View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1687_high_28 (Length: 408)

Name: NF1687_high_28
Description: NF1687
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1687_high_28
NF1687_high_28
[»] chr1 (30 HSPs)
chr1 (1-364)||(50444633-50444996)
chr1 (7-182)||(15072730-15072906)
chr1 (1-182)||(27814292-27814474)
chr1 (19-182)||(45584960-45585125)
chr1 (71-182)||(46111493-46111604)
chr1 (48-167)||(52628855-52628974)
chr1 (1-185)||(35943381-35943566)
chr1 (19-182)||(14470856-14471019)
chr1 (78-182)||(34351968-34352072)
chr1 (73-182)||(52627515-52627625)
chr1 (71-156)||(44278354-44278439)
chr1 (70-182)||(15071342-15071454)
chr1 (71-182)||(14477796-14477907)
chr1 (71-182)||(24499660-24499771)
chr1 (5-156)||(49802834-49802985)
chr1 (1-127)||(46110337-46110463)
chr1 (72-178)||(50442628-50442734)
chr1 (1-156)||(16963860-16964015)
chr1 (22-182)||(41872576-41872736)
chr1 (71-182)||(16123287-16123398)
chr1 (71-182)||(23091351-23091462)
chr1 (73-168)||(51042350-51042444)
chr1 (19-156)||(16965078-16965217)
chr1 (19-182)||(41873924-41874087)
chr1 (71-156)||(15234046-15234131)
chr1 (71-156)||(44276148-44276233)
chr1 (71-156)||(46467172-46467257)
chr1 (350-393)||(42841674-42841717)
chr1 (118-182)||(33369247-33369311)
chr1 (89-181)||(35942238-35942330)
[»] chr3 (39 HSPs)
chr3 (26-182)||(18197147-18197303)
chr3 (19-182)||(38242468-38242632)
chr3 (1-182)||(40244187-40244367)
chr3 (24-182)||(34818086-34818243)
chr3 (1-182)||(53624296-53624477)
chr3 (75-182)||(12107992-12108099)
chr3 (19-156)||(3208510-3208648)
chr3 (33-182)||(53194837-53194986)
chr3 (1-182)||(38240906-38241086)
chr3 (52-168)||(50810819-50810936)
chr3 (52-168)||(50864928-50865045)
chr3 (72-182)||(37735306-37735416)
chr3 (117-182)||(3209982-3210047)
chr3 (52-168)||(50809435-50809552)
chr3 (52-168)||(50866310-50866427)
chr3 (71-156)||(53420342-53420427)
chr3 (74-182)||(37736089-37736197)
chr3 (71-182)||(53421766-53421877)
chr3 (29-184)||(18442250-18442401)
chr3 (72-181)||(18458663-18458772)
chr3 (29-184)||(19487324-19487475)
chr3 (69-181)||(41544663-41544775)
chr3 (72-182)||(36176512-36176623)
chr3 (71-182)||(40364319-40364430)
chr3 (72-181)||(23443463-23443572)
chr3 (92-182)||(34819310-34819400)
chr3 (48-182)||(53187559-53187692)
chr3 (19-156)||(41263664-41263800)
chr3 (19-144)||(53622700-53622827)
chr3 (19-146)||(10730921-10731047)
chr3 (119-182)||(12105290-12105353)
chr3 (71-127)||(12106629-12106685)
chr3 (117-159)||(8796364-8796406)
chr3 (71-128)||(36175317-36175374)
chr3 (19-156)||(3455577-3455715)
chr3 (1-156)||(35372094-35372248)
chr3 (19-146)||(53614225-53614353)
chr3 (1-157)||(40745401-40745557)
chr3 (130-174)||(10301882-10301926)
[»] chr5 (27 HSPs)
chr5 (1-182)||(325120-325301)
chr5 (19-182)||(22047732-22047897)
chr5 (19-184)||(27705268-27705434)
chr5 (19-182)||(30859123-30859288)
chr5 (19-182)||(39603853-39604018)
chr5 (19-182)||(30857800-30857962)
chr5 (71-181)||(39605474-39605584)
chr5 (71-159)||(22049141-22049229)
chr5 (1-156)||(30912097-30912252)
chr5 (75-182)||(15941274-15941380)
chr5 (22-168)||(8521269-8521414)
chr5 (19-168)||(22308752-22308901)
chr5 (19-168)||(1010318-1010466)
chr5 (101-170)||(24509071-24509140)
chr5 (101-168)||(24503198-24503265)
chr5 (123-182)||(41798004-41798063)
chr5 (71-187)||(15548235-15548348)
chr5 (29-168)||(32757839-32757978)
chr5 (71-182)||(34894149-34894260)
chr5 (117-159)||(11262279-11262321)
chr5 (1-111)||(324109-324221)
chr5 (117-156)||(9169612-9169651)
chr5 (118-156)||(20538079-20538117)
chr5 (132-181)||(324068-324117)
chr5 (99-168)||(32759081-32759150)
chr5 (101-182)||(34898986-34899067)
chr5 (19-156)||(8523698-8523836)
[»] scaffold0031 (2 HSPs)
scaffold0031 (1-182)||(125165-125349)
scaffold0031 (19-182)||(123969-124131)
[»] chr4 (53 HSPs)
chr4 (1-182)||(6348155-6348336)
chr4 (1-182)||(1587182-1587364)
chr4 (72-182)||(37882834-37882944)
chr4 (1-182)||(1794411-1794595)
chr4 (19-180)||(6349504-6349667)
chr4 (1-182)||(393572-393754)
chr4 (1-182)||(1829753-1829935)
chr4 (71-182)||(1831268-1831379)
chr4 (29-182)||(1188843-1188996)
chr4 (48-182)||(37884259-37884393)
chr4 (73-182)||(24426339-24426448)
chr4 (19-196)||(52239863-52240041)
chr4 (71-188)||(390211-390328)
chr4 (53-182)||(2310923-2311052)
chr4 (1-183)||(42810137-42810320)
chr4 (19-182)||(2312433-2312598)
chr4 (87-181)||(27850953-27851047)
chr4 (29-182)||(44503642-44503794)
chr4 (58-182)||(4128993-4129117)
chr4 (71-182)||(42871095-42871206)
chr4 (4-159)||(52963592-52963747)
chr4 (1-182)||(40792751-40792930)
chr4 (75-181)||(42872308-42872414)
chr4 (73-182)||(11968511-11968620)
chr4 (70-182)||(53205487-53205599)
chr4 (73-168)||(1588096-1588191)
chr4 (72-182)||(44501518-44501628)
chr4 (71-192)||(1190197-1190318)
chr4 (48-184)||(27847676-27847812)
chr4 (48-156)||(52241137-52241245)
chr4 (71-182)||(31968397-31968508)
chr4 (1-156)||(10168716-10168873)
chr4 (71-184)||(31965833-31965946)
chr4 (71-156)||(10167451-10167536)
chr4 (1-156)||(23203888-23204043)
chr4 (71-182)||(4871369-4871480)
chr4 (19-195)||(15450027-15450204)
chr4 (73-158)||(49342643-49342728)
chr4 (19-156)||(7707614-7707753)
chr4 (52-159)||(54485530-54485638)
chr4 (72-182)||(49344015-49344126)
chr4 (19-165)||(53432079-53432225)
chr4 (1-146)||(7708723-7708868)
chr4 (29-154)||(33232662-33232785)
chr4 (99-168)||(669678-669747)
chr4 (55-156)||(23201872-23201973)
chr4 (71-144)||(50546944-50547017)
chr4 (25-156)||(33231415-33231547)
chr4 (7-165)||(53435693-53435852)
chr4 (52-158)||(54484336-54484444)
chr4 (29-146)||(50548188-50548303)
chr4 (19-148)||(40723262-40723390)
chr4 (1-156)||(13533195-13533350)
[»] chr2 (33 HSPs)
chr2 (1-182)||(28562744-28562925)
chr2 (19-182)||(11317320-11317484)
chr2 (72-181)||(43034477-43034586)
chr2 (19-182)||(43033082-43033244)
chr2 (19-182)||(32469148-32469313)
chr2 (1-182)||(17460619-17460800)
chr2 (73-184)||(28561366-28561477)
chr2 (1-182)||(11315933-11316114)
chr2 (1-182)||(32470510-32470691)
chr2 (71-181)||(42641866-42641975)
chr2 (87-182)||(7437782-7437877)
chr2 (71-180)||(7436469-7436577)
chr2 (19-182)||(6030422-6030586)
chr2 (73-182)||(17459253-17459362)
chr2 (19-191)||(11547650-11547824)
chr2 (19-156)||(29219411-29219550)
chr2 (19-156)||(29332710-29332849)
chr2 (1-156)||(1083014-1083169)
chr2 (90-166)||(12359703-12359779)
chr2 (72-182)||(36011648-36011757)
chr2 (99-168)||(2277502-2277571)
chr2 (71-156)||(6030631-6030716)
chr2 (71-156)||(44191162-44191247)
chr2 (31-156)||(18616969-18617096)
chr2 (90-181)||(36010578-36010669)
chr2 (29-168)||(34147150-34147289)
chr2 (118-156)||(29220928-29220966)
chr2 (118-156)||(29334227-29334265)
chr2 (118-168)||(37956963-37957013)
chr2 (263-317)||(41099465-41099519)
chr2 (99-168)||(2276295-2276364)
chr2 (99-168)||(34148393-34148462)
chr2 (130-170)||(23233760-23233800)
[»] chr8 (44 HSPs)
chr8 (19-182)||(32798484-32798648)
chr8 (24-182)||(44076319-44076479)
chr8 (19-182)||(42872143-42872305)
chr8 (71-182)||(26696532-26696643)
chr8 (52-168)||(28420159-28420276)
chr8 (1-181)||(41629709-41629889)
chr8 (1-182)||(32693830-32694011)
chr8 (19-167)||(22551022-22551169)
chr8 (34-182)||(4810469-4810619)
chr8 (22-182)||(32695229-32695391)
chr8 (71-182)||(41630129-41630240)
chr8 (1-187)||(42870808-42870997)
chr8 (19-182)||(45281141-45281304)
chr8 (52-168)||(28418820-28418937)
chr8 (3-159)||(45279703-45279859)
chr8 (72-159)||(6397806-6397893)
chr8 (29-146)||(26697796-26697912)
chr8 (73-182)||(30786676-30786785)
chr8 (1-156)||(42100041-42100196)
chr8 (71-182)||(8570118-8570229)
chr8 (87-182)||(32797138-32797233)
chr8 (70-142)||(29103527-29103599)
chr8 (71-182)||(30787605-30787716)
chr8 (72-182)||(212718-212828)
chr8 (72-182)||(239426-239536)
chr8 (72-182)||(726341-726451)
chr8 (72-182)||(792781-792891)
chr8 (72-182)||(798842-798952)
chr8 (24-156)||(8571574-8571707)
chr8 (87-182)||(13197962-13198057)
chr8 (72-151)||(29104371-29104450)
chr8 (72-181)||(6398503-6398613)
chr8 (137-182)||(12850466-12850511)
chr8 (1-156)||(13116356-13116511)
chr8 (71-165)||(211612-211706)
chr8 (71-165)||(240550-240644)
chr8 (71-165)||(725235-725329)
chr8 (71-165)||(793905-793999)
chr8 (48-156)||(17339531-17339639)
chr8 (99-182)||(17702308-17702391)
chr8 (71-156)||(45437487-45437572)
chr8 (19-66)||(9854832-9854879)
chr8 (19-65)||(24192616-24192661)
chr8 (72-156)||(17338067-17338151)
[»] chr7 (35 HSPs)
chr7 (3-182)||(32256332-32256511)
chr7 (1-182)||(47454337-47454518)
chr7 (2-182)||(6173387-6173566)
chr7 (71-182)||(33096869-33096980)
chr7 (72-182)||(47456381-47456491)
chr7 (19-168)||(32255003-32255154)
chr7 (19-181)||(43460775-43460938)
chr7 (72-175)||(30333292-30333395)
chr7 (20-182)||(47059108-47059271)
chr7 (1-168)||(41079770-41079936)
chr7 (71-182)||(30310121-30310232)
chr7 (72-182)||(45455378-45455488)
chr7 (19-190)||(40509687-40509858)
chr7 (71-182)||(40508378-40508489)
chr7 (1-182)||(43459455-43459636)
chr7 (22-156)||(30334597-30334727)
chr7 (72-182)||(32602933-32603043)
chr7 (87-190)||(22115185-22115289)
chr7 (72-182)||(4300054-4300164)
chr7 (72-181)||(46835676-46835785)
chr7 (1-156)||(40812548-40812703)
chr7 (71-182)||(45454038-45454149)
chr7 (93-182)||(30311496-30311585)
chr7 (1-182)||(47060410-47060591)
chr7 (72-158)||(11344531-11344614)
chr7 (1-156)||(11501206-11501361)
chr7 (19-146)||(13564191-13564319)
chr7 (128-182)||(40811340-40811394)
chr7 (48-156)||(22538830-22538938)
chr7 (87-182)||(33779105-33779200)
chr7 (72-182)||(4298713-4298823)
chr7 (24-168)||(41078770-41078915)
chr7 (24-96)||(22337330-22337401)
chr7 (71-159)||(3414839-3414927)
chr7 (1-156)||(9662171-9662326)
[»] scaffold0034 (2 HSPs)
scaffold0034 (1-182)||(109680-109861)
scaffold0034 (71-182)||(108513-108624)
[»] scaffold0077 (2 HSPs)
scaffold0077 (19-182)||(54136-54301)
scaffold0077 (24-178)||(52596-52749)
[»] chr6 (23 HSPs)
chr6 (71-182)||(6452516-6452627)
chr6 (87-182)||(34023886-34023981)
chr6 (75-162)||(34024073-34024160)
chr6 (52-168)||(232190-232305)
chr6 (19-182)||(7311677-7311840)
chr6 (1-146)||(23397289-23397434)
chr6 (73-182)||(15730036-15730146)
chr6 (71-159)||(6452307-6452395)
chr6 (1-156)||(5186594-5186748)
chr6 (1-146)||(29380227-29380372)
chr6 (72-184)||(27967055-27967167)
chr6 (90-184)||(27082168-27082263)
chr6 (1-146)||(17839074-17839219)
chr6 (52-168)||(233554-233666)
chr6 (19-159)||(12669746-12669886)
chr6 (72-181)||(27080925-27081034)
chr6 (19-156)||(29381682-29381820)
chr6 (24-182)||(7310276-7310433)
chr6 (72-156)||(6701406-6701490)
chr6 (48-156)||(6702853-6702960)
chr6 (118-156)||(2687976-2688014)
chr6 (19-146)||(17837652-17837780)
chr6 (118-156)||(18346802-18346840)
[»] scaffold1152 (1 HSPs)
scaffold1152 (1-168)||(2410-2577)
[»] scaffold0118 (1 HSPs)
scaffold0118 (19-175)||(43526-43684)
[»] scaffold0201 (1 HSPs)
scaffold0201 (72-182)||(21127-21237)
[»] scaffold0078 (1 HSPs)
scaffold0078 (71-181)||(18813-18923)
[»] scaffold1251 (1 HSPs)
scaffold1251 (99-168)||(1118-1187)
[»] scaffold0011 (1 HSPs)
scaffold0011 (19-156)||(127459-127596)
[»] scaffold0019 (1 HSPs)
scaffold0019 (72-168)||(61865-61961)


Alignment Details
Target: chr1 (Bit Score: 328; Significance: 0; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 328; E-Value: 0
Query Start/End: Original strand, 1 - 364
Target Start/End: Original strand, 50444633 - 50444996
Alignment:
Q  1 aataaggtctacgatggacactcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatg 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  50444633 aataaggtctacgatggacactcttaaggttggtccaacatagacgttttggagttaaagttaacggtttggatttatttggcaatcggaggaaaaaatg 50444732  T
Q  101 agggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataagtcatttatttattatgtg 200  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  50444733 agggaccaaaatgtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataagccatttatttattatgtg 50444832  T
Q  201 cttgtgagcttgtctatgtggttgaaattatagcaaaatgtccttaaatatcaacttcaacagaaaattgttcttcccacatcaaaaattgctatgacac 300  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  50444833 cttgtgagcttgtctatgttgttgaaattatagcaaaatgtccttaaatatcaacttcaacagaaaattgttcttcccacttcaaaaattgttatgacac 50444932  T
Q  301 acctggaaattacacatcataaccccaacgacagctaactgcagttgggtagcaaactgcaatt 364  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  50444933 acctggaaattacacatcataaccccaacgacagctaactgcagttgggtagtaaactgcaatt 50444996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 7 - 182
Target Start/End: Original strand, 15072730 - 15072906
Alignment:
Q  7 gtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaac-gatttggatttatttgacaatcggaggaaaaaatgaggg 104  Q
    ||||||| ||||| |||||| ||||||||||||||||||| |||  | |||||||||||| ||  |||||||||||| ||| ||||||||||||| ||||    
T  15072730 gtctacggtggaccactctttaggttggtccaccatagacatttgag-gttaaagttaacagacatggatttatttggcaaacggaggaaaaaataaggg 15072828  T
Q  105 accaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 182  Q
    ||||||| ||||||||||||||||||||||| |||||||||| ||||||||| ||   ||||||||||||||||||||    
T  15072829 accaaaatgtacgttttattaattgtgggaccaaaatgaaaacttgaaattaattagaggaccattgaatcaaataag 15072906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 27814474 - 27814292
Alignment:
Q  1 aataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaa-gttaacgatttggatttatttgacaatcggaggaaaaaa 98  Q
    |||||||| |||||||||| ||| |||| ||||||||||||||||| ||| | ||||||| ||||||  |  ||||||||||| ||| | ||||||||||    
T  27814474 aataaggtttacgatggaccacttttaaagttggtccaccatagacatttag-agttaaaagttaaccgtcgggatttatttggcaaacagaggaaaaaa 27814376  T
Q  99 tgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 182  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||  |||| | ||||||||    
T  27814375 tgagggaccaaaaggtacgttttattaattataggactaaaatgaaaacttgaaattatttgagggatgattggaacaaataag 27814292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 45584960 - 45585125
Alignment:
Q  19 cactcttaaggttggtccaccatagacgt--tttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtac 116  Q
    ||||||||| ||||| ||||||||||| |  |||||  ||||| |||||| |  ||||||||||| ||| ||||||||||| ||| ||||||||||||||    
T  45584960 cactcttaaagttgggccaccatagacatcatttgggtttaaacttaacggtcaggatttatttggcaaacggaggaaaaagtgaaggaccaaaaggtac 45585059  T
Q  117 gttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 182  Q
    ||||||||||||||| ||| |||||||||| ||||||||||||||||||| |||| ||||||||||    
T  45585060 gttttattaattgtgagaccaaaatgaaaacttgaaattatttgagggactattggatcaaataag 45585125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 71 - 182
Target Start/End: Original strand, 46111493 - 46111604
Alignment:
Q  71 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccatt 170  Q
    ||||||||||| ||| || |||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||| |||||||||||| ||||||||||    
T  46111493 ggatttatttggcaaacgaaggaaaaaatgaggaaccaaaaggtacgttttattaattgtgggaccaaaataaaaacttgaaattatttaagggaccatt 46111592  T
Q  171 gaatcaaataag 182  Q
    ||||||||||||    
T  46111593 gaatcaaataag 46111604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 48 - 167
Target Start/End: Original strand, 52628855 - 52628974
Alignment:
Q  48 tttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaat 147  Q
    ||||| |||||| |||||| ||  |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||     
T  52628855 tttggggttaaacttaacggttgagatttatttggcaaacggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggaccaaaattaaaac 52628954  T
Q  148 ttgaaattatttgagggacc 167  Q
    |||||||||||| |||||||    
T  52628955 ttgaaattatttaagggacc 52628974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 35943381 - 35943566
Alignment:
Q  1 aataaggtctacgatgga-cactcttaaggttggtccaccatagacgttttggagttaaagttaacgatttgg--atttatttgacaatcggaggaaaaa 97  Q
    ||||||||||| | |||| ||||||||||||||||||||||||||| ||| || |||||| |||||     ||  ||||||||| ||| || ||||||||    
T  35943381 aataaggtctatggtggatcactcttaaggttggtccaccatagacatttagg-gttaaacttaacagccaggggatttatttggcaaacgaaggaaaaa 35943479  T
Q  98 atgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataagtca 185  Q
     ||||| ||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||| || ||||||| ||||||||||||||    
T  35943480 gtgagg-accaaaatgtacgttttattaattgtgggaccaaaataaaaatttgaaattatttaagagaccattaaatcaaataagtca 35943566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 14471019 - 14470856
Alignment:
Q  19 cactcttaaggttggtccaccatagacgttttggagttaaagttaac---gatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggta 115  Q
    |||||||||||||||||||| |||||||||| || |||||| |||||   ||   ||||||||||| ||| || |||||||| ||||||||  ||  |||    
T  14471019 cactcttaaggttggtccactatagacgtttggg-gttaaacttaacaccgaa--ggatttatttggcaaacgaaggaaaaagtgagggacttaaccgta 14470923  T
Q  116 cgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 182  Q
    |||||||||||||||||||| |||||||||| ||||||||||||  |||||||||| ||||||||||    
T  14470922 cgttttattaattgtgggaccaaaatgaaaacttgaaattatttaggggaccattggatcaaataag 14470856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 78 - 182
Target Start/End: Original strand, 34351968 - 34352072
Alignment:
Q  78 tttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaa 177  Q
    |||||||| || |||||||| |||||||||||||||||| |||||||||||||||||| |||||||||| || ||||||||| |||||| |||| |||||    
T  34351968 tttgacaaacgtaggaaaaagtgagggaccaaaaggtacattttattaattgtgggaccaaaatgaaaacttaaaattatttaagggactattggatcaa 34352067  T
Q  178 ataag 182  Q
    |||||    
T  34352068 ataag 34352072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 73 - 182
Target Start/End: Complemental strand, 52627625 - 52627515
Alignment:
Q  73 atttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgtttt-attaattgtgggactaaaatgaaaatttgaaattatttgagggaccattg 171  Q
    |||| |||| ||| ||||||||||| | | || |||||| ||| ||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  52627625 atttttttggcaaacggaggaaaaattaaaggtccaaaatgtatgtttttattaattgtgggaccaaaatgaaaacttgaaattatttgagggaccattg 52627526  T
Q  172 aatcaaataag 182  Q
     ||||||||||    
T  52627525 gatcaaataag 52627515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 71 - 156
Target Start/End: Original strand, 44278354 - 44278439
Alignment:
Q  71 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaatta 156  Q
    |||| |||||| ||| ||||| ||||||||||||||||||| ||||||||||||||| ||||||| |||||||||| |||||||||    
T  44278354 ggatctatttggcaaacggagaaaaaaatgagggaccaaaacgtacgttttattaatcgtgggaccaaaatgaaaacttgaaatta 44278439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 70 - 182
Target Start/End: Complemental strand, 15071454 - 15071342
Alignment:
Q  70 tggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccat 169  Q
    ||||||||||||  || ||||||||||| |||||||||||||  ||||||||||||||| || ||| |||||||||| ||||||||||||  |||||||     
T  15071454 tggatttatttggtaaacggaggaaaaagtgagggaccaaaacatacgttttattaattatgtgaccaaaatgaaaacttgaaattatttaggggaccaa 15071355  T
Q  170 tgaatcaaataag 182  Q
    || || |||||||    
T  15071354 tggattaaataag 15071342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 71 - 182
Target Start/End: Original strand, 14477796 - 14477907
Alignment:
Q  71 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccatt 170  Q
    ||||||||||| ||| ||||| ||||| ||||||||  ||| ||||||||||||||||||||||  ||| |||||| || |||||||||  |||||||||    
T  14477796 ggatttatttggcaaacggagaaaaaagtgagggacttaaacgtacgttttattaattgtgggatcaaagtgaaaacttaaaattatttatgggaccatt 14477895  T
Q  171 gaatcaaataag 182  Q
    | ||||||||||    
T  14477896 ggatcaaataag 14477907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 71 - 182
Target Start/End: Original strand, 24499660 - 24499771
Alignment:
Q  71 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccatt 170  Q
    |||||||||||  || ||||||||||| ||||||||||||| ||  ||||||||||||||| ||| |||||||||| ||||||||||||  |||||||      
T  24499660 ggatttatttggtaaacggaggaaaaagtgagggaccaaaacgtgagttttattaattgtgagaccaaaatgaaaacttgaaattatttaggggaccaac 24499759  T
Q  171 gaatcaaataag 182  Q
     |||||||||||    
T  24499760 aaatcaaataag 24499771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 5 - 156
Target Start/End: Original strand, 49802834 - 49802985
Alignment:
Q  5 aggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagg 103  Q
    ||||||||||| ||| ||| ||||||||||| |||||||||| ||| | |||| ||||||||  |  ||||||||||| ||| ||||| |||| ||||||    
T  49802834 aggtctacgatagaccacttttaaggttggtacaccatagacatttag-agttgaagttaaccgtcgggatttatttggcaaacggagaaaaagatgagg 49802932  T
Q  104 gaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaatta 156  Q
    ||| |||| ||   |||||||||||||||||| ||||||||||  ||||||||    
T  49802933 gactaaaacgtcatttttattaattgtgggaccaaaatgaaaacatgaaatta 49802985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 46110463 - 46110337
Alignment:
Q  1 aataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaat 99  Q
