattttacgcgtttcggtcaaaaaatcaaaataaatcg 429  Q
    |||| ||||||| | |||| ||||| || |||| ||| |||||||||| || |||||||  ||||||||||||||| |||| ||||||||||||||||||    
T  42001804 ttaactgccgctagttcctccagagacaattaattgccgctggctttgctgctttttatcgtgattttacgcgttttggtcgaaaaatcaaaataaatcg 42001705  T
Q  430 aaacttattcggaattctacgaaactttacagaccctctatattttannnnnnnnagagatgtctgcaaaaaaccagatcaaaattcaatttctaagtcg 529  Q
    ||| |||||| |||||||||||||||||||||| ||||||||||||         |||| ||| ||||||||||||||||||||||||||||||| ||||    
T  42001704 aaaattattcagaattctacgaaactttacagatcctctatatttt--tttttttagagctgtatgcaaaaaaccagatcaaaattcaatttctaggtcg 42001607  T
Q  530 acgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatccgttctcgaaaaattctaattttttgcgggaaatgnnnn 629  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| |||||||||| |||||||||| || |||||        
T  42001606 acgttttgatgttttggtttcttgagttattgacgcattaaaaattcatatttaatccatccgttgtcgaaaaattttaattttttgaggaaaatg-ttt 42001508  T
Q  630 nnnnnatgttcttaatatgtgtacnnnnnnnnnnnnnnnnnctcaacctctatataacttttccgggcacgtagttagaaaaatattgcaattttacgcg 729  Q
         |||||||||||||||||||                  |||||||||||||||||||||||  | || |||| |||||||||||||||||||||||    
T  42001507 tttttatgttcttaatatgtgtacaaaaataatgaaaaaat-tcaacctctatataacttttccgaacgcgaagttggaaaaatattgcaattttacgcg 42001409  T
Q  730 ttttagtnnnnnnnntcaaaataaattgaggattactcgaaatactaagaaaatttgcagatcctctatatgtatttttatagaggtgtctgcnnnnnnn 829  Q
    ||| |||        ||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||||||           
T  42001408 tttcagt-aaaaaattcaaaataaattgaggattactcaaaatactaagaaaattttcagatcctttatatgtatttttatagaggtgtctgctaaaaaa 42001310  T
Q  830 cagctcaaaattcaatttttaggttgatattttgatgttttcgtgt 875  Q
    |||||||||||| ||| ||||||||||| |||||||||||||||||    
T  42001309 cagctcaaaatttaatatttaggttgatgttttgatgttttcgtgt 42001264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 368 - 821
Target Start/End: Complemental strand, 27642641 - 27642192
Alignment:
Q  368 gctggctttgatgttttttattatgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagaccctc 467  Q
    |||| |||||||||||||||||||||||||||| ||||||||| |||||| |||||||||| |||||||||  ||||||||||||| |||||||||||||    
T  27642641 gctgactttgatgttttttattatgattttacgtgtttcggtcgaaaaattaaaataaatcaaaacttatttagaattctacgaaattttacagaccctc 27642542  T
Q  468 tatattttannnnnnnnagagatgtctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcat 567  Q
    ||||| |          |||| | |||||||||||||| || ||| |||||||||||||||||||||||||||||||||||||||||||||| | |||||    
T  27642541 tatatat--atttttttagagttttctgcaaaaaaccatattaaagttcaatttctaagtcgacgttttgatgttttggtttcttgagttattgacgcat 27642444  T
Q  568 taaaaattcatatttaatccatccgttctcgaaaaattctaattttttgcgggaaatgnnnnnnnnnatgttcttaatatgtgtacnnnnnnnnnnnnnn 667  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||         |||||||||||||||||||                  
T  27642443 taaaaattcatatttaatccatccgttgtcgaaaaattctaattttttgcggaaaatg--tttttttatgttcttaatatgtgtacaaaaaataattaaa 27642346  T
Q  668 nnnctcaacctctatataacttttccgggcacgtagttagaaaaatattgcaattttacgcgttttagtnnnnnnnntcaaaataaattgaggattactc 767  Q
        |||||||||||||||||||||||| | || |||||||||||||||||||||||| |||||| ||         |||||||||||||||||||||||    
T  27642345 aaattcaacctctatataacttttccggacgcgcagttagaaaaatattgcaattttatgcgtttcaggaaaaaaaatcaaaataaattgaggattactc 27642246  T
Q  768 gaaatactaagaaaatttgcagatcctctatatgtatttttatagaggtgtctg 821  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  27642245 gaaatactaagaaaatttacagatcctctatatgtatttttatagaggtgtctg 27642192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 263 - 862
Target Start/End: Complemental strand, 8816636 - 8816037
Alignment:
Q  263 attgacacaaataaatgaccaaattac-tccagcggtagttaactgtctctggcatatgcgtcggcagttaattgccgctggctccttcagaggcagtta 361  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||| ||||| ||||| || ||| |||||| |||||||||| ||   ||| | |||||    
T  8816636 attgacacaaataaatgactaaattacctccagcggtagttaactgcctctgacatatccggcggtagttaactgccgctggcccc---agaagtagtta 8816540  T
Q  362 actgctgctggctttgatg---tt--------tttta-ttatgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctac 449  Q
    | |||  ||||||||| ||   ||        ||| | || |||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||    
T  8816539 attgcctctggctttgctgcacttaagtgcactttcagttgtgattttacgcgtttcggtcgaaaaatcaaaataaattgaaacttattcagaattctac 8816440  T
Q  450 gaaactttacagaccctctatattttannnnnnnnagagatgtctgcaaaaaa-ccagatcaaaattcaatttctaagtcgacgttttgatgttttggtt 548  Q
    ||||||||||| ||| ||| ||| |          |||| ||||||||||||| |||  |||||||| ||||||||  |||||||||||||        |    
T  8816439 gaaactttacaaaccatctttatat--atttttttagagctgtctgcaaaaaaaccatctcaaaatttaatttctagatcgacgttttgat--------t 8816350  T
Q  549 tcttgagttatcggcgcattaaaaattcatatttaatccatccgttctcgaaaaattctaattttttgcgggaaatgnnnnnnnnnatgttcttaatatg 648  Q
    ||||||||||| ||||||||||||| ||||| |||||| ||||||| ||||||||||||||||||||||||||||||         ||||||||||||||    
T  8816349 tcttgagttattggcgcattaaaaactcatacttaatctatccgttgtcgaaaaattctaattttttgcgggaaatgtgtttttt-atgttcttaatatg 8816251  T
Q  649 tgtacnnnnnnnnnnnnnnnnnctcaacctctatataacttttccgggcacgtagttagaaaaatattgcaattttacgcgttttagtnnnnnnnntcaa 748  Q
    ||| |                  |||||||||||| ||||||||||| | || ||||  ||||||||||||||||||| ||||| |||        ||||    
T  8816250 tgtgcaaaaaataatgaaaaaattcaacctctatagaacttttccggacgcgcagttgaaaaaatattgcaattttactcgtttcagtaaaaaaattcaa 8816151  T
Q  749 aataaattgaggattactcgaaatactaagaaaatttgcagatcctctatatgtatttttatagaggtgtctgcnnnnnnncagctcaaaattcaatttt 848  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||    
T  8816150 aataaattgaggattagtcaaaatactaagaaaatttgcagatcctctatatgtatttttatagaggtgtctgcaaaaaaacagctcaaaattcaatttt 8816051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 125; E-Value: 7e-64
Query Start/End: Original strand, 241 - 471
Target Start/End: Original strand, 42000618 - 42000850
Alignment:
Q  241 ttttttatatagaaaacttcctattgacacaaataaatgaccaaattactcc-agcggtagttaactgtctctggcatatgcgtcggcagttaattgccg 339  Q
    ||||||| || ||| |||||||||||| |||| |||||||||||||||| || | ||||||||||||| ||||||||||||||  ||||||||| |||||    
T  42000618 ttttttacattgaatacttcctattgatacaagtaaatgaccaaattacccccaccggtagttaactgcctctggcatatgcgctggcagttaactgccg 42000717  T
Q  340 ctggctccttcagaggcagttaactgctgctggctttgatgttttttattatgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattc 439  Q
    ||||||||| |||||| ||||||||||  ||||||||| || ||||||||||||||||||||||||| ||| ||||||||||||||||| ||| ||||||    
T  42000718 ctggctcctccagagggagttaactgcctctggctttgctgctttttattatgattttacgcgtttcagtcgaaaaatcaaaataaatcaaaatttattc 42000817  T
Q  440 ggaattctacgaaactttacagac-cctctata 471  Q
     ||||||||||||||||||| ||| ||||||||    
T  42000818 agaattctacgaaactttacggacacctctata 42000850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 391 - 616
Target Start/End: Original strand, 24535705 - 24535928
Alignment:
Q  391 tgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagaccctctatattttannnnnnnnagagat 490  Q
    |||||||||||||||| ||| |||||| |||||||||  |   ||||||||||| ||||||||||||||||| |||||||||            |||| |    
T  24535705 tgattttacgcgtttcagtcgaaaaatgaaaataaataaaggtttattcggaatgctacgaaactttacagatcctctatatgg--atttttatagaggt 24535802  T
Q  491 gtctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatc 590  Q
    ||||  |||||| ||| ||||||||||||||||| ||||| |||||||||||||||||||||||||| | ||||||||||||||||||||||||||  ||    
T  24535803 gtctagaaaaaatcagctcaaaattcaatttctaggtcgatgttttgatgttttggtttcttgagtttttggcgcattaaaaattcatatttaatctgtc 24535902  T
Q  591 cgttctcgaaaaattctaattttttg 616  Q
    |||| ||| |||||||||||||||||    
T  24535903 cgttgtcggaaaattctaattttttg 24535928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 495 - 615
Target Start/End: Original strand, 3152897 - 3153017
Alignment:
Q  495 gcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatccgtt 594  Q
    |||||||| ||| |||||||||||||||||||| |||||||||||||||| |||||||||||| | || |||||||||||||||||||||||||||||||    
T  3152897 gcaaaaaatcagctcaaaattcaatttctaagttgacgttttgatgttttagtttcttgagtttttggtgcattaaaaattcatatttaatccatccgtt 3152996  T
Q  595 ctcgaaaaattctaatttttt 615  Q
     ||||||||||||||||||||    
T  3152997 ttcgaaaaattctaatttttt 3153017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 671 - 863
Target Start/End: Complemental strand, 21543846 - 21543655
Alignment:
Q  671 ctcaacctctatataacttttccgggcacgtagttagaaaaatattgcaattttacgcgttttagtnnnnnnnntcaaaataaattgaggattactcgaa 770  Q
    ||||||||||||||||||||||| | | | ||||| |||||||||||| ||||||||||||| |||        |||||||||||||||| ||| |||||    
T  21543846 ctcaacctctatataacttttccagacgcttagttggaaaaatattgcgattttacgcgtttcagtaaaaaat-tcaaaataaattgaggcttagtcgaa 21543748  T
Q  771 atactaagaaaatttgcagatcctctatatgtatttttatagaggtgtctgcnnnnnnncagctcaaaattcaatttttaggttgatattttg 863  Q
    |||||| | ||||||||| |||||||||||||||||||||||||||||||||       |||||||||| ||||||||||||||||| |||||    
T  21543747 atactacgtaaatttgcaaatcctctatatgtatttttatagaggtgtctgcaaaagaacagctcaaaaatcaatttttaggttgatgttttg 21543655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 391 - 622
Target Start/End: Original strand, 28427066 - 28427295
Alignment:
Q  391 tgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagaccctctatattttannnnnnnnagagat 490  Q
    |||||||||||  ||| ||| |||| ||||||||||||||  |||||| ||||| |||| |||||||| ||| ||||||||| |          |||| |    
T  28427066 tgattttacgcacttcagtcgaaaactcaaaataaatcgaggcttatttggaatgctacaaaactttatagatcctctatatgt--atttttatagaggt 28427163  T
Q  491 gtctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatc 590  Q
    |||||||||||| ||| ||||||||| ||||||||||||| |||||||||||||| ||||||||||| | | ||||||||||||||||||| ||||  ||    
T  28427164 gtctgcaaaaaagcagttcaaaattcgatttctaagtcgatgttttgatgttttgatttcttgagtttttgacgcattaaaaattcatattcaatctgtc 28427263  T
Q  591 cgttctcgaaaaattctaattttttgcgggaa 622  Q
    ||||  ||||||| |||||||||||| |||||    
T  28427264 cgttgccgaaaaactctaattttttgtgggaa 28427295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 508 - 625
Target Start/End: Original strand, 35588258 - 35588375
Alignment:
Q  508 tcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatccgttctcgaaaaattct 607  Q
    |||||||||| |||||| ||||||||| |||||||||||||||||||||||| |||| |||||||||| ||||||||| |||||||| | | ||||||||    
T  35588258 tcaaaattcagtttctaggtcgacgttatgatgttttggtttcttgagttattggcgtattaaaaattaatatttaattcatccgttgttggaaaattct 35588357  T
Q  608 aattttttgcgggaaatg 625  Q
    ||||||||| ||||||||    
T  35588358 aattttttgtgggaaatg 35588375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 357 - 460
Target Start/End: Original strand, 27641628 - 27641731
Alignment:
Q  357 agttaactgctgctggctttgatgttttttattatgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactt 456  Q
    |||||||||| |||||||||| || |||||||||| ||||||| |||||||||  ||||||||||||||||||||| |||||| ||||||||||| ||||    
T  27641628 agttaactgccgctggctttgttgctttttattataattttacacgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacgacactt 27641727  T
Q  457 taca 460  Q
    ||||    
T  27641728 taca 27641731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 391 - 472
Target Start/End: Complemental strand, 21544081 - 21544000
Alignment:
Q  391 tgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagaccctctatat 472  Q
    |||||||||| |||||| || ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  21544081 tgattttacgtgtttcgatcgaaatatcaaaataaatcgaaacttattcggaattttacgaaactttacagaccctctatat 21544000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 356 - 471
Target Start/End: Complemental strand, 2809197 - 2809081
Alignment:
Q  356 cagttaactgctgctggctttgatgttttttattatgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaact 455  Q
    ||||||||||| | |||||| | || ||||||||||||||||| ||||||||||  ||||||||||||||||||||| |||||| ||||||||| |||||    
T  2809197 cagttaactgccgttggcttcgttgctttttattatgattttaagcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaact 2809098  T
Q  456 ttacagac-cctctata 471  Q
    ||| |||| ||||||||    
T  2809097 ttatagacacctctata 2809081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 391 - 465
Target Start/End: Complemental strand, 21544340 - 21544266
Alignment:
Q  391 tgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagaccc 465  Q
    ||||||||||||||||| || ||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  21544340 tgattttacgcgtttcgatcgaaatatcaaaataaatcgaaacttattcggaattttacgaaactttacagaccc 21544266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 492 - 616
Target Start/End: Complemental strand, 28428089 - 28427973
Alignment:
Q  492 tctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatcc 591  Q
    ||||||||||||||| |||||||||||||||||||||||        ||||||||||||||||| | | | | ||||||||||||||||||||||||| |    
T  28428089 tctgcaaaaaaccagctcaaaattcaatttctaagtcga--------tgttttggtttcttgaggttttgacacattaaaaattcatatttaatccatac 28427998  T
Q  592 gttctcgaaaaattctaattttttg 616  Q
     || ||| |||||||||||||||||    
T  28427997 tttgtcgcaaaattctaattttttg 28427973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 232 - 345
Target Start/End: Complemental strand, 2809293 - 2809179
Alignment:
Q  232 gaaaattgctttttt-atatagaaaacttcctattgacacaaataaatgaccaaattactccagcggtagttaactgtctctggcatatgcgtcggcagt 330  Q
    |||||||| |||||| | || ||| ||||| ||||||||||| |||||||||||||||| ||||||||||||||||| |||||| ||||||| || ||||    
T  2809293 gaaaattgtttttttgacattgaatacttcttattgacacaagtaaatgaccaaattaccccagcggtagttaactgcctctgggatatgcgccgacagt 2809194  T
Q  331 taattgccgctggct 345  Q
    ||| ||||| |||||    
T  2809193 taactgccgttggct 2809179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 391 - 468
Target Start/End: Complemental strand, 14109807 - 14109730
Alignment:
Q  391 tgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagaccctct 468  Q
    ||||||||||||||||| || |||||||||||| |||||||||||||||| |||| ||||||||||||||||| ||||    
T  14109807 tgattttacgcgtttcgatcgaaaaatcaaaatgaatcgaaacttattcgaaattttacgaaactttacagactctct 14109730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 672 - 822
Target Start/End: Original strand, 35588421 - 35588570
Alignment:
Q  672 tcaacctctatataacttttccgggcacgtagttagaaaaatattgcaattttacgcgttttagtnnnnnnnntcaaaataaattgaggattactcgaaa 771  Q
    ||||||||||||||| |||||||| |    |||| |||||||||| | ||||||||||||| |||        ||||||||||||||| |||| || |||    
T  35588421 tcaacctctatataaattttccggacgtacagttggaaaaatattacgattttacgcgtttaagtaaaatat-tcaaaataaattgagaattagtcaaaa 35588519  T
Q  772 tactaagaaaatttgcagatcctctatatgtatttttatagaggtgtctgc 822  Q
    ||||| | ||||||||||||| |||| ||||||||||||||||||||||||    
T  35588520 tactacgtaaatttgcagatcatctaaatgtatttttatagaggtgtctgc 35588570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 232 - 339
Target Start/End: Complemental strand, 40678338 - 40678229
Alignment:
Q  232 gaaaattgctttttt-atatagaaaacttcctattgacacaaataaatgaccaaatta-ctccagcggtagttaactgtctctggcatatgcgtcggcag 329  Q
    |||||||| |||||| | |||||| ||||||||||||||||| ||||||||||||||| || || ||||||||||||| ||||| |||||||| ||||||    
T  40678338 gaaaattgtttttttgacatagaatacttcctattgacacaagtaaatgaccaaattatctacaacggtagttaactgcctctgacatatgcgccggcag 40678239  T
Q  330 ttaattgccg 339  Q
    |||| |||||    
T  40678238 ttaactgccg 40678229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 391 - 465
Target Start/End: Complemental strand, 21544599 - 21544525
Alignment:
Q  391 tgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagaccc 465  Q
    ||||||||||||||||| || ||| ||||||||||||||||||||||||  |||| |||||||||||||||||||    
T  21544599 tgattttacgcgtttcgatcgaaatatcaaaataaatcgaaacttattcaaaattttacgaaactttacagaccc 21544525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 382 - 474
Target Start/End: Complemental strand, 40678215 - 40678123
Alignment:
Q  382 tttttattatgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagaccctctatattt 474  Q
    |||||||||||||||||| ||||| |||| ||||||||||||||||| ||| |||||| ||||| ||||||| |||||| | |||||| ||||    
T  40678215 tttttattatgattttacacgttttggtcgaaaaatcaaaataaatcaaaatttattcagaattttacgaaattttacaaatcctctaaattt 40678123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 485 - 616
Target Start/End: Complemental strand, 42001328 - 42001197
Alignment:
Q  485 agagatgtctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaa 584  Q
    |||| ||||||| ||||| ||| |||||||| ||| | || || || ||||||||||||| || |||| | || ||||||| ||||||||||||||||||    
T  42001328 agaggtgtctgctaaaaaacagctcaaaatttaatatttaggttgatgttttgatgttttcgtgtcttaaattttcggcgcgttaaaaattcatatttaa 42001229  T
Q  585 tccatccgttctcgaaaaattctaattttttg 616  Q
    ||  ||| || ||||||||||| |||||||||    
T  42001228 tctgtcccttgtcgaaaaattcaaattttttg 42001197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 752 - 856
Target Start/End: Complemental strand, 14109471 - 14109369
Alignment:
Q  752 aaattgaggattactcgaaatactaagaaaatttgcagatcctctatatgtatttttatagaggtgtctgcnnnnnnncagctcaaaattcaatttttag 851  Q
    ||||| ||| ||| || |||||||| | |||||||||||||| ||||||||||||||||||||||||||||       ||||||||||||||||||||||    
T  14109471 aaatttaggcttagtcaaaatactacgtaaatttgcagatcc-ctatatgtatttttatagaggtgtctgc-aaaacacagctcaaaattcaatttttag 14109374  T
Q  852 gttga 856  Q
    |||||    
T  14109373 gttga 14109369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 747 - 821
Target Start/End: Complemental strand, 28427855 - 28427781
Alignment:
Q  747 aaaataaattgaggattactcgaaatactaagaaaatttgcagatcctctatatgtatttttatagaggtgtctg 821  Q
    |||||||||||||  ||| || |||||| ||| ||||||||| ||||||||||||||||||||||||||||||||    
T  28427855 aaaataaattgagtcttagtcaaaataccaagtaaatttgcaaatcctctatatgtatttttatagaggtgtctg 28427781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 391 - 464
Target Start/End: Complemental strand, 14112946 - 14112874
Alignment:
Q  391 tgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagacc 464  Q
    ||||||||||| || || || ||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  14112946 tgattttacgcatt-cgatcgaaaaatcaaaataaatcgaaacttattcgaaattttacgaaactttacagacc 14112874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 745 - 822
Target Start/End: Original strand, 28427415 - 28427492
Alignment:
Q  745 tcaaaataaattgaggattactcgaaatactaagaaaatttgcagatcctctatatgtatttttatagaggtgtctgc 822  Q
    |||||||||||||||  ||| || |||||||| | | ||||||| |||||||||||||||||||||||||||||||||    
T  28427415 tcaaaataaattgagtcttagtcaaaatactacgtagatttgcatatcctctatatgtatttttatagaggtgtctgc 28427492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 232 - 345
Target Start/End: Original strand, 27641530 - 27641645
Alignment:
Q  232 gaaaattgctttttt-atatagaaaacttcctattgacacaaataaatgaccaaattactc-cagcggtagttaactgtctctggcatatgcgtcggcag 329  Q
    ||||||||||||| | | |||||| |||| |||||||||||| ||||||| |||||||  | |||||||||||||||| ||| |||||||||| ||  ||    
T  27641530 gaaaattgcttttctgacatagaatactttctattgacacaagtaaatgatcaaattatcctcagcggtagttaactgcctcaggcatatgcgccgatag 27641629  T
Q  330 ttaattgccgctggct 345  Q
    |||| |||||||||||    
T  27641630 ttaactgccgctggct 27641645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 747 - 870
Target Start/End: Original strand, 24535733 - 24535856
Alignment:
Q  747 aaaataaattgaggattactcgaaatactaagaaaatttgcagatcctctatatgtatttttatagaggtgtctgcnnnnnnncagctcaaaattcaatt 846  Q
    |||||||||  ||| ||| ||| ||| ||| |||| ||| ||||||||||||||| ||||||||||||||||||         |||||||||||||||||    
T  24535733 aaaataaataaaggtttattcggaatgctacgaaactttacagatcctctatatggatttttatagaggtgtctagaaaaaatcagctcaaaattcaatt 24535832  T
Q  847 tttaggttgatattttgatgtttt 870  Q
    | ||||| ||| ||||||||||||    
T  24535833 tctaggtcgatgttttgatgtttt 24535856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 485 - 621
Target Start/End: Complemental strand, 8816088 - 8815960
Alignment:
Q  485 agagatgtctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaa 584  Q
    |||| ||||||||||||| ||| |||||||||||||| || ||        ||||||||| || |||| | || | ||||| ||||||||||||||||||    
T  8816088 agaggtgtctgcaaaaaaacagctcaaaattcaatttttaggt--------tgatgttttcgtgtcttaaattttaggcgcgttaaaaattcatatttaa 8815997  T
Q  585 tccatccgttctcgaaaaattctaattttttgcggga 621  Q
    ||| ||| || ||||||||||| ||||||||| ||||    
T  8815996 tccgtcccttgtcgaaaaattcaaattttttgtggga 8815960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 404 - 463
Target Start/End: Complemental strand, 42001084 - 42001025
Alignment:
Q  404 ttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagac 463  Q
    ||||||||||||||||||||||||||| ||||| ||| ||| ||||||||||||| ||||    
T  42001084 ttcggtcaaaaaatcaaaataaatcgagacttagtcgaaatgctacgaaactttatagac 42001025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 535 - 621
Target Start/End: Complemental strand, 21543665 - 21543579
Alignment:
Q  535 ttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatccgttctcgaaaaattctaattttttgcggga 621  Q
    ||||||||||||| |||| |||| | ||| | ||||||||||||||||||||| ||| || | ||||||||| ||||||||| ||||    
T  21543665 ttgatgttttggtgtcttaagttttaggcacgttaaaaattcatatttaatccgtcccttgttgaaaaattcaaattttttgtggga 21543579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 747 - 821
Target Start/End: Original strand, 24536475 - 24536549
Alignment:
Q  747 aaaataaattgaggattactcgaaatactaagaaaatttgcagatcctctatatgtatttttatagaggtgtctg 821  Q
    |||||||||||||| ||| | ||||||||| ||||||||| | ||||||||| |||| |||||||||| ||||||    
T  24536475 aaaataaattgaggcttaattgaaatactacgaaaatttgaaaatcctctatctgtagttttatagagatgtctg 24536549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 508 - 557
Target Start/End: Complemental strand, 21543955 - 21543907
Alignment:
Q  508 tcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagtt 557  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  21543955 tcaaaattcaatttctaa-tcgacgttttgatgttttggtatcttgagtt 21543907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 788 - 870
Target Start/End: Original strand, 28427135 - 28427217
Alignment:
Q  788 agatcctctatatgtatttttatagaggtgtctgcnnnnnnncagctcaaaattcaatttttaggttgatattttgatgtttt 870  Q
    |||||||||||||||||||||||||||||||||||       ||| ||||||||| |||| || || ||| ||||||||||||    
T  28427135 agatcctctatatgtatttttatagaggtgtctgcaaaaaagcagttcaaaattcgatttctaagtcgatgttttgatgtttt 28427217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 561 - 621
Target Start/End: Complemental strand, 27642147 - 27642087
Alignment:
Q  561 ggcgcattaaaaattcatatttaatccatccgttctcgaaaaattctaattttttgcggga 621  Q
    ||||||||||||||||||||||||||| ||| || | ||||||||| ||||||||| ||||    
T  27642147 ggcgcattaaaaattcatatttaatccgtcccttgttgaaaaattcaaattttttgtggga 27642087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 404 - 471
Target Start/End: Original strand, 28427726 - 28427794
Alignment:
Q  404 ttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagac-cctctata 471  Q
    ||||||| ||||||||||||||||||| ||||| ||| ||| |||| ||||||||||||| ||||||||    
T  28427726 ttcggtcgaaaaatcaaaataaatcgagacttagtcgtaatgctacaaaactttacagacacctctata 28427794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 747 - 814
Target Start/End: Original strand, 24536053 - 24536120
Alignment:
Q  747 aaaataaattgaggattactcgaaatactaagaaaatttgcagatcctctatatgtatttttatagag 814  Q
    |||||||||||||| ||| | ||||||||| ||||||||| | ||||||||| |||| ||||||||||    
T  24536053 aaaataaattgaggcttaattgaaatactacgaaaatttgaaaatcctctatctgtagttttatagag 24536120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 518 - 585
Target Start/End: Complemental strand, 28992269 - 28992202
Alignment:
Q  518 atttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaat 585  Q
    ||||||| || || |||||||| |||| |||||||||||| | || ||||||||||||||||||||||    
T  28992269 atttctaggttgatgttttgatattttcgtttcttgagtttttggtgcattaaaaattcatatttaat 28992202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 535 - 621
Target Start/End: Original strand, 2808944 - 2809030
Alignment:
Q  535 ttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatccgttctcgaaaaattctaattttttgcggga 621  Q
    |||||||||| || |||| | || | ||||| ||||||||||||||||||||| ||| || ||||||||||  ||||||||| ||||    
T  2808944 ttgatgttttcgtgtcttaaattttaggcgcgttaaaaattcatatttaatccgtcccttgtcgaaaaatttaaattttttgtggga 2809030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 745 - 814
