View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16874_low_3 (Length: 308)
Name: NF16874_low_3
Description: NF16874
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16874_low_3 |
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Alignment Details
Target: chr8 (Bit Score: 268; Significance: 1e-149; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 19 - 298
Target Start/End: Original strand, 34426717 - 34426996
Alignment:
| Q |
19 |
ccaagttctttttatctgtgactatgtatgagagtggcaaaagactcaaatctatgctattaagaatctgaaaatatctaaactaataatcgagtctgag |
118 |
Q |
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| T |
34426717 |
ccaagttctttttatctgtgactatgtatgagagtggcaaaagactcaaatctatgctattaagaatctgaaaatatctaaactaataatcgagtctgag |
34426816 |
T |
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| Q |
119 |
accattggtcaagtcaagaaaggattatctaaaaagctacaatatttaaggttgaggcaacatcaaatttcatgctgttcatttgcattgtcaatcacat |
218 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34426817 |
accattggtcaagtcaagaaaggattatctaacaagctacaatatttaaggttgaggcaacatcaaatttcatgctgttcatttgcattgtcaatcacat |
34426916 |
T |
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| Q |
219 |
aaagggcacaggatgtttgacatcaggagtacaaagttaatcaagatatgagataatatttcatagtttatacctctctg |
298 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
34426917 |
aaagggcacaggatgtttgacatcagtagtacaaagttaatcaagatatgagataataattcatagtttatacctctctg |
34426996 |
T |
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