    ||||||||||||||||||| |||||||||||||||||||||||||   ||| ||||||||||||||  |   |||||||||  ||| ||||| ||||  |    
T  46110463 aataaggtctacgatggaccactcttaaggttggtccaccataga-tatttagagttaaagttaacagtcgagatttatttagcaaacggagaaaaactt 46110365  T
Q  100 gagggaccaaaaggtacgttttattaat 127  Q
    ||| |||||||| |||||||||||||||    
T  46110364 gagtgaccaaaaagtacgttttattaat 46110337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 72 - 178
Target Start/End: Complemental strand, 50442734 - 50442628
Alignment:
Q  72 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattg 171  Q
    |||||||||||||| | ||||||||  ||||| | ||||| ||||||||||||||||||| ||| ||||| ||||  | |||||||||||||||| ||||    
T  50442734 gatttatttgacaaacagaggaaaaggtgaggaatcaaaatgtacgttttattaattgtgagaccaaaataaaaacataaaattatttgagggacaattg 50442635  T
Q  172 aatcaaa 178  Q
     ||||||    
T  50442634 gatcaaa 50442628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 16964015 - 16963860
Alignment:
Q  1 aataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaat 99  Q
    ||||||||||| ||||||| ||| |||||||||||||| |||| ||  ||| ||||||||||||||  |  | ||||||||| ||| |||||||||| ||    
T  16964015 aataaggtctatgatggaccacttttaaggttggtccatcataaac-atttagagttaaagttaacagtcagcatttatttggcaaacggaggaaaagat 16963917  T
Q  100 gagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaatta 156  Q
    ||||||| ||||      |||||||||||||||||| ||||||||||  ||||||||    
T  16963916 gagggactaaaacaccatttttattaattgtgggaccaaaatgaaaacatgaaatta 16963860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 22 - 182
Target Start/End: Complemental strand, 41872736 - 41872576
Alignment:
Q  22 tcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgtttt 121  Q
    ||||||| ||||| |||||||||| ||| || |||||| |||||      |||||||||| ||| ||||||||||| |||| |||  ||| |||||||||    
T  41872736 tcttaagattggttcaccatagacatttgggggttaaacttaacaccaatgatttatttggcaaacggaggaaaaagtgagagacttaaacgtacgtttt 41872637  T
Q  122 attaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 182  Q
    |||||||||  ||  |||||||||| ||||||||| |  ||||||||||  ||||||||||    
T  41872636 attaattgtatgatcaaaatgaaaagttgaaattaatcaagggaccattagatcaaataag 41872576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 71 - 182
Target Start/End: Complemental strand, 16123398 - 16123287
Alignment:
Q  71 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccatt 170  Q
    ||||||||||| ||| |||| ||||||||||||||| |||| ||   ||||||||||||||| || |||||||||| || |||||||||   ||| || |    
T  16123398 ggatttatttggcaaacggaagaaaaaatgagggactaaaacgtgaattttattaattgtggaaccaaaatgaaaactttaaattatttagaggatcaat 16123299  T
Q  171 gaatcaaataag 182  Q
    ||||||||||||    
T  16123298 gaatcaaataag 16123287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 71 - 182
Target Start/End: Complemental strand, 23091462 - 23091351
Alignment:
Q  71 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccatt 170  Q
    ||||||||||| ||| ||||| ||||| |||| |||||||| ||||||||||||||||||   || ||||||||||| |||||||| ||  ||||||| |    
T  23091462 ggatttatttggcaaacggagaaaaaagtgagtgaccaaaacgtacgttttattaattgtaaaaccaaaatgaaaatgtgaaattagttaggggaccaat 23091363  T
Q  171 gaatcaaataag 182  Q
      ||||||||||    
T  23091362 agatcaaataag 23091351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 73 - 168
Target Start/End: Original strand, 51042350 - 51042444
Alignment:
Q  73 atttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggacca 168  Q
    ||||||||| ||| ||||| |||||| ||||||| |||| ||  ||||||||||||||||||| |||||||||||| ||||||| || ||||||||    
T  51042350 atttatttggcaaacggagaaaaaaa-gagggactaaaacgtgagttttattaattgtgggaccaaaatgaaaattggaaattaattaagggacca 51042444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 19 - 156
Target Start/End: Original strand, 16965078 - 16965217
Alignment:
Q  19 cactcttaaggttggtccaccatagacgt--tttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtac 116  Q
    ||||||||| |||||||||||||| || |  ||||| |||||| ||||| ||  | |||||||||| || |||| |||||  | |||||| |||| ||      
T  16965078 cactcttaaagttggtccaccatatacatcatttggggttaaacttaaccatcggaatttatttgataaacggaagaaaatgtaagggactaaaacgtca 16965177  T
Q  117 gttttattaattgtgggactaaaatgaaaatttgaaatta 156  Q
     |||||||||||||||||| |||||||||||  |||||||    
T  16965178 tttttattaattgtgggaccaaaatgaaaataagaaatta 16965217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 41873924 - 41874087
Alignment:
Q  19 cactcttaaggttggtccaccatagacgttttggagttaaagttaacgattt-ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacg 117  Q
    ||||||||||||||||||||||||||| |||  | |||||| ||||| |    |||||||||||  || ||||||||||  | | || ||||||| |||     
T  41873924 cactcttaaggttggtccaccatagacatttgtg-gttaaacttaacaaccaaggatttatttggtaaacggaggaaaagctaaagggccaaaagatact 41874022  T
Q  118 ttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 182  Q
    ||||||||||| || ||| || ||||||| | ||||||| ||||||||||| || ||| ||||||    
T  41874023 ttttattaattatgagaccaagatgaaaaatggaaattaattgagggaccaatggatctaataag 41874087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 71 - 156
Target Start/End: Original strand, 15234046 - 15234131
Alignment:
Q  71 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaatta 156  Q
    ||||||||||| ||| ||||||||||  |||||||| |||| |    |||||||||||||||||| ||||||||||  ||||||||    
T  15234046 ggatttatttggcaaacggaggaaaatgtgagggactaaaacgccatttttattaattgtgggaccaaaatgaaaacatgaaatta 15234131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 71 - 156
Target Start/End: Complemental strand, 44276233 - 44276148
Alignment:
Q  71 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaatta 156  Q
    ||||||| ||||||| | ||| ||||| ||| ||| ||||| |||||||||||||||| || ||| |||||||||| | |||||||    
T  44276233 ggatttaattgacaaacagagaaaaaagtgaaggatcaaaacgtacgttttattaattatgagaccaaaatgaaaaatggaaatta 44276148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 71 - 156
Target Start/End: Complemental strand, 46467257 - 46467172
Alignment:
Q  71 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaatta 156  Q
    ||||||||||||||| |||||| |||  ||||||||| |||  |  ||||||||| || |||||| |||||||||| |||||||||    
T  46467257 ggatttatttgacaaacggaggcaaacctgagggaccgaaacatgagttttattagttatgggaccaaaatgaaaacttgaaatta 46467172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 350 - 393
Target Start/End: Original strand, 42841674 - 42841717
Alignment:
Q  350 tagcaaactgcaattggctaagctgcacttaagtgtagttcctg 393  Q
    |||||||||||||||| || ||||||||||||||| ||||||||    
T  42841674 tagcaaactgcaattgactcagctgcacttaagtgcagttcctg 42841717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 118 - 182
Target Start/End: Original strand, 33369247 - 33369311
Alignment:
Q  118 ttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 182  Q
    ||||||||||| |||||| |||||||| | ||||||||| ||  | |||||||| ||||||||||    
T  33369247 ttttattaattatgggaccaaaatgaatacttgaaattaattaggagaccattggatcaaataag 33369311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 89 - 181
Target Start/End: Complemental strand, 35942330 - 35942238
Alignment:
Q  89 gaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataa 181  Q
    ||||||||| |||||||| || | ||  ||||| ||||||   |||| ||||| |||||||||||||||||   |||||| ||||||||||||    
T  35942330 gaggaaaaagtgagggactaagacgtgtgttttgttaattacaggaccaaaataaaaatttgaaattatttagaggaccaatgaatcaaataa 35942238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 117; Significance: 2e-59; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 26 - 182
Target Start/End: Complemental strand, 18197303 - 18197147
Alignment:
Q  26 aaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttatta 125  Q
    ||||||||| ||||||||| ||||||||||||||||||||| | |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  18197303 aaggttggttcaccatagatgttttggagttaaagttaacggtctggatttatttggcaaacggaggaaaaaatgagggaccaaaaggtacgttttatta 18197204  T
Q  126 attgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 182  Q
    |||||||||| ||||||||||||||||||||||||||||||  ||| ||||||||||    
T  18197203 attgtgggaccaaaatgaaaatttgaaattatttgagggacatttggatcaaataag 18197147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 38242468 - 38242632
Alignment:
Q  19 cactcttaaggttggtccaccatagacgtt-ttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacg 117  Q
    ||||||||||||||||||||||||||| |  || |||||||| |||||  |  ||||||||||| ||| | ||  ||||| |||||||||||||||||||    
T  38242468 cactcttaaggttggtccaccatagacatcatttgagttaaacttaactgtgaggatttatttggcaaacagataaaaaagtgagggaccaaaaggtacg 38242567  T
Q  118 ttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 182  Q
    |||||||||||||||||  |||||||||| |||||||||||||||||||| ||||||||||||||    
T  38242568 ttttattaattgtgggatcaaaatgaaaacttgaaattatttgagggacctttgaatcaaataag 38242632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 40244367 - 40244187
Alignment:
Q  1 aataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaat 99  Q
    ||||||||||||||||||| ||| ||||| ||||||||||||||||  || | |||||||||||||  |    ||| ||||| ||| ||||||||||  |    
T  40244367 aataaggtctacgatggaccacttttaagtttggtccaccatagacactt-gaagttaaagttaactgtcaaaatt-atttggcaaacggaggaaaattt 40244270  T
Q  100 gagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 182  Q
    |||||||||||| ||||||||||||||||||| ||| |||||||||| |||||||||||| |||||||| || ||||||||||    
T  40244269 gagggaccaaaatgtacgttttattaattgtgagaccaaaatgaaaacttgaaattatttaagggaccaatggatcaaataag 40244187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 24 - 182
Target Start/End: Complemental strand, 34818243 - 34818086
Alignment:
Q  24 ttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttat 123  Q
    ||||||||| || ||||||||| |||   ||||||||||||| ||| ||||||||||| |||  |||||||||  ||||||||||||   ||||||||||    
T  34818243 ttaaggttgatcaaccatagacatttaa-agttaaagttaactattgggatttatttggcaaatggaggaaaatctgagggaccaaatcatacgttttat 34818145  T
Q  124 taattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 182  Q
    |||||||||||| |||||||||| ||||||||| ||   ||||||||||||||||||||    
T  34818144 taattgtgggaccaaaatgaaaacttgaaattaattagaggaccattgaatcaaataag 34818086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 53624296 - 53624477
Alignment:
Q  1 aataaggtctacgatggacactct-taaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaat 99  Q
    ||||||||||| | |||||  ||| ||| |||||||||||||| || ||| || ||||||  ||||  | |||||||||||| ||| | ||| ||||| |    
T  53624296 aataaggtctatggtggactatctataatgttggtccaccatatacatttggg-gttaaacctaaccgtctggatttatttggcaaaccgagaaaaaagt 53624394  T
Q  100 gagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 182  Q
    ||| |||||||| ||||||||||||||||||| ||  |||||||||| |||||||||||||||||||||||| ||||||||||    
T  53624395 gagtgaccaaaatgtacgttttattaattgtgagatcaaaatgaaaacttgaaattatttgagggaccattggatcaaataag 53624477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 75 - 182
Target Start/End: Original strand, 12107992 - 12108099
Alignment:
Q  75 ttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaat 174  Q
    ||||||| ||| ||||||||||| |||||||||||||  || ||||||||| ||||||||| |||||||||| |||||||||||| |||||| |||||||    
T  12107992 ttatttggcaaacggaggaaaaagtgagggaccaaaatatatgttttattagttgtgggaccaaaatgaaaacttgaaattatttaagggactattgaat 12108091  T
Q  175 caaataag 182  Q
    ||||||||    
T  12108092 caaataag 12108099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 19 - 156
Target Start/End: Complemental strand, 3208648 - 3208510
Alignment:
Q  19 cactcttaaggttggtccaccatag-acgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacg 117  Q
    ||||||||||||||||||||||||  |   ||||| |||||| |||||| |  ||||||||||||||| ||||||||||||| ||||| ||||| |||||    
T  3208648 cactcttaaggttggtccaccataatatcatttggggttaaacttaacggtaaggatttatttgacaaacggaggaaaaaataagggatcaaaacgtacg 3208549  T
Q  118 ttttattaattgtgggactaaaatgaaaatttgaaatta 156  Q
    ||||||||||| |||||| |||||||||| | |||||||    
T  3208548 ttttattaattatgggaccaaaatgaaaaatggaaatta 3208510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 33 - 182
Target Start/End: Original strand, 53194837 - 53194986
Alignment:
Q  33 gtccaccatagacgttttggagttaaagttaac-gatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtg 131  Q
    ||||||||||||| ||||| ||||||| ||||| ||  |||||||||||| |||   ||||||||| ||||||||||||| |||||||||||||||| ||    
T  53194837 gtccaccatagacattttg-agttaaacttaacagacatggatttatttggcaaatagaggaaaaagtgagggaccaaaacgtacgttttattaattatg 53194935  T
Q  132 ggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 182  Q
    |||| |||||||||| |||||||||||  || || |||||||| |||||||    
T  53194936 ggaccaaaatgaaaacttgaaattattcaagagatcattgaattaaataag 53194986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 38241086 - 38240906
Alignment:
Q  1 aataaggtctacgatggacactcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatg 100  Q
    |||||| ||||||||||||  | || | |||||| |||||||||| ||| ||||||||| |||||     ||||||||||| ||| ||||||||||  ||    
T  38241086 aataagctctacgatggaccatttttaagttggttcaccatagacattt-ggagttaaacttaacagccgggatttatttggcaaacggaggaaaatctg 38240988  T
Q  101 agggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 182  Q
    | ||||  ||| ||||||||||||||||||||||| ||||| ||||||||||||||||  |||||||| || ||||||||||    
T  38240987 aaggacttaaacgtacgttttattaattgtgggaccaaaataaaaatttgaaattattcaagggaccaatggatcaaataag 38240906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 52 - 168
Target Start/End: Original strand, 50810819 - 50810936
Alignment:
Q  52 gagttaaagttaacgatttg-gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttg 150  Q
    ||||||||||||||  |||| |||||||||| ||| |||||||||||||||||||| |||| ||  |||||||||||| |||||| |||||||||| |||    
T  50810819 gagttaaagttaacagtttgagatttatttggcaaacggaggaaaaaatgagggactaaaacgtgtgttttattaattatgggaccaaaatgaaaaattg 50810918  T
Q  151 aaattatttgagggacca 168  Q
    ||||||||| ||||||||    
T  50810919 aaattatttaagggacca 50810936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 52 - 168
Target Start/End: Complemental strand, 50865045 - 50864928
Alignment:
Q  52 gagttaaagttaacgatttg-gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttg 150  Q
    ||||||||||||||  |||| |||||||||| ||| |||||||||||||||||||| |||| ||  |||||||||||| |||||| |||||||||| |||    
T  50865045 gagttaaagttaacagtttgagatttatttggcaaacggaggaaaaaatgagggactaaaacgtgtgttttattaattatgggaccaaaatgaaaaattg 50864946  T
Q  151 aaattatttgagggacca 168  Q
    ||||||||| ||||||||    
T  50864945 aaattatttaagggacca 50864928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 72 - 182
Target Start/End: Complemental strand, 37735416 - 37735306
Alignment:
Q  72 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattg 171  Q
    |||||||||||||| || || |||||||||||||| ||||  ||||||||||||||| |||||| |||||||||| || ||||||||| | |||||| ||    
T  37735416 gatttatttgacaaacgaagaaaaaaatgagggactaaaacatacgttttattaattatgggaccaaaatgaaaacttaaaattatttaaaggaccaatg 37735317  T
Q  172 aatcaaataag 182  Q
     ||||||||||    
T  37735316 gatcaaataag 37735306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 117 - 182
Target Start/End: Original strand, 3209982 - 3210047
Alignment:
Q  117 gttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 182  Q
    ||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||    
T  3209982 gttttattaattgtgggaccaaaatgaaaatttaaaattatttaagggaccattgaatcaaataag 3210047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 52 - 168
Target Start/End: Complemental strand, 50809552 - 50809435
Alignment:
Q  52 gagttaaagttaacgatttg-gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttg 150  Q
    ||||||||||| ||  |||| |||||||||| ||| ||||||||||| |||||||| |||| ||  |||||||||||| |||||| |||||||||| |||    
T  50809552 gagttaaagttgacagtttgagatttatttggcaaacggaggaaaaagtgagggactaaaacgtgtgttttattaattatgggaccaaaatgaaaaattg 50809453  T
Q  151 aaattatttgagggacca 168  Q
    ||||||||| ||||||||    
T  50809452 aaattatttaagggacca 50809435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 52 - 168
Target Start/End: Original strand, 50866310 - 50866427
Alignment:
Q  52 gagttaaagttaacgatttg-gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttg 150  Q
    ||||||||||| ||  |||| |||||||||| ||| ||||||||||| |||||||| |||| ||  |||||||||||| |||||| |||||||||| |||    
T  50866310 gagttaaagttgacagtttgagatttatttggcaaacggaggaaaaagtgagggactaaaacgtgtgttttattaattatgggaccaaaatgaaaaattg 50866409  T
Q  151 aaattatttgagggacca 168  Q
    ||||||||| ||||||||    
T  50866410 aaattatttaagggacca 50866427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 71 - 156
Target Start/End: Complemental strand, 53420427 - 53420342
Alignment:
Q  71 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaatta 156  Q
    |||||||||||| || ||||| ||||| ||||||||||||| |||||||||||||||||| |||| ||||||||||| ||||||||    
T  53420427 ggatttatttgataaacggagaaaaaagtgagggaccaaaacgtacgttttattaattgtaggaccaaaatgaaaatatgaaatta 53420342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 74 - 182
Target Start/End: Original strand, 37736089 - 37736197
Alignment:
Q  74 tttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaa 173  Q
    |||||||| ||| ||||| ||||| |||||||| |||| ||||||||||||||||||| ||| ||||||||||  ||||||||||| |||||| | ||||    
T  37736089 tttatttggcaaacggagaaaaaagtgagggactaaaacgtacgttttattaattgtgagaccaaaatgaaaacatgaaattatttaagggactaatgaa 37736188  T
Q  174 tcaaataag 182  Q
    ||| |||||    
T  37736189 tcacataag 37736197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 71 - 182
Target Start/End: Original strand, 53421766 - 53421877
Alignment:
Q  71 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccatt 170  Q
    ||||||||||| ||| | ||| ||||| ||||||||||||| |||||||||||||||||| |||||||||||||||  | |||||| ||  || || |||    
T  53421766 ggatttatttggcaaacagagaaaaaagtgagggaccaaaacgtacgttttattaattgtaggactaaaatgaaaacgtaaaattaattagggaacaatt 53421865  T
Q  171 gaatcaaataag 182  Q
    ||||||||||||    
T  53421866 gaatcaaataag 53421877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 29 - 184
Target Start/End: Complemental strand, 18442401 - 18442250
Alignment:
Q  29 gttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaatt 128  Q
    ||||||||||||||||| ||| || |||||| ||||| |  || ||||||||| |||   ||||||||||||| |||| |||| ||  ||||||||||||    
T  18442401 gttggtccaccatagacatttggg-gttaaacttaacaacatgaatttatttggcaa---gaggaaaaaatgatggactaaaacgtgggttttattaatt 18442306  T
Q  129 gtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataagtc 184  Q
    ||||||| |||||||||| ||||||||||||   |||||| || ||||||| ||||    
T  18442305 gtgggaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaatcagtc 18442250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 72 - 181
Target Start/End: Original strand, 18458663 - 18458772
Alignment:
Q  72 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattg 171  Q
    |||||||||| ||| ||||||||||| |||||||| |||| | | ||||||||||||||||||| ||||| |||| ||||||||||||  ||||| | ||    
T  18458663 gatttatttggcaaacggaggaaaaagtgagggactaaaacgcaagttttattaattgtgggaccaaaataaaaacttgaaattatttaggggactaatg 18458762  T
Q  172 aatcaaataa 181  Q
     |||||||||    
T  18458763 gatcaaataa 18458772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 29 - 184
Target Start/End: Complemental strand, 19487475 - 19487324
Alignment:
Q  29 gttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaatt 128  Q
    ||||||||||||||||| ||| || |||||| ||||| |  || ||||||||| |||   ||||||||||||| |||| |||| ||  ||||||||||||    
T  19487475 gttggtccaccatagacatttggg-gttaaacttaacaacatgaatttatttggcaa---gaggaaaaaatgatggactaaaacgtgggttttattaatt 19487380  T
Q  129 gtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataagtc 184  Q
    ||||||| |||||||||| ||||||||||||   |||||| || ||||||| ||||    
T  19487379 gtgggaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaatcagtc 19487324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 69 - 181
Target Start/End: Complemental strand, 41544775 - 41544663
Alignment:
Q  69 ttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggacca 168  Q
    ||||||||||||| ||| | ||||||||| ||||||||  ||| ||||||| |||||||| | |||| |||||||||| |||||||||||| | ||||||    
T  41544775 ttggatttatttggcaaacagaggaaaaagtgagggacttaaacgtacgttatattaattataggaccaaaatgaaaacttgaaattatttaatggacca 41544676  T
Q  169 ttgaatcaaataa 181  Q
     |||||| |||||    
T  41544675 atgaatctaataa 41544663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 72 - 182
Target Start/End: Original strand, 36176512 - 36176623
Alignment:
Q  72 gatttatttgacaatcggaggaaaa-aatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccatt 170  Q
    |||||||||| ||| | |||||||| |||||||||||||||  ||| |||||||||||||||||| ||||||||||  |||||||| |   |||||||||    
T  36176512 gatttatttggcaaacagaggaaaaaaatgagggaccaaaacatacattttattaattgtgggaccaaaatgaaaacatgaaattaatcaggggaccatt 36176611  T