Target Start/End: Original strand, 3153139 - 3153208
Alignment:
Q  745 tcaaaataaattgaggattactcgaaatactaagaaaatttgcagatcctctatatgta-tttttatagag 814  Q
    |||||||| ||||||| ||| ||||||||||| | |||||||||||| ||||||||||| |||||||||||    
T  3153139 tcaaaatatattgaggcttaatcgaaatactatgtaaatttgcagat-ctctatatgtactttttatagag 3153208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 412 - 470
Target Start/End: Original strand, 28991651 - 28991709
Alignment:
Q  412 aaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagaccctctat 470  Q
    |||||||||||||||||||  |||||||||||| |||||| ||||| |||| |||||||    
T  28991651 aaaaatcaaaataaatcgaggcttattcggaatgctacgacactttgcagatcctctat 28991709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 789 - 822
Target Start/End: Complemental strand, 28991995 - 28991962
Alignment:
Q  789 gatcctctatatgtatttttatagaggtgtctgc 822  Q
    ||||||||||||||||||||||||||||||||||    
T  28991995 gatcctctatatgtatttttatagaggtgtctgc 28991962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 565 - 621
Target Start/End: Original strand, 24536188 - 24536244
Alignment:
Q  565 cattaaaaattcatatttaatccatccgttctcgaaaaattctaattttttgcggga 621  Q
    ||||||||||||||||||||||| |||  | ||||||||||| ||||||||| ||||    
T  24536188 cattaaaaattcatatttaatccgtccaatgtcgaaaaattcaaattttttgtggga 24536244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 407 - 463
Target Start/End: Original strand, 24536357 - 24536413
Alignment:
Q  407 ggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagac 463  Q
    |||| ||||||||||||||||| | ||||| ||||||| ||||||||||||| ||||    
T  24536357 ggtcgaaaaatcaaaataaatcaagacttagtcggaatgctacgaaactttatagac 24536413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 565 - 621
Target Start/End: Original strand, 24536610 - 24536666
Alignment:
Q  565 cattaaaaattcatatttaatccatccgttctcgaaaaattctaattttttgcggga 621  Q
    ||||||||||||||||||||||| |||  | ||||||||||| ||||||||| ||||    
T  24536610 cattaaaaattcatatttaatccgtccaatgtcgaaaaattcaaattttttgtggga 24536666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 407 - 463
Target Start/End: Original strand, 24536780 - 24536836
Alignment:
Q  407 ggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagac 463  Q
    |||| ||||||||||||||||| | ||||| ||||||| ||||||||||||| ||||    
T  24536780 ggtcgaaaaatcaaaataaatcaagacttagtcggaatgctacgaaactttatagac 24536836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 412 - 463
Target Start/End: Original strand, 14112802 - 14112852
Alignment:
Q  412 aaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagac 463  Q
    ||||||||||||||||||||||||||| || ||| |||||||||||| ||||    
T  14112802 aaaaatcaaaataaatcgaaacttatttgg-attttacgaaactttatagac 14112852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 404 - 463
Target Start/End: Complemental strand, 21543469 - 21543410
Alignment:
Q  404 ttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagac 463  Q
    ||||||| ||||||||||||||||||| ||||| ||| ||| | ||||||||||| ||||    
T  21543469 ttcggtcgaaaaatcaaaataaatcgagacttagtcgaaatgcaacgaaactttatagac 21543410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 412 - 458
Target Start/End: Complemental strand, 8815841 - 8815795
Alignment:
Q  412 aaaaatcaaaataaatcgaaacttattcggaattctacgaaacttta 458  Q
    ||||||||||||||||||| ||||| ||| ||| |||||||||||||    
T  8815841 aaaaatcaaaataaatcgagacttagtcgaaatgctacgaaacttta 8815795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 778 - 820
Target Start/End: Original strand, 21543371 - 21543413
Alignment:
Q  778 gaaaatttgcagatcctctatatgtatttttatagaggtgtct 820  Q
    |||| |||||| ||||||||||||||||||||||||| |||||    
T  21543371 gaaactttgcacatcctctatatgtatttttatagagatgtct 21543413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 231 - 288
Target Start/End: Complemental strand, 27642729 - 27642672
Alignment:
Q  231 agaaaattgcttttttatatagaaaacttcctattgacacaaataaatgaccaaatta 288  Q
    ||||||||||||||||   ||||| |||||||||||||| |||||||| | |||||||    
T  27642729 agaaaattgcttttttgactagaatacttcctattgacataaataaataatcaaatta 27642672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 392 - 457
Target Start/End: Complemental strand, 28992064 - 28991999
Alignment:
Q  392 gattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaacttt 457  Q
    |||||||| | |||||||| |||||||||||||||||||  |||| |  |||| ||||||||||||    
T  28992064 gattttacacttttcggtcgaaaaatcaaaataaatcgaggcttagttagaatactacgaaacttt 28991999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 789 - 822
Target Start/End: Complemental strand, 28992329 - 28992296
Alignment:
Q  789 gatcctctatatgtatttttatagaggtgtctgc 822  Q
    ||||||||||||||||| ||||||||||||||||    
T  28992329 gatcctctatatgtattgttatagaggtgtctgc 28992296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 258 - 334
Target Start/End: Complemental strand, 38034983 - 38034907
Alignment:
Q  258 ttcctattgacacaaataaatgaccaaattactccagcggtagttaactgtc-tctggcatatgcgtcggcagttaat 334  Q
    ||||||||||||||||||||||||    ||| |||||||| ||||||||||| |  |||| |||||||||||||||||    
T  38034983 ttcctattgacacaaataaatgacatttttattccagcggcagttaactgtcgttaggca-atgcgtcggcagttaat 38034907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 226; Significance: 1e-124; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 261 - 816
Target Start/End: Original strand, 22018452 - 22019002
Alignment:
Q  261 ctattgacacaaataaatgaccaaattactc-cagcggtagttaactgtctctggcatatgcgtcggcagttaattgccgctggctccttcagaggcagt 359  Q
    |||||||||||| |||||||||||||||| | |||||||||||||||| ||||| |||||||| |||||||||| |||||||||||||| ||||||||||    
T  22018452 ctattgacacaagtaaatgaccaaattaccctcagcggtagttaactgcctctgacatatgcgccggcagttaactgccgctggctcctccagaggcagt 22018551  T
Q  360 taactgctgctggctttgatgttttttattatgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttac 459  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| |||||||||||||||| ||    
T  22018552 taactgccgctggctttgatgctttttattatgattttacgcgtttcggtcgaaaaatcaacataaatcgaaacttattcagaattctacgaaacttcac 22018651  T
Q  460 agaccctctatattttannnnnnnnagagatgtctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttat 559  Q
    | |||||||| || |          |||| ||||| | |||||||| ||||||||| ||||| || ||||||||||||||||||||||||||||||||||    
T  22018652 aaaccctctacatat--atttttttagagctgtct-ccaaaaaccatatcaaaattaaatttttaggtcgacgttttgatgttttggtttcttgagttat 22018748  T
Q  560 cggcgcattaaaaattcatatttaatccatccgttctcgaaaaattctaattttttgcgggaaatgnnnnnnnnnatgttcttaatatgtgtacnnnnnn 659  Q
     |  ||| |||||||||||||||||| |||||||| ||| |||||||||||||||||||| |||||         |||||||||||||||||||          
T  22018749 tgatgcactaaaaattcatatttaattcatccgttgtcg-aaaattctaattttttgcggaaaatg-tttgttttatgttcttaatatgtgtacaaaaaa 22018846  T
Q  660 nnnnnnnnnnnctcaacctctatataacttttccgggcacgtagttagaaaaatattgcaattttacgcgttttagtnnnnnnnntcaaaataaattgag 759  Q
                | |||||||||||||||||||||| | || ||||||||||||||||||||||||||||||| |||        | |||| ||||||||    
T  22018847 taatgaaaaaatttaacctctatataacttttccggacgcgcagttagaaaaatattgcaattttacgcgtttcagt-aaaaaattaaaaacaaattgag 22018945  T
Q  760 gattactcgaaatactaagaaaatttgcagatcctctatatgtatttttatagaggt 816  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||    
T  22018946 gattactcgaaatactaataaaatttgaagatcctctatatgtatttttatggaggt 22019002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 357 - 618
Target Start/End: Complemental strand, 9904631 - 9904371
Alignment:
Q  357 agttaactgctgctggctttgatgttttttattatgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactt 456  Q
    ||||||||||  ||| ||||| || |||||||| |||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||    
T  9904631 agttaactgcctctgactttgctgctttttattgtgattttacgcgtttcggtcgaaaaatcaaaataaatcgaaacatattcagaattctacgaaactt 9904532  T
Q  457 tacagaccctctatattttannnnnnnnagagatgtctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagt 556  Q
    |||||||||||||||| | |        ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  9904531 tacagaccctctatatat-attttttttagagatgtctgcaaaaaaccagatcaaaattcaatttctagatcgacgttttgatgttttggtttcttgagt 9904433  T
Q  557 tatcggcgcattaaaaattcatatttaatccatccgttctcgaaaaattctaattttttgcg 618  Q
    ||| ||||||||||||||||||||||||||||||| || ||||| |||||||||||||||||    
T  9904432 tattggcgcattaaaaattcatatttaatccatcctttgtcgaataattctaattttttgcg 9904371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 157; E-Value: 6e-83
Query Start/End: Original strand, 391 - 862
Target Start/End: Original strand, 4221797 - 4222263
Alignment:
Q  391 tgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagaccctct----atattttannnnnnnnag 486  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    ||||||||        ||    
T  4221797 tgattttacgcgtttcgatcgaaaaatcaaaataaatcgaaacttattcagaattctacgaaactttacagaccctctctatatattttatt------ag 4221890  T
Q  487 agatgtctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatc 586  Q
    || |||| |||||||||||  ||||||||||||||||  ||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  4221891 agctgtccgcaaaaaaccaactcaaaattcaatttcttggtccacgttttgatgttttggtttcttgagttattggcgcattaaaaatccatatttaatc 4221990  T
Q  587 catccgttctcgaaaaattctaattttttgcgggaaatgnnnnnnnnnatgttcttaatatgtgtacnnnnnnnnnnnnnnnnnctcaacctctatataa 686  Q
    |||||||| | ||||||||||||||||||||||||||||         |||||||||||||||||                    |||||||||||||||    
T  4221991 catccgttgttgaaaaattctaattttttgcgggaaatg-ttttttttatgttcttaatatgtgtgaaaaaaataatgaaaaaattcaacctctatataa 4222089  T
Q  687 cttttccgggcacgtagttagaaaaatattgcaattttacgcgttttagtnnnnnnnntcaaaataaattgaggattactcgaaatactaagaaaatttg 786  Q
    |||||  |||| ||  ||| |||||||||||||||||||| ||||| |||        |||||||||||||||||||| || |||||||| ||||||||     
T  4222090 cttttttgggcgcgctgttggaaaaatattgcaattttacacgtttcagt-aaaaaattcaaaataaattgaggatta-tcaaaatactacgaaaatttt 4222187  T
Q  787 cagatcctctatatgtatttttatagaggtgtctgcnnnnnnncagctcaaaattcaatttttaggttgatatttt 862  Q
    || |||||||||||||||||||||||| | |||| |       |||||||||||||||||||||||||||| ||||    
T  4222188 caaatcctctatatgtatttttatagatgcgtctacaaacaaacagctcaaaattcaatttttaggttgatgtttt 4222263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 392 - 625
Target Start/End: Complemental strand, 33203363 - 33203131
Alignment:
Q  392 gattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagaccctctatattttannnnnnnnagagatg 491  Q
    ||||||| |||||||| || |||||| |||||||||||||||||||||  ||||||||||||||||||||||| ||||||| | |        |||| ||    
T  33203363 gattttatgcgtttcgttcgaaaaataaaaataaatcgaaacttattcaaaattctacgaaactttacagaccatctatatataatttttt--agagctg 33203266  T
Q  492 tctgcaaaaaa-ccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatc 590  Q
    ||| ||||||| |||| |||||||||||||||||  |||||||||| ||||||||||||| |||||||| ||||||||||||||||||| |||||| |||    
T  33203265 tctacaaaaaaaccagctcaaaattcaatttctagatcgacgttttaatgttttggtttcgtgagttattggcgcattaaaaattcatacttaatctatc 33203166  T
Q  591 cgttctcgaaaaattctaattttttgcgggaaatg 625  Q
    | || ||||||| ||||||||||||||| ||||||    
T  33203165 cattgtcgaaaatttctaattttttgcgcgaaatg 33203131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 230 - 463
Target Start/End: Complemental strand, 22019694 - 22019459
Alignment:
Q  230 aagaaaattgctttttt-atatagaaaacttcctattgacacaaataaatgaccaaattac-tccagcggtagttaactgtctctggcatatgcgtcggc 327  Q
    |||||||||| |||||| | ||| || | ||||||||| ||||| |||||||| ||||||| ||||||| |||||||||  |||||||||||  |||| |    
T  22019694 aagaaaattgtttttttgacataaaatatttcctattggcacaagtaaatgactaaattacctccagcgctagttaactacctctggcatataagtcgac 22019595  T
Q  328 agttaattgccgctggctccttcagaggcagttaactgctgctggctttgatgttttttattatgattttacgcgtttcggtcaaaaaatcaaaataaat 427  Q
    |||||| | ||||||||||||  |||||||||||||| | |||||||||| |  |||||||||| |||||||||||||||||  ||||||||||||||||    
T  22019594 agttaactaccgctggctcctctagaggcagttaactcccgctggctttggtactttttattataattttacgcgtttcggtagaaaaatcaaaataaat 22019495  T
Q  428 cgaaacttattcggaattctacgaaactttacagac 463  Q
     |||| |||||| |||||||||||||||||||||||    
T  22019494 agaaagttattcagaattctacgaaactttacagac 22019459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 672 - 875
Target Start/End: Complemental strand, 9904321 - 9904119
Alignment:
Q  672 tcaacctctatataacttttccgggcacgtagttagaaaaatattgcaattttacgcgttttagtnnnnnnnntcaaaataaattgaggattactcgaaa 771  Q
    |||||||||||||||||||| ||| |  | || | |||||||||||||||||||||||||| |||        ||||||||||||| |||||||||||||    
T  9904321 tcaacctctatataactttttcggacgtgcagatggaaaaatattgcaattttacgcgtttcagtaaaaaat-tcaaaataaattgtggattactcgaaa 9904223  T
Q  772 tactaagaaaatttgcagatcctctatatgtatttttatagaggtgtctgcnnnnnnncagctcaaaattcaatttttaggttgatattttgatgttttc 871  Q
    ||||||||||| || | |||||||||||||||||||||||||| |||||||       ||||||||||||||||||||||||   | |||||||||||||    
T  9904222 tactaagaaaactttctgatcctctatatgtatttttatagagttgtctgcaaaaaaacagctcaaaattcaatttttaggtatgtgttttgatgttttc 9904123  T
Q  872 gtgt 875  Q
    ||||    
T  9904122 gtgt 9904119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 506 - 614
Target Start/End: Complemental strand, 12777050 - 12776942
Alignment:
Q  506 gatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatccgttctcgaaaaatt 605  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| | |||||||||||||||| | ||||||||||    
T  12777050 gatcaaaattcaatttctaagtagacgttttgatgttttggtttcttgagttattggcgcattaaaaaattatatttaatccatccgatgtcgaaaaatt 12776951  T
Q  606 ctaattttt 614  Q
    |||||||||    
T  12776950 ctaattttt 12776942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 499 - 624
Target Start/End: Original strand, 26838093 - 26838218
Alignment:
Q  499 aaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatccgttctcg 598  Q
    |||||||| |||||||||||||||||  | ||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||| ||||||| | |    
T  26838093 aaaaccagctcaaaattcaatttctagattgacgttttgatgttttgatttcttgagttattggcgcattaaaaattcatacttaatctatccgttgttg 26838192  T
Q  599 aaaaattctaattttttgcgggaaat 624  Q
    ||||||| ||||||||||| ||||||    
T  26838193 aaaaattttaattttttgcaggaaat 26838218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 490 - 615
Target Start/End: Complemental strand, 9477290 - 9477165
Alignment:
Q  490 tgtctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccat 589  Q
    |||||||||||||  || ||||||||| ||||||| ||||| |||||||||||||||||||||||||| | ||||||| ||||||||||||||||||| |    
T  9477290 tgtctgcaaaaaagtagctcaaaattcgatttctaggtcgatgttttgatgttttggtttcttgagtttttggcgcatcaaaaattcatatttaatccgt 9477191  T
Q  590 ccgttctcgaaaaattctaatttttt 615  Q
    || || ||| ||||||||||||||||    
T  9477190 cctttgtcggaaaattctaatttttt 9477165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 391 - 471
Target Start/End: Complemental strand, 4222656 - 4222575
Alignment:
Q  391 tgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagac-cctctata 471  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||    
T  4222656 tgattttacacgtttcggtcgaaaaatcaaaataaatcgaaacttattcagaattctatgaaactttacagacacctctata 4222575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 745 - 862
Target Start/End: Complemental strand, 12776816 - 12776699
Alignment:
Q  745 tcaaaataaattgaggattactcgaaatactaagaaaatttgcagatcctctatatgtatttttatagaggtgtctgcnnnnnnncagctcaaaattcaa 844  Q
    |||||||||||||||||||| || ||||| || ||||||||||| ||||| ||||||||||||||||||| ||| |||       |||||||||||||||    
T  12776816 tcaaaataaattgaggattagtcaaaatagtatgaaaatttgcaaatcctatatatgtatttttatagagatgtatgctaaaaaacagctcaaaattcaa 12776717  T
Q  845 tttttaggttgatatttt 862  Q
    |||||| |||||| ||||    
T  12776716 tttttacgttgatgtttt 12776699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 702 - 822
Target Start/End: Complemental strand, 33203057 - 33202938
Alignment:
Q  702 agttagaaaaatattgcaattttacgcgttttagtnnnnnnnntcaaaataaattgaggattactcgaaatactaagaaaatttgcagatcctctatatg 801  Q
    |||| |||||||||||||||||||||||||| |||        |||||||||||| ||||||||||||||||||| |||||||| |||||||||||| ||    
T  33203057 agttggaaaaatattgcaattttacgcgtttcagtaaaaaat-tcaaaataaattaaggattactcgaaatactacgaaaattttcagatcctctatgtg 33202959  T
Q  802 tatttttatagaggtgtctgc 822  Q
    |||| ||||||| || |||||    
T  33202958 tattattatagatgtttctgc 33202938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 391 - 464
Target Start/End: Original strand, 26838012 - 26838085
Alignment:
Q  391 tgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagacc 464  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||  |||||| ||||||||||||||||    
T  26838012 tgattttacgcgtttcggtcgaaatatcaaaataaatcgaaacttattcataattctgcgaaactttacagacc 26838085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 745 - 875
Target Start/End: Original strand, 26838335 - 26838464
Alignment:
Q  745 tcaaaataaattgaggattactcgaaatactaagaaaatttgcagatcctctatatgtatttttatagaggtgtctgcnnnnnnncagctcaaaattcaa 844  Q
    |||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||| | | |||| |           |||||||||||||    
T  26838335 tcaaaataaattgaggattagtcgaaatactaccaaaatttgcagatcctctatatgtatttttagataagtgt-ttaaaaaaaattgctcaaaattcaa 26838433  T
Q  845 tttttaggttgatattttgatgttttcgtgt 875  Q
    ||||||||||| | |||||||||||||||||    
T  26838434 tttttaggttggtgttttgatgttttcgtgt 26838464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 485 - 621
Target Start/End: Complemental strand, 9904183 - 9904047
Alignment:
Q  485 agagatgtctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaa 584  Q
    |||| ||||||||||||| ||| |||||||||||||| || ||    ||||||||||||| || || | | || | ||||| ||||||||||||||||||    
T  9904183 agagttgtctgcaaaaaaacagctcaaaattcaatttttaggtatgtgttttgatgttttcgtgtcataaattttaggcgcgttaaaaattcatatttaa 9904084  T
Q  585 tccatccgttctcgaaaaattctaattttttgcggga 621  Q
    ||| ||| || ||||||||||| ||||||||| ||||    
T  9904083 tccgtccattgtcgaaaaattcaaattttttgtggga 9904047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 535 - 621
Target Start/End: Complemental strand, 12776708 - 12776622
Alignment:
Q  535 ttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatccgttctcgaaaaattctaattttttgcggga 621  Q
    |||||||||| || |||| |||| | ||||| ||||||||||||||||||||||||| || ||||||||||| ||||||||| ||||    
T  12776708 ttgatgttttcgtgtcttaagttttaggcgcgttaaaaattcatatttaatccatcccttgtcgaaaaattcaaattttttgtggga 12776622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 395 - 471
Target Start/End: Complemental strand, 26839147 - 26839070
Alignment:
Q  395 tttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagac-cctctata 471  Q
    ||||||||||||| || ||||||||||||||||||||||  |||| ||||| ||||||||||||||||| ||||||||    
T  26839147 tttacgcgtttcgttcgaaaaatcaaaataaatcgaaacccattcagaattatacgaaactttacagacacctctata 26839070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 498 - 610
Target Start/End: Original strand, 9487646 - 9487758
Alignment:
Q  498 aaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatccgttctc 597  Q
    ||||||||| ||||||||| ||||||| ||||| ||||||||||| |||||||||||||| |   ||| | ||||||||||||||||||  |||  | ||    
T  9487646 aaaaaccagctcaaaattcgatttctaggtcgatgttttgatgttatggtttcttgagtttttaacgcgtcaaaaattcatatttaatctgtcccctgtc 9487745  T
Q  598 gaaaaattctaat 610  Q
    | |||||||||||    
T  9487746 ggaaaattctaat 9487758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 382 - 431
Target Start/End: Original strand, 9903636 - 9903685
Alignment:
Q  382 tttttattatgattttacgcgtttcggtcaaaaaatcaaaataaatcgaa 431  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  9903636 tttttattatgattttacgcgtttcggtcgaaaaattaaaataaatcgaa 9903685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 391 - 471
Target Start/End: Original strand, 12776250 - 12776331
Alignment:
Q  391 tgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagac-cctctata 471  Q
    ||||||||| ||||| | || ||||||||||||||||||||| |||||| ||||||||| ||| ||||||||| ||||||||    
T  12776250 tgattttacacgttttgatcgaaaaatcaaaataaatcgaaatttattcagaattctacaaaattttacagacacctctata 12776331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 232 - 313
Target Start/End: Complemental strand, 9904700 - 9904617
Alignment:
Q  232 gaaaattgctttttt-atatagaaaacttcctattgacacaaataaatgaccaaattact-ccagcggtagttaactgtctctg 313  Q
    ||||||||||||||| | || ||| |||| |||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||    
T  9904700 gaaaattgcttttttgacattgaatactttctattgacacaagtaaatgaccaaattactcccatcggtagttaactgcctctg 9904617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 404 - 472
Target Start/End: Original strand, 22019223 - 22019292
Alignment:
Q  404 ttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagac-cctctatat 472  Q
    ||||||| ||||||||||||||||||| ||||| ||| ||| ||||||||||||| |||| |||||||||    
T  22019223 ttcggtcgaaaaatcaaaataaatcgagacttagtcgaaatgctacgaaactttatagacacctctatat 22019292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 391 - 471
Target Start/End: Original strand, 33202422 - 33202503
Alignment:
Q  391 tgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagac-cctctata 471  Q
    |||||||||||| ||||||| |||||||||||||||||||| |  |||| ||||| ||||||| |||| |||| ||||||||    
T  33202422 tgattttacgcgcttcggtcgaaaaatcaaaataaatcgaaccgaattcagaattgtacgaaaatttatagacacctctata 33202503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 535 - 621
Target Start/End: Original strand, 22019028 - 22019114
Alignment:
Q  535 ttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatccgttctcgaaaaattctaattttttgcggga 621  Q
    |||||||||| || |||| | || | ||||| ||||||||||||||||||||| ||| || |||||||| || ||||||||| ||||    
T  22019028 ttgatgttttcgtgtcttaaattttaggcgcgttaaaaattcatatttaatccgtcccttgtcgaaaaactcaaattttttgtggga 22019114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 263 - 344
Target Start/End: Complemental strand, 33203502 - 33203420
Alignment:
Q  263 attgacacaaataaatgaccaaatta-ctccagcggtagttaactgtctctggcatatgcgtcggcagttaattgccgctggc 344  Q
    |||||||||| ||||||||||||||| |||| | || ||||||||| ||||||||| | || |||||||||| ||| ||||||    
T  33203502 attgacacaagtaaatgaccaaattacctccggtgggagttaactgcctctggcatgttcgccggcagttaactgcagctggc 33203420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 508 - 621
Target Start/End: Original strand, 26838423 - 26838536
Alignment:
Q  508 tcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatccgttctcgaaaaattct 607  Q
    |||||||||||||| || || |  ||||||||||||| || |||| | || | ||||| ||||||||| |||| |||| | ||| || |||||||||||     
T  26838423 tcaaaattcaatttttaggttggtgttttgatgttttcgtgtcttaaattttaggcgcgttaaaaattaatatctaattcttcccttgtcgaaaaattca 26838522  T
Q  608 aattttttgcggga 621  Q
    ||||||||| ||||    
T  26838523 aattttttgtggga 26838536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 263 - 344
Target Start/End: Complemental strand, 26839289 - 26839207
Alignment:
Q  263 attgacacaaataaatgaccaaattactcca--gcggtagttaactgtctctggcatatgcgtcggcagttaattgccgctggc 344  Q
    |||||||||| ||||||||||||||| ||||  |||| ||||||||| ||||||||||| || |  ||||||| ||||||||||    
T  26839289 attgacacaagtaaatgaccaaatta-tccatcgcggcagttaactgcctctggcatatccgacatcagttaactgccgctggc 26839207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 778 - 820
Target Start/End: Original strand, 9903841 - 9903883
Alignment:
Q  778 gaaaatttgcagatcctctatatgtatttttatagaggtgtct 820  Q
    |||| |||||| ||| |||||||||||||||||||||||||||    
T  9903841 gaaactttgcacatcatctatatgtatttttatagaggtgtct 9903883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 768 - 855
Target Start/End: Original strand, 10231955 - 10232042
Alignment:
Q  768 gaaatactaagaaaatttgcagatcctctatatgtatttttatagaggtgtctgcnnnnnnncagctcaaaattcaatttttaggttg 855  Q
    ||||||||| |||| |||||||||||| ||||||||||| |||||| |  |||||       | ||||||||||| ||||||||||||    
T  10231955 gaaatactatgaaattttgcagatcctttatatgtatttctatagatgcatctgcaaacaatctgctcaaaattcgatttttaggttg 10232042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 489 - 557
Target Start/End: Complemental strand, 25196729 - 25196662
Alignment:
Q  489 atgtctgcaaaaaaccagatcaaaattcaatttctaagtcgacg-ttttgatgttttggtttcttgagtt 557  Q
    |||||||||||||||||  |||||||| |||||||||||||| | ||||| ||||||  |||||||||||    
T  25196729 atgtctgcaaaaaaccaattcaaaatttaatttctaagtcgaggattttgttgtttt--tttcttgagtt 25196662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 537 - 591
Target Start/End: Original strand, 25915160 - 25915214
Alignment:
Q  537 gatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatcc 591  Q
    |||||||||||||||||| || | | ||| ||||||||||||||| |||||||||    
T  25915160 gatgttttggtttcttgattttttgacgcgttaaaaattcatattcaatccatcc 25915214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 567 - 616
Target Start/End: Complemental strand, 9491064 - 9491015
Alignment:
Q  567 ttaaaaattcatatttaatccatccgttctcgaaaaattctaattttttg 616  Q
    ||||||||||||| ||||||| ||  || |||||||||||||||||||||    
T  9491064 ttaaaaattcataattaatccgtctcttatcgaaaaattctaattttttg 9491015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 535 - 616
Target Start/End: Complemental strand, 33202906 - 33202825
Alignment:
Q  535 ttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatccgttctcgaaaaattctaattttttg 616  Q
    |||||||||| || |||| | || | ||||| |||||||||||||||||||   ||| || ||||||||||| |||||||||    
T  33202906 ttgatgttttcgtgtcttaaattttaggcgctttaaaaattcatatttaatttgtcccttgtcgaaaaattcaaattttttg 33202825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 226; Significance: 1e-124; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 354 - 862
Target Start/End: Complemental strand, 31298802 - 31298298
Alignment:
Q  354 ggcagttaactgctgctggctttgatgttttttattatgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaa 453  Q
    ||||||||||||| |||||||||| || ||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||| |||||||||||||    
T  31298802 ggcagttaactgccgctggctttgctgctttttattatgattttacgcgtttcggttgaaaaatcaaaataaatcgaaatttattcagaattctacgaaa 31298703  T
Q  454 ctttacagaccctctatattttannnnnnnnagagatgtctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttg 553  Q
    |||| |||| ||||| ||| |          |||| |||||||||||||||| |||||||||||||||||| |||||||| |||||||||||||||||||    
T  31298702 ctttgcagatcctctttatat--atttttttagagctgtctgcaaaaaaccaaatcaaaattcaatttctaggtcgacgtcttgatgttttggtttcttg 31298605  T
Q  554 agttatcggcgcattaaaaattcatatttaatccatccgttctcgaaaaattctaattttttgcgggaaatgnnnnnnnnnatgttcttaatatgtgtac 653  Q
    |||||| || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||         |||||||||||||||||||    
T  31298604 agttattggtgcattaaaaattcatatttaatccatccgttgtcgaaaaattctaattttttgcgggaaatg-ttttttttatgttcttaatatgtgtac 31298506  T
Q  654 nnnnnnnnnnnnnnnnnctcaacctctatataacttttccgggcacgtagttagaaaaatattgcaattttacgcgttttagtnnnnnnnntcaaaataa 753  Q
                      ||||||||||| |||||||||| | | || ||||||||||||||||||||||||||||||| |||        | |||||||    
T  31298505 aaaaaaaaatgaaaaaattcaacctctatctaacttttccagacgcgcagttagaaaaatattgcaattttacgcgtttcagtaaaaaaatt-aaaataa 31298407  T
Q  754 attgaggattactcgaaatactaagaaaatttgcagatcctctatatgtatttttatagaggtgtctgcnnnnnnncagctcaaaattcaatttttaggt 853  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||    
T  31298406 attgaggattactagaaatactaagaaaatttacagatcctctatatgtatttttatagaggtgtctgcaaaaaaacagctcaaaattcaatttttaggt 31298307  T
Q  854 tgatatttt 862  Q
    |||| ||||    
T  31298306 tgatgtttt 31298298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 261 - 816
Target Start/End: Original strand, 44328560 - 44329110
Alignment:
Q  261 ctattgacacaaataaatgaccaaattactc-cagcggtagttaactgtctctggcatatgcgtcggcagttaattgccgctggctccttcagaggcagt 359  Q
    |||||||||||| |||||||||||||||| | |||||||||||||||| ||||| |||||||| |||||||||| |||||||||||||| ||||||||||    
T  44328560 ctattgacacaagtaaatgaccaaattaccctcagcggtagttaactgcctctgacatatgcgccggcagttaactgccgctggctcctccagaggcagt 44328659  T
Q  360 taactgctgctggctttgatgttttttattatgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttac 459  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| |||||||||||||||| ||    
T  44328660 taactgccgctggctttgatgctttttattatgattttacgcgtttcggtcgaaaaatcaacataaatcgaaacttattcagaattctacgaaacttcac 44328759  T
Q  460 agaccctctatattttannnnnnnnagagatgtctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttat 559  Q
    | |||||||| || |          |||| ||||| | |||||||| ||||||||| ||||| || ||||||||||||||||||||||||||||||||||    
T  44328760 aaaccctctacatat--atttttttagagctgtct-ccaaaaaccatatcaaaattaaatttttaggtcgacgttttgatgttttggtttcttgagttat 44328856  T
Q  560 cggcgcattaaaaattcatatttaatccatccgttctcgaaaaattctaattttttgcgggaaatgnnnnnnnnnatgttcttaatatgtgtacnnnnnn 659  Q
     |  ||| |||||||||||||||||| |||||||| ||| |||||||||||||||||||| |||||         |||||||||||||||||||          
T  44328857 tgatgcactaaaaattcatatttaattcatccgttgtcg-aaaattctaattttttgcggaaaatg-tttgttttatgttcttaatatgtgtacaaaaaa 44328954  T
Q  660 nnnnnnnnnnnctcaacctctatataacttttccgggcacgtagttagaaaaatattgcaattttacgcgttttagtnnnnnnnntcaaaataaattgag 759  Q
                | |||||||||||||||||||||| | || ||||||||||||||||||||||||||||||| |||        | |||| ||||||||    
T  44328955 taatgaaaaaatttaacctctatataacttttccggacgcgcagttagaaaaatattgcaattttacgcgtttcagt-aaaaaattaaaaacaaattgag 44329053  T
Q  760 gattactcgaaatactaagaaaatttgcagatcctctatatgtatttttatagaggt 816  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||    
T  44329054 gattactcgaaatactaataaaatttgaagatcctctatatgtatttttatggaggt 44329110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 181; E-Value: 3e-97
Query Start/End: Original strand, 256 - 625
Target Start/End: Original strand, 15629300 - 15629656
Alignment:
Q  256 acttcctattgacacaaataaatgaccaaattactccagcggtagttaactgtctctggcatatgcgtcggcagttaattgccgctggctccttcagagg 355  Q
    |||||||||||| |||| ||||||| ||||||||||||||| |||||||||| |||||||||||||  || ||||||| |||||||||||||| ||||||    
T  15629300 acttcctattgatacaagtaaatgatcaaattactccagcgatagttaactgcctctggcatatgcaccgacagttaactgccgctggctcctccagagg 15629399  T
Q  356 cagttaactgctgctggctttgatgttttttattatgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaact 455  Q
    |||||           |||||| || |||||||| | ||||| |||||||||||| |||||| ||||||||||||||||||||| |||||||||||||||    
T  15629400 cagtt-----------gctttgctgctttttattgtaattttgcgcgtttcggtcgaaaaattaaaataaatcgaaacttattcagaattctacgaaact 15629488  T
Q  456 ttacagaccctctatattttannnnnnnnagagatgtctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgag 555  Q
    |||  ||||||| |||| |          |||| ||||| ||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||    
T  15629489 ttatggaccctcaatatat--atttttttagagttgtctccaaaaaaccagatcaaagttcaatttctaggtcgacgttttgattttttggtttcttgag 15629586  T
Q  556 ttatcggcgcattaaaaattcatatttaatccatccgttctcgaaaaattctaattttttgcgggaaatg 625  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  15629587 ttattggcgcattaaaaattcatatttaatccatccgttgtcgaaaaattctaattttttgcgggaaatg 15629656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 172; E-Value: 6e-92
Query Start/End: Original strand, 357 - 822
Target Start/End: Original strand, 6172176 - 6172627
Alignment:
Q  357 agttaactgctgctggctttgatgttttttattatgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactt 456  Q
    |||||||||||||||  |||| || ||||||||||||||||||| |||||| || |||||||          ||||||||||| ||||||||||||||||    
T  6172176 agttaactgctgctgattttgctgctttttattatgattttacgtgtttcgatcgaaaaatc----------gaaacttattcagaattctacgaaactt 6172265  T
Q  457 tacagaccctctatattttannnnnnnnagagatgtctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagt 556  Q
    |||||| ||||||| || ||        |||| ||||| ||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  6172266 tacagaacctctat-ttatattttttc-agagctgtctacaaaaaatcagatcaaaaatcaatttctaggtcgacgttttgatgttttggtttcttgagt 6172363  T
Q  557 tatcggcgcattaaaaattcatatttaatccatccgttctcgaaaaattctaattttttgcgggaaatgnnnnnnnnnatgttcttaatatgtgtacnnn 656  Q
    ||| | |||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||          |||||||||||||||||||       
T  6172364 tattgccgcattaaaaattcatatttaatccatccgttgtcgaaaaattctaattttttgcaggaaat-attttttttatgttcttaatatgtgtacaaa 6172462  T
Q  657 nnnnnnnnnnnnnnctcaacctctatataacttttccgggcacgtagttagaaaaatattgcaattttacgcgttttagtnnnnnnnntcaaaataaatt 756  Q
                   ||||| |||||||||||||||||| | || ||||||||||||||||||||||||||||||| | |        | ||||||||||    
T  6172463 aaataatgaaaaaattcaacttctatataacttttccggacgcgcagttagaaaaatattgcaattttacgcgtttcaataaaaaaatt-aaaataaatt 6172561  T
Q  757 gaggattactcgaaatactaagaaaatttgcagatcctctatatgtatttttatagaggtgtctgc 822  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6172562 gaggattactcgaaatactaagaaaatttgcagatcctctatatgtatttttatagaggtgtctgc 6172627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 356 - 615
Target Start/End: Original strand, 44655432 - 44655688
Alignment:
Q  356 cagttaactgctgctggctttgatgttttttattatgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaact 455  Q
    ||||||||||| |||| ||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||||||||||||    
T  44655432 cagttaactgccgctgactttgctgctttttattatgattttacgcgtttcggtcgaaaaatcaaaataaatcgaaatttattcagaattctacgaaact 44655531  T
Q  456 ttacagaccctctatattttannnnnnnnagagatgtctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgag 555  Q
    ||||| ||||||||||| | |        |||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  44655532 ttacaaaccctctatatataattttt---agagttgtctgcaaaacaccagatcaaaattcaatttctaggtcgacgttttgatgttttggtttcttgag 44655628  T
Q  556 ttatcggcgcattaaaaattcatatttaatccatccgttctcgaaaaattctaatttttt 615  Q
    |||| |||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  44655629 ttattggcgtattaaaaattcatatttaatccatccgttgtcgaaaagttctaatttttt 44655688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 135; E-Value: 8e-70
Query Start/End: Original strand, 232 - 471
Target Start/End: Original strand, 31297640 - 31297881
Alignment:
Q  232 gaaaattgctttttt-atatagaaaacttcctattgacacaaataaatgaccaaattac-tccagcggtagttaactgtctctggcatatgcgtcggcag 329  Q
    ||||||||||||| | | |||||| ||||||||||||||||| ||||||| |||||||| |||| ||||||||||||||| |||||||||||| ||||||    
T  31297640 gaaaattgcttttctgacatagaatacttcctattgacacaagtaaatgatcaaattacctccaacggtagttaactgtc-ctggcatatgcgccggcag 31297738  T
Q  330 ttaattgccgctggctccttcagaggcagttaactgctgctggctttgatgttttttattatgattttacgcgtttcggtcaaaaaatcaaaataaatcg 429  Q
    |||| |||||||||||||| ||||||||||||||||| ||| | |||| || ||||||||||||||||||||||||||||  ||||||||||||||||||    
T  31297739 ttaactgccgctggctcctccagaggcagttaactgccgcttggtttgctgctttttattatgattttacgcgtttcggtagaaaaatcaaaataaatcg 31297838  T
Q  430 aaacttattcggaattctacgaaactttacagac-cctctata 471  Q
    ||| |||||| ||||||||||| ||||||||||| ||||||||    
T  31297839 aaagttattcagaattctacgatactttacagacacctctata 31297881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 513 - 871
Target Start/End: Original strand, 36583552 - 36583916
Alignment:
Q  513 attcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatccgttctcgaaaaattctaattt 612  Q
    ||||||||| ||  ||||||||||||||||||| ||| ||||||||| |||||||||||||||| |||||||| |||||||| |||||||||| ||||||    
T  36583552 attcaatttttagatcgacgttttgatgttttgattt-ttgagttattggcgcattaaaaattcgtatttaattcatccgttgtcgaaaaattttaattt 36583650  T
Q  613 tttgcgggaaatgnnnnnnnnn-atgttcttaatatgtgtacnnnnnnnnnnnnnnnnnctcaacctctatataacttttccgggcacgtagttagaaaa 711  Q
    |||||||||||||          ||||| |||||||||||||                  |||||||||||||||||||||| | | || ||||  ||||    
T  36583651 tttgcgggaaatgttttttttttatgtttttaatatgtgtacaaaaaataatgaaaaaattcaacctctatataacttttccagacgcgcagttgaaaaa 36583750  T
Q  712 atattgcaattttacgcgttttagtnnnnnnnntcaaaataaattgaggattactcgaaatactaagaaaatttgcagatcctctatatgtatttttata 811  Q
    ||||||||||||||||||||| |||        |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  36583751 atattgcaattttacgcgtttcagtaaaatat-tcaaaataaattgaggattactcgaaatactaagaaaatttgcagatcctttatatgtatttttata 36583849  T
Q  812 gaggtgtctgc-------nnnnnnncagctcaaaattcaatttttaggttgatattttgatgttttc 871  Q
    |||||||||||              || ||||||||||||||||||||||||| |||||||||||||    
T  36583850 gaggtgtctgcaaaaaaaaaaaaaacaactcaaaattcaatttttaggttgatgttttgatgttttc 36583916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 672 - 875
Target Start/End: Original strand, 44655745 - 44655949
Alignment:
Q  672 tcaacctctatataacttttccgggcacgtagttagaaaaatattgcaattttacgcgttttagtnnnnnnnntcaaaataaattgaggattactcgaaa 771  Q
    |||||||||||| ||||||| ||| |||| ||||||||||||||||||||||||||||||| | |        |||||||||||||||||||||||||||    
T  44655745 tcaacctctataaaactttttcggacacgcagttagaaaaatattgcaattttacgcgtttcaataaaaaaa-tcaaaataaattgaggattactcgaaa 44655843  T
Q  772 tactaagaaaatttgcagatcctctatatgtatttttatagaggtgtctgc--nnnnnnncagctcaaaattcaatttttaggttgatattttgatgttt 869  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||| |||||||||||    
T  44655844 tactaagaaaattttcagatcctctatatgtatttttatagaggtgtctgcaaaaaaaaacagctcaaaattcaatttttaggttgatgttttgatgttt 44655943  T
Q  870 tcgtgt 875  Q
    ||||||    
T  44655944 tcgtgt 44655949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 672 - 875
Target Start/End: Original strand, 15629678 - 15629880
Alignment:
Q  672 tcaacctctatataacttttccgggcacgtagttagaaaaatattgcaattttacgcgttttagtnnnnnnnntcaaaataaattgaggattactcgaaa 771  Q
    ||||||||||||||||||||  || | || |||| |||||||||||||||||||||||||| |||        ||||||||||||||||||||||| |||    
T  15629678 tcaacctctatataacttttttggacgcgcagttggaaaaatattgcaattttacgcgtttcagtaaaaaat-tcaaaataaattgaggattactctaaa 15629776  T
Q  772 tactaagaaaatttgcagatcctctatatgtatttttatagaggtgtctgcnnnnnnncagctcaaaattcaatttttaggttgatattttgatgttttc 871  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||||       |||||||||||||||||||||||||||| |||||||||||||    
T  15629777 tactaagaaaattttcagatcctctatatgtatttgtatagaggtgtctgcaaaaaaacagctcaaaattcaatttttaggttgatgttttgatgttttc 15629876  T
Q  872 gtgt 875  Q
    ||||    
T  15629877 gtgt 15629880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 230 - 463
Target Start/End: Complemental strand, 44329802 - 44329567
Alignment:
Q  230 aagaaaattgctttttt-atatagaaaacttcctattgacacaaataaatgaccaaattac-tccagcggtagttaactgtctctggcatatgcgtcggc 327  Q
    |||||||||| |||||| | ||| || | ||||||||| ||||| |||||||| ||||||| ||||||| |||||||||  |||||||||||  |||| |    
T  44329802 aagaaaattgtttttttgacataaaatatttcctattggcacaagtaaatgactaaattacctccagcgctagttaactacctctggcatataagtcgac 44329703  T
Q  328 agttaattgccgctggctccttcagaggcagttaactgctgctggctttgatgttttttattatgattttacgcgtttcggtcaaaaaatcaaaataaat 427  Q
    |||||| | ||||||||||||  |||||||||||||| | |||||||||| |  |||||||||| |||||||||||||||||  ||||||||||||||||    
T  44329702 agttaactaccgctggctcctctagaggcagttaactcccgctggctttggtactttttattataattttacgcgtttcggtagaaaaatcaaaataaat 44329603  T
Q  428 cgaaacttattcggaattctacgaaactttacagac 463  Q
     |||| |||||| |||||||||||||||||||||||    
T  44329602 agaaagttattcagaattctacgaaactttacagac 44329567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 232 - 345
Target Start/End: Complemental strand, 31298897 - 31298782
Alignment:
Q  232 gaaaattgctttttt-atatagaaaacttcctattgacacaaataaatgaccaaattactcc-agcggtagttaactgtctctggcatatgcgtcggcag 329  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  31298897 gaaaattgcttttttgatatagaaaacttcctattgacacaagtaaatgaccaaattactcccagcggtagttaactgcctctggcatatgcgtcggcag 31298798  T
Q  330 ttaattgccgctggct 345  Q
    |||| |||||||||||    
T  31298797 ttaactgccgctggct 31298782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 230 - 471
Target Start/End: Complemental strand, 36584531 - 36584299
Alignment:
Q  230 aagaaaattgctttttt-atatagaaaacttcctattgacacaaataaatgaccaaattac-tccagcggtagttaactgtctctggcatatgcgtcggc 327  Q
    ||||||||||||||||| | || ||| |||||||||| |||||| || ||||| ||||||| | |||||||||||||||| |||||| ||||||| ||||    
T  36584531 aagaaaattgctttttttacattgaatacttcctatt-acacaagtacatgactaaattacctacagcggtagttaactgcctctggtatatgcgccggc 36584433  T
Q  328 agttaattgccgctggctccttcagaggcagttaactgctgctggctttgatgttttttattatgattttacgcgtttcggtcaaaaaatcaaaataaat 427  Q
           |||||||||||||   ||||||||||||||||   |||||||| || ||| |||||||||||||||||||||| || ||||||||||| ||||    
T  36584432 -------tgccgctggctcc---agaggcagttaactgcct-tggctttgctgctttatattatgattttacgcgtttcgatcgaaaaatcaaaacaaat 36584344  T
Q  428 cgaaacttattcggaattctacgaaactttacagac-cctctata 471  Q
    ||||| |||||| ||||||||||||||||||||||| ||||||||    
T  36584343 cgaaagttattcagaattctacgaaactttacagacacctctata 36584299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 354 - 524
Target Start/End: Original strand, 31477 - 31645
Alignment:
Q  354 ggcagttaactgctgctggctttgatgttttttattatgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaa 453  Q
    ||||||||||||| |||||||| | || |||||||||| ||||||||| ||| |||| ||||||||||||||||||||||||||||  ||||||||||||    
T  31477 ggcagttaactgccgctggcttggctgctttttattataattttacgcattttggtcgaaaaatcaaaataaatcgaaacttattcaaaattctacgaaa 31576  T
Q  454 ctttacagaccctctatattttannnnnnnnagagatgtctgcaaaaaaccagatcaaaattcaatttcta 524  Q
    ||||| ||||||||||||| |          |||| ||| |||||||||||||||||||||||||||||||    
T  31577 ctttatagaccctctatatat--atttttttagagttgtatgcaaaaaaccagatcaaaattcaatttcta 31645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 391 - 625
Target Start/End: Original strand, 40439992 - 40440215
Alignment:
Q  391 tgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagaccctctatattttannnnnnnnagagat 490  Q
    |||||||| ||||||| ||| |||||||||||||||||||  |||||||||||| ||||||||||||||||| |||||| || | |        |||| |    
T  40439992 tgattttatgcgtttcagtcgaaaaatcaaaataaatcgacgcttattcggaatgctacgaaactttacagatcctctaaatgt-attttttatagaggt 40440090  T
Q  491 gtctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatc 590  Q
    ||||| |||||  ||| ||||||||||||||||| |||||        | ||||||||| ||||||| | ||||||||||||||||||||||||||||||    
T  40440091 gtctgaaaaaa--cagctcaaaattcaatttctaggtcga--------tattttggtttattgagtttttggcgcattaaaaattcatatttaatccatc 40440180  T
Q  591 cgttctcgaaaaattctaattttttgcgggaaatg 625  Q
    | || ||| |||||| |||||||||| ||||||||    
T  40440181 cattgtcggaaaattttaattttttgtgggaaatg 40440215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 354 - 460
Target Start/End: Complemental strand, 44656519 - 44656413
Alignment:
Q  354 ggcagttaactgctgctggctttgatgttttttattatgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaa 453  Q
    ||||||||||||| |||||||||| || ||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||  ||||||||||||    
T  44656519 ggcagttaactgccgctggctttgctgctttttattatgattttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcataattctacgaaa 44656420  T
Q  454 ctttaca 460  Q
    |||||||    
T  44656419 ctttaca 44656413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 745 - 872
Target Start/End: Original strand, 44702856 - 44702983
Alignment:
Q  745 tcaaaataaattgaggattactcgaaatactaagaaaatttgcagatcctctatatgtatttttatagaggtgtctgcnnnnnnncagctcaaaattcaa 844  Q
    |||||||||||| ||||||| || |||||||| ||||||||||| |||||||||||||||| ||||||||||||||||       || ||||||||||||    
T  44702856 tcaaaataaattaaggattagtcaaaatactacgaaaatttgcatatcctctatatgtattattatagaggtgtctgcaaaaaagcatctcaaaattcaa 44702955  T
Q  845 tttttaggttgatattttgatgttttcg 872  Q
    ||||||||||||| ||||||||||||||    
T  44702956 tttttaggttgatgttttgatgttttcg 44702983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 231 - 471
Target Start/End: Complemental strand, 15630511 - 15630292
Alignment:
Q  231 agaaaattgctttttt-atatagaaaacttcctattgacacaaataaatgaccaaatta-ctccagcggtagttaactgtctctggcatatgcgtcggca 328  Q
    ||||| |||||||||| | || ||| ||||||||||||||||||||||||||||||||| | || |||||||||||||  |||||||||||||| |||||    
T  15630511 agaaagttgcttttttgacattgaatacttcctattgacacaaataaatgaccaaattatccccggcggtagttaactacctctggcatatgcgccggca 15630412  T
Q  329 gttaattgccgctggctccttcagaggcagttaactgctgctggctttgatgttttttattatgattttacgcgtttcggtcaaaaaatcaaaataaatc 428  Q
    |         |||||||||| |||||               || ||||| |||||||||||||||||||||||||||| ||  |||||||||||||||||    
T  15630411 g---------gctggctcctccagag---------------tgactttgctgttttttattatgattttacgcgtttcagttgaaaaatcaaaataaatc 15630336  T
Q  429 gaaacttattcggaattctacgaaactttacagac-cctctata 471  Q
    |||| |||||| ||||||||||||||||||||||| ||||||||    
T  15630335 gaaagttattcagaattctacgaaactttacagacacctctata 15630292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 356 - 463
Target Start/End: Original strand, 3259969 - 3260076
Alignment:
Q  356 cagttaactgctgctggctttgatgttttttattatgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaact 455  Q
    ||||||||||| |||||||||| || ||||||||||||||||||||||||| ||   |||||||||||||||||||| |||||| |||||||||||||||    
T  3259969 cagttaactgccgctggctttgttgctttttattatgattttacgcgtttcagtaggaaaatcaaaataaatcgaaagttattcagaattctacgaaact 3260068  T
Q  456 ttacagac 463  Q
    || |||||    
T  3260069 tttcagac 3260076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 361 - 457
Target Start/End: Complemental strand, 6173038 - 6172942
Alignment:
Q  361 aactgctgctggctttgatgttttttattatgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaacttt 457  Q
    |||||| |||||||||| |  ||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||| |||||||||||||||||    
T  6173038 aactgccgctggctttgcttctttttattatgattttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacgaaacttt 6172942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 358 - 449
Target Start/End: Complemental strand, 3260182 - 3260091
Alignment:
Q  358 gttaactgctgctggctttgatgttttttattatgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctac 449  Q
    ||||||| | |||||||||| || |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||    
T  3260182 gttaactaccgctggctttgctgctttttattatgattttacacgtttcggtcgaaaaatcaaaataaatcgaaacttattcagaattctac 3260091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 373 - 472
Target Start/End: Original strand, 36583450 - 36583549
Alignment:
Q  373 ctttgatgttttttattatgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagaccctctatat 472  Q
    ||||| || |||||||| ||||||||||||||||| || |||||| ||||||||||||||||||||  |||||||||||||||||||||||| |||||||    
T  36583450 ctttgctgctttttattgtgattttacgcgtttcgatcgaaaaataaaaataaatcgaaacttatttagaattctacgaaactttacagaccttctatat 36583549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 230 - 342
Target Start/End: Original strand, 44655333 - 44655447
Alignment:
Q  230 aagaaaattgctttttt-atatagaaaacttcctattgacacaaataaatgaccaaattact-ccagcggtagttaactgtctctggcatatgcgtcggc 327  Q
    |||||||||| |||||| |||||||| |||||||||||| | |||||||||| ||||||||| ||||||||||||||||| |||||||||||||| || |    
T  44655333 aagaaaattgtttttttgatatagaatacttcctattgatataaataaatgatcaaattacttccagcggtagttaactgcctctggcatatgcgccgac 44655432  T
Q  328 agttaattgccgctg 342  Q
    |||||| ||||||||    
T  44655433 agttaactgccgctg 44655447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 233 - 345
Target Start/End: Complemental strand, 44656613 - 44656499
Alignment:
Q  233 aaaattgctttttt-atatagaaaacttcctattgacacaaataaatgaccaaatta-ctccagcggtagttaactgtctctggcatatgcgtcggcagt 330  Q
    |||||| ||||||| | |||||| ||||| |||||||||||||||||||| |||||| | ||||||||||||||||| |||||||||||||  |||||||    
T  44656613 aaaattacttttttgacatagaatacttcatattgacacaaataaatgactaaattatccccagcggtagttaactgcctctggcatatgcaccggcagt 44656514  T
Q  331 taattgccgctggct 345  Q
    ||| |||||||||||    
T  44656513 taactgccgctggct 44656499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 249 - 345
Target Start/End: Original strand, 3259890 - 3259987
Alignment:
Q  249 atagaaaacttcctattgacacaaataaatgaccaaattactcc-agcggtagttaactgtctctggcatatgcgtcggcagttaattgccgctggct 345  Q
    |||||| |||| |||||||||||| |||||||||||||||| || ||||||||||||||| |||||||||||||| || ||||||| |||||||||||    
T  3259890 atagaatactttctattgacacaagtaaatgaccaaattacccccagcggtagttaactgcctctggcatatgcgccgacagttaactgccgctggct 3259987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 232 - 345
Target Start/End: Original strand, 31382 - 31497
Alignment:
Q  232 gaaaattgctttttt--atatagaaaacttcctattgacacaaataaatgaccaaattactcc-agcggtagttaactgtctctggcatatgcgtcggca 328  Q
    |||||||||||||||  | |||||| ||||| ||||||||||| |||||||||||||||| || ||||||||||||||| ||||| | |||||| |||||    
T  31382 gaaaattgctttttttgacatagaacacttc-tattgacacaagtaaatgaccaaattacccccagcggtagttaactgcctctgacgtatgcgccggca 31480  T
Q  329 gttaattgccgctggct 345  Q
    ||||| |||||||||||    
T  31481 gttaactgccgctggct 31497  T