Q  171 gaatcaaataag 182  Q
    | ||||||||||    
T  36176612 ggatcaaataag 36176623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 71 - 182
Target Start/End: Complemental strand, 40364430 - 40364319
Alignment:
Q  71 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccatt 170  Q
    ||||||||||| ||| ||||| ||||||||||||||  ||| |||| ||||||||||| | |||| |||||||||| ||||||||||||  || ||||||    
T  40364430 ggatttatttggcaaacggagaaaaaaatgagggacttaaacgtacattttattaattttaggaccaaaatgaaaacttgaaattatttagggaaccatt 40364331  T
Q  171 gaatcaaataag 182  Q
      ||||||||||    
T  40364330 agatcaaataag 40364319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 72 - 181
Target Start/End: Original strand, 23443463 - 23443572
Alignment:
Q  72 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattg 171  Q
    |||||||||| ||| | || ||||| |||| ||||  |||||||||||||||||||| |||||| |||||||||| || |||||| || ||||| |||||    
T  23443463 gatttatttggcaaacagaagaaaagatgaaggacttaaaggtacgttttattaattttgggaccaaaatgaaaagttaaaattaattaagggatcattg 23443562  T
Q  172 aatcaaataa 181  Q
     |||||||||    
T  23443563 gatcaaataa 23443572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 92 - 182
Target Start/End: Original strand, 34819310 - 34819400
Alignment:
Q  92 gaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 182  Q
    |||||| ||| ||||  ||| |||||||||||||||||| |||  |||||||||| ||||||||||||||||||| | || ||||||||||    
T  34819310 gaaaaagtgaaggacttaaacgtacgttttattaattgtaggatcaaaatgaaaacttgaaattatttgagggactaatggatcaaataag 34819400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 48 - 182
Target Start/End: Complemental strand, 53187692 - 53187559
Alignment:
Q  48 tttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaat 147  Q
    ||||| |||||| |||||| |  ||||||||||| ||| |||| |||||| ||||||||||||   ||| |||||||||||||  ||  ||||||||||     
T  53187692 tttggggttaaacttaacggtagggatttatttggcaaacggaagaaaaagtgagggaccaaaca-tacattttattaattgtaagatcaaaatgaaaac 53187594  T
Q  148 ttgaaattatttgagggaccattgaatcaaataag 182  Q
    ||||||||||||  |||||||||  ||||||||||    
T  53187593 ttgaaattatttaggggaccattcgatcaaataag 53187559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 156
Target Start/End: Complemental strand, 41263800 - 41263664
Alignment:
Q  19 cactcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgt 118  Q
    |||| ||||||||| |||||||||||  ||| | |||||||||||||  || ||||||| ||||||| ||||| |||| |||| ||||||||| |    |    
T  41263800 cacttttaaggttgatccaccatagatatttag-agttaaagttaacacttgggatttaattgacaaacggagaaaaagatgacggaccaaaatgccatt 41263702  T
Q  119 tttattaattgtgggactaaaatgaaaatttgaaatta 156  Q
    |||| ||| |||||||| ||||||||||| ||||||||    
T  41263701 tttaataaatgtgggaccaaaatgaaaatatgaaatta 41263664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 144
Target Start/End: Complemental strand, 53622827 - 53622700
Alignment:
Q  19 cactcttaaggttggtccaccatagacgt--tttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtac 116  Q
    ||||||||||||||||||||||||||| |  ||||| |||||| |||||  || ||||||| ||| ||| ||||||||||  | ||||| |||||  ||     
T  53622827 cactcttaaggttggtccaccatagacatcatttggggttaaacttaaccgttgggatttagttggcaaacggaggaaaatctaagggatcaaaatatat 53622728  T
Q  117 gttttattaattgtgggactaaaatgaa 144  Q
     |||||||||||||| ||| ||||||||    
T  53622727 tttttattaattgtgcgaccaaaatgaa 53622700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 146
Target Start/End: Complemental strand, 10731047 - 10730921
Alignment:
Q  19 cactcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgt 118  Q
    |||| ||||||||||| |||||||||| ||| | |||||||||||||  |  ||||||||||| ||| ||||| ||||| ||| ||||||||| |    |    
T  10731047 cacttttaaggttggttcaccatagacattt-gaagttaaagttaacagtcgggatttatttggcaaacggagaaaaaagtgaaggaccaaaatgccatt 10730949  T
Q  119 tttattaattgtgggactaaaatgaaaa 146  Q
    |||||||||| |||||| ||||||||||    
T  10730948 tttattaattatgggaccaaaatgaaaa 10730921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 119 - 182
Target Start/End: Complemental strand, 12105353 - 12105290
Alignment:
Q  119 tttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 182  Q
    ||||||||||||||| | || ||||||| |||||||||||||||| |||||||||| |||||||    
T  12105353 tttattaattgtggggccaatatgaaaacttgaaattatttgaggaaccattgaattaaataag 12105290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 71 - 127
Target Start/End: Complemental strand, 12106685 - 12106629
Alignment:
Q  71 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaat 127  Q
    |||||||||||| || ||||| ||||| ||||||||||||| |||||||||||||||    
T  12106685 ggatttatttgataaacggagaaaaaagtgagggaccaaaatgtacgttttattaat 12106629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 159
Target Start/End: Original strand, 8796364 - 8796406
Alignment:
Q  117 gttttattaattgtgggactaaaatgaaaatttgaaattattt 159  Q
    ||||||||||||||| ||||||||| |||||||||||||||||    
T  8796364 gttttattaattgtgagactaaaataaaaatttgaaattattt 8796406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 71 - 128
Target Start/End: Complemental strand, 36175374 - 36175317
Alignment:
Q  71 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaatt 128  Q
    ||||||||||| ||| ||||| ||||||||||| ||||||| |||||||| |||||||    
T  36175374 ggatttatttggcaaacggagaaaaaaatgaggcaccaaaacgtacgtttcattaatt 36175317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 156
Target Start/End: Original strand, 3455577 - 3455715
Alignment:
Q  19 cactcttaaggttggtccaccatagacgtttt--ggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtac 116  Q
    |||||||||||||||||||||||| || ||||  || ||||||||||||  |  |||||||||||||   |||||  ||| |||| |||||||||  |      
T  3455577 cactcttaaggttggtccaccata-acattttggggggttaaagttaactgtcaggatttatttgactgacggagacaaacatgaaggaccaaaacatga 3455675  T
Q  117 gttttattaattgtgggactaaaatgaaaatttgaaatta 156  Q
    ||||||||| || || ||| |||||||||| |||||||||    
T  3455676 gttttattagttatgagaccaaaatgaaaacttgaaatta 3455715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 35372094 - 35372248
Alignment:
Q  1 aataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaat 99  Q
    ||||||||||||||||||| ||| ||||  |||||||| ||||||| ||| | |||||| ||||||  |  ||||||||||| ||| | ||||||||  |    
T  35372094 aataaggtctacgatggaccacttttaaaattggtccaacatagacattt-gaagttaa-gttaacagtaaggatttatttggcaaacagaggaaaaggt 35372191  T
Q  100 gagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaatta 156  Q
    ||||||| |||| |    |||||||||||||| ||| ||||||||||  ||||||||    
T  35372192 gagggactaaaacgccatttttattaattgtgagaccaaaatgaaaacatgaaatta 35372248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 146
Target Start/End: Original strand, 53614225 - 53614353
Alignment:
Q  19 cactcttaaggttggtccaccatagacgtt--ttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtac 116  Q
    ||||||||||| || |||||||||||| ||  |||| |||||| ||||||  | ||||||||||| |||   ||||||||  |||||||| |||| |       
T  53614225 cactcttaaggatgatccaccatagacattatttggggttaaacttaacgcct-ggatttatttggcaaatagaggaaaatgtgagggactaaaacgcca 53614323  T
Q  117 gttttattaattgtgggactaaaatgaaaa 146  Q
    ||||||||||||||||||| ||||| ||||    
T  53614324 gttttattaattgtgggaccaaaataaaaa 53614353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 40745401 - 40745557
Alignment:
Q  1 aataaggtctacgatgga-cactcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaat 99  Q
    |||||||||||||||| | |||| ||||||||| | || |||| ||  |||||| |||||||||||| |   |||||||||  ||| |  |||||||  |    
T  40745401 aataaggtctacgatgaaccacttttaaggttgatacatcataaac-atttggaattaaagttaacggtcaagatttattttgcaaacaaaggaaaatct 40745499  T
Q  100 gagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattat 157  Q
    |||||| ||||| | | ||||||| ||||||| ||| |||||||||| || |||||||    
T  40745500 gagggatcaaaacgaaagttttatcaattgtgagaccaaaatgaaaacttaaaattat 40745557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 130 - 174
Target Start/End: Original strand, 10301882 - 10301926
Alignment:
Q  130 tgggactaaaatgaaaatttgaaattatttgagggaccattgaat 174  Q
    |||||| |||||||||| | ||||||| |||||||||||||||||    
T  10301882 tgggaccaaaatgaaaaatggaaattagttgagggaccattgaat 10301926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 107; Significance: 2e-53; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 325120 - 325301
Alignment:
Q  1 aataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaat 99  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||| ||| | |||||||||||||  |  ||||||||||| ||| ||||||||||  |    
T  325120 aataaggtctacgatggaccactattaaggttggtccaccatagacatttag-agttaaagttaacagtcgggatttatttggcaaacggaggaaaactt 325218  T
Q  100 gagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 182  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||  ||||||||||    
T  325219 gagggaccaaaaggtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttgagggaccattagatcaaataag 325301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 22047897 - 22047732
Alignment:
Q  19 cactcttaaggttggtccaccatagacgt--tttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtac 116  Q
    |||||||||||||| |||||||||||| |  ||| |||||||| |||||     ||||||||||| ||| ||||||||||||||||||||||||| ||||    
T  22047897 cactcttaaggttgatccaccatagacatcatttagagttaaacttaacagccaggatttatttggcaaacggaggaaaaaatgagggaccaaaacgtac 22047798  T
Q  117 gttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 182  Q
    ||||||||||||||||||| |||||||||| ||||||||| || ||||||||||| ||||||||||    
T  22047797 gttttattaattgtgggaccaaaatgaaaacttgaaattaattaagggaccattggatcaaataag 22047732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 19 - 184
Target Start/End: Original strand, 27705268 - 27705434
Alignment:
Q  19 cactcttaaggttggtccaccatagacgt--tttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtac 116  Q
    |||| |||||||||||||||||||||| |  |||||| |||||||||||  | || ||||||||| |||  |||||||||  ||||||||||||| ||||    
T  27705268 cacttttaaggttggtccaccatagacatcatttgga-ttaaagttaactgtctgtatttatttggcaaaaggaggaaaatctgagggaccaaaacgtac 27705366  T
Q  117 gttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataagtc 184  Q
    ||||||||||||||  ||| |||||||||| |||||||||||||||| ||||||||||||||||||||    
T  27705367 gttttattaattgtatgaccaaaatgaaaacttgaaattatttgaggaaccattgaatcaaataagtc 27705434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 30859123 - 30859288
Alignment:
Q  19 cactcttaaggttggtccaccatagacgt--tttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtac 116  Q
    |||||||||| |||||||||||||||| |  ||||| |||||| |||||| |   || ||||||| ||| | ||||||||  ||||||||  ||| ||||    
T  30859123 cactcttaagattggtccaccatagacatcatttggggttaaacttaacggtcaagacttatttggcaaacagaggaaaatgtgagggacttaaacgtac 30859222  T
Q  117 gttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 182  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||| | |||||||||||||    
T  30859223 gttttattaattgtgggaccaaaatgaaaacttgaaattatttgagggactaatgaatcaaataag 30859288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 39604018 - 39603853
Alignment:
Q  19 cactcttaaggttggtccaccatagacgt--tttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtac 116  Q
    |||| |||||||||||| ||||||||| |  ||||| |||||| |||||  |   |||||||||| ||| ||||||||||  ||||||||||||| ||||    
T  39604018 cacttttaaggttggtctaccatagacatcatttggggttaaacttaacagtcatgatttatttggcaaacggaggaaaatttgagggaccaaaacgtac 39603919  T
Q  117 gttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 182  Q
    ||||||||||||||||||  |||||||||| |||||||||||||||||| || || ||||||||||    
T  39603918 gttttattaattgtgggatcaaaatgaaaacttgaaattatttgagggatcaatggatcaaataag 39603853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 30857962 - 30857800
Alignment:
Q  19 cactcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgt 118  Q
    |||| |||||||||||||| ||||||| |||   |||||||||||||  ||  ||||||||||||||  |||||||||  ||| |||||||||  |||||    
T  30857962 cacttttaaggttggtccatcatagacatttaa-agttaaagttaactgttaagatttatttgacaaaaggaggaaaatctgaaggaccaaaacatacgt 30857864  T
Q  119 tttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 182  Q
    ||||||||||||||||| |||||||||| || |||||| ||   ||||||||||||||||||||    
T  30857863 tttattaattgtgggaccaaaatgaaaacttaaaattaattagaggaccattgaatcaaataag 30857800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 71 - 181
Target Start/End: Original strand, 39605474 - 39605584
Alignment:
Q  71 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccatt 170  Q
    ||||||||||| ||| ||||||||||  ||||||||||||| ||| ||||||||||||||||||| |||||||||| ||||||||| ||   ||||||||    
T  39605474 ggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttttattaattgtgggaccaaaatgaaaacttgaaattaattagaggaccatt 39605573  T
Q  171 gaatcaaataa 181  Q
    |||||||||||    
T  39605574 gaatcaaataa 39605584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 71 - 159
Target Start/End: Original strand, 22049141 - 22049229
Alignment:
Q  71 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattattt 159  Q
    ||||||||||| ||| | ||||||||| ||||||||||||| |||||||||||||||| |||||| |||||||||| ||||||||||||    
T  22049141 ggatttatttgccaaacagaggaaaaagtgagggaccaaaacgtacgttttattaattatgggaccaaaatgaaaacttgaaattattt 22049229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 30912097 - 30912252
Alignment:
Q  1 aataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaat 99  Q
    ||||||||||| |||| || ||| |||||||||||||||||||||  ||| |||||||||||||||  || ||||||||||| ||| ||||| ||||  |    
T  30912097 aataaggtctatgatgtaccacttttaaggttggtccaccatagatattt-ggagttaaagttaacacttgggatttatttggcaaacggagaaaaaggt 30912195  T
Q  100 gagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaatta 156  Q
    ||||||| |||| |    |||||||||||||||||| ||||||||||  ||||||||    
T  30912196 gagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaatta 30912252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 75 - 182
Target Start/End: Complemental strand, 15941380 - 15941274
Alignment:
Q  75 ttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaat 174  Q
    ||||||||||| |||| |||||| |||||||||||| ||||||||||||||||| ||| |  |||||||||| || |||||| |||| ||||| ||| ||    
T  15941380 ttatttgacaaacggaagaaaaagtgagggaccaaatggtacgttttattaattatggaatcaaaatgaaaacttaaaatta-ttgaaggaccgttggat 15941282  T
Q  175 caaataag 182  Q
    ||||||||    
T  15941281 caaataag 15941274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 168
Target Start/End: Complemental strand, 8521414 - 8521269
Alignment:
Q  22 tcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgtttt 121  Q
    ||||||||||||||||||||| || ||| || ||||||||||||  |  |||||||||||||   |||||  |||  |||||||||||||  |  |||||    
T  8521414 tcttaaggttggtccaccatacacatttggg-gttaaagttaaccgtcgggatttatttgactgacggagacaaacgtgagggaccaaaacatgagtttt 8521316  T
Q  122 attaattgtgggactaaaatgaaaatttgaaattatttgagggacca 168  Q
    |||| || |||||| |||||||||| ||||||||| || ||||||||    
T  8521315 attagttatgggaccaaaatgaaaacttgaaattaattaagggacca 8521269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 168
Target Start/End: Original strand, 22308752 - 22308901
Alignment:
Q  19 cactcttaaggttggtccaccatagacgttttggagttaaagttaacgatt-tggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacg 117  Q
    |||||||||||| |||||||||||||| ||| || |||||| ||||| |   |||||||||||| ||| ||||| ||||  |||||||| |||| |   |    
T  22308752 cactcttaaggtaggtccaccatagacatttggg-gttaaacttaacaaccatggatttatttggcaaacggagcaaaatgtgagggactaaaacgcctg 22308850  T
Q  118 ttttattaattgtgggactaaaatgaaaatttgaaattatttgagggacca 168  Q
    ||||||||||| |||||| ||||||||||  |||||||||||  |||||||    
T  22308851 ttttattaattatgggaccaaaatgaaaacatgaaattatttaggggacca 22308901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 168
Target Start/End: Original strand, 1010318 - 1010466
Alignment:
Q  19 cactcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgt 118  Q
    |||||||||||||||||||||||| || ||| || ||||||||||||  |  |||||||||||||   |||||  |||  |||||||||||||  |  ||    
T  1010318 cactcttaaggttggtccaccatacacatttggg-gttaaagttaaccgtcgggatttatttgactgacggagacaaacgtgagggaccaaaacatgagt 1010416  T
Q  119 tttattaattgtgggactaaaatgaaaatttgaaattatttgagggacca 168  Q
    ||||||| || |||||| ||||| |||| ||||||||| || ||||||||    
T  1010417 tttattagttatgggaccaaaataaaaacttgaaattaattaagggacca 1010466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 101 - 170
Target Start/End: Original strand, 24509071 - 24509140
Alignment:
Q  101 agggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccatt 170  Q
    ||||||||||||||||||||||||| || |||||| |||||||||||| | ||||| || ||||||||||    
T  24509071 agggaccaaaaggtacgttttattacttatgggaccaaaatgaaaattggtaattaattaagggaccatt 24509140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 101 - 168
Target Start/End: Complemental strand, 24503265 - 24503198
Alignment:
Q  101 agggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggacca 168  Q
    ||||||||||||||||||||||||| || |||||| |||||||||||| | ||||| || ||||||||    
T  24503265 agggaccaaaaggtacgttttattacttatgggaccaaaatgaaaattggtaattaattaagggacca 24503198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 123 - 182
Target Start/End: Original strand, 41798004 - 41798063
Alignment:
Q  123 ttaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 182  Q
    ||||||||||||| ||||| |||| ||||||||||||||||||||| || ||||||||||    
T  41798004 ttaattgtgggaccaaaataaaaacttgaaattatttgagggaccaatggatcaaataag 41798063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 71 - 187
Target Start/End: Complemental strand, 15548348 - 15548235
Alignment:
Q  71 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccatt 170  Q
    ||||||||||| ||| ||||||||||| |||||||| |||  ||   ||||||||||| |||||  ||||  |||||||||||||||||  ||||||| |    
T  15548348 ggatttatttggcaaacggaggaaaaa-tgagggactaaatagtgaattttattaattatgggataaaaa--aaaatttgaaattatttaggggaccaat 15548252  T
Q  171 gaatcaaataagtcatt 187  Q
    | |||||||||||||||    
T  15548251 ggatcaaataagtcatt 15548235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 29 - 168
Target Start/End: Complemental strand, 32757978 - 32757839
Alignment:
Q  29 gttggtccaccatagacgttttggagttaaagttaacgatt-tggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaat 127  Q
    ||||||||||||||||| ||| || ||||||||||||     ||||||||||||||   ||||||  ||  |||||||||||||  |  ||||||||| |    
T  32757978 gttggtccaccatagacatttggg-gttaaagttaacacccatggatttatttgaccggcggaggtgaacttgagggaccaaaacatgagttttattatt 32757880  T
Q  128 tgtgggactaaaatgaaaatttgaaattatttgagggacca 168  Q
    | |||||| |||||||||| | |||||||||||||||||||    
T  32757879 tatgggaccaaaatgaaaactggaaattatttgagggacca 32757839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 71 - 182
Target Start/End: Complemental strand, 34894260 - 34894149
Alignment:
Q  71 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccatt 170  Q
    |||||| |||| ||| |||||  |||| | |||||||||||||||| |||||||| ||  ||||| |||||||||| | ||||||| || |||||||| |    
T  34894260 ggatttttttggcaaacggagacaaaactaagggaccaaaaggtactttttattacttacgggaccaaaatgaaaaatggaaattaattaagggaccaat 34894161  T
Q  171 gaatcaaataag 182  Q
    | ||| ||||||    
T  34894160 ggatctaataag 34894149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 159
Target Start/End: Complemental strand, 11262321 - 11262279
Alignment:
Q  117 gttttattaattgtgggactaaaatgaaaatttgaaattattt 159  Q
    |||||||||||||||||||||||||||||| || |||||||||    
T  11262321 gttttattaattgtgggactaaaatgaaaacttaaaattattt 11262279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 324221 - 324109
Alignment:
Q  1 aataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagtt-aaagttaacgatttggatttatttgacaatcgg-aggaaaaa 97  Q
    ||||||||||| ||||||| ||| |||| |||||||||||||||||  ||| ||||| |||||||||  || | |||||||||| || ||| ||||||||    
T  324221 aataaggtctatgatggaccactattaaagttggtccaccatagac-atttagagttaaaagttaacagttggaatttatttgagaaacggaaggaaaaa 324123  T
Q  98 atgagggaccaaaa 111  Q
    |||| |||||||||    
T  324122 atgaaggaccaaaa 324109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 117 - 156
Target Start/End: Complemental strand, 9169651 - 9169612
Alignment:
Q  117 gttttattaattgtgggactaaaatgaaaatttgaaatta 156  Q
    |||||||||||| ||||||||||||||||| |||||||||    
T  9169651 gttttattaattatgggactaaaatgaaaacttgaaatta 9169612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 118 - 156
Target Start/End: Complemental strand, 20538117 - 20538079
Alignment:
Q  118 ttttattaattgtgggactaaaatgaaaatttgaaatta 156  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  20538117 ttttattaattatgggaccaaaatgaaaatttgaaatta 20538079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 324117 - 324068
Alignment:
Q  132 ggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataa 181  Q
    |||| |||||||||| ||||||||||||||| |||||| |||| ||||||    
T  324117 ggaccaaaatgaaaaattgaaattatttgagtgaccatcgaatgaaataa 324068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 168
Target Start/End: Original strand, 32759081 - 32759150
Alignment:
Q  99 tgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggacca 168  Q
    |||||||||||||  |  ||||||||| || ||| ||||||||||||| |  ||||||||||||||||||    
T  32759081 tgagggaccaaaacatgagttttattatttatggaactaaaatgaaaactgaaaattatttgagggacca 32759150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 182
Target Start/End: Original strand, 34898986 - 34899067
Alignment:
Q  101 agggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 182  Q
    ||||||||||| |||| |||||||| || |||||| |||||||||| |  |||||| || |||||||| || ||| ||||||    
T  34898986 agggaccaaaatgtactttttattacttatgggaccaaaatgaaaaatgaaaattaattaagggaccaatggatctaataag 34899067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 156
Target Start/End: Original strand, 8523698 - 8523836
Alignment:
Q  19 cactcttaaggttggtccaccatagacgtttt--ggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtac 116  Q
    |||||| ||||||||||||||||| || ||||  || ||||||||||||  |  |||||||||||||   |||||  ||| |||| ||| |||||  |      
T  8523698 cactctgaaggttggtccaccata-acattttggggggttaaagttaactgtcaggatttatttgactgacggagacaaacatgaaggatcaaaacatga 8523796  T
Q  117 gttttattaattgtgggactaaaatgaaaatttgaaatta 156  Q
    ||||||||| || |||||| |||||||||| |||||||||    
T  8523797 gttttattagttatgggaccaaaatgaaaacttgaaatta 8523836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 102; Significance: 2e-50; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 125165 - 125349
Alignment:
Q  1 aataaggtctacgatggac-actcttaaggttggtccaccatagacgt--tttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaa 97  Q
    ||||||||||| | ||||| ||| |||||||||||||| |||| || |  ||||| |||||| |||||  || ||||||||||| ||| |||||||||||    
T  125165 aataaggtctatggtggaccacttttaaggttggtccatcatatacatcatttggggttaaacttaaccgttaggatttatttggcaaacggaggaaaaa 125264  T
Q  98 atgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 182  Q
     ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  125265 gtgagggaccaaaaggtacgttttattaattgtgggaccaaaatgaaaatttgaaattatttgagggaccattggatcaaataag 125349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 124131 - 123969
Alignment:
Q  19 cactcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgt 118  Q
    ||||||||||||||||||||||||||  ||| || |||||| |||||  |  ||||||||||| ||| | ||||||||| ||||||||||||| ||||||    
T  124131 cactcttaaggttggtccaccatagatatttggg-gttaaacttaaccgtaaggatttatttggcaaacagaggaaaaagtgagggaccaaaatgtacgt 124033  T
Q  119 tttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 182  Q
    ||||||||||||||||| |||||||||| |||||||||||||| ||||||||| ||||||||||    
T  124032 tttattaattgtgggaccaaaatgaaaacttgaaattatttgaaggaccattggatcaaataag 123969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 99; Significance: 1e-48; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 6348336 - 6348155
Alignment:
Q  1 aataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaat 99  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||| |||  | |||||| ||||| ||  | ||||||||||||| | ||||||||| |    
T  6348336 aataaggtctacggtggaccactcttaaggttggtccaccatagacatttgag-gttaaacttaaccatcagaatttatttgacaaacagaggaaaaagt 6348238  T
Q  100 gagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 182  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||  ||||||||||    
T  6348237 gaggaaccaaaaggtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttgagggaccatttgatcaaataag 6348155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 1587364 - 1587182
Alignment:
Q  1 aataaggtctacgatgga-cactcttaaggttggtccaccatagacgttttggagttaaa-gttaacgatttggatttatttgacaatcggaggaaaaaa 98  Q
    |||||||| ||||||||| |||| |||| ||||||| || |||||| ||| | ||||||| |||||| ||  ||||||||||| ||| |||||||||||     
T  1587364 aataaggtatacgatggaacacttttaaagttggtctactatagacatttag-agttaaaagttaaccatcgggatttatttggcaaacggaggaaaaag 1587266  T
Q  99 tgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 182  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||| ||||||||||    
T  1587265 tgagggaccaaaaggtacgttttattaattgtgagactaaaatgaaaatttaaaattatttgagggaccgttggatcaaataag 1587182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 72 - 182
Target Start/End: Complemental strand, 37882944 - 37882834
Alignment:
Q  72 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattg 171  Q
    |||||||||| ||| ||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||     
T  37882944 gatttatttggcaaacggaggaaaaggtgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaacttgaaattatttgagggaccatta 37882845  T
Q  172 aatcaaataag 182  Q
    |||||||||||    
T  37882844 aatcaaataag 37882834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 1794595 - 1794411
Alignment:
Q  1 aataaggtctacgatggac-actcttaaggttggtccaccatagacgt--tttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaa 97  Q
    ||||||||||| | ||||| ||||||||||||||||||||||| || |  |||||  ||||| |||||  || ||||||||||||||| | |||||||||    
T  1794595 aataaggtctatggtggaccactcttaaggttggtccaccatatacatcatttgggattaaacttaaccgttaggatttatttgacaaacagaggaaaaa 1794496  T
Q  98 atgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 182  Q
     ||||||| |||||||||  |||||||||||||| ||  |||||||||| |||||||||||||||||||||||||||||||||||    
T  1794495 gtgagggatcaaaaggtatattttattaattgtgagatcaaaatgaaaacttgaaattatttgagggaccattgaatcaaataag 1794411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 19 - 180
Target Start/End: Original strand, 6349504 - 6349667
Alignment:
Q  19 cactcttaaggttggtccaccatagacgt--tttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtac 116  Q
    |||||||||||||| ||||||||| || |  ||||| |||||| |||||| |  |||| ||||||  || |||| |||||  ||||||||||||||||||    
T  6349504 cactcttaaggttgatccaccatatacatcatttggggttaaacttaacgttcgggatctatttggtaaacggaagaaaaggtgagggaccaaaaggtac 6349603  T
Q  117 gttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaata 180  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  6349604 gttttattaattgtgggaccaaaatgaaaacttgaaattatttgagggaccattgaatcaaata 6349667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 393572 - 393754
Alignment:
Q  1 aataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgatttgg-atttatttgacaatcggaggaaaaaa 98  Q
    ||||||||||||||||||| ||| ||||||||||||||| ||| || ||| | | |||||||||||  |  || ||||||||| ||| ||||| |||||     
T  393572 aataaggtctacgatggaccacttttaaggttggtccactataaacatttagaa-ttaaagttaacagtccgggatttatttggcaaacggagaaaaaag 393670  T
Q  99 tgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 182  Q
    |||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||    
T  393671 tgagggaccaaaagatactttttattaattgtgggaccaaaatgaaaatttgaaattatttgagggaccgttggatcaaataag 393754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 1829935 - 1829753
Alignment:
Q  1 aataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaa-gttaacgatttggatttatttgacaatcggaggaaaaaa 98  Q
    ||||||||||||||||||| ||| |||| |||||||||| |||||| ||| | ||||||| ||||||  |  | ||||||||||||| || ||||||||     
T  1829935 aataaggtctacgatggaccacttttaaagttggtccacgatagacatttag-agttaaaagttaacagtcggaatttatttgacaaacgtaggaaaaag 1829837  T
Q  99 tgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 182  Q
    |||||||| ||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||| ||||||||||    
T  1829836 tgagggactaaaagatacgttttattaattgtgggaccaaaatgaaaacttgaaattatttgagggaccgttggatcaaataag 1829753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 71 - 182
Target Start/End: Original strand, 1831268 - 1831379
Alignment:
Q  71 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccatt 170  Q
    |||||||||||| ||  |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  1831268 ggatttatttgaaaaatggaggaaaaaatgagggaccaaaatgtacgttttattaattgtgggactaaaatgaaaacttgaaattaattgagggaccatt 1831367  T
Q  171 gaatcaaataag 182  Q
    | ||||||||||    
T  1831368 ggatcaaataag 1831379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 29 - 182
Target Start/End: Complemental strand, 1188996 - 1188843
Alignment:
Q  29 gttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaatt 128  Q
    |||||| |||||||||| ||| ||  | |||||||||| |  ||||||||||| ||| ||||||||||| ||||||||||||| ||||||||||||||||    
T  1188996 gttggttcaccatagacatttagggttaaaagttaacgttcgggatttatttggcaaacggaggaaaaagtgagggaccaaaatgtacgttttattaatt 1188897  T
Q  129 gtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 182  Q
    ||||||| ||||| |||| ||||||||||||||||||| |||| ||||||||||    
T  1188896 gtgggaccaaaataaaaacttgaaattatttgagggactattggatcaaataag 1188843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 48 - 182
Target Start/End: Original strand, 37884259 - 37884393
Alignment:
Q  48 tttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaat 147  Q
    ||||| |||||| |||||  | |||||||||||| ||| ||||||||||| | | |||||||||||||| ||||||||||| |||||| |||||||||||    
T  37884259 tttggggttaaacttaacagtctggatttatttggcaaacggaggaaaaagtaaaggaccaaaaggtacattttattaattatgggacaaaaatgaaaat 37884358  T
Q  148 ttgaaattatttgagggaccattgaatcaaataag 182  Q
    || ||||||||||||||||||||||||||||||||    
T  37884359 ttaaaattatttgagggaccattgaatcaaataag 37884393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 73 - 182
Target Start/End: Complemental strand, 24426448 - 24426339
Alignment:
Q  73 atttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattga 172  Q
    |||| |||| ||| ||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||     
T  24426448 atttttttggcaaacggaggaaaaagtgagggaccaaaaggtacgttttattaattgtgagaccaaaatgaaaacttgaaattatttgagggaccattgg 24426349  T
Q  173 atcaaataag 182  Q
    ||||||||||    
T  24426348 atcaaataag 24426339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 19 - 196
Target Start/End: Complemental strand, 52240041 - 52239863
Alignment:
Q  19 cactcttaaggttggtccaccatagacgt--tttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtac 116  Q
    ||||||||||||||||||||||||||| |  ||||| ||||||||||||  || | ||||||||| ||| ||||| ||||  ||| | ||||||| ||||    
T  52240041 cactcttaaggttggtccaccatagacatcatttgg-gttaaagttaacccttggaatttatttggcaaacggagaaaaacctgaagaaccaaaacgtac 52239943  T
Q  117 gttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataagtcatttatttatta 196  Q
    ||||||||||||||||||  ||||| ||||||||||||||||||||||||||||  |||||||||| |||| ||| ||||    
T  52239942 gttttattaattgtgggatcaaaataaaaatttgaaattatttgagggaccattagatcaaataagccattaattaatta 52239863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 71 - 188
Target Start/End: Complemental strand, 390328 - 390211
Alignment:
Q  71 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccatt 170  Q
    ||||||||||| ||| |||||||| ||||||||||||||||  |||||||||||||||||||||| |||||||||| ||||||||||||  ||||||| |    
T  390328 ggatttatttggcaaacggaggaagaaatgagggaccaaaatatacgttttattaattgtgggaccaaaatgaaaacttgaaattatttaggggaccaat 390229  T
Q  171 gaatcaaataagtcattt 188  Q
    |||||||||||| |||||    
T  390228 gaatcaaataagccattt 390211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 53 - 182
Target Start/End: Complemental strand, 2311052 - 2310923
Alignment:
Q  53 agttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaa 152  Q
    |||||||||||||  || ||||||||||| ||||||||||||||  ||||||||||||| ||||||||||||||||||||||| |||||||||| |||||    
T  2311052 agttaaagttaactgttaggatttatttggcaatcggaggaaaatctgagggaccaaaacgtacgttttattaattgtgggaccaaaatgaaaacttgaa 2310953  T
Q  153 attatttgagggaccattgaatcaaataag 182  Q
    |||| ||   ||||||||| ||||||||||    
T  2310952 attaattagaggaccattggatcaaataag 2310923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 42810137 - 42810320
Alignment:
Q  1 aataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaat 99  Q
    ||||||||||| | ||||| ||||||||| ||||| |||||||||| | | || |||||| |||||     ||||||||||| ||| ||||||||||  |    
T  42810137 aataaggtctatggtggactactcttaagattggttcaccatagacatctgggggttaaacttaacaccaaggatttatttggcaaacggaggaaaatgt 42810236  T
Q  100 gagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataagt 183  Q
    |||||||  ||| ||||||||||||||||||||||| |||||||||| |||||||||||| |||||| |||| |||||||||||    
T  42810237 gagggacttaaaagtacgttttattaattgtgggaccaaaatgaaaagttgaaattatttaagggactattggatcaaataagt 42810320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 2312433 - 2312598
Alignment:
Q  19 cactcttaaggttggtccaccatagacgt--tttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtac 116  Q
    |||| ||||| |||||||||||||||| |  ||||| |||||| |||||| |   |||||||||| ||| ||||||||||| ||||||||  ||| ||||    
T  2312433 cacttttaagattggtccaccatagacatcatttggggttaaacttaacggtcatgatttatttggcaaacggaggaaaaagtgagggacttaaacgtac 2312532  T
Q  117 gttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 182  Q
    |||||||||||||||||||||||||| ||| |||||||||| | |||||||| || ||||||||||    
T  2312533 gttttattaattgtgggactaaaatggaaacttgaaattatctaagggaccaatggatcaaataag 2312598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 87 - 181
Target Start/End: Original strand, 27850953 - 27851047
Alignment:
Q  87 cggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataa 181  Q
    ||||||||||| |||||||||||||  |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||    
T  27850953 cggaggaaaaattgagggaccaaaatatacgttttattaattgtgggaccaaaatgaaaacttgaaattatttgagggaccattggatcaaataa 27851047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 29 - 182
Target Start/End: Original strand, 44503642 - 44503794
Alignment:
Q  29 gttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaatt 128  Q
    |||||| |||||||||| ||| ||  | |||||||||| |  ||||||||||| ||| | ||||||||| ||||||||||||| |||||||| |||||||    
T  44503642 gttggttcaccatagacatttagggttaaaagttaacggtcgggatttatttggcaaacagaggaaaaagtgagggaccaaaatgtacgttt-attaatt 44503740  T
Q  129 gtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 182  Q
    ||| ||| ||||| |||| ||||||||||||||||||| |||||||||||||||    
T  44503741 gtgagaccaaaataaaaacttgaaattatttgagggactattgaatcaaataag 44503794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 58 - 182
Target Start/End: Complemental strand, 4129117 - 4128993
Alignment:
Q  58 aagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattat 157  Q
    ||||||||| |  ||||||||||| ||| ||||| ||||| | ||||||||||| |||| |||||||||||||||||| |||||||||| ||||||||||    
T  4129117 aagttaacggtcgggatttatttggcaaacggagaaaaaagtaagggaccaaaatgtacattttattaattgtgggaccaaaatgaaaacttgaaattat 4129018  T
Q  158 ttgagggaccattgaatcaaataag 182  Q
    |||||| ||||||| ||||||||||    
T  4129017 ttgaggaaccattggatcaaataag 4128993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 71 - 182
Target Start/End: Complemental strand, 42871206 - 42871095
Alignment:
Q  71 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccatt 170  Q
    ||||||||||| ||| ||||||||||| ||||||||||||| ||||||||||||||||||||||  |||||||||||||||||||| |   |||||||||    
T  42871206 ggatttatttggcaaacggaggaaaaagtgagggaccaaaacgtacgttttattaattgtgggatcaaaatgaaaatttgaaattaatcaggggaccatt 42871107  T
Q  171 gaatcaaataag 182  Q
    | ||||||||||    
T  42871106 ggatcaaataag 42871095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 4 - 159
Target Start/End: Complemental strand, 52963747 - 52963592
Alignment:
Q  4 aaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgag 102  Q
    |||||||| ||||||| ||| |||||| ||||||||||||||| ||| |||||||||||||||  |   |||||||||||||| ||||| ||||  ||||    
T  52963747 aaggtctatgatggaccacttttaaggctggtccaccatagacattt-ggagttaaagttaacagtcgagatttatttgacaaacggagaaaaacttgag 52963649  T
Q  103 ggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattattt 159  Q
    |||||||||  |||| ||||||||||||| ||| |||||||||| ||||||||||||    
T  52963648 ggaccaaaacatacgatttattaattgtgagaccaaaatgaaaacttgaaattattt 52963592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 40792930 - 40792751
Alignment:
Q  1 aataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaat 99  Q
    |||||||||||| || ||| ||| ||||||||||||||| |||||| |||   |||||||||||||  |  ||||||||||| ||| ||||| ||||  |    
T  40792930 aataaggtctaccatagaccacttttaaggttggtccactatagacatttaa-agttaaagttaac--tcgggatttatttggcaaacggagaaaaatct 40792834  T
Q  100 gagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 182  Q
    |||||||||||| ||| ||||||||||||||||||| |||||||||| || |||||| ||   |||||||| |||||||||||    
T  40792833 gagggaccaaaatgtatgttttattaattgtgggaccaaaatgaaaacttaaaattaattagaggaccattaaatcaaataag 40792751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 75 - 181
Target Start/End: Original strand, 42872308 - 42872414
Alignment:
Q  75 ttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaat 174  Q
    ||||||| ||| ||||||||||| ||||||||||||| |||| ||||||||||| |||||| |||||||||| | | ||||| ||  |||||||||||||    
T  42872308 ttatttggcaaacggaggaaaaagtgagggaccaaaacgtacattttattaattatgggaccaaaatgaaaaatggtaattaattaggggaccattgaat 42872407  T
Q  175 caaataa 181  Q
    |||||||    
T  42872408 caaataa 42872414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 73 - 182
Target Start/End: Complemental strand, 11968620 - 11968511
Alignment:
Q  73 atttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattga 172  Q
    |||||||| |||| ||||| ||||  ||||||||||||| ||| ||||||||||||||| ||| |||||||||| |||||||||||||||| |||||       
T  11968620 atttattttacaaacggagcaaaatctgagggaccaaaaagtatgttttattaattgtgagaccaaaatgaaaacttgaaattatttgaggaaccataag 11968521  T
Q  173 atcaaataag 182  Q
    ||||||||||    
T  11968520 atcaaataag 11968511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 70 - 182
Target Start/End: Original strand, 53205487 - 53205599
Alignment:
Q  70 tggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccat 169  Q
    |||||||||||| ||| ||||||||||| |||||||| |||| |    |||| ||||||||||||| ||||||||||| |||||||||||| ||||| |     
T  53205487 tggatttatttggcaaacggaggaaaaagtgagggactaaaacgcctatttttttaattgtgggacgaaaatgaaaatctgaaattatttgggggactaa 53205586  T
Q  170 tgaatcaaataag 182  Q
    |||||||||||||    
T  53205587 tgaatcaaataag 53205599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 73 - 168
Target Start/End: Original strand, 1588096 - 1588191
Alignment:
Q  73 atttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggacca 168  Q
    |||||||||  || ||||||||||| |||||||   ||| |||| ||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  1588096 atttatttggtaaacggaggaaaaagtgagggatttaaacgtacattttattaattgtgggactaaaatgaaaacttaaaattatttgagggacca 1588191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 72 - 182
Target Start/End: Complemental strand, 44501628 - 44501518
Alignment:
Q  72 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattg 171  Q
    |||||||||| ||| | ||| ||||| ||||||||  ||| |||||||||||||||| |||||| | |||||||| ||||||||||||||||||||| ||    
T  44501628 gatttatttggcaaacagagaaaaaagtgagggacttaaacgtacgttttattaattatgggaccagaatgaaaacttgaaattatttgagggaccaatg 44501529  T
Q  172 aatcaaataag 182  Q
      |||||||||    
T  44501528 gttcaaataag 44501518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 71 - 192
Target Start/End: Original strand, 1190197 - 1190318
Alignment:
Q  71 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccatt 170  Q
    ||||||||||| ||| | ||| ||||| ||||| ||  ||| |||||||||||||||| |||||| |||||||||| || |||||||||||||||||| |    
T  1190197 ggatttatttggcaaacagagaaaaaagtgaggtacttaaacgtacgttttattaattatgggaccaaaatgaaaacttaaaattatttgagggaccaat 1190296  T
Q  171 gaatcaaataagtcatttattt 192  Q
    |  ||||||||| |||| ||||    
T  1190297 ggttcaaataagccattaattt 1190318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 48 - 184
Target Start/End: Complemental strand, 27847812 - 27847676
Alignment:
Q  48 tttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaat 147  Q
    ||||| |||||| |||||  | |||||||||||| ||| |||| |||||| | ||||||| |||  ||| |||||||||||||||||| ||||| ||||     
T  27847812 tttggggttaaacttaaccgtctggatttatttggcaaacggaagaaaaattaagggaccgaaaaatacattttattaattgtgggaccaaaataaaaac 27847713  T
Q  148 ttgaaattatttgagggaccattgaatcaaataagtc 184  Q
    |||||||||||||||| |  |||  ||||||||||||    
T  27847712 ttgaaattatttgaggaattattagatcaaataagtc 27847676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 48 - 156
Target Start/End: Original strand, 52241137 - 52241245
Alignment:
Q  48 tttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaat 147  Q
    ||||||||||||||||||| |  | ||||||||| ||| |||||||||| |||||| | ||||| |||||||||||||||||||| |  ||||||||||     
T  52241137 tttggagttaaagttaacggtcggaatttatttggcaaacggaggaaaagatgaggaatcaaaacgtacgttttattaattgtggaatcaaaatgaaaac 52241236  T
Q  148 ttgaaatta 156  Q
     ||||||||    
T  52241237 atgaaatta 52241245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 71 - 182
Target Start/End: Original strand, 31968397 - 31968508