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Target: chr2; HSP #26
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 497 - 615
Target Start/End: Original strand, 44655897 - 44656015
Alignment:
Q  497 aaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatccgttct 596  Q
    |||||| ||| |||||||||||||| || || || ||||||||||||| || |||| | || | ||||| ||||||||||||||||||||| ||| || |    
T  44655897 aaaaaaacagctcaaaattcaatttttaggttgatgttttgatgttttcgtgtcttaaattttaggcgcgttaaaaattcatatttaatccgtcccttgt 44655996  T
Q  597 cgaaaaattctaatttttt 615  Q
    |||||||||| ||||||||    
T  44655997 cgaaaaattcaaatttttt 44656015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 485 - 625
Target Start/End: Original strand, 15629816 - 15629956
Alignment:
Q  485 agagatgtctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaa 584  Q
    |||| ||||||||||||| ||| |||||||||||||| || || || ||||||||||||| || |||| | || | ||||| |||| |||||||||||||    
T  15629816 agaggtgtctgcaaaaaaacagctcaaaattcaatttttaggttgatgttttgatgttttcgtgtcttaaattttaggcgcgttaagaattcatatttaa 15629915  T
Q  585 tccatccgttctcgaaaaattctaattttttgcgggaaatg 625  Q
    ||  ||| || || |||||||| ||||||||| || |||||    
T  15629916 tctgtcccttgtcaaaaaattcaaattttttgtggaaaatg 15629956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 527 - 615
Target Start/End: Original strand, 44702613 - 44702703
Alignment:
Q  527 tcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatc--catccgttctcgaaaaattctaatttttt 615  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||||||  ||||||   ||||||| | |||||||| |||||||||    
T  44702613 tcgacgttttgatgttttggtttcttgagttattggtgcattaaaaattcatgcttaatctatatccgttgttgaaaaattttaatttttt 44702703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 508 - 621
Target Start/End: Original strand, 36583879 - 36583992
Alignment:
Q  508 tcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatccgttctcgaaaaattct 607  Q
    |||||||||||||| || || || |||||||||||||  | |||| | || | ||||| ||||||||||||||||||| ||||| || |||||||||||     
T  36583879 tcaaaattcaatttttaggttgatgttttgatgttttcttgtcttaaattttaggcgcgttaaaaattcatatttaattcatcccttgtcgaaaaattca 36583978  T
Q  608 aattttttgcggga 621  Q
    ||||||||| ||||    
T  36583979 aattttttgtggga 36583992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 404 - 472
Target Start/End: Original strand, 6172851 - 6172920
Alignment:
Q  404 ttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagac-cctctatat 472  Q
    ||||||||||||||||||||||||||| ||||| ||| ||| ||||||||||||| |||| |||||||||    
T  6172851 ttcggtcaaaaaatcaaaataaatcgagacttagtcgaaatactacgaaactttatagacacctctatat 6172920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 232 - 322
Target Start/End: Complemental strand, 6173133 - 6173041
Alignment:
Q  232 gaaaattgctttttt-atatagaaaacttcctattgacacaaataaatgaccaaattactcc-agcggtagttaactgtctctggcatatgcg 322  Q
    ||||||||||||||| |||| ||| ||||||||||| || || |||||||| ||||||| || || |||||||||||| ||||||||||||||    
T  6173133 gaaaattgcttttttgatattgaatacttcctattggcataagtaaatgactaaattacccccagtggtagttaactgcctctggcatatgcg 6173041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 672 - 732
Target Start/End: Original strand, 10601435 - 10601495
Alignment:
Q  672 tcaacctctatataacttttccgggcacgtagttagaaaaatattgcaattttacgcgttt 732  Q
    |||||||||||||||||||| ||| | || |||||||||||||||||||||||||| ||||    
T  10601435 tcaacctctatataactttttcggacgcgcagttagaaaaatattgcaattttacgtgttt 10601495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 567 - 621
Target Start/End: Original strand, 10601594 - 10601648
Alignment:
Q  567 ttaaaaattcatatttaatccatccgttctcgaaaaattctaattttttgcggga 621  Q
    ||||||||||||||||||||||||| || ||||||||||| ||||||||| ||||    
T  10601594 ttaaaaattcatatttaatccatcccttgtcgaaaaattcaaattttttgtggga 10601648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 232 - 296
Target Start/End: Complemental strand, 10602275 - 10602210
Alignment:
Q  232 gaaaattgctttttt-atatagaaaacttcctattgacacaaataaatgaccaaattactccagcg 296  Q
    ||||||||||||||| | || ||| ||||||||||||||||| |||||||||||||||| ||||||    
T  10602275 gaaaattgcttttttgacattgaatacttcctattgacacaagtaaatgaccaaattaccccagcg 10602210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 404 - 472
Target Start/End: Original strand, 44329331 - 44329400
Alignment:
Q  404 ttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagac-cctctatat 472  Q
    ||||||| ||||||||||||||||||| ||||| ||| ||| ||||||||||||| |||| |||||||||    
T  44329331 ttcggtcgaaaaatcaaaataaatcgagacttagtcgaaatgctacgaaactttatagacacctctatat 44329400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 485 - 586
Target Start/End: Original strand, 44702922 - 44703023
Alignment:
Q  485 agagatgtctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaa 584  Q
    |||| ||||||||||||| ||  |||||||||||||| || || || ||||||||||||| |  |||| | || | ||||| ||||||||||||||||||    
T  44702922 agaggtgtctgcaaaaaagcatctcaaaattcaatttttaggttgatgttttgatgttttcgaatcttaaattttaggcgcgttaaaaattcatatttaa 44703021  T
Q  585 tc 586  Q
    ||    
T  44703022 tc 44703023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 235 - 321
Target Start/End: Complemental strand, 3260278 - 3260190
Alignment:
Q  235 aattgcttttttat-atagaaaacttcctattgacacaaataaatgaccaaattac-tccagcggtagttaactgtctctggcatatgc 321  Q
    |||||||||||||  |||||| |||| ||||||| |||| |||||||||||||||| | || | ||||||||| |||||||||||||||    
T  3260278 aattgcttttttaacatagaatactttctattgatacaagtaaatgaccaaattactttcaacagtagttaacagtctctggcatatgc 3260190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 419 - 463
Target Start/End: Complemental strand, 34414976 - 34414932
Alignment:
Q  419 aaaataaatcgaaacttattcggaattctacgaaactttacagac 463  Q
    |||||||||||||| |||||| |||||||||||||||||||||||    
T  34414976 aaaataaatcgaaagttattcagaattctacgaaactttacagac 34414932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 230 - 307
Target Start/End: Original strand, 6172105 - 6172184
Alignment:
Q  230 aagaaaattgctttttt-atatagaaaacttcctattgacacaaataaatgaccaaatta-ctccagcggtagttaactg 307  Q
    |||| |||||||||||| |||| ||| |||||||||||||| || ||||||| ||| ||| |||||||||||||||||||    
T  6172105 aagagaattgcttttttgatattgaatacttcctattgacataagtaaatgatcaagttacctccagcggtagttaactg 6172184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 421 - 463
Target Start/End: Complemental strand, 10602182 - 10602140
Alignment:
Q  421 aataaatcgaaacttattcggaattctacgaaactttacagac 463  Q
    |||||||||||| |||||| |||||||||||||||||||||||    
T  10602182 aataaatcgaaagttattcagaattctacgaaactttacagac 10602140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 392 - 457
Target Start/End: Original strand, 34414834 - 34414900
Alignment:
Q  392 gattttacgcgtttcggtc-aaaaaatcaaaataaatcgaaacttattcggaattctacgaaacttt 457  Q
    |||||| |||||||||||| ||||||| |||| ||||||| |||||||||||||  |||||||||||    
T  34414834 gattttgcgcgtttcggtcgaaaaaataaaaaaaaatcgagacttattcggaatgttacgaaacttt 34414900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 745 - 863
Target Start/End: Original strand, 40440018 - 40440135
Alignment:
Q  745 tcaaaataaattgaggattactcgaaatactaagaaaatttgcagatcctctatatgta-tttttatagaggtgtctgcnnnnnnncagctcaaaattca 843  Q
    ||||||||||| || | ||| ||| ||| ||| |||| ||| ||||||||||| ||||| ||||||||||||||||||        ||||||||||||||    
T  40440018 tcaaaataaatcgacgcttattcggaatgctacgaaactttacagatcctctaaatgtattttttatagaggtgtctg--aaaaaacagctcaaaattca 40440115  T
Q  844 atttttaggttgatattttg 863  Q
    |||| ||||| |||||||||    
T  40440116 atttctaggtcgatattttg 40440135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 535 - 621
Target Start/End: Original strand, 44329136 - 44329222
Alignment:
Q  535 ttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatccgttctcgaaaaattctaattttttgcggga 621  Q
    |||||||||| || |||| | || | ||||| ||||||||||||||||||||| ||| || |||||||| || ||||||||| ||||    
T  44329136 ttgatgttttcgtgtcttaaattttaggcgcgttaaaaattcatatttaatccgtcccttgtcgaaaaactcaaattttttgtggga 44329222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 404 - 472
Target Start/End: Original strand, 10601757 - 10601826
Alignment:
Q  404 ttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagac-cctctatat 472  Q
    ||||||| ||||||||||||||||||| ||||| ||| |||  |||||||||||| |||| |||||||||    
T  10601757 ttcggtcgaaaaatcaaaataaatcgagacttagtcgaaatgttacgaaactttatagacacctctatat 10601826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 387 - 444
Target Start/End: Complemental strand, 24774297 - 24774240
Alignment:
Q  387 attatgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaat 444  Q
    ||||||||||| |||||||||||| | |||||||||||||||||  | ||||||||||    
T  24774297 attatgattttgcgcgtttcggtcgataaatcaaaataaatcgaggcatattcggaat 24774240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 754 - 785
Target Start/End: Original strand, 10601496 - 10601527
Alignment:
Q  754 attgaggattactcgaaatactaagaaaattt 785  Q
    ||||||||||||||||||||||||||||||||    
T  10601496 attgaggattactcgaaatactaagaaaattt 10601527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 485 - 621
Target Start/End: Complemental strand, 31298349 - 31298221
Alignment:
Q  485 agagatgtctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaa 584  Q
    |||| ||||||||||||| ||| |||||||||||||| || ||        ||||||||| || |||| | || | |||||||||||| |||||||||||    
T  31298349 agaggtgtctgcaaaaaaacagctcaaaattcaatttttaggt--------tgatgttttcgtgtcttaaattttaggcgcattaaaatttcatatttaa 31298258  T
Q  585 tccatccgttctcgaaaaattctaattttttgcggga 621  Q
    ||| |||  | || |||||||| ||||||||| ||||    
T  31298257 tccgtcccatgtcaaaaaattcaaattttttgtggga 31298221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 535 - 621
Target Start/End: Original strand, 6172658 - 6172744
Alignment:
Q  535 ttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatccgttctcgaaaaattctaattttttgcggga 621  Q
    |||||||||| || |||| | || | ||||| ||||||| ||||||||||||| ||| || ||||||||||| | ||||||| ||||    
T  6172658 ttgatgttttcgtgtcttaaattttaggcgcgttaaaaaatcatatttaatccgtcccttgtcgaaaaattcaatttttttgtggga 6172744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 232 - 281
Target Start/End: Original strand, 6975962 - 6976012
Alignment:
Q  232 gaaaattgctttttt-atatagaaaacttcctattgacacaaataaatgac 281  Q
    ||||||||||||| | |||||||| ||||||||||||||||| ||||||||    
T  6975962 gaaaattgcttttctgatatagaatacttcctattgacacaagtaaatgac 6976012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 392 - 457
Target Start/End: Complemental strand, 31297970 - 31297904
Alignment:
Q  392 gattttacgcgtttcggtc-aaaaaatcaaaataaatcgaaacttattcggaattctacgaaacttt 457  Q
    |||||| |||||||||||| ||||||| || | ||||||| |||||||||||||  |||||||||||    
T  31297970 gattttgcgcgtttcggtcgaaaaaataaacaaaaatcgagacttattcggaatgttacgaaacttt 31297904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 404 - 458
Target Start/End: Original strand, 44656130 - 44656184
Alignment:
Q  404 ttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaacttta 458  Q
    ||||||| |||||||| |||||||||| ||||| ||| ||| |||||||||||||    
T  44656130 ttcggtcgaaaaatcataataaatcgagacttagtcgaaatgctacgaaacttta 44656184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 411 - 456
Target Start/End: Complemental strand, 29425553 - 29425508
Alignment:
Q  411 aaaaaatcaaaataaatcgaaacttattcggaattctacgaaactt 456  Q
    |||||||||||||||||||| || || ||||||||||| |||||||    
T  29425553 aaaaaatcaaaataaatcgagacgtagtcggaattctatgaaactt 29425508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 404 - 472
Target Start/End: Complemental strand, 31298114 - 31298045
Alignment:
Q  404 ttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagac-cctctatat 472  Q
    ||||||| ||| ||||||||||||||| ||||| ||  ||| ||||||||||||| |||| |||||||||    
T  31298114 ttcggtcgaaatatcaaaataaatcgagacttagtcaaaatgctacgaaactttagagacacctctatat 31298045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 135; Significance: 8e-70; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 135; E-Value: 8e-70
Query Start/End: Original strand, 356 - 625
Target Start/End: Complemental strand, 31602890 - 31602620
Alignment:
Q  356 cagttaactgctgctggctttgatgttttttattatgattttacgcgtttcggtcaaaaaatcaaaa-taaatcgaaacttattcggaattctacgaaac 454  Q
    ||||||||||| ||| |||||| || |||||||| |||||||||||||||| ||| ||||| ||||| ||||||||||||||||| ||||||||| ||||    
T  31602890 cagttaactgccgctagctttgctgctttttattgtgattttacgcgtttcagtcgaaaaaacaaaaataaatcgaaacttattcagaattctacaaaac 31602791  T
Q  455 tttacagaccctctatattttannnnnnnnagagatgtctgcaaaaaa--ccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttctt 552  Q
    |||||||||||||||||| |          |||| | |||||||||||  ||| |||||||||||||||||| |||||||| ||||||||||||||||||    
T  31602790 tttacagaccctctatatat--gtttttttagagttttctgcaaaaaaaaccatatcaaaattcaatttctaggtcgacgtattgatgttttggtttctt 31602693  T
Q  553 gagttatcggcgcattaaaaattcatatttaatccatccgttctcgaaaaattctaattttttgcgggaaatg 625  Q
    || |||| | |||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  31602692 gaattattgacgcattaaaaattcatatttaatccatccgttgtcgaaaaattctaattttttgcaggaaatg 31602620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 132; E-Value: 5e-68
Query Start/End: Original strand, 354 - 625
Target Start/End: Original strand, 14815451 - 14815712
Alignment:
Q  354 ggcagttaactgctgctggctttgatgttttttattatgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaa 453  Q
    ||||||||||||| ||| |||||| || |||||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||||||||| |||    
T  14815451 ggcagttaactgccgctagctttgctgctttttattatgattttacgcgtttcggtcaaaaaatcaaaataaattgaaacttactcagaattctacaaaa 14815550  T
Q  454 ctttacagaccctctatattttannnnnnnnagagatgtctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttg 553  Q
     |||||||||||||||||| |          |||| ||||| ||||||||||||||||||||||||||||| |||         ||||||||||||||||    
T  14815551 ttttacagaccctctatatat--atttttttagagctgtctacaaaaaaccagatcaaaattcaatttctaggtc--------aatgttttggtttcttg 14815640  T
Q  554 agttatcggcgcattaaaaattcatatttaatccatccgttctcgaaaaattctaattttttgcgggaaatg 625  Q
    |||||| || |||||||||||||||||||||||||||| || | ||||||||||||||||||||||||||||    
T  14815641 agttattggtgcattaaaaattcatatttaatccatccattgttgaaaaattctaattttttgcgggaaatg 14815712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 132; E-Value: 5e-68
Query Start/End: Original strand, 354 - 625
Target Start/End: Original strand, 15262446 - 15262707
Alignment:
Q  354 ggcagttaactgctgctggctttgatgttttttattatgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaa 453  Q
    ||||||||||||| ||| |||||| || |||||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||||||||| |||    
T  15262446 ggcagttaactgccgctagctttgctgctttttattatgattttacgcgtttcggtcaaaaaatcaaaataaattgaaacttactcagaattctacaaaa 15262545  T
Q  454 ctttacagaccctctatattttannnnnnnnagagatgtctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttg 553  Q
     |||||||||||||||||| |          |||| ||||| ||||||||||||||||||||||||||||| |||         ||||||||||||||||    
T  15262546 ttttacagaccctctatatat--atttttttagagctgtctacaaaaaaccagatcaaaattcaatttctaggtc--------aatgttttggtttcttg 15262635  T
Q  554 agttatcggcgcattaaaaattcatatttaatccatccgttctcgaaaaattctaattttttgcgggaaatg 625  Q
    |||||| || |||||||||||||||||||||||||||| || | ||||||||||||||||||||||||||||    
T  15262636 agttattggtgcattaaaaattcatatttaatccatccattgttgaaaaattctaattttttgcgggaaatg 15262707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 97; E-Value: 4e-47
Query Start/End: Original strand, 673 - 862
Target Start/End: Original strand, 48556144 - 48556332
Alignment:
Q  673 caacctctatataacttttccgggcacgtagttagaaaaatattgcaattttacgcgttttagtnnnnnnnntcaaaataaattgaggattactcgaaat 772  Q
    ||||||||||||||||||||||| | || |||||||||||||||| |||||||||||||| |||        | ||||||||||||||||||||||||||    
T  48556144 caacctctatataacttttccggactcgcagttagaaaaatattgtaattttacgcgtttcagtaaaaaaatt-aaaataaattgaggattactcgaaat 48556242  T
Q  773 actaagaaaatttgcagatcctctatatgtatttttatagaggtgtctgcnnnnnnncagctcaaaattcaatttttaggttgatatttt 862  Q
    ||||||||||||| ||||||||||||||||||||| |||||| |||||||       |||||||||| ||||||||||||||||| ||||    
T  48556243 actaagaaaattttcagatcctctatatgtattttaatagagatgtctgcaaaaaaacagctcaaaagtcaatttttaggttgatgtttt 48556332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 672 - 875
Target Start/End: Complemental strand, 47610832 - 47610630
Alignment:
Q  672 tcaacctctatataacttttccgggcacgtagttagaaaaatattgcaattttacgcgttttagtnnnnnnnntcaaaataaattgaggattactcgaaa 771  Q
    |||||||||||||||||||||||| | || |||| |||||||||||||||||||||||||| |||        |||||||||||||||||||| |||||     
T  47610832 tcaacctctatataacttttccggacgcgcagttggaaaaatattgcaattttacgcgtttcagtaaaaaaaatcaaaataaattgaggattagtcgaa- 47610734  T
Q  772 tactaagaaaatttgcagatcctctatatgtatttttatagaggtgtctgcnnnnnnncagctcaaaattcaatttttaggttgatattttgatgttttc 871  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||| |||        || |||||||||||||||||||||||| |||||| |||| |    
T  47610733 tactacgaaaattttcagatcctctatatgtatttttatagaggtgtttgcaaaaaaaaagttcaaaattcaatttttaggttgatgttttgaagtttcc 47610634  T
Q  872 gtgt 875  Q
    ||||    
T  47610633 gtgt 47610630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 672 - 875
Target Start/End: Complemental strand, 31602573 - 31602370
Alignment:
Q  672 tcaacctctatataacttttccgggcacgtagttagaaaaatattgcaattttacgcgttttagtnnnnnnnntcaaaataaattgaggattactcgaaa 771  Q
    ||||||||||||||||||||| ||   || ||||  ||||||||||||||||||||||||| |||        |||||||||||||||||| ||||||||    
T  31602573 tcaacctctatataacttttctggatgcgcagttgaaaaaatattgcaattttacgcgtttcagtaaaaaat-tcaaaataaattgaggataactcgaaa 31602475  T
Q  772 tactaagaaaatttgcagatcctctatatgtatttttatagaggtgtctgc-nnnnnnncagctcaaaattcaatttttaggttgatattttgatgtttt 870  Q
    ||||||||||||||| ||||||| |||||||||||||||| ||||||||||        |||||||||||||||||||||||||||| |||||||||||     
T  31602474 tactaagaaaatttgaagatcctttatatgtatttttatacaggtgtctgcaaaaaaaacagctcaaaattcaatttttaggttgatgttttgatgtttc 31602375  T
Q  871 cgtgt 875  Q
    |||||    
T  31602374 cgtgt 31602370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 672 - 862
Target Start/End: Complemental strand, 25694887 - 25694698
Alignment:
Q  672 tcaacctctatataacttttccgggcacgtagttagaaaaatattgcaattttacgcgttttagtnnnnnnnntcaaaataaattgaggattactcgaaa 771  Q
    |||||||||||||||||||| ||| |    | || ||||||||||| |||||||||||||| |||        |||||||||||||||||||||||||||    
T  25694887 tcaacctctatataactttttcggacgtacaattggaaaaatattgaaattttacgcgtttcagtaaaaaat-tcaaaataaattgaggattactcgaaa 25694789  T
Q  772 tactaagaaaatttgcagatcctctatatgtatttttatagaggtgtctgcnnnnnnncagctcaaaattcaatttttaggttgatatttt 862  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||        | ||||||||||||||||||||||||| ||||    
T  25694788 tactaagaaaatttgtagatcctctatatgtatttttatagaggtgtctgcaaaaaaatacctcaaaattcaatttttaggttgatgtttt 25694698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 391 - 624
Target Start/End: Complemental strand, 47611096 - 47610880
Alignment:
Q  391 tgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagaccctctatattttannnnnnnnagagat 490  Q
    |||||||||||||||||||| ||||||||||||||       ||||||| |||||||||||||||||||| |||||| |||| |          |||| |    
T  47611096 tgattttacgcgtttcggtcgaaaaatcaaaataa-------cttattcagaattctacgaaactttacataccctcaatatat--atatttttagagct 47611006  T
Q  491 gtctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatc 590  Q
    ||||||| |||||||| |||||||||||||| || || |||||||||        |||||||||||||| |||||||| |||||||||||||||||||||    
T  47611005 gtctgcacaaaaccagctcaaaattcaatttttaggttgacgttttg--------gtttcttgagttattggcgcatttaaaattcatatttaatccatc 47610914  T
Q  591 cgttctcgaaaaattctaattttttgcgggaaat 624  Q
    |||| ||||||||||||||||||||| |||||||    
T  47610913 cgttgtcgaaaaattctaattttttgtgggaaat 47610880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 508 - 622
Target Start/End: Complemental strand, 25695052 - 25694938
Alignment:
Q  508 tcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatccgttctcgaaaaattct 607  Q
    ||||||||||||||||| ||||||||| ||||||||| |||||||||||| | ||||||||||||||||||||||||||||||  || ||||||||||||    
T  25695052 tcaaaattcaatttctaggtcgacgttctgatgttttagtttcttgagtttttggcgcattaaaaattcatatttaatccatctattgtcgaaaaattct 25694953  T
Q  608 aattttttgcgggaa 622  Q
    ||||||||| |||||    
T  25694952 aattttttgtgggaa 25694938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 230 - 463
Target Start/End: Original strand, 25694056 - 25694272
Alignment:
Q  230 aagaaaattgctttttt-atatagaaaacttcctattgacacaaataaatgaccaaatta-ctccagcggtagttaactgtctctggcatatgcgtcggc 327  Q
    |||||||||| |||||| | || ||| |||| ||||||||| || ||||||| ||||||| || | | ||||||||||||||| ||||||||||||||||    
T  25694056 aagaaaattgtttttttgacattgaatacttgctattgacataagtaaatgatcaaattatcttcggtggtagttaactgtctttggcatatgcgtcggc 25694155  T
Q  328 agttaattgccgctggctccttcagaggcagttaactgctgctggctttgatgttttttattatgattttacgcgtttcggtcaaaaaatcaaaataaat 427  Q
    |||||| |||||||||||||| || ||||||||                   | |||||||||||||||||||||||| |||| ||||||||||||||||    
T  25694156 agttaactgccgctggctcctccaaaggcagtt-------------------gctttttattatgattttacgcgttttggtcgaaaaatcaaaataaat 25694236  T
Q  428 cgaaacttattcggaattctacgaaactttacagac 463  Q
    ||||| |||||| ||||||||||||| |||||||||    
T  25694237 cgaaagttattcagaattctacgaaattttacagac 25694272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 391 - 468
Target Start/End: Original strand, 22929022 - 22929099
Alignment:
Q  391 tgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagaccctct 468  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||    
T  22929022 tgattttacacgttttggtcaaaaaatcaaaataaatcgaaacttattcagaattttacgaaactttacataccctct 22929099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 354 - 471
Target Start/End: Complemental strand, 48556869 - 48556751
Alignment:
Q  354 ggcagttaactgctgctggctttgatgttttttattatgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaa 453  Q
    |||||||||||||  ||| ||||| || |||||||||| |||| ||| ||||||||  ||||||||||||||||||||| |||||| || || |||||||    
T  48556869 ggcagttaactgccactgactttgctgctttttattataatttaacgtgtttcggtagaaaaatcaaaataaatcgaaagttattcagatttttacgaaa 48556770  T
Q  454 ctttacagac-cctctata 471  Q
    |||||||||| ||||||||    
T  48556769 ctttacagacacctctata 48556751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 235 - 341
Target Start/End: Complemental strand, 31602984 - 31602876
Alignment:
Q  235 aattgctttttt-atatagaaaacttcctattgacacaaataaatgaccaaattactcc-agcggtagttaactgtctctggcatatgcgtcggcagtta 332  Q
    |||||||||||| |||| ||| | || |||||||||||| ||||||| |||||||| || ||||||||||||||| |||||||||||||| || ||||||    
T  31602984 aattgcttttttgatattgaatattttctattgacacaagtaaatgatcaaattacccccagcggtagttaactgcctctggcatatgcgccgacagtta 31602885  T
Q  333 attgccgct 341  Q
    | |||||||    
T  31602884 actgccgct 31602876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 372 - 439
Target Start/End: Complemental strand, 25695118 - 25695051
Alignment:
Q  372 gctttgatgttttttattatgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattc 439  Q
    |||||| || |||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  25695118 gctttgctgctttttattgtgattttacgcgtttcggtcgaaaaatcaaaataaatcaaaacttattc 25695051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 267 - 341
Target Start/End: Original strand, 14815392 - 14815467
Alignment:
Q  267 acacaaataaatgaccaaatta-ctccagcggtagttaactgtctctggcatatgcgtcggcagttaattgccgct 341  Q
    |||||| ||||||||||||||| | ||||||||||||||||| ||||| |||||||| |||||||||| |||||||    
T  14815392 acacaagtaaatgaccaaattatccccagcggtagttaactgcctctgacatatgcgccggcagttaactgccgct 14815467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 267 - 341
Target Start/End: Original strand, 15262387 - 15262462
Alignment:
Q  267 acacaaataaatgaccaaatta-ctccagcggtagttaactgtctctggcatatgcgtcggcagttaattgccgct 341  Q
    |||||| ||||||||||||||| | ||||||||||||||||| ||||| |||||||| |||||||||| |||||||    
T  15262387 acacaagtaaatgaccaaattatccccagcggtagttaactgcctctgacatatgcgccggcagttaactgccgct 15262462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 485 - 621
Target Start/End: Complemental strand, 47610694 - 47610558
Alignment:
Q  485 agagatgtctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaa 584  Q
    |||| ||| |||||||||  || |||||||||||||| || || || ||||||| ||||  || |||| | || | ||||| ||||||||||||||||||    
T  47610694 agaggtgtttgcaaaaaaaaagttcaaaattcaatttttaggttgatgttttgaagtttccgtgtcttaaattttaggcgcgttaaaaattcatatttaa 47610595  T
Q  585 tccatccgttctcgaaaaattctaattttttgcggga 621  Q
    |   ||| || ||||||||||| ||||||||||||||    
T  47610594 tttgtcccttgtcgaaaaattcaaattttttgcggga 47610558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 411 - 463
Target Start/End: Complemental strand, 6038112 - 6038060
Alignment:
Q  411 aaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagac 463  Q
    |||||||||||||||||||| ||||| ||| ||| ||||||||||||||||||    
T  6038112 aaaaaatcaaaataaatcgagacttaatcgaaatgctacgaaactttacagac 6038060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 497 - 621
Target Start/End: Complemental strand, 31602422 - 31602298
Alignment:
Q  497 aaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatccgttct 596  Q
    |||||| ||| |||||||||||||| || || || ||||||||||||  || |||| | || | | ||| ||||||||||||||||||||| | | || |    
T  31602422 aaaaaaacagctcaaaattcaatttttaggttgatgttttgatgtttccgtgtctttaattttagacgcgttaaaaattcatatttaatccgttccttgt 31602323  T
Q  597 cgaaaaattctaattttttgcggga 621  Q
    | |||||||| ||||||||| ||||    
T  31602322 caaaaaattcaaattttttgtggga 31602298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 395 - 461
Target Start/End: Complemental strand, 25609617 - 25609550
Alignment:
Q  395 tttacgcgtttcggtcaaaaaa-tcaaaataaatcgaaacttattcggaattctacgaaactttacag 461  Q
    |||||||||||  ||||||||| ||||||||||||||  |||||| ||||| ||||||||||||||||    
T  25609617 tttacgcgtttttgtcaaaaaaatcaaaataaatcgaggcttatttggaatgctacgaaactttacag 25609550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 785 - 820
Target Start/End: Complemental strand, 35248838 - 35248803
Alignment:
Q  785 tgcagatcctctatatgtatttttatagaggtgtct 820  Q
    ||||||||||||||||||||||||||||||||||||    
T  35248838 tgcagatcctctatatgtatttttatagaggtgtct 35248803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 485 - 621
Target Start/End: Original strand, 48556281 - 48556409
Alignment:
Q  485 agagatgtctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaa 584  Q
    |||||||||||||||||| ||| |||||| ||||||| || ||        ||||||||| || |||| | || | ||||| ||||||||||||||||||    
T  48556281 agagatgtctgcaaaaaaacagctcaaaagtcaatttttaggt--------tgatgttttcgtgtcttaaattttaggcgcgttaaaaattcatatttaa 48556372  T
Q  585 tccatccgttctcgaaaaattctaattttttgcggga 621  Q
    ||  ||| || ||||||||||| ||||||||| ||||    
T  48556373 tctgtcccttgtcgaaaaattcaaattttttgtggga 48556409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 392 - 457
Target Start/End: Complemental strand, 25694369 - 25694304
Alignment:
Q  392 gattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaacttt 457  Q
    |||||| |||||||||||| |||||  |||| ||||||| |||||||||||||  |||||||||||    
T  25694369 gattttgcgcgtttcggtcgaaaaaataaaaaaaatcgagacttattcggaatcttacgaaacttt 25694304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 391 - 471
Target Start/End: Complemental strand, 31602204 - 31602123
Alignment:
Q  391 tgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagac-cctctata 471  Q
    ||||||| | || ||||||| |||||| |||||||||||| ||||| ||| ||| ||||||||||||| |||| ||||||||    
T  31602204 tgattttgcacggttcggtcgaaaaataaaaataaatcgagacttagtcgaaatgctacgaaactttatagacacctctata 31602123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 404 - 472
Target Start/End: Original strand, 48556517 - 48556586
Alignment:
Q  404 ttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagac-cctctatat 472  Q
    ||||||| |||||||||||||||| || ||||| ||| ||| ||||||||||||| |||| |||||||||    
T  48556517 ttcggtcgaaaaatcaaaataaattgagacttagtcgaaatgctacgaaactttaaagacacctctatat 48556586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 393 - 449
Target Start/End: Complemental strand, 35248902 - 35248846
Alignment:
Q  393 attttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctac 449  Q
    |||||| |||| |||||| |||||||||||||||||||  |||||||||||| ||||    
T  35248902 attttaagcgtctcggtcgaaaaatcaaaataaatcgagccttattcggaatgctac 35248846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 412 - 463
Target Start/End: Complemental strand, 23939127 - 23939076
Alignment:
Q  412 aaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagac 463  Q
    ||||||||||||||||||| ||||  |||||||  |||||||||||||||||    
T  23939127 aaaaatcaaaataaatcgagacttgatcggaatgatacgaaactttacagac 23939076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 778 - 821
Target Start/End: Original strand, 48556721 - 48556764
Alignment:
Q  778 gaaaatttgcagatcctctatatgtatttttatagaggtgtctg 821  Q
    |||| |||||| ||| ||||||||||||||||||||||||||||    
T  48556721 gaaactttgcacatcatctatatgtatttttatagaggtgtctg 48556764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 231 - 276
Target Start/End: Complemental strand, 1299149 - 1299103
Alignment:
Q  231 agaaaattgctttttt-atatagaaaacttcctattgacacaaataa 276  Q
    |||||||||||||||| | |||| |||||||||||||||||||||||    
T  1299149 agaaaattgcttttttgacataggaaacttcctattgacacaaataa 1299103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 413 - 463
Target Start/End: Original strand, 22929302 - 22929352
Alignment:
Q  413 aaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagac 463  Q
    |||||||||||||||| | ||||| || |||| ||||||||||||||||||    
T  22929302 aaaatcaaaataaatctagacttagtctgaatgctacgaaactttacagac 22929352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 404 - 458
Target Start/End: Complemental strand, 25694513 - 25694459
Alignment:
Q  404 ttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaacttta 458  Q
    ||||||| ||||||||||||| ||||| ||||| ||| ||| |||||||||||||    
T  25694513 ttcggtcgaaaaatcaaaatagatcgagacttagtcgaaatgctacgaaacttta 25694459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 567 - 621
Target Start/End: Complemental strand, 25694675 - 25694621
Alignment:
Q  567 ttaaaaattcatatttaatccatccgttctcgaaaaattctaattttttgcggga 621  Q
    ||||||||||||||||||| | |||||| ||||||||||| | ||||||| ||||    
T  25694675 ttaaaaattcatatttaattcgtccgttgtcgaaaaattcaatttttttgtggga 25694621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 778 - 820
Target Start/End: Original strand, 31602093 - 31602135
Alignment:
Q  778 gaaaatttgcagatcctctatatgtatttttatagaggtgtct 820  Q
    |||| |||||| ||| |||||||||||||||||||||||||||    
T  31602093 gaaactttgcacatcatctatatgtatttttatagaggtgtct 31602135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 748 - 821
Target Start/End: Original strand, 6037991 - 6038064
Alignment:
Q  748 aaataaattgaggattactcgaaatactaagaaaatttgcagatcctctatatgtatttttatagaggtgtctg 821  Q
    ||||||||||| |  || ||||||| ||| ||||  ||||||| || |||||||||||||||||||| ||||||    
T  6037991 aaataaattgatgcatattcgaaatgctacgaaacgttgcagacccactatatgtatttttatagagttgtctg 6038064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 392 - 445
Target Start/End: Original strand, 23938979 - 23939032
Alignment:
Q  392 gattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaatt 445  Q
    |||||| | ||||||||||||||||| ||||||||||||   ||||||||||||    
T  23938979 gattttgcacgtttcggtcaaaaaattaaaataaatcgaggattattcggaatt 23939032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 424 - 457
Target Start/End: Original strand, 47610325 - 47610358
Alignment:
Q  424 aaatcgaaacttattcggaattctacgaaacttt 457  Q
    |||||||||||||||||||||| |||||||||||    
T  47610325 aaatcgaaacttattcggaattttacgaaacttt 47610358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 81; Significance: 1e-37; HSPs: 9)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 391 - 622
Target Start/End: Complemental strand, 128313 - 128084
Alignment:
Q  391 tgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagaccctctatattttannnnnnnnagagat 490  Q
    |||||||||||  ||| ||| |||| ||||||||||||||  |||||| ||||| |||| |||||||| ||| ||||||||| |          |||| |    
T  128313 tgattttacgcacttcagtcgaaaactcaaaataaatcgaggcttatttggaatgctacaaaactttatagatcctctatatgt--atttttatagaggt 128216  T
Q  491 gtctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatc 590  Q
    |||||||||||| ||| ||||||||| ||||||||||||| |||||||||||||| ||||||||||| | | ||||||||||||||||||| ||||  ||    
T  128215 gtctgcaaaaaagcagttcaaaattcgatttctaagtcgatgttttgatgttttgatttcttgagtttttgacgcattaaaaattcatattcaatctgtc 128116  T
Q  591 cgttctcgaaaaattctaattttttgcgggaa 622  Q
    ||||  ||||||| |||||||||||| |||||    
T  128115 cgttgccgaaaaactctaattttttgtgggaa 128084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 232 - 356
Target Start/End: Complemental strand, 130612 - 130486
Alignment:
Q  232 gaaaattgctttttt-atatagaaaacttcctattgacacaaataaatgaccaaattactcc-agcggtagttaactgtctctggcatatgcgtcggcag 329  Q
    ||||||||||||||| | |||||| ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| ||||||||| | ||||    
T  130612 gaaaattgcttttttgacatagaatacttcctattgacacaagtaaatgaccaaattactcctagcggtagttaactgtctctagcatatgcgccagcag 130513  T
Q  330 ttaattgccgctggctccttcagaggc 356  Q
    |||| ||||||||| |||| |||||||    
T  130512 ttaactgccgctggttcctccagaggc 130486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 354 - 460
Target Start/End: Original strand, 127299 - 127405
Alignment:
Q  354 ggcagttaactgctgctggctttgatgttttttattatgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaa 453  Q
    ||||||||||||| |||||||||| || |||||||||||||| |||||||||||||  ||||||||||||||||||||| |||||| ||||||||| |||    
T  127299 ggcagttaactgccgctggctttgctgctttttattatgattctacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaa 127398  T
Q  454 ctttaca 460  Q
    |||||||    
T  127399 ctttaca 127405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 228 - 345
Target Start/End: Original strand, 127200 - 127319
Alignment:
Q  228 ttaagaaaattgctttttt-atatagaaaacttcctattgacacaaataaatgaccaaattactcc-agcggtagttaactgtctctggcatatgcgtcg 325  Q
    ||||||||||||||||| | | | |||| ||||||||| ||||||| |||||||||||||||| || ||||||||||||||| |||||||||||| | ||    
T  127200 ttaagaaaattgcttttctgacaaagaatacttcctatcgacacaagtaaatgaccaaattacccccagcggtagttaactgcctctggcatatgtgccg 127299  T
Q  326 gcagttaattgccgctggct 345  Q
    |||||||| |||||||||||    
T  127300 gcagttaactgccgctggct 127319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #5
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 745 - 822
Target Start/End: Complemental strand, 127964 - 127887
Alignment:
Q  745 tcaaaataaattgaggattactcgaaatactaagaaaatttgcagatcctctatatgtatttttatagaggtgtctgc 822  Q
    |||||||||||||||  ||| || |||||||| | | ||||||| |||||||||||||||||||||||||||||||||    
T  127964 tcaaaataaattgagtcttagtcaaaatactacgtagatttgcatatcctctatatgtatttttatagaggtgtctgc 127887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #6
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 788 - 870
Target Start/End: Complemental strand, 128244 - 128162
Alignment:
Q  788 agatcctctatatgtatttttatagaggtgtctgcnnnnnnncagctcaaaattcaatttttaggttgatattttgatgtttt 870  Q
    |||||||||||||||||||||||||||||||||||       ||| ||||||||| |||| || || ||| ||||||||||||    
T  128244 agatcctctatatgtatttttatagaggtgtctgcaaaaaagcagttcaaaattcgatttctaagtcgatgttttgatgtttt 128162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #7
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 567 - 621
Target Start/End: Complemental strand, 127812 - 127758
Alignment:
Q  567 ttaaaaattcatatttaatccatccgttctcgaaaaattctaattttttgcggga 621  Q
    ||||||||||||||||||||| ||| || ||||||||||| ||||||||| ||||    
T  127812 ttaaaaattcatatttaatccgtcctttgtcgaaaaattcaaattttttgtggga 127758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 392 - 457
Target Start/End: Complemental strand, 127505 - 127440
Alignment:
Q  392 gattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaacttt 457  Q
    |||||| ||| |||||||| |||||  |||||||||||| |||||||||||||  ||| |||||||    
T  127505 gattttgcgcatttcggtcgaaaaaataaaataaatcgagacttattcggaatgttacaaaacttt 127440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 412 - 472
Target Start/End: Complemental strand, 127641 - 127580
Alignment:
Q  412 aaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagac-cctctatat 472  Q
    ||||||||||||||||||| ||||| ||| | | ||||||||||||| |||| |||||||||    
T  127641 aaaaatcaaaataaatcgagacttagtcgaattgctacgaaactttagagacacctctatat 127580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055 (Bit Score: 67; Significance: 3e-29; HSPs: 30)
Name: scaffold0055
Description:

Target: scaffold0055; HSP #1
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 399 - 616
Target Start/End: Complemental strand, 35447 - 35232
Alignment:
Q  399 cgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagaccctctatattttannnnnnnnagagatgtctgcaa 498  Q
    |||||||||||| |||||||||||||||||||||| | |||||  |||||||||||||| |||| |||||| || |           ||| || ||||||    
T  35447 cgcgtttcggtcgaaaaatcaaaataaatcgaaacgttttcggttttctacgaaactttgcagatcctctagatgt--atttttattgaggtgcctgcaa 35350  T
Q  499 aaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatccgttctcg 598  Q
    |||||||| ||||| ||| ||||||| ||||| ||||||||  || ||||||||||||| ||| ||| | ||||||||||||||||||| ||| |  |||    
T  35349 aaaaccagctcaaagttcgatttctaggtcgatgttttgattcttcggtttcttgagttttcgacgcgtaaaaaattcatatttaatccgtccctcgtcg 35250  T
Q  599 aaaaattctaattttttg 616  Q
     |||||||||||||||||    
T  35249 gaaaattctaattttttg 35232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055; HSP #2
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 399 - 616
Target Start/End: Complemental strand, 34323 - 34108
Alignment:
Q  399 cgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagaccctctatattttannnnnnnnagagatgtctgcaa 498  Q
    |||||||||||| |||||||||||||||||||||| |  ||||  |||||||||||||| |||| |||||| || |           ||| || ||||||    
T  34323 cgcgtttcggtcgaaaaatcaaaataaatcgaaacgttgtcggttttctacgaaactttgcagatcctctagatgt--atttttattgaggtgcctgcaa 34226  T
Q  499 aaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatccgttctcg 598  Q
    |||||||| ||||| ||| ||||||| ||||| ||||||||  || ||||||||||||| ||| ||| | ||||||||||||||||||| ||| |  |||    
T  34225 aaaaccagctcaaagttcgatttctaggtcgatgttttgattcttcggtttcttgagttttcgacgcgtaaaaaattcatatttaatccgtccctcgtcg 34126  T
Q  599 aaaaattctaattttttg 616  Q
     |||||||||||||||||    
T  34125 gaaaattctaattttttg 34108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055; HSP #3
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 399 - 616
Target Start/End: Complemental strand, 53495 - 53280
Alignment:
Q  399 cgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagaccctctatattttannnnnnnnagagatgtctgcaa 498  Q
    |||||||||||| |||||||||||||||||||||| |  ||||  |||||||||||||| |||| |||||| || |           ||| || ||||||    
T  53495 cgcgtttcggtcgaaaaatcaaaataaatcgaaacgttgtcggttttctacgaaactttgcagatcctctagatgt--atttttattgaggtgcctgcaa 53398  T
Q  499 aaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatccgttctcg 598  Q
    |||||||| ||||| ||| ||||||| ||||| ||||||||  || ||||||||||||| ||| ||| | ||||||||||||||||||| ||| |  |||    
T  53397 aaaaccagctcaaagttcgatttctaggtcgatgttttgattcttcggtttcttgagttttcgacgcgtaaaaaattcatatttaatccgtccctcgtcg 53298  T
Q  599 aaaaattctaattttttg 616  Q
     |||||||||||||||||    
T  53297 gaaaattctaattttttg 53280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055; HSP #4
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 400 - 616
Target Start/End: Original strand, 18855 - 19069
Alignment:
Q  400 gcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagaccctctatattttannnnnnnnagagatgtctgcaaa 499  Q
    ||||||||||| |||| ||||||||||||||||| |  ||||  |||||||||||||| |||| |||||| || |           ||| || |||||||    
T  18855 gcgtttcggtcgaaaattcaaaataaatcgaaacgttgtcggttttctacgaaactttgcagatcctctagatgt--atttttattgaggtgcctgcaaa 18952  T
Q  500 aaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatccgttctcga 599  Q
    ||||||| ||||| ||| ||||||| ||||| ||||||||  || ||||||||||||| ||| ||| | ||||||||||||||||||| ||| |  |||     
T  18953 aaaccagctcaaagttcgatttctaggtcgatgttttgattcttcggtttcttgagttttcgacgcgtaaaaaattcatatttaatccgtccctcgtcgg 19052  T
Q  600 aaaattctaattttttg 616  Q
    |||||||||||||||||    
T  19053 aaaattctaattttttg 19069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055; HSP #5
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 400 - 616
Target Start/End: Complemental strand, 36491 - 36277
Alignment:
Q  400 gcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagaccctctatattttannnnnnnnagagatgtctgcaaa 499  Q
    ||||||||||| |||| ||||||||||||||||| |  ||||  |||||||||||||| |||| |||||| || |           ||| || |||||||    
T  36491 gcgtttcggtcgaaaattcaaaataaatcgaaacgttgtcggttttctacgaaactttgcagatcctctagatgt--atttttattgaggtgcctgcaaa 36394  T
Q  500 aaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatccgttctcga 599  Q
    ||||||| ||||| ||| ||||||| ||||| ||||||||  || ||||||||||||| ||| ||| | ||||||||||||||||||| ||| |  |||     
T  36393 aaaccagctcaaagttcgatttctaggtcgatgttttgattcttcggtttcttgagttttcgacgcgtaaaaaattcatatttaatccgtccctcgtcgg 36294  T
Q  600 aaaattctaattttttg 616  Q
    |||||||||||||||||    
T  36293 aaaattctaattttttg 36277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055; HSP #6
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 400 - 616
Target Start/End: Complemental strand, 44152 - 43938
Alignment:
Q  400 gcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagaccctctatattttannnnnnnnagagatgtctgcaaa 499  Q
    ||||||||||| |||| ||||||||||||||||| |  ||||  |||||||||||||| |||| |||||| || |           ||| || |||||||    
T  44152 gcgtttcggtcgaaaattcaaaataaatcgaaacgttgtcggttttctacgaaactttgcagatcctctagatgt--atttttattgaggtgcctgcaaa 44055  T
Q  500 aaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatccgttctcga 599  Q
    ||||||| ||||| ||| ||||||| ||||| ||||||||  || ||||||||||||| ||| ||| | ||||||||||||||||||| ||| |  |||     
T  44054 aaaccagctcaaagttcgatttctaggtcgatgttttgattcttcggtttcttgagttttcgacgcgtaaaaaattcatatttaatccgtccctcgtcgg 43955  T
Q  600 aaaattctaattttttg 616  Q
    |||||||||||||||||    
T  43954 aaaattctaattttttg 43938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055; HSP #7
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 493 - 616
Target Start/End: Complemental strand, 56787 - 56664
Alignment:
Q  493 ctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatccg 592  Q
    |||||||||||||| ||||| ||| ||||||| ||||| ||||||||  || ||||||||||||| ||| ||| | ||||||||||||||||||| |||     
T  56787 ctgcaaaaaaccagctcaaagttcgatttctaggtcgatgttttgattcttcggtttcttgagttttcgacgcgtaaaaaattcatatttaatccgtccc 56688  T
Q  593 ttctcgaaaaattctaattttttg 616  Q
    |  ||| |||||||||||||||||    
T  56687 tcgtcggaaaattctaattttttg 56664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055; HSP #8
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 493 - 616
Target Start/End: Complemental strand, 75448 - 75325
Alignment:
Q  493 ctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatccg 592  Q
    |||||||||||||| ||||| ||| ||||||| ||||| ||||||||  || ||||||||| ||| ||| ||| | ||||||||||||||||||| |||     
T  75448 ctgcaaaaaaccagctcaaagttcgatttctaggtcgatgttttgattcttcggtttcttgtgttttcgacgcgtaaaaaattcatatttaatccgtccc 75349  T
Q  593 ttctcgaaaaattctaattttttg 616  Q
    |  ||| |||||||||||||||||    
T  75348 tcgtcggaaaattctaattttttg 75325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 493 - 615
Target Start/End: Complemental strand, 74421 - 74299
Alignment:
Q  493 ctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatccg 592  Q
    |||||||||| ||| ||||||||| ||||||| ||||| ||||||||||   | |||||| | || | ||||| | ||||||||||||||||||| |||     
T  74421 ctgcaaaaaatcagctcaaaattcgatttctaggtcgatgttttgatgtcacgctttctttactttttggcgcgtaaaaaattcatatttaatccgtccc 74322  T
Q  593 ttctcgaaaaattctaatttttt 615  Q
    |  ||||||||||||||||||||    
T  74321 tcgtcgaaaaattctaatttttt 74299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055; HSP #10
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 399 - 615
Target Start/End: Complemental strand, 55841 - 55627
Alignment:
Q  399 cgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagaccctctatattttannnnnnnnagagatgtctgcaa 498  Q
    |||||||||||| |||||||||||||||||||||| |  ||||  ||||||| |||||| |||| |||||| || |           ||| || ||||||    
T  55841 cgcgtttcggtcgaaaaatcaaaataaatcgaaacgttgtcggttttctacgcaactttgcagatcctctagatgt--atttttattgaggtgcctgcaa 55744  T
Q  499 aaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatccgttctcg 598  Q
    |||| ||| ||||||||| ||||||| ||||| ||||||||||   | |||||| | || | ||||| | ||||||||||||||||||| ||| |  |||    
T  55743 aaaatcagctcaaaattcgatttctaggtcgatgttttgatgtcacgctttctttactttttggcgcgtaaaaaattcatatttaatccgtccctcgtcg 55644  T
Q  599 aaaaattctaatttttt 615  Q
     ||||||||||||||||    
T  55643 gaaaattctaatttttt 55627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055; HSP #11
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 493 - 615
Target Start/End: Complemental strand, 43035 - 42913
Alignment:
Q  493 ctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatccg 592  Q
    |||||||||| ||| ||||||||| ||||||| ||||| ||||||||||   | |||||| | || | ||||| | ||||||||||||||||||| |||     
T  43035 ctgcaaaaaatcagctcaaaattcgatttctaggtcgatgttttgatgtcacgctttctttactttttggcgcgtaaaaaattcatatttaatccgtccc 42936  T
Q  593 ttctcgaaaaattctaatttttt 615  Q
    |  ||| ||||||||||||||||    
T  42935 tcgtcggaaaattctaatttttt 42913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 399 - 615
Target Start/End: Original strand, 19892 - 20106
Alignment:
Q  399 cgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagaccctctatattttannnnnnnnagagatgtctgcaa 498  Q
    |||||||||||| |||||||||||||||||||||| |  ||||  ||||||| |||||| |||| |||||| || |           ||| || ||||||    
T  19892 cgcgtttcggtcgaaaaatcaaaataaatcgaaacgttgtcggttttctacgcaactttgcagatcctctagatgt--atttttattgaggtgcctgcaa 19989  T
Q  499 aaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatccgttctcg 598  Q
    |||| ||| ||||||||| ||||||| ||||| ||||||||||   | |||||| | || | ||||| | ||||||||||||||||||| ||| |  | |    
T  19990 aaaatcagctcaaaattcgatttctaggtcgatgttttgatgtcacgctttctttactttttggcgcgtaaaaaattcatatttaatccgtccctcgttg 20089  T
Q  599 aaaaattctaatttttt 615  Q
     ||||||||||||||||    
T  20090 gaaaattctaatttttt 20106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 392 - 621
Target Start/End: Original strand, 11510 - 11737
Alignment:
Q  392 gattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagaccctctatattttannnnnnnnagagatg 491  Q
    |||||| |||||||||||| |||| ||||||||||||||||| |  ||||  |||||||||||||| |||| |||||| || |           ||| ||    
T  11510 gattttgcgcgtttcggtcgaaaattcaaaataaatcgaaaccttgtcggctttctacgaaactttgcagatcctctagatgt--atttttattgaggtg 11607  T
Q  492 tctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatcc 591  Q
     ||| |||||| ||| ||||||||| |||||||  | |  ||||||||   | ||||||||||||| | | ||| | |||||||||||||| |||| |||    
T  11608 cctgtaaaaaatcagctcaaaattcgatttctagcttggtgttttgattcctcggtttcttgagtttttgacgcgtaaaaaattcatatttgatccgtcc 11707  T
Q  592 gttctcgaaaaattctaattttttgcggga 621  Q
     |  ||| ||||||||||||||||||||||    
T  11708 ctcgtcggaaaattctaattttttgcggga 11737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055; HSP #14
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 783 - 867
Target Start/End: Original strand, 19948 - 20032
Alignment:
Q  783 tttgcagatcctctatatgtatttttatagaggtgtctgcnnnnnnncagctcaaaattcaatttttaggttgatattttgatgt 867  Q
    ||||||||||||||| |||||||||||| |||||| ||||       ||||||||||||| |||| ||||| ||| |||||||||    
T  19948 tttgcagatcctctagatgtatttttattgaggtgcctgcaaaaaatcagctcaaaattcgatttctaggtcgatgttttgatgt 20032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055; HSP #15
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 783 - 867
Target Start/End: Complemental strand, 43071 - 42987
Alignment:
Q  783 tttgcagatcctctatatgtatttttatagaggtgtctgcnnnnnnncagctcaaaattcaatttttaggttgatattttgatgt 867  Q
    ||||||||||||||| |||||||||||| |||||| ||||       ||||||||||||| |||| ||||| ||| |||||||||    
T  43071 tttgcagatcctctagatgtatttttattgaggtgcctgcaaaaaatcagctcaaaattcgatttctaggtcgatgttttgatgt 42987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055; HSP #16
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 783 - 867
Target Start/End: Complemental strand, 55785 - 55701
Alignment:
Q  783 tttgcagatcctctatatgtatttttatagaggtgtctgcnnnnnnncagctcaaaattcaatttttaggttgatattttgatgt 867  Q
    ||||||||||||||| |||||||||||| |||||| ||||       ||||||||||||| |||| ||||| ||| |||||||||    
T  55785 tttgcagatcctctagatgtatttttattgaggtgcctgcaaaaaatcagctcaaaattcgatttctaggtcgatgttttgatgt 55701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055; HSP #17
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 783 - 867
Target Start/End: Complemental strand, 74457 - 74373
Alignment:
Q  783 tttgcagatcctctatatgtatttttatagaggtgtctgcnnnnnnncagctcaaaattcaatttttaggttgatattttgatgt 867  Q
    ||||||||||||||| |||||||||||| |||||| ||||       ||||||||||||| |||| ||||| ||| |||||||||    
T  74457 tttgcagatcctctagatgtatttttattgaggtgcctgcaaaaaatcagctcaaaattcgatttctaggtcgatgttttgatgt 74373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055; HSP #18
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 485 - 541
Target Start/End: Original strand, 11113 - 11169
Alignment:
Q  485 agagatgtctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgt 541  Q
    ||||||| |||||||||||||| ||||||||| ||||||| || || ||||||||||    
T  11113 agagatgcctgcaaaaaaccagctcaaaattcgatttctatgtagatgttttgatgt 11169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055; HSP #19
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 485 - 541
Target Start/End: Original strand, 29926 - 29982
Alignment:
Q  485 agagatgtctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgt 541  Q
    ||||||| |||||||||||||| ||||||||| ||||||| || || ||||||||||    
T  29926 agagatgcctgcaaaaaaccagctcaaaattcgatttctaggtggatgttttgatgt 29982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055; HSP #20
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 778 - 865
Target Start/End: Original strand, 18905 - 18992
Alignment:
Q  778 gaaaatttgcagatcctctatatgtatttttatagaggtgtctgcnnnnnnncagctcaaaattcaatttttaggttgatattttgat 865  Q
    |||| ||||||||||||||| |||||||||||| |||||| ||||       ||||||||| ||| |||| ||||| ||| |||||||    
T  18905 gaaactttgcagatcctctagatgtatttttattgaggtgcctgcaaaaaaccagctcaaagttcgatttctaggtcgatgttttgat 18992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055; HSP #21
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 778 - 865
Target Start/End: Complemental strand, 34272 - 34185
Alignment:
Q  778 gaaaatttgcagatcctctatatgtatttttatagaggtgtctgcnnnnnnncagctcaaaattcaatttttaggttgatattttgat 865  Q
    |||| ||||||||||||||| |||||||||||| |||||| ||||       ||||||||| ||| |||| ||||| ||| |||||||    
T  34272 gaaactttgcagatcctctagatgtatttttattgaggtgcctgcaaaaaaccagctcaaagttcgatttctaggtcgatgttttgat 34185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055; HSP #22
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 778 - 865
Target Start/End: Complemental strand, 35396 - 35309
Alignment:
Q  778 gaaaatttgcagatcctctatatgtatttttatagaggtgtctgcnnnnnnncagctcaaaattcaatttttaggttgatattttgat 865  Q
    |||| ||||||||||||||| |||||||||||| |||||| ||||       ||||||||| ||| |||| ||||| ||| |||||||    
T  35396 gaaactttgcagatcctctagatgtatttttattgaggtgcctgcaaaaaaccagctcaaagttcgatttctaggtcgatgttttgat 35309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055; HSP #23
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 778 - 865
Target Start/End: Complemental strand, 36441 - 36354
Alignment:
Q  778 gaaaatttgcagatcctctatatgtatttttatagaggtgtctgcnnnnnnncagctcaaaattcaatttttaggttgatattttgat 865  Q
    |||| ||||||||||||||| |||||||||||| |||||| ||||       ||||||||| ||| |||| ||||| ||| |||||||    
T  36441 gaaactttgcagatcctctagatgtatttttattgaggtgcctgcaaaaaaccagctcaaagttcgatttctaggtcgatgttttgat 36354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055; HSP #24
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 399 - 469
Target Start/End: Complemental strand, 43127 - 43057
Alignment:
Q  399 cgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagaccctcta 469  Q
    |||||||||||| |||||||||||||||||||||| |  ||||  |||| || |||||| |||| ||||||    
T  43127 cgcgtttcggtcgaaaaatcaaaataaatcgaaacgttgtcggttttctgcgcaactttgcagatcctcta 43057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055; HSP #25
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 778 - 865
Target Start/End: Complemental strand, 44102 - 44015
Alignment:
Q  778 gaaaatttgcagatcctctatatgtatttttatagaggtgtctgcnnnnnnncagctcaaaattcaatttttaggttgatattttgat 865  Q
    |||| ||||||||||||||| |||||||||||| |||||| ||||       ||||||||| ||| |||| ||||| ||| |||||||    
T  44102 gaaactttgcagatcctctagatgtatttttattgaggtgcctgcaaaaaaccagctcaaagttcgatttctaggtcgatgttttgat 44015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055; HSP #26
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 778 - 865
Target Start/End: Complemental strand, 53444 - 53357
Alignment:
Q  778 gaaaatttgcagatcctctatatgtatttttatagaggtgtctgcnnnnnnncagctcaaaattcaatttttaggttgatattttgat 865  Q
    |||| ||||||||||||||| |||||||||||| |||||| ||||       ||||||||| ||| |||| ||||| ||| |||||||    
T  53444 gaaactttgcagatcctctagatgtatttttattgaggtgcctgcaaaaaaccagctcaaagttcgatttctaggtcgatgttttgat 53357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055; HSP #27
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 778 - 865
Target Start/End: Complemental strand, 56828 - 56741
Alignment:
Q  778 gaaaatttgcagatcctctatatgtatttttatagaggtgtctgcnnnnnnncagctcaaaattcaatttttaggttgatattttgat 865  Q
    |||| ||||||||||||||| |||||||||||| |||||| ||||       ||||||||| ||| |||| ||||| ||| |||||||    
T  56828 gaaactttgcagatcctctagatgtatttttattgaggtgcctgcaaaaaaccagctcaaagttcgatttctaggtcgatgttttgat 56741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055; HSP #28
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 399 - 469
Target Start/End: Complemental strand, 74513 - 74443
Alignment:
Q  399 cgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagaccctcta 469  Q
    |||||||||||| |||||||||||||||||||||| |  ||||  |||| || |||||| |||| ||||||    
T  74513 cgcgtttcggtcgaaaaatcaaaataaatcgaaacgttgtcggttttctgcgcaactttgcagatcctcta 74443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 532 - 621
Target Start/End: Original strand, 3655 - 3744
Alignment:
Q  532 gttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatccgttctcgaaaaattctaattttttgcggga 621  Q
    |||||||| ||| ||||||||||||| | | ||| | |||||| ||||||| |||| ||| |  ||| ||||||||||||||||| ||||    
T  3655 gttttgatttttcggtttcttgagtttttgacgcgtaaaaaatacatatttgatccgtccctcgtcggaaaattctaattttttgtggga 3744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 400 - 469
Target Start/End: Complemental strand, 56878 - 56809
Alignment:
Q  400 gcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagaccctcta 469  Q
    ||||||||||| |||| ||||||||||||||||| |  ||||  || ||||||||||| |||| ||||||    
T  56878 gcgtttcggtcgaaaattcaaaataaatcgaaacgttgtcggttttatacgaaactttgcagatcctcta 56809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 65; Significance: 4e-28; HSPs: 3)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 390 - 621
Target Start/End: Original strand, 10781 - 11010
Alignment:
Q  390 atgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagaccctctatat-tttannnnnnnnagag 488  Q
    |||||||| |||||||||||| |||||||||||||||||||||| |  ||||  |||||||||||||| |||| |||||| || ||||         |||    
T  10781 atgattttgcgcgtttcggtcgaaaaatcaaaataaatcgaaacgttgtcggttttctacgaaacttttcagatcctctagatgtttatttatt---gag 10877  T
Q  489 atgtctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatcca 588  Q
     |||||||||||||| || ||||||||| ||||||| || || ||||||||  |||||||||||||||| | | ||| | |||||||||||||||||       
T  10878 gtgtctgcaaaaaactagctcaaaattcgatttctaggttgatgttttgattctttggtttcttgagtttttgacgcgtcaaaaattcatatttaatttg 10977  T
Q  589 tccgttctcgaaaaattctaattttttgcggga 621  Q
    ||| |  ||| ||||||||||||||||| ||||    
T  10978 tccctcgtcggaaaattctaattttttgtggga 11010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515; HSP #2
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 392 - 616
Target Start/End: Original strand, 11830 - 12052
Alignment:
Q  392 gattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagaccctctatattttannnnnnnnagagatg 491  Q
    |||||| |||||||| ||| |||||||||||||||||||  |||   |||||||| |||||||||| |||| |||||| || |           ||| ||    
T  11830 gattttgcgcgtttcagtcgaaaaatcaaaataaatcgaggctttgacggaattccacgaaacttttcagatcctctagatgt--attattattgaggtg 11927  T
Q  492 tctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatcc 591  Q
    ||||||||||||||| ||||||||| ||||||| ||||| ||||||||||   | |||||| |||| | ||||||| ||| ||||||||||||||| |||    
T  11928 tctgcaaaaaaccagctcaaaattcgatttctaggtcgatgttttgatgtcacgctttctttagtttttggcgcataaaatattcatatttaatccgtcc 12027  T
Q  592 gttctcgaaaaattctaattttttg 616  Q
     |  ||| |||||||||||||||||    
T  12028 ctcgtcggaaaattctaattttttg 12052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515; HSP #3
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 778 - 867
Target Start/End: Original strand, 11888 - 11977
Alignment:
Q  778 gaaaatttgcagatcctctatatgtatttttatagaggtgtctgcnnnnnnncagctcaaaattcaatttttaggttgatattttgatgt 867  Q
    |||| ||| ||||||||||| ||||||| |||| |||||||||||       ||||||||||||| |||| ||||| ||| |||||||||    
T  11888 gaaacttttcagatcctctagatgtattattattgaggtgtctgcaaaaaaccagctcaaaattcgatttctaggtcgatgttttgatgt 11977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 61; Significance: 1e-25; HSPs: 8)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 390 - 621
Target Start/End: Original strand, 37177 - 37406
Alignment:
Q  390 atgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagaccctctatat-tttannnnnnnnagag 488  Q
    |||||||| |||||||| ||| |||||||||||||||||||||| |  ||||  |||||||||||||| |||| |||||| || ||||         |||    
T  37177 atgattttgcgcgtttcagtcgaaaaatcaaaataaatcgaaacgttgtcggttttctacgaaacttttcagatcctctagatgtttatttatt---gag 37273  T
Q  489 atgtctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatcca 588  Q
     |||||||||||||| || ||||||||| ||||||| || || ||||||||  |||||||||||||||| | | ||| | |||||||||||||||||       
T  37274 gtgtctgcaaaaaactagctcaaaattcgatttctaggttgatgttttgattctttggtttcttgagtttttgacgcgtcaaaaattcatatttaatttg 37373  T
Q  589 tccgttctcgaaaaattctaattttttgcggga 621  Q
    ||| |  ||| ||||||||||||||||| ||||    
T  37374 tccctcgtcggaaaattctaattttttgtggga 37406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #2
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 390 - 621
Target Start/End: Original strand, 18350 - 18580
Alignment:
Q  390 atgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagaccctctatat-tttannnnnnnnagag 488  Q
    |||||||| |||||||||||| |||||||||||||||||||||| |  ||||  |||||||||||||| |||| |||||| || ||||         |||    
T  18350 atgattttgcgcgtttcggtcgaaaaatcaaaataaatcgaaacgttgtcggttttctacgaaacttttcagatcctctagatgtttatttatt---gag 18446  T
Q  489 atgtctgc-aaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatcc 587  Q
     ||||||| ||||||| || ||||||||| ||||||| || || ||||||||  |||||||||||||||| | | ||| | |||||||||||||||||      
T  18447 gtgtctgcaaaaaaactagctcaaaattcgatttctaggttgatgttttgattctttggtttcttgagtttttgacgcgtcaaaaattcatatttaattt 18546  T
Q  588 atccgttctcgaaaaattctaattttttgcggga 621  Q
     ||| |  ||| ||||||||||||||||| ||||    
T  18547 gtccctcgtcggaaaattctaattttttgtggga 18580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #3
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 392 - 616
Target Start/End: Original strand, 19400 - 19622
Alignment:
Q  392 gattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagaccctctatattttannnnnnnnagagatg 491  Q
    |||||| |||||||| ||| |||||||||||||||||||  |||   |||||||| |||||||||| |||| |||||| || |           ||| ||    
T  19400 gattttgcgcgtttcagtcgaaaaatcaaaataaatcgaggctttgacggaattccacgaaacttttcagatcctctagatgt--attattattgaggtg 19497  T
Q  492 tctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatcc 591  Q
    ||||||||||||||| ||||||||| ||||||| ||||| ||||||||||   | |||||| |||| | ||||||| ||| ||||||||||||||| |||    
T  19498 tctgcaaaaaaccagctcaaaattcgatttctaggtcgatgttttgatgtcacgctttctttagtttttggcgcataaaatattcatatttaatccgtcc 19597  T
Q  592 gttctcgaaaaattctaattttttg 616  Q
     |  ||| |||||||||||||||||    
T  19598 ctcgtcggaaaattctaattttttg 19622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #4
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 392 - 616
Target Start/End: Complemental strand, 33312 - 33090
Alignment:
Q  392 gattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagaccctctatattttannnnnnnnagagatg 491  Q
    |||||| |||||||| ||| |||||||||||||||||||  |||   |||||||| |||||||||| |||| |||||| || |           ||| ||    
T  33312 gattttgcgcgtttcagtcgaaaaatcaaaataaatcgaggctttgacggaattccacgaaacttttcagatcctctagatgt--attattattgaggtg 33215  T
Q  492 tctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatcc 591  Q
    ||||||||||||||| ||||||||| ||||||| ||||| ||||||||||   | |||||| |||| | ||||||| ||| ||||||||||||||| |||    
T  33214 tctgcaaaaaaccagctcaaaattcgatttctaggtcgatgttttgatgtcacgctttctttagtttttggcgcataaaatattcatatttaatccgtcc 33115  T
Q  592 gttctcgaaaaattctaattttttg 616  Q
     |  ||| |||||||||||||||||    
T  33114 ctcgtcggaaaattctaattttttg 33090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #5
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 392 - 616
Target Start/End: Original strand, 38226 - 38448
Alignment:
Q  392 gattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagaccctctatattttannnnnnnnagagatg 491  Q
    |||||| |||||||| ||| |||||||||||||||||||  |||   |||||||| |||||||||| |||| |||||| || |           ||| ||    
T  38226 gattttgcgcgtttcagtcgaaaaatcaaaataaatcgaggctttgacggaattccacgaaacttttcagatcctctagatgt--attattattgaggtg 38323  T
Q  492 tctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatcc 591  Q
    ||||||||||||||| ||||||||| ||||||| ||||| ||||||||||   | |||||| |||| | ||||||| ||| ||||||||||||||| |||    
T  38324 tctgcaaaaaaccagctcaaaattcgatttctaggtcgatgttttgatgtcacgctttctttagtttttggcgcataaaatattcatatttaatccgtcc 38423  T
Q  592 gttctcgaaaaattctaattttttg 616  Q
     |  ||| |||||||||||||||||    
T  38424 ctcgtcggaaaattctaattttttg 38448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #6
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 778 - 867
Target Start/End: Original strand, 19458 - 19547
Alignment:
Q  778 gaaaatttgcagatcctctatatgtatttttatagaggtgtctgcnnnnnnncagctcaaaattcaatttttaggttgatattttgatgt 867  Q
    |||| ||| ||||||||||| ||||||| |||| |||||||||||       ||||||||||||| |||| ||||| ||| |||||||||    
T  19458 gaaacttttcagatcctctagatgtattattattgaggtgtctgcaaaaaaccagctcaaaattcgatttctaggtcgatgttttgatgt 19547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #7
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 778 - 867
Target Start/End: Complemental strand, 33254 - 33165
Alignment:
Q  778 gaaaatttgcagatcctctatatgtatttttatagaggtgtctgcnnnnnnncagctcaaaattcaatttttaggttgatattttgatgt 867  Q
    |||| ||| ||||||||||| ||||||| |||| |||||||||||       ||||||||||||| |||| ||||| ||| |||||||||    
T  33254 gaaacttttcagatcctctagatgtattattattgaggtgtctgcaaaaaaccagctcaaaattcgatttctaggtcgatgttttgatgt 33165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #8
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 778 - 867
Target Start/End: Original strand, 38284 - 38373
Alignment:
Q  778 gaaaatttgcagatcctctatatgtatttttatagaggtgtctgcnnnnnnncagctcaaaattcaatttttaggttgatattttgatgt 867  Q
    |||| ||| ||||||||||| ||||||| |||| |||||||||||       ||||||||||||| |||| ||||| ||| |||||||||    
T  38284 gaaacttttcagatcctctagatgtattattattgaggtgtctgcaaaaaaccagctcaaaattcgatttctaggtcgatgttttgatgt 38373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052 (Bit Score: 59; Significance: 2e-24; HSPs: 27)
Name: scaffold0052
Description:

Target: scaffold0052; HSP #1
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 399 - 616
Target Start/End: Original strand, 61741 - 61956
Alignment:
Q  399 cgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagaccctctatattttannnnnnnnagagatgtctgcaa 498  Q
    ||||||| |||| |||||||||||||||||||||| |  ||||  |||||||||||||| |||| |||||| || |           ||| || ||||||    
T  61741 cgcgttttggtcgaaaaatcaaaataaatcgaaacgttgtcggttttctacgaaactttgcagatcctctagatgt--atttttattgaggtgcctgcaa 61838  T
Q  499 aaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatccgttctcg 598  Q
    |||||||| ||||| ||| ||||||| ||||| ||||||||  || ||||||||||||| ||| ||| | ||||||||||||||||||| ||| |  |||    
T  61839 aaaaccagctcaaagttcgatttctaggtcgatgttttgattcttcggtttcttgagttttcgacgcgtaaaaaattcatatttaatccgtccctcgtcg 61938  T
Q  599 aaaaattctaattttttg 616  Q
     |||||||||||||||||    
T  61939 gaaaattctaattttttg 61956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052; HSP #2
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 400 - 616
Target Start/End: Original strand, 2737 - 2951
Alignment:
Q  400 gcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagaccctctatattttannnnnnnnagagatgtctgcaaa 499  Q
    ||||||||||| |||| ||||||||||||||||| |  ||||  |||||||||||||| |||| |||||| || |           ||| || |||||||    
T  2737 gcgtttcggtcgaaaattcaaaataaatcgaaacgttgtcggttttctacgaaactttgcagatcctctagatgt--atttttattgaggtgcctgcaaa 2834  T
Q  500 aaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatccgttctcga 599  Q
    ||||||| ||||| ||| ||||||| ||||| ||||||||  || ||||||||||||| ||| ||| | ||||||||||||||||||| ||| |  |||     
T  2835 aaaccagctcaaagttcgatttctaggtcgatgttttgattcttcggtttcttgagttttcgacgcgtaaaaaattcatatttaatccgtccctcgtcgg 2934  T
Q  600 aaaattctaattttttg 616  Q
    |||||||||||||||||    
T  2935 aaaattctaattttttg 2951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052; HSP #3
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 400 - 616
Target Start/End: Original strand, 17273 - 17487
Alignment:
Q  400 gcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagaccctctatattttannnnnnnnagagatgtctgcaaa 499  Q
    ||||||||||| |||| ||||||||||||||||| |  ||||  |||||||||||||| |||| |||||| || |           ||| || |||||||    
T  17273 gcgtttcggtcgaaaattcaaaataaatcgaaacgttgtcggttttctacgaaactttgcagatcctctagatgt--atttttattgaggtgcctgcaaa 17370  T
Q  500 aaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatccgttctcga 599  Q
    ||||||| ||||| ||| ||||||| ||||| ||||||||  || ||||||||||||| ||| ||| | ||||||||||||||||||| ||| |  |||     
T  17371 aaaccagctcaaagttcgatttctaggtcgatgttttgattcttcggtttcttgagttttcgacgcgtaaaaaattcatatttaatccgtccctcgtcgg 17470  T
Q  600 aaaattctaattttttg 616  Q
    |||||||||||||||||    
T  17471 aaaattctaattttttg 17487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052; HSP #4
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 400 - 616
Target Start/End: Original strand, 40753 - 40967
Alignment:
Q  400 gcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagaccctctatattttannnnnnnnagagatgtctgcaaa 499  Q
    ||||||||||| |||| ||||||||||||||||| |  ||||  |||||||||||||| |||| |||||| || |           ||| || |||||||    
T  40753 gcgtttcggtcgaaaattcaaaataaatcgaaacgttgtcggttttctacgaaactttgcagatcctctagatgt--atttttattgaggtgcctgcaaa 40850  T
Q  500 aaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatccgttctcga 599  Q
    ||||||| ||||| ||| ||||||| ||||| ||||||||  || ||||||||||||| ||| ||| | ||||||||||||||||||| ||| |  |||     
T  40851 aaaccagctcaaagttcgatttctaggtcgatgttttgattcttcggtttcttgagttttcgacgcgtaaaaaattcatatttaatccgtccctcgtcgg 40950  T
Q  600 aaaattctaattttttg 616  Q
    |||||||||||||||||    
T  40951 aaaattctaattttttg 40967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052; HSP #5
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 493 - 616
Target Start/End: Complemental strand, 54391 - 54268
Alignment:
Q  493 ctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatccg 592  Q
    |||||||||||||| ||||| ||| ||||||| ||||| ||||||||  || ||||||||||||| ||| ||| | ||||||||||||||||||| |||     
T  54391 ctgcaaaaaaccagctcaaagttcgatttctaggtcgatgttttgattcttcggtttcttgagttttcgacgcgtaaaaaattcatatttaatccgtccc 54292  T
Q  593 ttctcgaaaaattctaattttttg 616  Q
    |  ||| |||||||||||||||||    
T  54291 tcgtcggaaaattctaattttttg 54268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 493 - 615
Target Start/End: Complemental strand, 30146 - 30024
Alignment:
Q  493 ctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatccg 592  Q
    |||||||||| ||| ||||||||| ||||||| ||||| ||||||||||   | |||||| | || | ||||| | ||||||||||||||||||| |||     
T  30146 ctgcaaaaaatcagctcaaaattcgatttctaggtcgatgttttgatgtcacgctttctttactttttggcgcgtaaaaaattcatatttaatccgtccc 30047  T
Q  593 ttctcgaaaaattctaatttttt 615  Q
    |  ||||||||||||||||||||    
T  30046 tcgtcgaaaaattctaatttttt 30024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052; HSP #7
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 399 - 615
Target Start/End: Original strand, 41790 - 42004
Alignment:
Q  399 cgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagaccctctatattttannnnnnnnagagatgtctgcaa 498  Q
    |||||||||||| |||||||||||||||||||||| |  ||||  ||||||| |||||| |||| |||||| || |           ||| || ||||||    
T  41790 cgcgtttcggtcgaaaaatcaaaataaatcgaaacgttgtcggttttctacgcaactttgcagatcctctagatgt--atttttattgaggtgcctgcaa 41887  T
Q  499 aaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatccgttctcg 598  Q
    |||| ||| ||||||||| ||||||| ||||| ||||||||||   | |||||| | || | ||||| | ||||||||||||||||||| ||| |  |||    
T  41888 aaaatcagctcaaaattcgatttctaggtcgatgttttgatgtcacgctttctttactttttggcgcgtaaaaaattcatatttaatccgtccctcgtcg 41987  T
Q  599 aaaaattctaatttttt 615  Q
     ||||||||||||||||    
T  41988 gaaaattctaatttttt 42004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052; HSP #8
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 399 - 615
Target Start/End: Complemental strand, 53447 - 53233
Alignment:
Q  399 cgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagaccctctatattttannnnnnnnagagatgtctgcaa 498  Q
    |||||||||||| |||||||||||||||||||||| |  ||||  ||||||| |||||| |||| |||||| || |           ||| || ||||||    
T  53447 cgcgtttcggtcgaaaaatcaaaataaatcgaaacgttgtcggttttctacgcaactttgcagatcctctagatgt--atttttattgaggtgcctgcaa 53350  T
Q  499 aaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatccgttctcg 598  Q
    |||| ||| ||||||||| ||||||| ||||| ||||||||||   | |||||| | || | ||||| | ||||||||||||||||||| ||| |  |||    
T  53349 aaaatcagctcaaaattcgatttctaggtcgatgttttgatgtcacgctttctttactttttggcgcgtaaaaaattcatatttaatccgtccctcgtcg 53250  T
Q  599 aaaaattctaatttttt 615  Q
     ||||||||||||||||    
T  53249 gaaaattctaatttttt 53233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052; HSP #9
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 493 - 615
Target Start/End: Original strand, 3866 - 3988
Alignment:
Q  493 ctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatccg 592  Q
    |||||||||| ||| ||||||||| ||||||| ||||| ||||||||||   | |||||| | || | ||||| | ||||||||||||||||||| |||     
T  3866 ctgcaaaaaatcagctcaaaattcgatttctaggtcgatgttttgatgtcacgctttctttactttttggcgcgtaaaaaattcatatttaatccgtccc 3965  T
Q  593 ttctcgaaaaattctaatttttt 615  Q
    |  ||| ||||||||||||||||    
T  3966 tcgtcggaaaattctaatttttt 3988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 399 - 615
Target Start/End: Original strand, 18299 - 18512
Alignment:
Q  399 cgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagaccctctatattttannnnnnnnagagatgtctgcaa 498  Q
    |||||||||||| |||||||||||||||||||||| |  ||||  ||||||| |||||| |||| |||||| || |           ||| || ||||||    
T  18299 cgcgtttcggtcgaaaaatcaaaataaatcgaaacgttgtcggttttctacgcaactttgcagatcctctagatgt--atttttattgaggtgcctgcaa 18396  T
Q  499 aaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatccgttctcg 598  Q
    |||| ||| ||||||||| ||||||| ||||| ||||||||||   | |||||| | || | |||||  |||||||||||||||||||| ||| |  |||    
T  18397 aaaatcagctcaaaattcgatttctaggtcgatgttttgatgtcacgctttctttactttttggcgc-gtaaaaattcatatttaatccgtccctcgtcg 18495  T
Q  599 aaaaattctaatttttt 615  Q
     ||||||||||||||||    
T  18496 gaaaattctaatttttt 18512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 392 - 621
Target Start/End: Complemental strand, 73025 - 72798
Alignment:
Q  392 gattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagaccctctatattttannnnnnnnagagatg 491  Q
    |||||| |||||||||||| |||| ||||||||||||||||| |  ||||  |||||||||||||| |||| |||||| || |           ||| ||    
T  73025 gattttgcgcgtttcggtcgaaaattcaaaataaatcgaaaccttgtcggctttctacgaaactttgcagatcctctagatgt--atttttattgaggtg 72928  T
Q  492 tctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatcc 591  Q
     ||| |||||| ||| ||||||||| |||||||  | |  ||||||||   | ||||||||||||| | | ||| | |||||||||||||| |||| |||    
T  72927 cctgtaaaaaatcagctcaaaattcgatttctagcttggtgttttgattcctcggtttcttgagtttttgacgcgtaaaaaattcatatttgatccgtcc 72828  T
Q  592 gttctcgaaaaattctaattttttgcggga 621  Q
     |  ||| ||||||||||||||||||||||    
T  72827 ctcgtcggaaaattctaattttttgcggga 72798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052; HSP #12
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 783 - 867
Target Start/End: Original strand, 3830 - 3914
Alignment:
Q  783 tttgcagatcctctatatgtatttttatagaggtgtctgcnnnnnnncagctcaaaattcaatttttaggttgatattttgatgt 867  Q
    ||||||||||||||| |||||||||||| |||||| ||||       ||||||||||||| |||| ||||| ||| |||||||||    
T  3830 tttgcagatcctctagatgtatttttattgaggtgcctgcaaaaaatcagctcaaaattcgatttctaggtcgatgttttgatgt 3914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052; HSP #13
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 783 - 867
Target Start/End: Original strand, 18355 - 18439
Alignment:
Q  783 tttgcagatcctctatatgtatttttatagaggtgtctgcnnnnnnncagctcaaaattcaatttttaggttgatattttgatgt 867  Q
    ||||||||||||||| |||||||||||| |||||| ||||       ||||||||||||| |||| ||||| ||| |||||||||    
T  18355 tttgcagatcctctagatgtatttttattgaggtgcctgcaaaaaatcagctcaaaattcgatttctaggtcgatgttttgatgt 18439  T