Alignment:
Q  71 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccatt 170  Q
    ||||||||||| ||| | ||||||||| ||| ||||||||| |||||||||||||||||| |||| |||||||||| || |||||| ||  |||||| ||    
T  31968397 ggatttatttggcaaacagaggaaaaagtgaaggaccaaaacgtacgttttattaattgtaggaccaaaatgaaaaattaaaattaattaggggaccgtt 31968496  T
Q  171 gaatcaaataag 182  Q
    | ||| ||||||    
T  31968497 ggatctaataag 31968508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 10168716 - 10168873
Alignment:
Q  1 aataaggtctacgatggacactct-taaggttggtccaccatagacgttttggagttaaagttaacgatt-tggatttatttgacaatcggaggaaaaaa 98  Q
    |||||||| |||| |||||  ||| ||| ||||||||||||||||| ||| || ||||||||||||  |  |||||||||||| ||| ||||||||||      
T  10168716 aataaggtgtacggtggaccatctataatgttggtccaccatagacatttgggggttaaagttaactgtcatggatttatttggcaaacggaggaaaatg 10168815  T
Q  99 tgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaatta 156  Q
    |||||||| |||| |    |||||||||||||||||| ||||||||||  ||||||||    
T  10168816 tgagggactaaaacgccatttttattaattgtgggaccaaaatgaaaacatgaaatta 10168873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 71 - 184
Target Start/End: Complemental strand, 31965946 - 31965833
Alignment:
Q  71 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccatt 170  Q
    ||||||||||| ||| ||||||||||| ||||||||||||| |||| |||| |||||||| |||| | ||| |||| ||||||||| ||  |||| ||||    
T  31965946 ggatttatttggcaaacggaggaaaaagtgagggaccaaaatgtacattttcttaattgtaggaccagaataaaaacttgaaattaattaggggatcatt 31965847  T
Q  171 gaatcaaataagtc 184  Q
      ||||||||||||    
T  31965846 agatcaaataagtc 31965833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 156
Target Start/End: Complemental strand, 10167536 - 10167451
Alignment:
Q  71 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaatta 156  Q
    ||||||||||||||| |||||||||| ||||||||| |||| | |  ||||||||||||||| || ||||||||||  ||||||||    
T  10167536 ggatttatttgacaaacggaggaaaatatgagggactaaaatgcaatttttattaattgtggtaccaaaatgaaaacatgaaatta 10167451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 23203888 - 23204043
Alignment:
Q  1 aataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaat 99  Q
    |||||||||||| || ||| ||| ||||||||| |||||||||||  ||| | ||||||||||||   || ||||||| ||| ||| ||||| |||| ||    
T  23203888 aataaggtctacaatagaccacttttaaggttgatccaccatagatatttag-agttaaagttaatacttgggatttaattggcaaacggagaaaaagat 23203986  T
Q  100 gagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaatta 156  Q
    || ||||||||| |    ||||||||| |||||||| ||||||||||| ||||||||    
T  23203987 gacggaccaaaacgccatttttattaaatgtgggaccaaaatgaaaatatgaaatta 23204043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 71 - 182
Target Start/End: Original strand, 4871369 - 4871480
Alignment:
Q  71 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccatt 170  Q
    ||||||||||||||| ||||| ||||  || |||||  |||  ||||||||||||||||| | || ||||||||||  |||||||||||  ||||||| |    
T  4871369 ggatttatttgacaaacggagaaaaacgtgggggacttaaacatacgttttattaattgtagaaccaaaatgaaaacatgaaattattttggggaccaat 4871468  T
Q  171 gaatcaaataag 182  Q
    | ||||||||||    
T  4871469 ggatcaaataag 4871480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 195
Target Start/End: Original strand, 15450027 - 15450204
Alignment:
Q  19 cactcttaaggttggtccaccatagacgt--tttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtac 116  Q
    |||||||||||||||||||| ||||||    |||||||||||| |||||  |  | ||||||||| ||| ||||||||||  | || |||  ||| ||||    
T  15450027 cactcttaaggttggtccacgatagacaacatttggagttaaacttaaccgtaag-atttatttggcaaacggaggaaaaggtaagcgacttaaacgtac 15450125  T
Q  117 gttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataagtcatttatttatt 195  Q
    |||||||||| |  ||||  | ||||||||  ||||||||||| |||||||| ||||||||||||| | ||||| ||||    
T  15450126 gttttattaactaagggatcataatgaaaacctgaaattatttaagggaccaatgaatcaaataagccttttatatatt 15450204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 158
Target Start/End: Complemental strand, 49342728 - 49342643
Alignment:
Q  73 atttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatt 158  Q
    |||||||| ||||  |||||||||| ||||||||  ||| |||| |||||||||||||||||  |||||||||| || ||||||||    
T  49342728 atttatttaacaaatggaggaaaaagtgagggacttaaacgtacattttattaattgtgggatcaaaatgaaaacttaaaattatt 49342643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 19 - 156
Target Start/End: Complemental strand, 7707753 - 7707614
Alignment:
Q  19 cactcttaaggttggtccaccatagacgt--tttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtac 116  Q
    ||||||||||||||||| |||| |||| |  ||||| ||||||| ||||  |  ||||||||||| ||| | ||||||||  ||| |||| |||| ||      
T  7707753 cactcttaaggttggtctaccaaagacatcatttggtgttaaagctaaccgtcaggatttatttggcaaacagaggaaaatgtgatggactaaaacgtca 7707654  T
Q  117 gttttattaattgtgggactaaaatgaaaatttgaaatta 156  Q
     |||||||||||||||||| ||||||||||  ||||||||    
T  7707653 tttttattaattgtgggaccaaaatgaaaacatgaaatta 7707614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 52 - 159
Target Start/End: Original strand, 54485530 - 54485638
Alignment:
Q  52 gagttaaagttaacgatttg-gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttg 150  Q
    |||||||||||||   |||| |||||||||| ||| |||| |||||  ||||||| ||||| | | |||||||||||| |||||  |||||||||| |||    
T  54485530 gagttaaagttaatagtttgtgatttatttggcaaacggatgaaaacttgagggatcaaaacgaatgttttattaattatgggatcaaaatgaaaacttg 54485629  T
Q  151 aaattattt 159  Q
    |||||||||    
T  54485630 aaattattt 54485638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 72 - 182
Target Start/End: Original strand, 49344015 - 49344126
Alignment:
Q  72 gatttatttgacaatcggaggaaaaaatga-gggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccatt 170  Q
    |||||||||| ||| ||||||||||| ||| |||||  |||   ||||||||||||||||||||| ||||| |||  || |||||||||   ||||||||    
T  49344015 gatttatttggcaaacggaggaaaaagtgaagggacttaaacccacgttttattaattgtgggaccaaaataaaagcttaaaattatttagaggaccatt 49344114  T
Q  171 gaatcaaataag 182  Q
    | ||||||||||    
T  49344115 ggatcaaataag 49344126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 165
Target Start/End: Complemental strand, 53432225 - 53432079
Alignment:
Q  19 cactcttaaggttggtccaccatagacgttttggagttaaagttaacgatttgg-atttatttgacaatcggaggaaaaaatgagggaccaaaaggtacg 117  Q
    ||||||||| |||||| |||||||||| ||| || |||||| |||||  |  || ||||||||||| | || ||| |||  |||||||||||||  || |    
T  53432225 cactcttaaagttggttcaccatagacatttggg-gttaaacttaaccgtcagggatttatttgaccaacgaaggcaaacttgagggaccaaaacataag 53432127  T
Q  118 ttttattaattgtgggactaaaatgaaaatttgaaattatttgaggga 165  Q
    |||||||| || |||||| |||||||||| ||||||||| || |||||    
T  53432126 ttttattacttatgggaccaaaatgaaaacttgaaattaattaaggga 53432079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 7708723 - 7708868
Alignment:
Q  1 aataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaat 99  Q
    ||||||||||| |||| || ||| |||||||||||||||||||||   ||| ||||||||||||||  || ||||||||||| ||| | ||| ||||  |    
T  7708723 aataaggtctatgatgtaccacttttaaggttggtccaccataga-tatttagagttaaagttaacacttgggatttatttggcaaacagagaaaaaggt 7708821  T
Q  100 gagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaa 146  Q
    ||||||| |||| |    ||||||||||||| | || ||||||||||    
T  7708822 gagggactaaaacgccacttttattaattgtagaaccaaaatgaaaa 7708868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 154
Target Start/End: Original strand, 33232662 - 33232785
Alignment:
Q  29 gttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaatt 128  Q
    |||||||||| |||||| |||  |||||||||||||||     |||||||||| ||| ||||||||||  |||||||| |||| |    |||||||||||    
T  33232662 gttggtccacaatagacattt--gagttaaagttaacggaaaagatttatttggcaaacggaggaaaatgtgagggactaaaacgccatttttattaatt 33232759  T
Q  129 gtgggactaaaatgaaaatttgaaat 154  Q
    ||||||| ||||| ||||| ||||||    
T  33232760 gtgggaccaaaataaaaatatgaaat 33232785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 99 - 168
Target Start/End: Original strand, 669678 - 669747
Alignment:
Q  99 tgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggacca 168  Q
    ||||||||||||| ||  |||||||||||| |||||| ||||||||||||  |||||| ||| |||||||    
T  669678 tgagggaccaaaatgtgagttttattaattatgggaccaaaatgaaaattgaaaattaattgggggacca 669747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 55 - 156
Target Start/End: Complemental strand, 23201973 - 23201872
Alignment:
Q  55 ttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaat 154  Q
    ||||| |||||| || ||||||||||| ||| ||||||||||  ||||||||||||| |    ||||||||| |||||||| ||||| ||||  ||||||    
T  23201973 ttaaacttaacggttgggatttatttggcaaacggaggaaaaggtgagggaccaaaatgccatttttattaaatgtgggaccaaaataaaaacatgaaat 23201874  T
Q  155 ta 156  Q
    ||    
T  23201873 ta 23201872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 71 - 144
Target Start/End: Complemental strand, 50547017 - 50546944
Alignment:
Q  71 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaa 144  Q
    ||||||||||| ||| ||| |||||| ||||||||| |||| |    |||||||||||||||||||||||||||    
T  50547017 ggatttatttggcaaacggtggaaaagatgagggactaaaacgccatttttattaattgtgggactaaaatgaa 50546944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 156
Target Start/End: Complemental strand, 33231547 - 33231415
Alignment:
Q  25 taaggttggtccaccatagacgttttggagttaaagttaacgatt-tggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttat 123  Q
    ||||||| ||||||||||||| |||  | |||||| ||||| | | || ||||||||| ||| ||| | |||| ||||||||| ||||      ||||||    
T  33231547 taaggtttgtccaccatagacatttgagggttaaacttaacaagtatgaatttatttggcaaacggtgaaaaagatgagggactaaaacaccatttttat 33231448  T
Q  124 taattgtgggactaaaatgaaaatttgaaatta 156  Q
    |||||||||||||||||||||||  ||||||||    
T  33231447 taattgtgggactaaaatgaaaacatgaaatta 33231415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 165
Target Start/End: Original strand, 53435693 - 53435852
Alignment:
Q  7 gtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgattt-ggatttatttgacaatcggaggaaaaaatgaggg 104  Q
    ||||||| ||||| |||||||||||||||| ||||||||| |||   ||||||| |||||  |   ||||||||||||| | |||||| |||  ||||||    
T  53435693 gtctacggtggaccactcttaaggttggtctaccatagacatttaa-agttaaacttaaccgtcaaggatttatttgaccaacggaggtaaacttgaggg 53435791  T
Q  105 accaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgaggga 165  Q
     ||||||  |  ||||||||| || |||||| |||||||||| ||||||||| || |||||    
T  53435792 gccaaaacatgagttttattacttatgggaccaaaatgaaaacttgaaattaattaaggga 53435852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 158
Target Start/End: Complemental strand, 54484444 - 54484336
Alignment:
Q  52 gagttaaagttaacgatttg-gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaat-gaaaattt 149  Q
    ||||||||||||||  |||| |||||||||| ||| | ||||||||  | ||||||||||| | |||||||||||||| ||| || |||||  ||||||     
T  54484444 gagttaaagttaacagtttgagatttatttggcaaacagaggaaaattttagggaccaaaacgaacgttttattaattatggtaccaaaataaaaaattg 54484345  T
Q  150 gaaattatt 158  Q
    |||||||||    
T  54484344 gaaattatt 54484336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 29 - 146
Target Start/End: Original strand, 50548188 - 50548303
Alignment:
Q  29 gttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaatt 128  Q
    |||||||||| |||||| |||  ||||||||||| |||    ||||||||||| ||| | ||||||||  |||||||| |||| ||   | |||||||||    
T  50548188 gttggtccacaatagacattt--gagttaaagttgacggaaaggatttatttggcaaacagaggaaaatgtgagggactaaaacgttattcttattaatt 50548285  T
Q  129 gtgggactaaaatgaaaa 146  Q
    ||||||| ||||||||||    
T  50548286 gtgggaccaaaatgaaaa 50548303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 148
Target Start/End: Complemental strand, 40723390 - 40723262
Alignment:
Q  19 cactcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgt 118  Q
    |||||||||||||||||||||||| ||  ||||  |||||| |||||  | ||||||||||||||   |||||  |||  | |||||||||||  |  ||    
T  40723390 cactcttaaggttggtccaccatatac-atttgaggttaaacttaacagtatggatttatttgaccgacggagataaacctaagggaccaaaacatgagt 40723292  T
Q  119 tttattaattgtgggactaaaatgaaaatt 148  Q
    ||||||| || |||||| ||||||||||||    
T  40723291 tttattagttatgggaccaaaatgaaaatt 40723262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 13533195 - 13533350
Alignment:
Q  1 aataaggtctacgatggacactct-taaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaat 99  Q
    ||||||||||| | |||||  ||| ||| ||||||||||||||||| ||| | ||||||| |||||  | ||||||||||||||   |||||  |||  |    
T  13533195 aataaggtctatggtggactatctataatgttggtccaccatagacattt-gaagttaaatttaacagtctggatttatttgaccgacggagacaaacgt 13533293  T
Q  100 gagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaatta 156  Q
    ||||||||||||  |  ||||| ||| || ||| ||||| ||||||| |||||||||    
T  13533294 gagggaccaaaacatgagtttttttagttatggaactaagatgaaaacttgaaatta 13533350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 95; Significance: 2e-46; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 28562744 - 28562925
Alignment:
Q  1 aataaggtctacgatggacactct-taaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaat 99  Q
    ||||||||||| | |||||  ||| ||| |||||||||||||| |  ||| ||| ||||| |||||  | |||||||||||||||| ||||||||||| |    
T  28562744 aataaggtctatggtggactatctataatgttggtccaccatatatatttggga-ttaaacttaacagtctggatttatttgacaaacggaggaaaaagt 28562842  T
Q  100 gagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 182  Q
    |||||||||||||||| |||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  28562843 gagggaccaaaaggtatgttttattaattatgggaccaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 28562925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 11317320 - 11317484
Alignment:
Q  19 cactcttaaggttggtccaccatagacgtt-ttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacg 117  Q
    ||||||||||||||||| ||||||||| |  || |||||||| |||||  |  ||||||||||| ||| ||||||||||| |||||||||||||  || |    
T  11317320 cactcttaaggttggtctaccatagacatcatttgagttaaacttaactgtgaggatttatttgccaaacggaggaaaaattgagggaccaaaatatatg 11317419  T
Q  118 ttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 182  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  11317420 ttttattaattgtgggaccaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 11317484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 72 - 181
Target Start/End: Original strand, 43034477 - 43034586
Alignment:
Q  72 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattg 171  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||    
T  43034477 gatttatttgacaaacggaggaaaaagtgagggaccaaaaggtacgttttattaattgtgagattaaaatgaaaacttgaaattatttgagggaccattg 43034576  T
Q  172 aatcaaataa 181  Q
    ||||||||||    
T  43034577 aatcaaataa 43034586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 43033244 - 43033082
Alignment:
Q  19 cactcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgt 118  Q
    ||||||||||||||||| ||||||||| |||  | |||||| |||||     ||||||||||| ||| ||||||||||| ||||||||||||||||||||    
T  43033244 cactcttaaggttggtctaccatagacatttgag-gttaaacttaacatcgaggatttatttggcaaacggaggaaaaagtgagggaccaaaaggtacgt 43033146  T
Q  119 tttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 182  Q
    ||||||||||||||||| |||||||||| |||||||||||| ||||| ||||| ||||||||||    
T  43033145 tttattaattgtgggaccaaaatgaaaacttgaaattatttaagggatcattggatcaaataag 43033082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 32469313 - 32469148
Alignment:
Q  19 cactcttaaggttggtccaccatagacgtt-ttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtac- 116  Q
    ||||||||| |||||||||||||| || |  || |||||||| ||||| ||  ||||||||||| ||| ||||||||||| ||| ||||||||||||||     
T  32469313 cactcttaaagttggtccaccatatacataatttgagttaaacttaactataaggatttatttggcaa-cggaggaaaaagtgaaggaccaaaaggtaca 32469215  T
Q  117 -gttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 182  Q
     ||||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||    
T  32469214 cgttttattaattgtgggatcaaaatgaaaacttgaaattatttgagggaccattgaatcaaataag 32469148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 17460619 - 17460800
Alignment:
Q  1 aataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaat 99  Q
    ||||||||||||||| ||| ||| ||||| |||||||||||||||| |||   |||||||||||||| |  |||||||||||  || ||||||||||  |    
T  17460619 aataaggtctacgatagaccacttttaagattggtccaccatagacatttaa-agttaaagttaacggtcgggatttatttgggaaacggaggaaaattt 17460717  T
Q  100 gagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 182  Q
    |||||||||||| ||||||||||||||||||||||  |||||||||| ||||||||| ||   ||||||||| ||||||||||    
T  17460718 gagggaccaaaacgtacgttttattaattgtgggatcaaaatgaaaacttgaaattaattagaggaccattggatcaaataag 17460800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 73 - 184
Target Start/End: Complemental strand, 28561477 - 28561366
Alignment:
Q  73 atttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattga 172  Q
    ||||||||||||| || |||||||  |||||||||||||| |||||||||||||||||| ||| |||||||||| || ||||||||| ||||||||||||    
T  28561477 atttatttgacaaacgtaggaaaaggtgagggaccaaaagatacgttttattaattgtgagaccaaaatgaaaacttaaaattatttaagggaccattga 28561378  T
Q  173 atcaaataagtc 184  Q
    ||||||||||||    
T  28561377 atcaaataagtc 28561366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 11316114 - 11315933
Alignment:
Q  1 aataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaat 99  Q
    ||||||||||||| ||||| | | ||||||||| |||||||||||| ||| ||| ||||| |||||     ||||||||||| ||| ||||||||||  |    
T  11316114 aataaggtctacggtggaccatttttaaggttgatccaccatagacattt-ggaattaaacttaacagccgggatttatttggcaaacggaggaaaacct 11316016  T
Q  100 gagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 182  Q
    |||||||  ||| ||||||||||||||||||||||| |||||||||| ||||||||||||  ||||||| ||||| |||||||    
T  11316015 gagggacttaaacgtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttaggggaccaatgaattaaataag 11315933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 32470510 - 32470691
Alignment:
Q  1 aataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaat 99  Q
    ||||||||||||||||||| | | ||||||||  |||||||||||| ||| ||||||||| |||||     ||||||||||||||| |||||||||| ||    
T  32470510 aataaggtctacgatggaccatttttaaggtttatccaccatagacattt-ggagttaaacttaacagccgggatttatttgacaaacggaggaaaacat 32470608  T
Q  100 gagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 182  Q
    |||| ||  ||| ||||||||||||||||||||||| ||||| |||| ||||||||||||  ||||| | || ||||||||||    
T  32470609 gaggaacttaaacgtacgttttattaattgtgggaccaaaataaaaacttgaaattatttaggggactaatggatcaaataag 32470691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 71 - 181
Target Start/End: Original strand, 42641866 - 42641975
Alignment:
Q  71 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccatt 170  Q
    ||||||||||| ||| ||||  ||||| || ||||||||||||| ||||||||||||| |||||| ||||| ||||||||||||||||||||||||||||    
T  42641866 ggatttatttggcaaacggaa-aaaaagtgggggaccaaaaggtgcgttttattaattatgggaccaaaataaaaatttgaaattatttgagggaccatt 42641964  T
Q  171 gaatcaaataa 181  Q
    |||||||||||    
T  42641965 gaatcaaataa 42641975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 87 - 182
Target Start/End: Original strand, 7437782 - 7437877
Alignment:
Q  87 cggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 182  Q
    ||||||||||| |||||||||||||  |||||||||||||||||||||| |||||||||| |||||||||||||||  ||||||| ||||||||||    
T  7437782 cggaggaaaaattgagggaccaaaatatacgttttattaattgtgggaccaaaatgaaaacttgaaattatttgagcaaccattggatcaaataag 7437877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 71 - 180
Target Start/End: Complemental strand, 7436577 - 7436469
Alignment:
Q  71 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccatt 170  Q
    ||||||||||||||| |||| |||||| ||||| |||||||||||  ||||||||||||| |||| ||||| |||| |||||||||||||||||||||||    
T  7436577 ggatttatttgacaaacggaagaaaaattgagg-accaaaaggtatattttattaattgtaggaccaaaataaaaacttgaaattatttgagggaccatt 7436479  T
Q  171 gaatcaaata 180  Q
    | ||||||||    
T  7436478 ggatcaaata 7436469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 6030422 - 6030586
Alignment:
Q  19 cactcttaaggttggtccaccatagacgt--tttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtac 116  Q
    ||||||||||||||||||||| ||||| |  ||||| ||||||||||||  ||  |||||||||| |||   |||||||| |||| ||| ||||| ||||    
T  6030422 cactcttaaggttggtccaccgtagacatcatttgg-gttaaagttaactgttgagatttatttggcaaatagaggaaaatatgaaggatcaaaacgtac 6030520  T
Q  117 gttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 182  Q
     ||| |||||||||||||  |||||||||| || |||||||||||||||| |||| ||||||||||    
T  6030521 ttttaattaattgtgggatcaaaatgaaaacttcaaattatttgagggactattggatcaaataag 6030586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 73 - 182
Target Start/End: Complemental strand, 17459362 - 17459253
Alignment:
Q  73 atttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattga 172  Q
    ||||||||| ||| ||||||||||| ||||||||  ||| ||||||||||||||||||| ||| |||||||||| |||||||||||| |||||| | ||     
T  17459362 atttatttggcaaacggaggaaaaagtgagggacttaaacgtacgttttattaattgtgtgaccaaaatgaaaacttgaaattatttaagggactaatgg 17459263  T
Q  173 atcaaataag 182  Q
    ||||||||||    
T  17459262 atcaaataag 17459253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 191
Target Start/End: Complemental strand, 11547824 - 11547650
Alignment:
Q  19 cactcttaaggttggtccaccatagacgt--tttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtac 116  Q
    ||||| |||||||||||||  |||||| |  ||||| |||||| |||||  |  ||||||||||||||| || |||||||||||||||   ||||  |      
T  11547824 cactcctaaggttggtccatgatagacatcatttggggttaaacttaacagtcaggatttatttgacaaacgaaggaaaaaatgaggggttaaaacatgt 11547725  T
Q  117 gttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataagtcatttatt 191  Q
    |||||||||||| || ||| |||||||||| |||||||||||| | |||||| | ||||||||||| ||||||||    
T  11547724 gttttattaattatgagaccaaaatgaaaacttgaaattatttaaaggaccaataaatcaaataagccatttatt 11547650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 156
Target Start/End: Complemental strand, 29219550 - 29219411
Alignment:
Q  19 cactcttaaggttggtccaccatagacgt--tttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtac 116  Q
    |||| ||||| |||||||||||||||| |  ||||| |||||| |||||  || ||||||||||| ||| ||||||||||  |||||||| |||| |       
T  29219550 cacttttaagattggtccaccatagacatcatttggggttaaacttaacagttgggatttatttggcaaacggaggaaaaggtgagggactaaaacgcca 29219451  T
Q  117 gttttattaattgtgggactaaaatgaaaatttgaaatta 156  Q
     |||||||||||||||||| ||||||||||  ||||||||    
T  29219450 tttttattaattgtgggaccaaaatgaaaacatgaaatta 29219411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 156
Target Start/End: Complemental strand, 29332849 - 29332710
Alignment:
Q  19 cactcttaaggttggtccaccatagacgt--tttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtac 116  Q
    |||| ||||| |||||||||||||||| |  ||||| |||||| |||||  || ||||||||||| ||| ||||||||||  |||||||| |||| |       
T  29332849 cacttttaagattggtccaccatagacatcatttggggttaaacttaacagttgggatttatttggcaaacggaggaaaaggtgagggactaaaacgcca 29332750  T
Q  117 gttttattaattgtgggactaaaatgaaaatttgaaatta 156  Q
     |||||||||||||||||| ||||||||||  ||||||||    
T  29332749 tttttattaattgtgggaccaaaatgaaaacatgaaatta 29332710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 1083169 - 1083014
Alignment:
Q  1 aataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaat 99  Q
    |||||||||||| || ||| ||| ||||||||| |||||||||||  ||| | |||||||||||||  || ||||||| ||| ||| ||||| |||| ||    
T  1083169 aataaggtctacaatagaccacttttaaggttgatccaccatagatatttag-agttaaagttaacacttgggatttaattggcaaacggagaaaaagat 1083071  T
Q  100 gagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaatta 156  Q
    || |||||||||      ||||||||| |||||||| ||||||||||| ||||||||    
T  1083070 gacggaccaaaacaccatttttattaaatgtgggaccaaaatgaaaatatgaaatta 1083014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 90 - 166
Target Start/End: Original strand, 12359703 - 12359779
Alignment:
Q  90 aggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggac 166  Q
    |||||||||||||||||||||| |    ||||||||||||||||||||||| |||||  ||||||||||| ||||||    
T  12359703 aggaaaaaatgagggaccaaaacgccaattttattaattgtgggactaaaacgaaaacatgaaattatttaagggac 12359779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 72 - 182
Target Start/End: Original strand, 36011648 - 36011757
Alignment:
Q  72 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattg 171  Q
    |||||||||| ||| ||||  |||||||||||||| |||| |||| ||||||||||| ||||| ||||||| ||| || ||||||||| | ||| || ||    
T  36011648 gatttatttggcaaacggattaaaaaatgagggactaaaacgtacattttattaattatgggattaaaatg-aaacttaaaattatttaaaggatcaatg 36011746  T
Q  172 aatcaaataag 182  Q
     ||||||||||    
T  36011747 gatcaaataag 36011757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 168
Target Start/End: Original strand, 2277502 - 2277571
Alignment:
Q  99 tgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggacca 168  Q
    |||||||||||||  || ||||||||| || |||||| |||||||||| | |||||||||||||||||||    
T  2277502 tgagggaccaaaacataagttttattacttatgggaccaaaatgaaaactggaaattatttgagggacca 2277571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 71 - 156
Target Start/End: Complemental strand, 6030716 - 6030631
Alignment:
Q  71 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaatta 156  Q
    ||||||||||| ||| ||||||||||||| ||| || |||| |    |||||||||||||||||||||||||||||  ||||||||    
T  6030716 ggatttatttggcaaacggaggaaaaaataaggaactaaaacgccaattttattaattgtgggactaaaatgaaaacatgaaatta 6030631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 71 - 156
Target Start/End: Complemental strand, 44191247 - 44191162
Alignment:
Q  71 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaatta 156  Q
    ||||||||||||||| | | |||||  ||||||||| |||| | |  |||||||||||||||||||||||||||||  ||||||||    
T  44191247 ggatttatttgacaaacagtggaaacgatgagggactaaaatgcaatttttattaattgtgggactaaaatgaaaacatgaaatta 44191162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 31 - 156
Target Start/End: Original strand, 18616969 - 18617096
Alignment:
Q  31 tggtccaccatagacgt--tttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaatt 128  Q
    ||||||||||||||| |  ||||| |||||| ||||   || ||||||||||| ||| ||||||||||  |||||||| |||| |    |||||||||||    
T  18616969 tggtccaccatagacatcatttggggttaaacttaatagttgggatttatttggcaaacggaggaaaaggtgagggactaaaacgccatttttattaatt 18617068  T
Q  129 gtgggactaaaatgaaaatttgaaatta 156  Q
    ||||||| ||||||||||  ||||||||    
T  18617069 gtgggaccaaaatgaaaacatgaaatta 18617096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 90 - 181
Target Start/End: Complemental strand, 36010669 - 36010578
Alignment:
Q  90 aggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataa 181  Q
    |||||||| |||||||| ||||  |||||||||||||| ||  ||| ||||||||||  ||||||||||| |||||| | || |||||||||    
T  36010669 aggaaaaagtgagggactaaaatatacgttttattaatcgtaagaccaaaatgaaaacatgaaattatttaagggactaatggatcaaataa 36010578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 168
Target Start/End: Complemental strand, 34147289 - 34147150
Alignment:
Q  29 gttggtccaccatagacgttttggagttaaagttaacgatt-tggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaat 127  Q
    ||||||||||||||||| ||| || ||||||||||||     ||||||||||||||   ||||||  ||  |||||||||||||  |  ||||||||| |    
T  34147289 gttggtccaccatagacatttggg-gttaaagttaacacccatggatttatttgactggcggaggtgaacttgagggaccaaaacatgagttttattact 34147191  T
Q  128 tgtgggactaaaatgaaaatttgaaattatttgagggacca 168  Q
    | |||||| |||||||||| |  ||||||||||||||||||    
T  34147190 tatgggaccaaaatgaaaactgaaaattatttgagggacca 34147150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 118 - 156
Target Start/End: Original strand, 29220928 - 29220966
Alignment:
Q  118 ttttattaattgtgggactaaaatgaaaatttgaaatta 156  Q
    |||||||||||||||||| ||||||||||| ||||||||    
T  29220928 ttttattaattgtgggaccaaaatgaaaatatgaaatta 29220966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 118 - 156
Target Start/End: Original strand, 29334227 - 29334265
Alignment:
Q  118 ttttattaattgtgggactaaaatgaaaatttgaaatta 156  Q
    |||||||||||||||||| ||||||||||| ||||||||    
T  29334227 ttttattaattgtgggaccaaaatgaaaatatgaaatta 29334265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 118 - 168
Target Start/End: Complemental strand, 37957013 - 37956963
Alignment:
Q  118 ttttattaattgtgggactaaaatgaaaatttgaaattatttgagggacca 168  Q
    |||||||| || |||||| |||||||||||||||||||| || ||||||||    
T  37957013 ttttattacttatgggaccaaaatgaaaatttgaaattaattaagggacca 37956963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 317
Target Start/End: Original strand, 41099465 - 41099519
Alignment:
Q  263 gaaaattgttcttcccacatcaaaaattgctatgacacacctggaaattacacat 317  Q
    |||||||| | ||||||| | | |||||||||||| |||||||||||||||||||    
T  41099465 gaaaattgcttttcccactttagaaattgctatgaaacacctggaaattacacat 41099519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 168
Target Start/End: Complemental strand, 2276364 - 2276295
Alignment:
Q  99 tgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggacca 168  Q
    |||||||||||||  |  ||||||||| || | ||||||||||||||| |  ||||||||||||||||||    
T  2276364 tgagggaccaaaacatgagttttattacttataggactaaaatgaaaactgaaaattatttgagggacca 2276295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 168
Target Start/End: Original strand, 34148393 - 34148462
Alignment:
Q  99 tgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggacca 168  Q
    |||||||||||||  |  ||||||||| || ||| ||||||||||||| |  ||||||||||||||||||    
T  34148393 tgagggaccaaaacatgagttttattatttatggaactaaaatgaaaactgaaaattatttgagggacca 34148462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 130 - 170
Target Start/End: Original strand, 23233760 - 23233800
Alignment:
Q  130 tgggactaaaatgaaaatttgaaattatttgagggaccatt 170  Q
    |||||| |||||||||||||| ||||| |||||||||||||    
T  23233760 tgggaccaaaatgaaaatttgtaattagttgagggaccatt 23233800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 93; Significance: 4e-45; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 32798484 - 32798648
Alignment:
Q  19 cactcttaaggttggtccaccatagacgtt-ttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacg 117  Q
    |||||||||||||| |||||||||||| |  || |||||||| |||||  |  ||||||||||||||| ||||| ||||| |||||||| ||||||||||    
T  32798484 cactcttaaggttgatccaccatagacatcatttgagttaaacttaaccgtgaggatttatttgacaaacggagaaaaaattgagggactaaaaggtacg 32798583  T
Q  118 ttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 182  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||    
T  32798584 ttttattaattgtgggaccaaaatgaaaacttgaaattatttgagggaccattgcatcaaataag 32798648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 24 - 182
Target Start/End: Original strand, 44076319 - 44076479
Alignment:
Q  24 ttaaggttggtccaccatagacgt--tttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgtttt 121  Q
    |||| |||| |||||||||||| |  ||||| |||||| |||||  |  ||||||||||| ||| ||||||||||| ||||| |||||||| ||||||||    
T  44076319 ttaatgttgttccaccatagacatcatttggggttaaacttaactgtagggatttatttggcaaacggaggaaaaattgaggcaccaaaagatacgtttt 44076418  T
Q  122 attaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 182  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||    
T  44076419 attaattgtgggaccaaaataaaaatttgaaattatttgagggaccattggatcaaataag 44076479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 42872143 - 42872305
Alignment:
Q  19 cactcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgt 118  Q
    ||||||||||||||||| ||||||||| |||  | ||||||||||||  |  ||||||||||||||| ||||||||||| ||| |||| |||| ||||||    
T  42872143 cactcttaaggttggtctaccatagacatttgag-gttaaagttaaccgtcaggatttatttgacaaacggaggaaaaagtgaaggactaaaacgtacgt 42872241  T
Q  119 tttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 182  Q
    |||||| ||| || || ||||||||||| || ||||||||| ||||||||||| ||||||||||    
T  42872242 tttattcattatgagattaaaatgaaaacttaaaattatttaagggaccattggatcaaataag 42872305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 71 - 182
Target Start/End: Complemental strand, 26696643 - 26696532
Alignment:
Q  71 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccatt 170  Q
    ||||||||||| |||  |||||||||| ||||||||||||| ||| ||||||||||||||||||| |||||||||| ||||||||| ||  |||||||||    
T  26696643 ggatttatttggcaaatggaggaaaaagtgagggaccaaaatgtatgttttattaattgtgggaccaaaatgaaaacttgaaattaattaggggaccatt 26696544  T
Q  171 gaatcaaataag 182  Q
    ||||||||||||    
T  26696543 gaatcaaataag 26696532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 52 - 168
Target Start/End: Original strand, 28420159 - 28420276
Alignment:
Q  52 gagttaaagttaacgatttg-gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttg 150  Q
    ||||||||||||||  |||| |||||||||||||| |||||||||||||||||||| |||| ||  |||||||||||| |||||| |||||||||| |||    
T  28420159 gagttaaagttaacagtttgagatttatttgacaaacggaggaaaaaatgagggactaaaacgtgtgttttattaattatgggaccaaaatgaaaaattg 28420258  T
Q  151 aaattatttgagggacca 168  Q
    ||||||||| ||||||||    
T  28420259 aaattatttaagggacca 28420276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 181
Target Start/End: Complemental strand, 41629889 - 41629709
Alignment:
Q  1 aataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaat 99  Q
    |||||||| ||||||| || ||| ||||||||||| |||||||||| |||||||||| ||||||||| |  ||||||||||| ||| |||| |||||  |    
T  41629889 aataaggtatacgatgaaccacttttaaggttggttcaccatagac-ttttggagttcaagttaacggtcgggatttatttggcaaacggaagaaaactt 41629791  T
Q  100 gagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataa 181  Q
    |||||| |||||  |||||||||||||||||| ||| ||||| |||| ||||||||||||  ||||| | || |||||||||    
T  41629790 gagggatcaaaatatacgttttattaattgtgagaccaaaataaaaacttgaaattatttaggggactaatggatcaaataa 41629709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 32694011 - 32693830
Alignment:
Q  1 aataaggtctacgat-ggacactcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaat 99  Q
    ||||||||||| ||| || |||| |||||||||||||| |||| || |||   |||||||||||||  || ||||||||||| ||| ||||||||||  |    
T  32694011 aataaggtctatgataggccacttttaaggttggtccatcatatacatttaa-agttaaagttaactgttgggatttatttggcaaacggaggaaaatct 32693913  T
Q  100 gagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 182  Q
    || ||||||||  ||| ||||||||||||||||||| |||||||||| || |||||| ||   ||||||||||||||||||||    
T  32693912 gaaggaccaaagcgtatgttttattaattgtgggaccaaaatgaaaacttaaaattaattagaggaccattgaatcaaataag 32693830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 22551169 - 22551022
Alignment:
Q  19 cactcttaaggttggtccaccatagacgttttggagttaaagttaacgattt-ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacg 117  Q
    |||| |||||||| |||||||||||| | ||||| |||||| ||||| ||   ||||||||||| |||  |||| ||||| |||||||||||||| ||||    
T  22551169 cacttttaaggtttgtccaccataga-gatttggggttaaacttaacaatccaggatttatttggcaaatggag-aaaaagtgagggaccaaaagatacg 22551072  T
Q  118 ttttattaattgtgggactaaaatgaaaatttgaaattatttgagggacc 167  Q
    |||||||||||||||||| ||||| |||| ||||||||||||||||||||    
T  22551071 ttttattaattgtgggaccaaaataaaaacttgaaattatttgagggacc 22551022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 34 - 182
Target Start/End: Complemental strand, 4810619 - 4810469
Alignment:
Q  34 tccaccatagacgt--tttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtg 131  Q
    |||||||||||| |  ||||| ||||||||||||  |  ||||||||||| ||| ||||| ||||  ||| |||||||||  ||||||||||||||| ||    
T  4810619 tccaccatagacatcatttggggttaaagttaaccgtcgggatttatttggcaaacggagaaaaatttgaaggaccaaaacatacgttttattaattatg 4810520  T
Q  132 ggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 182  Q
    |||| ||||| ||||||||||| ||||||||||||||||  ||||||||||    
T  4810519 ggaccaaaataaaaatttgaaagtatttgagggaccattagatcaaataag 4810469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 22 - 182
Target Start/End: Original strand, 32695229 - 32695391
Alignment:
Q  22 tcttaaggttggtccaccatagacgt--tttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgtt 119  Q
    ||||||| ||||| |||||||||| |  ||||| |||||| |||||| |  ||| | ||||| ||| | ||||||||  ||| ||||  ||| |||||||    
T  32695229 tcttaagattggttcaccatagacatcatttggggttaaacttaacggtcaggactaatttggcaaacagaggaaaacgtgaaggacttaaacgtacgtt 32695328  T
Q  120 ttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 182  Q
    |||||||||||| ||| |||||||||| ||||||||||||||||||||| |||||||||||||    
T  32695329 ttattaattgtgagaccaaaatgaaaacttgaaattatttgagggaccaatgaatcaaataag 32695391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 71 - 182
Target Start/End: Original strand, 41630129 - 41630240
Alignment:
Q  71 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccatt 170  Q
    |||||||||| |||| |  || ||||| ||||||||  ||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||| ||||||    
T  41630129 ggatttatttaacaaacatagaaaaaattgagggacttaaaggtacgttttattaattgtgagactaaaatgaaaatttaaaattatttaaggaaccatt 41630228  T
Q  171 gaatcaaataag 182  Q
    | ||||||||||    
T  41630229 ggatcaaataag 41630240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 42870997 - 42870808
Alignment:
Q  1 aataaggtctacgatggac-actcttaaggttggtccaccatagacgt--tttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaa 97  Q
    ||||||||||||| ||||| ||||||||| ||||||||| |||||| |  ||||| |||||| |||||  |  ||||| ||| | ||| | || ||||||    
T  42870997 aataaggtctacggtggaccactcttaagattggtccacaatagacatcttttggggttaaacttaacagtcaggattcattcggcaaacagacgaaaaa 42870898  T
Q  98 atgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataagtcatt 187  Q
     | |||||| |||| ||||||||||||||||||||||| |||||||||| ||||||||||||  |  ||||||| |||||||||| ||||    
T  42870897 gtaagggactaaaacgtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttaggaaaccattggatcaaataagccatt 42870808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 45281141 - 45281304
Alignment:
Q  19 cactcttaaggttggtccaccatagacgt--tttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtac 116  Q
    ||||||||||||||||||||| ||||| |  |||||| |||||||||||  || ||||||||||| |||  |||||||||  ||| ||| |||||  ||     
T  45281141 cactcttaaggttggtccaccgtagacatcatttgga-ttaaagttaactgttgggatttatttggcaaatggaggaaaatctgaaggatcaaaacatat 45281239  T
Q  117 gttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 182  Q
     ||||||||||||| |||| |||||||||| ||||||||||||||||||| |||| ||||||||||    
T  45281240 -ttttattaattgttggaccaaaatgaaaacttgaaattatttgagggactattggatcaaataag 45281304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 52 - 168
Target Start/End: Complemental strand, 28418937 - 28418820
Alignment:
Q  52 gagttaaagttaacgatttg-gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttg 150  Q
    ||||||||||||||  |||| |||||||||| ||| ||||||||||| |||||||| |||| ||  |||||||||||| |||||| |||||||||| |||    
T  28418937 gagttaaagttaacagtttgagatttatttggcaaacggaggaaaaagtgagggactaaaacgtgtgttttattaattatgggaccaaaatgaaaaattg 28418838  T
Q  151 aaattatttgagggacca 168  Q
    ||||||||| ||||||||    
T  28418837 aaattatttaagggacca 28418820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 3 - 159
Target Start/End: Complemental strand, 45279859 - 45279703
Alignment:
Q  3 taaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatga 101  Q
    ||||||||||||| ||| ||| |||||  |||||||||||| || ||| | |||||||||||||  |  ||||||||||| ||| || |  ||||  |||    
T  45279859 taaggtctacgatagaccacttttaagactggtccaccatatacatttag-agttaaagttaaccgtcgggatttatttgccaaacgaaaaaaaacttga 45279761  T
Q  102 gggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattattt 159  Q
    |||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||    
T  45279760 gggaccaaaacgtacgttttattaattgtatgactaaaatgaaaatttgaaattattt 45279703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 72 - 159
Target Start/End: Complemental strand, 6397893 - 6397806
Alignment:
Q  72 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattattt 159  Q
    |||||||||| ||| ||||| |||||||||||||| |||| ||| ||||||||||||||||||| ||||||||||| |||||||||||    
T  6397893 gatttatttggcaaacggagaaaaaaatgagggactaaaatgtaagttttattaattgtgggaccaaaatgaaaatatgaaattattt 6397806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 29 - 146
Target Start/End: Original strand, 26697796 - 26697912
Alignment:
Q  29 gttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaatt 128  Q
    |||||||||||||| || ||| || |||||| ||||| ||| ||||||||| |||||  ||| |||||| |||||||| |||| ||||||||||||||||    
T  26697796 gttggtccaccataaacatttggg-gttaaacttaacaattaggatttattcgacaaaaggaagaaaaagtgagggactaaaacgtacgttttattaatt 26697894  T
Q  129 gtgggactaaaatgaaaa 146  Q
     |||||||||||||||||    
T  26697895 atgggactaaaatgaaaa 26697912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 73 - 182
Target Start/End: Complemental strand, 30786785 - 30786676
Alignment:
Q  73 atttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattga 172  Q
    ||||||||| ||| ||||| ||||| ||||||| |||||  ||||||||||||||| || ||  |||||||||| || ||||||||||| ||||||||||    
T  30786785 atttatttggcaaacggagaaaaaagtgagggatcaaaatatacgttttattaattatgtgatcaaaatgaaaacttaaaattatttgaaggaccattga 30786686  T
Q  173 atcaaataag 182  Q
    ||||||||||    
T  30786685 atcaaataag 30786676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 42100041 - 42100196
Alignment:
Q  1 aataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaat 99  Q
    ||||||||||||||||||| ||| ||||||||||||||||| |||| ||| | |||||||||||||  |  ||| ||||||| ||| |||||||||| ||    
T  42100041 aataaggtctacgatggaccacttttaaggttggtccaccaaagacattt-gaagttaaagttaacagtcgggaattatttggcaaacggaggaaaatat 42100139  T
Q  100 gagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaatta 156  Q
    |||||| ||||| |    |||||||||||||| ||| ||||||||||  ||||||||    
T  42100140 gagggatcaaaacgccatttttattaattgtgagaccaaaatgaaaacatgaaatta 42100196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 71 - 182
Target Start/End: Complemental strand, 8570229 - 8570118
Alignment:
Q  71 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccatt 170  Q
    ||||||||||| ||| | |||  |||| ||||||||||||| |||||||||||||||||| |||| ||||||||||  |||||||| ||  |||||||||    
T  8570229 ggatttatttggcaaacagagacaaaagtgagggaccaaaacgtacgttttattaattgtaggaccaaaatgaaaacgtgaaattaattaggggaccatt 8570130  T
Q  171 gaatcaaataag 182  Q
    | ||||||||||    
T  8570129 ggatcaaataag 8570118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 87 - 182
Target Start/End: Complemental strand, 32797233 - 32797138
Alignment:
Q  87 cggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 182  Q
    ||||||||||  ||||||||  ||| ||||||||||||||||||||||| |||||||||| |||||||||||| |||||||| |  ||||||||||    
T  32797233 cggaggaaaacctgagggacttaaacgtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttaagggaccaatagatcaaataag 32797138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 70 - 142
Target Start/End: Complemental strand, 29103599 - 29103527
Alignment:
Q  70 tggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatg 142  Q
    |||||||||||  ||||||||||||||||||||||||  ||| ||||||||||||||||||||||| ||||||    
T  29103599 tggatttatttagcaatcggaggaaaaaatgagggactcaaatgtacgttttattaattgtgggaccaaaatg 29103527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 71 - 182
Target Start/End: Original strand, 30787605 - 30787716
Alignment:
Q  71 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccatt 170  Q
    ||||||||||| ||| |||| |||||| |||||||||||||  ||  ||||||||||| |||||| |||||||||| || |||||||||||| || ||||    
T  30787605 ggatttatttggcaaacggaagaaaaagtgagggaccaaaatatatattttattaattatgggaccaaaatgaaaacttaaaattatttgagagaacatt 30787704  T
Q  171 gaatcaaataag 182  Q
      ||||||||||    
T  30787705 agatcaaataag 30787716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 72 - 182
Target Start/End: Original strand, 212718 - 212828
Alignment:
Q  72 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattg 171  Q
    |||||||||||||| || |||||||| |||||||| ||||     ||||| ||||||||||||| ||||||||||| |||||||||||| ||||| | ||    
T  212718 gatttatttgacaaacgaaggaaaaagtgagggactaaaacacctgtttttttaattgtgggacgaaaatgaaaatctgaaattatttgggggactaatg 212817  T
Q  172 aatcaaataag 182  Q
     ||||||||||    
T  212818 gatcaaataag 212828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 72 - 182
Target Start/End: Complemental strand, 239536 - 239426
Alignment:
Q  72 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattg 171  Q
    |||||||||||||| || |||||||| |||||||| ||||     ||||| ||||||||||||| ||||||||||| |||||||||||| ||||| | ||    
T  239536 gatttatttgacaaacgaaggaaaaagtgagggactaaaacacctgtttttttaattgtgggacgaaaatgaaaatctgaaattatttgggggactaatg 239437  T
Q  172 aatcaaataag 182  Q
     ||||||||||    
T  239436 gatcaaataag 239426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 72 - 182
Target Start/End: Original strand, 726341 - 726451
Alignment:
Q  72 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattg 171  Q
    |||||||||||||| || |||||||| |||||||| ||||     ||||| ||||||||||||| ||||||||||| |||||||||||| ||||| | ||    
T  726341 gatttatttgacaaacgaaggaaaaagtgagggactaaaacacctgtttttttaattgtgggacgaaaatgaaaatctgaaattatttgggggactaatg 726440  T
Q  172 aatcaaataag 182  Q
     ||||||||||    
T  726441 gatcaaataag 726451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 72 - 182
Target Start/End: Complemental strand, 792891 - 792781
Alignment:
Q  72 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattg 171  Q
    |||||||||||||| || |||||||| |||||||| ||||     ||||| ||||||||||||| ||||||||||| |||||||||||| ||||| | ||    
T  792891 gatttatttgacaaacgaaggaaaaagtgagggactaaaacacctgtttttttaattgtgggacgaaaatgaaaatctgaaattatttgggggactaatg 792792  T
Q  172 aatcaaataag 182  Q
     ||||||||||    
T  792791 gatcaaataag 792781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 72 - 182
Target Start/End: Original strand, 798842 - 798952
Alignment:
Q  72 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattg 171  Q
    |||||||||||||| || |||||||| |||||||| ||||     ||||| ||||||||||||| ||||||||||| |||||||||||| ||||| | ||    
T  798842 gatttatttgacaaacgaaggaaaaagtgagggactaaaacacctgtttttttaattgtgggacgaaaatgaaaatctgaaattatttgggggactaatg 798941  T
Q  172 aatcaaataag 182  Q
     ||||||||||    
T  798942 gatcaaataag 798952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 24 - 156
Target Start/End: Original strand, 8571574 - 8571707
Alignment:
Q  24 ttaaggttggtccaccatagacgttttggagttaaagttaac-ga-tttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgtttt 121  Q
    |||| |||||||||||||||||  ||||| |||||| ||||| || |  |||||||||||  || ||||| ||||||||| ||||||||| |||||||||    
T  8571574 ttaaagttggtccaccatagac-atttggggttaaacttaacagactagggatttatttggtaaacggagaaaaaaatgaaggaccaaaacgtacgtttt 8571672  T
Q  122 attaattgtgggactaaaatgaaaatttgaaatta 156  Q
    |||||||||  ||| ||||||||||| ||||||||    
T  8571673 attaattgtatgaccaaaatgaaaatgtgaaatta 8571707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 87 - 182
Target Start/End: Original strand, 13197962 - 13198057
Alignment:
Q  87 cggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 182  Q
    ||||||||||| ||||||||  ||| |||| |||||||||||||||||| |||| ||||| | |||||||||| | ||||||||| | ||||||||    
T  13197962 cggaggaaaaagtgagggacttaaacgtaccttttattaattgtgggaccaaaacgaaaactcgaaattatttaatggaccattggagcaaataag 13198057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 72 - 151
Target Start/End: Original strand, 29104371 - 29104450
Alignment:
Q  72 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttga 151  Q
    |||||||||||||| | ||||||||||||||||||  |||  |||||||||||||||||||||  ||||| |||||||||    
T  29104371 gatttatttgacaaacagaggaaaaaatgagggacttaaacatacgttttattaattgtgggatcaaaataaaaatttga 29104450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 72 - 181
Target Start/End: Original strand, 6398503 - 6398613
Alignment:
Q  72 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatg-aaaatttgaaattatttgagggaccatt 170  Q
    |||||||||||||| |||||||||||||||||||| |||| |   |||||||||||| || ||| |||||| ||||| | |||||||||  ||||||| |    
T  6398503 gatttatttgacaaacggaggaaaaaatgagggactaaaacgcttgttttattaattatgagaccaaaatgaaaaatctaaaattatttaggggaccaat 6398602  T
Q  171 gaatcaaataa 181  Q
     ||||||||||    
T  6398603 aaatcaaataa 6398613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 137 - 182
Target Start/End: Original strand, 12850466 - 12850511
Alignment:
Q  137 aaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 182  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||    
T  12850466 aaaatgaaaatttgaaattatttgagggaccattggatcaaataag 12850511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 13116511 - 13116356
Alignment:
Q  1 aataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaat 99  Q
    |||| |||||||||||||| ||||| ||| |||||| |  |||||| ||| |||||||||||||||  |  ||||||||||| ||| ||||||||||  |    
T  13116511 aatagggtctacgatggaccactctgaagattggtctattatagacattt-ggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgt 13116413  T
Q  100 gagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaatta 156  Q
    || |||| |||| |    |||||||||||||||||| ||||||||||  ||||||||    
T  13116412 gaaggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaatta 13116356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 71 - 165
Target Start/End: Complemental strand, 211706 - 211612
Alignment:
Q  71 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgaggga 165  Q
    |||||||||||  || ||||| ||||| | |||||| |||| ||  ||||||||||||||||||| ||||||||||  ||||||||||| |||||    
T  211706 ggatttatttggtaaacggagaaaaaattaagggactaaaacgtctgttttattaattgtgggaccaaaatgaaaacatgaaattatttaaggga 211612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 71 - 165
Target Start/End: Original strand, 240550 - 240644
Alignment:
Q  71 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgaggga 165  Q
    |||||||||||  || ||||| ||||| | |||||| |||| ||  ||||||||||||||||||| ||||||||||  ||||||||||| |||||    
T  240550 ggatttatttggtaaacggagaaaaaattaagggactaaaacgtctgttttattaattgtgggaccaaaatgaaaacatgaaattatttaaggga 240644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 71 - 165
Target Start/End: Complemental strand, 725329 - 725235
Alignment:
Q  71 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgaggga 165  Q
    |||||||||||  || ||||| ||||| | |||||| |||| ||  ||||||||||||||||||| ||||||||||  ||||||||||| |||||    
T  725329 ggatttatttggtaaacggagaaaaaattaagggactaaaacgtctgttttattaattgtgggaccaaaatgaaaacatgaaattatttaaggga 725235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 71 - 165
Target Start/End: Original strand, 793905 - 793999
Alignment:
Q  71 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgaggga 165  Q
    |||||||||||  || ||||| ||||| | |||||| |||| ||  ||||||||||||||||||| ||||||||||  ||||||||||| |||||    
T  793905 ggatttatttggtaaacggagaaaaaattaagggactaaaacgtctgttttattaattgtgggaccaaaatgaaaacatgaaattatttaaggga 793999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 48 - 156
Target Start/End: Original strand, 17339531 - 17339639
Alignment:
Q  48 tttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaat 147  Q
    |||||||||||| |||||  |  ||||||||||| ||| ||||||||||  |||||||| |||| |    ||||||||||||| |||| |||||||||||    
T  17339531 tttggagttaaacttaacagtcaggatttatttggcaaacggaggaaaacgtgagggactaaaatgccatttttattaattgttggaccaaaatgaaaat 17339630  T
Q  148 ttgaaatta 156  Q
     ||||||||    
T  17339631 atgaaatta 17339639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 99 - 182
Target Start/End: Original strand, 17702308 - 17702391
Alignment:
Q  99 tgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 182  Q
    |||||||||||||  || ||||||||| || |||||| |||||||||||| ||||||| || |||||||| | |||||| ||||    
T  17702308 tgagggaccaaaacataggttttattagttatgggaccaaaatgaaaattggaaattaattaagggaccaataaatcaagtaag 17702391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 71 - 156
Target Start/End: Original strand, 45437487 - 45437572
Alignment:
Q  71 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaatta 156  Q
    ||||||||||||| | |||||| ||| | ||||||||||||  |  |||||||||||| |||||  |||||||||| |||||||||    
T  45437487 ggatttatttgactagcggaggcaaacacgagggaccaaaacatgagttttattaattatgggatcaaaatgaaaacttgaaatta 45437572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 9854832 - 9854879
Alignment:
Q  19 cactcttaaggttggtccaccatagacgttttggagttaaagttaacg 66  Q
    ||||||||| ||||||||||||||||| ||| || |||||||||||||    
T  9854832 cactcttaaagttggtccaccatagacatttgggggttaaagttaacg 9854879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 24192616 - 24192661
Alignment:
Q  19 cactcttaaggttggtccaccatagacgttttggagttaaagttaac 65  Q
    ||||||||||||||||||||||||||| ||| || ||||||||||||    
T  24192616 cactcttaaggttggtccaccatagacatttagg-gttaaagttaac 24192661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 156
Target Start/End: Complemental strand, 17338151 - 17338067
Alignment:
Q  72 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaatta 156  Q
    |||||||||| ||| ||||| ||||  |||||||| |||| |    |||||||||||||||||| ||||||||||  ||||||||    
T  17338151 gatttatttggcaaacggagaaaaatgtgagggactaaaacgccatttttattaattgtgggaccaaaatgaaaacatgaaatta 17338067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 93; Significance: 4e-45; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 3 - 182
Target Start/End: Original strand, 32256332 - 32256511
Alignment:
Q  3 taaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatga 101  Q
    |||||| ||| |||||| ||| |||| ||||||||||||||||| ||| | |||||||||||||| || | ||||||||| |||  |||||||||| |||    
T  32256332 taaggtttacaatggaccacttttaatgttggtccaccatagacattt-gaagttaaagttaacggttggaatttatttggcaaatggaggaaaaagtga 32256430  T
Q  102 gggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 182  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||| |||||||||||||||||||||||| ||||||||||    
T  32256431 gggaccaaaaggtacattttattaattatgggaccaaaatgaaaacttgaaattatttgagggaccattggatcaaataag 32256511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 47454518 - 47454337
Alignment:
Q  1 aataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaat 99  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||| ||| | ||||||||||||   |  ||||||||||| ||| || || ||||  |    
T  47454518 aataaggtctacgatggaccactcttaaggttggtctaccatagacatttag-agttaaagttaatagtcgggatttatttggcaaacgaagaaaaactt 47454420  T
Q  100 gagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 182  Q
    |||||||||||| ||||||||||||||||||||||| |||||||||  ||||||||||||||||||||| || ||||||||||    
T  47454419 gagggaccaaaatgtacgttttattaattgtgggaccaaaatgaaagcttgaaattatttgagggaccactggatcaaataag 47454337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 2 - 182
Target Start/End: Original strand, 6173387 - 6173566
Alignment:
Q  2 ataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatg 100  Q
    |||||||||||||||||| ||| |||| |||||||||| |||||  ||| | ||||||||||||  |  |||||||||||| ||| ||||||||||| ||    
T  6173387 ataaggtctacgatggaccacttttaaagttggtccactatagatatttag-agttaaagttaat-agatggatttatttggcaaacggaggaaaaagtg 6173484  T
Q  101 agggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 182  Q
    ||||||||||| |||||||||||||||| ||||   |||||||||| |||||||||||||||||||||||| ||||||||||    
T  6173485 agggaccaaaatgtacgttttattaattatgggtacaaaatgaaaacttgaaattatttgagggaccattggatcaaataag 6173566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 71 - 182
Target Start/End: Complemental strand, 33096980 - 33096869
Alignment:
Q  71 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccatt 170  Q
    ||||||||||| ||| ||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||| || |||||||||||||||||||||||    
T  33096980 ggatttatttggcaaacggaggaaaaagtgagggaccaaaaggtaagttttattaattgtgggcctaaaatgagaacttgaaattatttgagggaccatt 33096881  T
Q  171 gaatcaaataag 182  Q
    | ||||||||||    
T  33096880 ggatcaaataag 33096869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 72 - 182
Target Start/End: Original strand, 47456381 - 47456491
Alignment:
Q  72 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattg 171  Q
    |||||||||| ||| | || |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  47456381 gatttatttggcaaacagaagaaaaaatgagggaccaaaaagtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttgagggaccattg 47456480  T
Q  172 aatcaaataag 182  Q
     ||||||||||    
T  47456481 gatcaaataag 47456491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 19 - 168
Target Start/End: Complemental strand, 32255154 - 32255003
Alignment:
Q  19 cactcttaaggttggtccaccatagacgt--tttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtac 116  Q
    |||||||||||||||||||||||| || |  ||||| |||||| |||||  |  ||||||||||| ||| ||||||||||| ||||||| ||||| ||||    
T  32255154 cactcttaaggttggtccaccataaacatcatttggggttaaacttaaccgtcgggatttatttggcaaacggaggaaaaagtgagggatcaaaatgtac 32255055  T
Q  117 gttttattaattgtgggactaaaatgaaaatttgaaattatttgagggacca 168  Q
    |||||||||||| |||||| ||||| ||||||||||||||||||||||||||    
T  32255054 gttttattaattatgggaccaaaataaaaatttgaaattatttgagggacca 32255003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 19 - 181
Target Start/End: Original strand, 43460775 - 43460938
Alignment:
Q  19 cactcttaaggttggtccaccatagacgtt-ttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacg 117  Q
    ||||||||| ||||||||||||||||| |  || |||||||| |||||  |  ||||||||||| |||  |||||||||| |||||||| |||| |||||    
T  43460775 cactcttaaagttggtccaccatagacataatttgagttaaacttaactgtgaggatttatttggcaaatggaggaaaaagtgagggactaaaatgtacg 43460874  T
Q  118 ttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataa 181  Q
    |||||||||||||||||| |||||||||| || |||| |||||||||| |||||||||||||||    
T  43460875 ttttattaattgtgggaccaaaatgaaaacttcaaataatttgagggatcattgaatcaaataa 43460938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 72 - 175
Target Start/End: Complemental strand, 30333395 - 30333292
Alignment:
Q  72 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattg 171  Q
    |||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||||||||  ||||||| ||    
T  30333395 gatttatttgacaaacggagaaaaaaatgagggaccaaaagatacgttttattaattgtgggaccaaaatgaaaacttgaaattatttaggggaccaatg 30333296  T
Q  172 aatc 175  Q
    ||||    
T  30333295 aatc 30333292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 20 - 182
Target Start/End: Complemental strand, 47059271 - 47059108
Alignment:
Q  20 actcttaaggttggtccaccatagacgttttggag--ttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacg 117  Q
    ||||||||||||| |||||||||||| ||||||||  ||||| |||||| |  ||||||||||| ||| ||||||||||| ||||||| ||||| ||||     
T  47059271 actcttaaggttgctccaccatagac-ttttggagggttaaacttaacggtcaggatttatttggcaaacggaggaaaaagtgagggatcaaaacgtaca 47059173  T
Q  118 ttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 182  Q
    ||||||||||||| |||| |||||||||| || |||||| ||  |||||||||||||| ||||||    
T  47059172 ttttattaattgtaggaccaaaatgaaaacttaaaattaattaggggaccattgaatctaataag 47059108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 41079770 - 41079936
Alignment:
Q  1 aataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaat 99  Q
    ||||||||||||||||||| ||| |||| |||| |||||||||||  ||| |||||||||||||||| |  ||||||||||  ||| |||||||||| ||    
T  41079770 aataaggtctacgatggaccacttttaatgttgttccaccatagatattt-ggagttaaagttaacggtagggatttatttagcaaacggaggaaaagat 41079868  T
Q  100 gagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggacca 168  Q
     ||||||||||| |||||||||||| |||||||||| ||||| |||| | ||||||| |||||||||||    
T  41079869 aagggaccaaaacgtacgttttatt-attgtgggaccaaaataaaaaatggaaattaattgagggacca 41079936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 71 - 182
Target Start/End: Complemental strand, 30310232 - 30310121
Alignment:
Q  71 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccatt 170  Q
    ||||||||||| ||| ||||||||||||||||| ||  ||| ||||||||||||||||||||||| |||||||||| |||||||||||| |||||| |||    
T  30310232 ggatttatttggcaaacggaggaaaaaatgaggaactcaaatgtacgttttattaattgtgggacaaaaatgaaaacttgaaattatttaagggactatt 30310133  T
Q  171 gaatcaaataag 182  Q
    | ||||||||||    
T  30310132 ggatcaaataag 30310121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 72 - 182
Target Start/End: Original strand, 45455378 - 45455488
Alignment:
Q  72 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattg 171  Q
    |||||||||| ||| ||||| ||||| ||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||| || ||||||||| |    
T  45455378 gatttatttggcaaacggagaaaaaagtgagggatcaaaatgtacgttttattaattgtgggaccaaaatgaaaatttgaaattaattaagggaccatcg 45455477  T
Q  172 aatcaaataag 182  Q
     ||||||||||    
T  45455478 gatcaaataag 45455488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 19 - 190
Target Start/End: Original strand, 40509687 - 40509858
Alignment:
Q  19 cactcttaaggttggtccaccatagacgttttggagttaaagttaac---gatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggta 115  Q
    |||||||||||||||||||| |||||| ||| || |||||| |||||   || |  ||||||||||  || ||||||||||| ||||| ||  ||| |||    
T  40509687 cactcttaaggttggtccactatagacatttggg-gttaaacttaacaccgaat--gatttatttggtaaacggaggaaaaagtgaggaacttaaacgta 40509783  T
Q  116 cgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataagtcatttat 190  Q
    |||||||||||||||||||| |||||||||| ||||||||||||  |||||||||||| |||||||| |||||||    
T  40509784 cgttttattaattgtgggaccaaaatgaaaacttgaaattatttaggggaccattgaaacaaataagccatttat 40509858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 71 - 182
Target Start/End: Complemental strand, 40508489 - 40508378
Alignment:
Q  71 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccatt 170  Q
    ||||||||||| | | ||||||||||| ||||||||  ||| ||||||||||||||||||||||| |||||||||| ||||||||||||  |||||||||    
T  40508489 ggatttatttggctaacggaggaaaaagtgagggacttaaacgtacgttttattaattgtgggacaaaaatgaaaacttgaaattatttaggggaccatt 40508390  T
Q  171 gaatcaaataag 182  Q
    | ||||||||||    
T  40508389 ggatcaaataag 40508378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 43459636 - 43459455
Alignment:
Q  1 aataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaat 99  Q
    |||||||||||||||| || | | ||||||||| |||||||||||| ||| ||||||||| |||||      |||||||||| ||| |||||||||| ||    
T  43459636 aataaggtctacgatgtaccatttttaaggttgatccaccatagacattt-ggagttaaacttaacagccgagatttatttggcaaacggaggaaaacat 43459538  T