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Target: scaffold0052; HSP #14
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 783 - 867
Target Start/End: Complemental strand, 30182 - 30098
Alignment:
Q  783 tttgcagatcctctatatgtatttttatagaggtgtctgcnnnnnnncagctcaaaattcaatttttaggttgatattttgatgt 867  Q
    ||||||||||||||| |||||||||||| |||||| ||||       ||||||||||||| |||| ||||| ||| |||||||||    
T  30182 tttgcagatcctctagatgtatttttattgaggtgcctgcaaaaaatcagctcaaaattcgatttctaggtcgatgttttgatgt 30098  T

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Target: scaffold0052; HSP #15
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 783 - 867
Target Start/End: Original strand, 41846 - 41930
Alignment:
Q  783 tttgcagatcctctatatgtatttttatagaggtgtctgcnnnnnnncagctcaaaattcaatttttaggttgatattttgatgt 867  Q
    ||||||||||||||| |||||||||||| |||||| ||||       ||||||||||||| |||| ||||| ||| |||||||||    
T  41846 tttgcagatcctctagatgtatttttattgaggtgcctgcaaaaaatcagctcaaaattcgatttctaggtcgatgttttgatgt 41930  T

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Target: scaffold0052; HSP #16
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 783 - 867
Target Start/End: Complemental strand, 53391 - 53307
Alignment:
Q  783 tttgcagatcctctatatgtatttttatagaggtgtctgcnnnnnnncagctcaaaattcaatttttaggttgatattttgatgt 867  Q
    ||||||||||||||| |||||||||||| |||||| ||||       ||||||||||||| |||| ||||| ||| |||||||||    
T  53391 tttgcagatcctctagatgtatttttattgaggtgcctgcaaaaaatcagctcaaaattcgatttctaggtcgatgttttgatgt 53307  T

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Target: scaffold0052; HSP #17
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 485 - 541
Target Start/End: Complemental strand, 66139 - 66083
Alignment:
Q  485 agagatgtctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgt 541  Q
    ||||||| |||||||||||||| ||||||||| ||||||| || || ||||||||||    
T  66139 agagatgcctgcaaaaaaccagctcaaaattcgatttctaggtggatgttttgatgt 66083  T

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Target: scaffold0052; HSP #18
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 485 - 541
Target Start/End: Complemental strand, 73422 - 73366
Alignment:
Q  485 agagatgtctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgt 541  Q
    ||||||| |||||||||||||| ||||||||| ||||||| || || ||||||||||    
T  73422 agagatgcctgcaaaaaaccagctcaaaattcgatttctatgtagatgttttgatgt 73366  T

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Target: scaffold0052; HSP #19
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 778 - 865
Target Start/End: Original strand, 2787 - 2874
Alignment:
Q  778 gaaaatttgcagatcctctatatgtatttttatagaggtgtctgcnnnnnnncagctcaaaattcaatttttaggttgatattttgat 865  Q
    |||| ||||||||||||||| |||||||||||| |||||| ||||       ||||||||| ||| |||| ||||| ||| |||||||    
T  2787 gaaactttgcagatcctctagatgtatttttattgaggtgcctgcaaaaaaccagctcaaagttcgatttctaggtcgatgttttgat 2874  T

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Target: scaffold0052; HSP #20
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 399 - 433
Target Start/End: Original strand, 3774 - 3808
Alignment:
Q  399 cgcgtttcggtcaaaaaatcaaaataaatcgaaac 433  Q
    |||||||||||| ||||||||||||||||||||||    
T  3774 cgcgtttcggtcgaaaaatcaaaataaatcgaaac 3808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052; HSP #21
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 778 - 865
Target Start/End: Original strand, 17323 - 17410
Alignment:
Q  778 gaaaatttgcagatcctctatatgtatttttatagaggtgtctgcnnnnnnncagctcaaaattcaatttttaggttgatattttgat 865  Q
    |||| ||||||||||||||| |||||||||||| |||||| ||||       ||||||||| ||| |||| ||||| ||| |||||||    
T  17323 gaaactttgcagatcctctagatgtatttttattgaggtgcctgcaaaaaaccagctcaaagttcgatttctaggtcgatgttttgat 17410  T

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Target: scaffold0052; HSP #22
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 399 - 469
Target Start/End: Complemental strand, 30238 - 30168
Alignment:
Q  399 cgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagaccctcta 469  Q
    |||||||||||| |||||||||||||||||||||| |  ||||  |||| || |||||| |||| ||||||    
T  30238 cgcgtttcggtcgaaaaatcaaaataaatcgaaacgttgtcggttttctgcgcaactttgcagatcctcta 30168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052; HSP #23
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 778 - 865
Target Start/End: Original strand, 40803 - 40890
Alignment:
Q  778 gaaaatttgcagatcctctatatgtatttttatagaggtgtctgcnnnnnnncagctcaaaattcaatttttaggttgatattttgat 865  Q
    |||| ||||||||||||||| |||||||||||| |||||| ||||       ||||||||| ||| |||| ||||| ||| |||||||    
T  40803 gaaactttgcagatcctctagatgtatttttattgaggtgcctgcaaaaaaccagctcaaagttcgatttctaggtcgatgttttgat 40890  T

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Target: scaffold0052; HSP #24
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 778 - 865
Target Start/End: Complemental strand, 54432 - 54345
Alignment:
Q  778 gaaaatttgcagatcctctatatgtatttttatagaggtgtctgcnnnnnnncagctcaaaattcaatttttaggttgatattttgat 865  Q
    |||| ||||||||||||||| |||||||||||| |||||| ||||       ||||||||| ||| |||| ||||| ||| |||||||    
T  54432 gaaactttgcagatcctctagatgtatttttattgaggtgcctgcaaaaaaccagctcaaagttcgatttctaggtcgatgttttgat 54345  T

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Target: scaffold0052; HSP #25
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 778 - 865
Target Start/End: Original strand, 61792 - 61879
Alignment:
Q  778 gaaaatttgcagatcctctatatgtatttttatagaggtgtctgcnnnnnnncagctcaaaattcaatttttaggttgatattttgat 865  Q
    |||| ||||||||||||||| |||||||||||| |||||| ||||       ||||||||| ||| |||| ||||| ||| |||||||    
T  61792 gaaactttgcagatcctctagatgtatttttattgaggtgcctgcaaaaaaccagctcaaagttcgatttctaggtcgatgttttgat 61879  T

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Target: scaffold0052; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 400 - 469
Target Start/End: Complemental strand, 54482 - 54413
Alignment:
Q  400 gcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagaccctcta 469  Q
    ||||||||||| |||| ||||||||||||||||| |  ||||  ||||| |||||||| |||| ||||||    
T  54482 gcgtttcggtcgaaaattcaaaataaatcgaaacgttgtcggttttctatgaaactttgcagatcctcta 54413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 532 - 621
Target Start/End: Complemental strand, 80880 - 80791
Alignment:
Q  532 gttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatccgttctcgaaaaattctaattttttgcggga 621  Q
    |||||||| ||| ||||||||||||| | | ||| | |||||| ||||||| |||| ||| |  ||| ||||||||||||||||| ||||    
T  80880 gttttgatttttcggtttcttgagtttttgacgcgtaaaaaatacatatttgatccgtccctcgtcggaaaattctaattttttgtggga 80791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 54; Significance: 2e-21; HSPs: 3)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 387 - 587
Target Start/End: Complemental strand, 47533 - 47335
Alignment:
Q  387 attatgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagaccctctatattttannnnnnnnag 486  Q
    |||| ||||||  |||||| ||||||||||||||||||||| ||   ||||||||||| ||||||||||||||||| ||||||||  |          ||    
T  47533 attaagattttgtgcgttttggtcaaaaaatcaaaataaatggaggattattcggaatgctacgaaactttacagatcctctata--tgcatttttatag 47436  T
Q  487 agatgtctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatc 586  Q
    || ||||| ||||||| ||  ||||||||| ||||||| ||| | ||||||||||||||||||||||| || | ||  | |||||| |||||||||||||    
T  47435 aggtgtctacaaaaaatcatctcaaaattcgatttctaggtcaatgttttgatgttttggtttcttgactttttggttcgttaaaagttcatatttaatc 47336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113; HSP #2
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 745 - 870
Target Start/End: Complemental strand, 47503 - 47378
Alignment:
Q  745 tcaaaataaattgaggattactcgaaatactaagaaaatttgcagatcctctatatgtatttttatagaggtgtctgcnnnnnnncagctcaaaattcaa 844  Q
    ||||||||||| |||||||| ||| ||| ||| |||| ||| ||||||||||||||| |||||||||||||||||| |       || |||||||||| |    
T  47503 tcaaaataaatggaggattattcggaatgctacgaaactttacagatcctctatatgcatttttatagaggtgtctacaaaaaatcatctcaaaattcga 47404  T
Q  845 tttttaggttgatattttgatgtttt 870  Q
    ||| |||||  || ||||||||||||    
T  47403 tttctaggtcaatgttttgatgtttt 47378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113; HSP #3
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 745 - 820
Target Start/End: Original strand, 47103 - 47178
Alignment:
Q  745 tcaaaataaattgaggattactcgaaatactaagaaaatttgcagatcctctatatgtatttttatagaggtgtct 820  Q
    |||||||||||||||| ||| ||| ||| ||| | |||||| ||||||||| | || |||||||||||||||||||    
T  47103 tcaaaataaattgaggcttattcggaatgctatggaaatttacagatcctcaacatatatttttatagaggtgtct 47178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 54; Significance: 2e-21; HSPs: 10)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 392 - 621
Target Start/End: Complemental strand, 50192 - 49965
Alignment:
Q  392 gattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagaccctctatattttannnnnnnnagagatg 491  Q
    |||||| |||||||||||| |||||||||||||||||||||| |  ||||  |||||||||||||| |||| |||||| || | |         ||| ||    
T  50192 gattttgcgcgtttcggtcgaaaaatcaaaataaatcgaaacgttgtcggttttctacgaaactttgcagatcctctagatgtaattttatt--gaggtg 50095  T
Q  492 tctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatcc 591  Q
     |||||||||| ||| ||||||||| ||||||| || || ||||||||||   | |||||| | || | ||||| | ||||||||||||||||||| |||    
T  50094 cctgcaaaaaatcagctcaaaattcgatttctaggtagatgttttgatgtcacgctttctttactttttggcgcgtaaaaaattcatatttaatccgtcc 49995  T
Q  592 gttctcgaaaaattctaattttttgcggga 621  Q
     |  ||| ||||||||||||||||| ||||    
T  49994 ctcgtcggaaaattctaattttttgtggga 49965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 388 - 621
Target Start/End: Complemental strand, 39191 - 38960
Alignment:
Q  388 ttatgattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagaccctctatattttannnnnnnnaga 487  Q
    |||||||| | |||||||||||| |||||||||||||||||||||| |  ||||  |||||||||||||| |||| |||||| || |           ||    
T  39191 ttatgattatgcgcgtttcggtcgaaaaatcaaaataaatcgaaacattgtcggttttctacgaaactttgcagatcctctagatgt--atttttattga 39094  T
Q  488 gatgtctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatcc 587  Q
    | || ||| |||||| ||||||||||||| ||||||| || || ||||||||||   | |||||| | || | |||||   |||||||||||||||||||    
T  39093 ggtgcctgtaaaaaatcagatcaaaattcgatttctaggttgatgttttgatgtcacgctttctttactttttggcgcggaaaaaattcatatttaatcc 38994  T
Q  588 atccgttctcgaaaaattctaattttttgcggga 621  Q
    || | |  ||| ||||||||||||||||| ||||    
T  38993 attcctcgtcggaaaattctaattttttgtggga 38960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 399 - 615
Target Start/End: Complemental strand, 49118 - 48904
Alignment:
Q  399 cgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagaccctctatattttannnnnnnnagagatgtctgcaa 498  Q
    |||||||||||| |||||||||||||||||||||| |  ||||  ||||||| |||||| |||| |||||| || |           ||| || ||||||    
T  49118 cgcgtttcggtcgaaaaatcaaaataaatcgaaacgttgtcggttttctacgcaactttgcagatcctctagatgt--atttttattgaggtgcctgcaa 49021  T
Q  499 aaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatccgttctcg 598  Q
    |||| ||| ||||||||| ||||||| ||||| ||||||||||   | |||||| | || | ||||| | ||||||||||||||||||| ||| |  |||    
T  49020 aaaatcagctcaaaattcgatttctaggtcgatgttttgatgtcacgctttctttactttttggcgcgtaaaaaattcatatttaatccgtccctcgtcg 48921  T
Q  599 aaaaattctaatttttt 615  Q
     ||||||||||||||||    
T  48920 gaaaattctaatttttt 48904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 392 - 469
Target Start/End: Complemental strand, 95723 - 95646
Alignment:
Q  392 gattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagaccctcta 469  Q
    |||||| |||||||||||| ||||||||||||||||||||||||  ||||  |||||||||||| | |||| ||||||    
T  95723 gattttgcgcgtttcggtcgaaaaatcaaaataaatcgaaactttgtcggttttctacgaaactatgcagatcctcta 95646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 392 - 621
Target Start/End: Complemental strand, 51333 - 51106
Alignment:
Q  392 gattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaactttacagaccctctatattttannnnnnnnagagatg 491  Q
    |||||| |||||||||||| |||| ||||||||||||||||| |  ||||  |||||||||||||| |||| |||||| || |           ||| ||    
T  51333 gattttgcgcgtttcggtcgaaaattcaaaataaatcgaaaccttgtcggctttctacgaaactttgcagatcctctagatgt--atttttattgaggtg 51236  T
Q  492 tctgcaaaaaaccagatcaaaattcaatttctaagtcgacgttttgatgttttggtttcttgagttatcggcgcattaaaaattcatatttaatccatcc 591  Q
     ||| |||||| ||| ||||||||| |||||||  | |  ||||||||   | ||||||||||||| | | ||| | |||||||||||||| |||| |||    
T  51235 cctgtaaaaaatcagctcaaaattcgatttctagcttggtgttttgattcctcggtttcttgagtttttgacgcgtaaaaaattcatatttgatccgtcc 51136  T
Q  592 gttctcgaaaaattctaattttttgcggga 621  Q
     |  ||| ||||||||||||||||||||||    
T  51135 ctcgtcggaaaattctaattttttgcggga 51106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #6
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 783 - 867
Target Start/End: Complemental strand, 49062 - 48978
Alignment:
Q  783 tttgcagatcctctatatgtatttttatagaggtgtctgcnnnnnnncagctcaaaattcaatttttaggttgatattttgatgt 867  Q
    ||||||||||||||| |||||||||||| |||||| ||||       ||||||||||||| |||| ||||| ||| |||||||||    
T  49062 tttgcagatcctctagatgtatttttattgaggtgcctgcaaaaaatcagctcaaaattcgatttctaggtcgatgttttgatgt 48978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #7
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 778 - 867
Target Start/End: Complemental strand, 50134 - 50045
Alignment:
Q  778 gaaaatttgcagatcctctatatgtatttttatagaggtgtctgcnnnnnnncagctcaaaattcaatttttaggttgatattttgatgt 867  Q
    |||| ||||||||||||||| ||||| |||||| |||||| ||||       ||||||||||||| |||| ||||| ||| |||||||||    
T  50134 gaaactttgcagatcctctagatgtaattttattgaggtgcctgcaaaaaatcagctcaaaattcgatttctaggtagatgttttgatgt 50045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 392 - 457
Target Start/End: Complemental strand, 40653 - 40588
Alignment:
Q  392 gattttacgcgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaattctacgaaacttt 457  Q
    |||||| ||||||||| || |||| ||||||||||||||||| |  ||||  ||||||||||||||    
T  40653 gattttgcgcgtttcgatcgaaaattcaaaataaatcgaaacgttgtcggttttctacgaaacttt 40588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 614
Target Start/End: Complemental strand, 95548 - 95503
Alignment:
Q  569 aaaaattcatatttaatccatccgttctcgaaaaattctaattttt 614  Q
    ||||||||||||||||||| ||| || ||| |||||||||||||||    
T  95548 aaaaattcatatttaatccgtcccttgtcggaaaattctaattttt 95503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 785 - 867
Target Start/End: Complemental strand, 95658 - 95576
Alignment:
Q  785 tgcagatcctctatatgtatttttatagaggtgtctgcnnnnnnncagctcaaaattcaatttttaggttgatattttgatgt 867  Q
    ||||||||||||| |||||||||||| |||||| ||||       ||||||||||||| |||| |||| || | |||||||||    
T  95658 tgcagatcctctagatgtatttttattgaggtgcctgcaaaaaatcagctcaaaattcgatttctaggatggtgttttgatgt 95576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0495 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 768 - 813
Target Start/End: Original strand, 8675 - 8720
Alignment:
Q  768 gaaatactaagaaaatttgcagatcctctatatgtatttttataga 813  Q
    ||||||||| |||| |||||||||||| ||||||||||| ||||||    
T  8675 gaaatactatgaaattttgcagatcctttatatgtatttctataga 8720  T

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