Q  100 gagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 182  Q
    |||||||  ||| | ||||||||||||||||||||| |||||||||| ||||||||||||  ||||| | || ||||||||||    
T  43459537 gagggacttaaacgcacgttttattaattgtgggaccaaaatgaaaacttgaaattatttaggggactaatggatcaaataag 43459455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 22 - 156
Target Start/End: Original strand, 30334597 - 30334727
Alignment:
Q  22 tcttaaggttggtccaccatagacgttttggagttaaagttaacgatttgga-tttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttt 120  Q
    |||||| |||||||| |||||||| ||| | ||||| | |||||| |||||| |||||||| ||| |||||| |    ||||||||||||||||||||||    
T  30334597 tcttaaagttggtcctccatagacatttag-agttagatttaacggtttggaatttatttggcaaacggaggga----tgagggaccaaaaggtacgttt 30334691  T
Q  121 tattaattgtgggactaaaatgaaaatttgaaatta 156  Q
    |||||||||||||||||||||||||| |||||||||    
T  30334692 tattaattgtgggactaaaatgaaaacttgaaatta 30334727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 72 - 182
Target Start/End: Complemental strand, 32603043 - 32602933
Alignment:
Q  72 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattg 171  Q
    |||||||||| ||| ||||| ||||| |||||||| |||| |||||||||||||||| |||||| ||||| |||| |||||||||||||| |||||| ||    
T  32603043 gatttatttggcaaacggagtaaaaagtgagggactaaaacgtacgttttattaattatgggaccaaaataaaaacttgaaattatttgaaggaccaatg 32602944  T
Q  172 aatcaaataag 182  Q
     ||||||||||    
T  32602943 gatcaaataag 32602933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 87 - 190
Target Start/End: Original strand, 22115185 - 22115289
Alignment:
Q  87 cggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttga-gggaccattgaatcaaataagtca 185  Q
    ||||||||||| ||||| ||  ||| ||||||||||||||||||||||| |||||||||| |||||||||||| | |||||||||||| |||||||| ||    
T  22115185 cggaggaaaaagtgaggaacttaaacgtacgttttattaattgtgggaccaaaatgaaaacttgaaattattttaggggaccattgaaacaaataagcca 22115284  T
Q  186 tttat 190  Q
    |||||    
T  22115285 tttat 22115289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 72 - 182
Target Start/End: Original strand, 4300054 - 4300164
Alignment:
Q  72 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattg 171  Q
    |||||||||| ||| | ||||||||| ||||||||  ||| ||||||||||||||||||||||| |||||||||| |||||||||||   ||||| ||||    
T  4300054 gatttatttggcaaacagaggaaaaagtgagggacttaaacgtacgttttattaattgtgggaccaaaatgaaaacttgaaattattcaggggacgattg 4300153  T
Q  172 aatcaaataag 182  Q
     ||||||||||    
T  4300154 gatcaaataag 4300164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 72 - 181
Target Start/End: Complemental strand, 46835785 - 46835676
Alignment:
Q  72 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattg 171  Q
    |||||||||||||| | ||||||||| |||| |||  |||  ||| ||||||||||||| ||||||||| |||||||||||||||||| |||||||||||    
T  46835785 gatttatttgacaaacagaggaaaaattgagagacttaaaaatacattttattaattgtaggactaaaaagaaaatttgaaattatttaagggaccattg 46835686  T
Q  172 aatcaaataa 181  Q
     |||| ||||    
T  46835685 gatcatataa 46835676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 40812548 - 40812703
Alignment:
Q  1 aataaggtctacgatgga-cactcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaat 99  Q
    |||||| ||||||||||| |||| |||||||||||||||||| |    |||||||||||||| |||  |  |||| |||||||||| | |||||||| ||    
T  40812548 aataagatctacgatggatcacttttaaggttggtccaccat-ggttatttggagttaaagtaaacagtcgggatatatttgacaaacagaggaaaatat 40812646  T
Q  100 gagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaatta 156  Q
    |||||| ||||| |||||||||||||||| ||| || ||||||||||  ||||||||    
T  40812647 gagggagcaaaacgtacgttttattaattatggaaccaaaatgaaaacatgaaatta 40812703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 71 - 182
Target Start/End: Complemental strand, 45454149 - 45454038
Alignment:
Q  71 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccatt 170  Q
    ||||||||||| ||| ||||||||||| |||||||| |||| ||| |||||||||||| || ||| ||||||||||  |||||||| ||  |||||||||    
T  45454149 ggatttatttggcaaacggaggaaaaagtgagggactaaaacgtatgttttattaattatgagaccaaaatgaaaacgtgaaattaattaggggaccatt 45454050  T
Q  171 gaatcaaataag 182  Q
     |||||||||||    
T  45454049 taatcaaataag 45454038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 93 - 182
Target Start/End: Original strand, 30311496 - 30311585
Alignment:
Q  93 aaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 182  Q
    ||||||||||||||  ||| ||| ||||||||||||||||||| |||||||||||||||||||||||  ||||| | || ||||||||||    
T  30311496 aaaaaatgagggacttaaacgtatgttttattaattgtgggaccaaaatgaaaatttgaaattatttaggggactaatggatcaaataag 30311585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 47060410 - 47060591
Alignment:
Q  1 aataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaat 99  Q
    ||||||||||| | ||||| | ||||||||||||||||||||| || ||| || |||||| |||||  |  ||||||||||| ||| ||||  |||   |    
T  47060410 aataaggtctatggtggactattcttaaggttggtccaccatatacattt-ggtgttaaacttaacagtccggatttatttggcaaacggaaaaaagggt 47060508  T
Q  100 gagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 182  Q
    |||||||||||| |||||||||||||||| | |||| |||||||||| || |||||| ||  |  ||||||||||| ||||||    
T  47060509 gagggaccaaaacgtacgttttattaattataggaccaaaatgaaaacttaaaattaattaggaaaccattgaatctaataag 47060591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 72 - 158
Target Start/End: Complemental strand, 11344614 - 11344531
Alignment:
Q  72 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatt 158  Q
    |||||||||||||| |||||   ||||||| ||||  ||| ||||||||||||||||||||||| |||||||||| |||||||||||    
T  11344614 gatttatttgacaaacggag---aaaatgaaggacttaaacgtacgttttattaattgtgggaccaaaatgaaaacttgaaattatt 11344531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 11501361 - 11501206
Alignment:
Q  1 aataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaat 99  Q
    |||||||||||| ||| || ||| ||||||||||||||||||||||  |||| |||||||||||||  |  ||||||||||| |||  |||||||||  |    
T  11501361 aataaggtctacaatgaaccacttttaaggttggtccaccatagac-atttgaagttaaagttaacagtcgggatttatttggcaaatggaggaaaaggt 11501263  T
Q  100 gagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaatta 156  Q
    ||||||| |||| |    ||||||||| |||||||| ||||||||||  ||||||||    
T  11501262 gagggactaaaatgctatttttattaactgtgggaccaaaatgaaaacatgaaatta 11501206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 146
Target Start/End: Original strand, 13564191 - 13564319
Alignment:
Q  19 cactcttaaggttggtccaccatagacgtt--ttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtac 116  Q
    ||||||||||| || |||||||||||| ||  |||| |||||| |||||| |  ||||||||||| ||| ||||||||||  |||||||| |||| |       
T  13564191 cactcttaaggatgatccaccatagacattatttggggttaaacttaacg-tcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgcca 13564289  T
Q  117 gttttattaattgtgggactaaaatgaaaa 146  Q
    ||||||||||||||||||| ||||||||||    
T  13564290 gttttattaattgtgggaccaaaatgaaaa 13564319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 182
Target Start/End: Complemental strand, 40811394 - 40811340
Alignment:
Q  128 tgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 182  Q
    |||||||| |||||||||| |||||||||||||||||||||||| ||||||||||    
T  40811394 tgtgggaccaaaatgaaaacttgaaattatttgagggaccattggatcaaataag 40811340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 48 - 156
Target Start/End: Original strand, 22538830 - 22538938
Alignment:
Q  48 tttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaat 147  Q
    ||||||||||||||||||  |   |||||||||| ||| |||||||||| ||||||||| |||| ||   |||||||||||||||||| |||| |||||     
T  22538830 tttggagttaaagttaaccgtcgagatttatttggcaaacggaggaaaagatgagggactaaaacgtcatttttattaattgtgggaccaaaaagaaaac 22538929  T
Q  148 ttgaaatta 156  Q
     ||||||||    
T  22538930 atgaaatta 22538938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 87 - 182
Target Start/End: Original strand, 33779105 - 33779200
Alignment:
Q  87 cggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 182  Q
    |||||||||||  ||||||| |||| ||  ||||||||||||||||| | |||||||||| ||||||||||||  ||||| | || ||||||||||    
T  33779105 cggaggaaaaagcgagggactaaaacgtgagttttattaattgtggggccaaaatgaaaacttgaaattatttaggggactaatggatcaaataag 33779200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 72 - 182
Target Start/End: Complemental strand, 4298823 - 4298713
Alignment:
Q  72 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattg 171  Q
    |||||||||| ||| | ||||||||| ||||||||  |||   || |||||||||||||||||  ||||| |||| || |||||||||  ||||||||||    
T  4298823 gatttatttggcaaacagaggaaaaagtgagggacttaaacccacattttattaattgtgggatcaaaataaaaacttaaaattatttaggggaccattg 4298724  T
Q  172 aatcaaataag 182  Q
     ||||||||||    
T  4298723 gatcaaataag 4298713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 24 - 168
Target Start/End: Complemental strand, 41078915 - 41078770
Alignment:
Q  24 ttaaggttggtccaccatagacgt--tttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgtttt 121  Q
    ||||| ||||||||||||| || |  ||||| ||||||||||||  |  ||||||||| | |||  |||||||||  | | ||| |||||| ||| ||||    
T  41078915 ttaagattggtccaccatatacatcatttgg-gttaaagttaaccgtcgggatttattcggcaaatggaggaaaatctaaaggatcaaaagatacttttt 41078817  T
Q  122 attaattgtgggactaaaatgaaaatttgaaattatttgagggacca 168  Q
    || ||||||||||| |||||||||| | ||||||| |||||||||||    
T  41078816 atcaattgtgggaccaaaatgaaaaatggaaattaattgagggacca 41078770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 22337330 - 22337401
Alignment:
Q  24 ttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaa 96  Q
    ||||||||||||||||||||||  |||| ||||||| |||||| |  ||||||||||| ||| ||||||||||    
T  22337330 ttaaggttggtccaccatagac-atttgaagttaaatttaacggtcaggatttatttggcaaacggaggaaaa 22337401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 71 - 159
Target Start/End: Original strand, 3414839 - 3414927
Alignment:
Q  71 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattattt 159  Q
    ||||||||||| |||  |||||||||| ||| |||| |||| |    ||||||||||| |||||| ||||||||||  |||||||||||    
T  3414839 ggatttatttggcaaatggaggaaaaagtgaaggactaaaacgccatttttattaattatgggaccaaaatgaaaacatgaaattattt 3414927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 9662171 - 9662326
Alignment:
Q  1 aataaggtctacgatggacactct-taaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaat 99  Q
    ||||||||||| | |||||  ||| ||| ||||||||||||||||| ||| | ||||||| |||||  | ||||||||||||||   |||||  |||  |    
T  9662171 aataaggtctatggtggactatctataatgttggtccaccatagacattt-gaagttaaatttaacagtctggatttatttgaccgacggagacaaacgt 9662269  T
Q  100 gagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaatta 156  Q
    ||||||||||||  |  ||||| ||| || ||| ||||| ||||||| |||||||||    
T  9662270 gagggaccaaaacatgagtttttttagttatggaactaagatgaaaacttgaaatta 9662326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 79; Significance: 8e-37; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 109680 - 109861
Alignment:
Q  1 aataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaat 99  Q
    ||||||||||||||||||| | | ||||||||||||||||||| || ||| | ||||||||||||   || ||||| ||||| |||   ||| ||||| |    
T  109680 aataaggtctacgatggactatttttaaggttggtccaccatatacattt-gaagttaaagttaatagttgggattcatttggcaaattgagaaaaaagt 109778  T
Q  100 gagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 182  Q
    ||||||| |||| |||||||||||||||||| |||| |||||||||| |||||||||||| ||||||||||||||||||||||    
T  109779 gagggactaaaatgtacgttttattaattgtaggaccaaaatgaaaacttgaaattatttaagggaccattgaatcaaataag 109861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 71 - 182
Target Start/End: Complemental strand, 108624 - 108513
Alignment:
Q  71 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccatt 170  Q
    ||||||||||| |||  |||||||||||||||||| ||||| |||||||||||||||| |||||  |||||| ||| | ||||||| ||  || |||| |    
T  108624 ggatttatttggcaaatggaggaaaaaatgagggatcaaaacgtacgttttattaattatgggatcaaaatgtaaaatggaaattaattagggaaccaat 108525  T
Q  171 gaatcaaataag 182  Q
    |||| |||||||    
T  108524 gaattaaataag 108513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 54136 - 54301
Alignment:
Q  19 cactcttaaggttggtccaccatagacgt--tttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtac 116  Q
    |||| |||||||||||||||||||||| |  ||||| |||| | |||||  |   |||||||||| ||| ||||||||||  ||||||||||||| | ||    
T  54136 cacttttaaggttggtccaccatagacatcatttggggttatacttaacagtcacgatttatttggcaaacggaggaaaatttgagggaccaaaacgcac 54235  T
Q  117 gttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 182  Q
    ||||||||||||||| ||| ||||| |||| ||||||||||||||||||||| || ||||||||||    
T  54236 gttttattaattgtgcgaccaaaattaaaacttgaaattatttgagggaccaatggatcaaataag 54301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 24 - 178
Target Start/End: Complemental strand, 52749 - 52596
Alignment:
Q  24 ttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttat 123  Q
    ||||||||||||||||||| || |||   |||||||||||||  |  ||||||||||| ||| ||||| ||||  ||||||||||||| |||| ||||||    
T  52749 ttaaggttggtccaccatatacatttaa-agttaaagttaactgtcgggatttatttggcaaacggagaaaaatctgagggaccaaaacgtacattttat 52651  T
Q  124 taattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaa 178  Q
    |||||||||||  |||||||||| ||||||||| ||   ||||||||||||||||    
T  52650 taattgtgggatcaaaatgaaaacttgaaattaattagaggaccattgaatcaaa 52596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 64; Significance: 7e-28; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 71 - 182
Target Start/End: Original strand, 6452516 - 6452627
Alignment:
Q  71 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccatt 170  Q
    ||||||||||| ||| ||||||||||||||||||||  ||| |||||||||||||||| |||||| |||||||||| ||||||||||||  ||||||| |    
T  6452516 ggatttatttggcaaacggaggaaaaaatgagggactcaaacgtacgttttattaattatgggaccaaaatgaaaacttgaaattatttaggggaccaat 6452615  T
Q  171 gaatcaaataag 182  Q
    | ||||||||||    
T  6452616 ggatcaaataag 6452627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 87 - 182
Target Start/End: Complemental strand, 34023981 - 34023886
Alignment:
Q  87 cggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 182  Q
    ||||||||||  |||||||||||||||||||||||||||||||||| || |||||||||| || ||||||||||||||||||||  ||||||||||    
T  34023981 cggaggaaaaggtgagggaccaaaaggtacgttttattaattgtggtaccaaaatgaaaacttaaaattatttgagggaccatttgatcaaataag 34023886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 75 - 162
Target Start/End: Original strand, 34024073 - 34024160
Alignment:
Q  75 ttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgag 162  Q
    ||||||||||| ||||||||||| ||||||| ||||| |||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  34024073 ttatttgacaaacggaggaaaaagtgagggatcaaaatgtacattttattaattgtgggaccaaaatgaaaatttgaaattatttgag 34024160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 52 - 168
Target Start/End: Complemental strand, 232305 - 232190
Alignment:
Q  52 gagttaaagttaacgatttgg-atttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttg 150  Q
    ||||||||||||||  ||||| ||||||||| ||| ||||||||||| |||||||| |||| ||  |||||||||||| |||||| |||||||||| |||    
T  232305 gagttaaagttaacagtttgggatttatttggcaaacggaggaaaaagtgagggactaaaacgt--gttttattaattatgggaccaaaatgaaaaattg 232208  T
Q  151 aaattatttgagggacca 168  Q
    ||||||||| ||||||||    
T  232207 aaattatttaagggacca 232190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 7311677 - 7311840
Alignment:
Q  19 cactcttaaggttggtccaccatagacgt--tttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtac 116  Q
    |||||||||||||||| |||||||||| |  |||||| ||||| |||||  |  ||||||||||| |||   ||  ||||| | ||||||||||||||||    
T  7311677 cactcttaaggttggttcaccatagacatcatttgga-ttaaacttaactgtgaggatttatttggcaaatagataaaaaagtaagggaccaaaaggtac 7311775  T
Q  117 gttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 182  Q
    |||| |||||||||||||  |||||||||| || ||||||||| |||||||||||||| |||||||    
T  7311776 gttt-attaattgtgggatcaaaatgaaaacttaaaattatttaagggaccattgaattaaataag 7311840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 23397289 - 23397434
Alignment:
Q  1 aataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaat 99  Q
    |||||||| |||| ||||| ||| |||||||||||||||||||||| ||| | ||||||| |||||| |  ||||||||||| ||| ||||||||||  |    
T  23397289 aataaggtatacggtggactacttttaaggttggtccaccatagacattt-gaagttaaatttaacggtcgggatttatttggcaaacggaggaaaaggt 23397387  T
Q  100 gagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaa 146  Q
    ||||||| |||| |    |||||||||||||||||| ||||||||||    
T  23397388 gagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 23397434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 73 - 182
Target Start/End: Original strand, 15730036 - 15730146
Alignment:
Q  73 atttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgtttt-attaattgtgggactaaaatgaaaatttgaaattatttgagggaccattg 171  Q
    ||||||||  ||| |||| |||||| ||||||||||||| |||  |||| |||||||||||||| |||||||||| | ||||||| ||||||||||| ||    
T  15730036 atttatttagcaaacggaagaaaaagtgagggaccaaaatgtatttttttattaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaatg 15730135  T
Q  172 aatcaaataag 182  Q
    |||| ||||||    
T  15730136 aatctaataag 15730146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 71 - 159
Target Start/End: Complemental strand, 6452395 - 6452307
Alignment:
Q  71 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattattt 159  Q
    ||||||||||| ||| ||||||||||| |||||||| |||| |||| ||||||||||| | |||| |||| ||||| ||||||||||||    
T  6452395 ggatttatttggcaaacggaggaaaaagtgagggactaaaacgtaccttttattaattataggaccaaaacgaaaacttgaaattattt 6452307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 5186748 - 5186594
Alignment:
Q  1 aataaggtctacgatggacactcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatg 100  Q
    ||||||||||||||| |||  | |||||||| || |||||||||  ||| | |||||||||||||| |  ||||||||||| ||| |||||||||| |||    
T  5186748 aataaggtctacgattgaccattttaaggtttgttcaccatagatattt-gaagttaaagttaacggtcgggatttatttggcaaacggaggaaaagatg 5186650  T
Q  101 agggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaatta 156  Q
    | |||  |||| ||   |||||||||||||| ||| ||||||||||  ||||||||    
T  5186649 atggattaaaacgtcacttttattaattgtgtgaccaaaatgaaaacatgaaatta 5186594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 29380372 - 29380227
Alignment:
Q  1 aataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaat 99  Q
    ||||||||||||||||||| ||| ||||||||| ||||||||| || ||| | ||||||| |||||| |  ||||||||||| ||| |||| |||||  |    
T  29380372 aataaggtctacgatggactacttttaaggttgatccaccatatacattt-gaagttaaaattaacggtcgggatttatttggcaaacggaagaaaaggt 29380274  T
Q  100 gagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaa 146  Q
    ||||||| |||| |    |||| ||||||||||||| ||||||||||    
T  29380273 gagggactaaaacgccatttttgttaattgtgggaccaaaatgaaaa 29380227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 72 - 184
Target Start/End: Original strand, 27967055 - 27967167
Alignment:
Q  72 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattg 171  Q
    ||||| |||| ||| || |||||||| | | ||| ||||| ||| ||| ||||||||||||||  |||||||||| | | ||||||||| ||||||||||    
T  27967055 gatttttttggcaaacgtaggaaaaattaaaggatcaaaatgtatgttctattaattgtgggatcaaaatgaaaactaggaattatttgggggaccattg 27967154  T
Q  172 aatcaaataagtc 184  Q
     ||||||||||||    
T  27967155 gatcaaataagtc 27967167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 90 - 184
Target Start/End: Original strand, 27082168 - 27082263
Alignment:
Q  90 aggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatt-tgagggaccattgaatcaaataagtc 184  Q
    |||||||| ||||||||  |||  ||| |||||||||||||||||| |||||||||||| |||||||||  | |||||||||| ||| ||||||||    
T  27082168 aggaaaaagtgagggacttaaacatactttttattaattgtgggaccaaaatgaaaattcgaaattattcagggggaccattggatcgaataagtc 27082263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 17839074 - 17839219
Alignment:
Q  1 aataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaat 99  Q
    |||||||||||| |||||| ||| ||||||||  ||||||||  || ||| | ||||||| |||||| |  ||||||||||| ||| ||||||||||  |    
T  17839074 aataaggtctacaatggactacttttaaggttaatccaccatctacattt-gaagttaaaattaacggtcgggatttatttggcaaacggaggaaaaggt 17839172  T
Q  100 gagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaa 146  Q
    ||||||| |||| |    |||||||||||||||||| ||||||||||    
T  17839173 gagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 17839219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 168
Target Start/End: Original strand, 233554 - 233666
Alignment:
Q  52 gagttaaagttaacgatttg-gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttg 150  Q
    |||||||||||||| ||||| |||||||||| |||      ||||||||||||||| |||| ||   ||||||||||| |||||| |||||||||| |||    
T  233554 gagttaaagttaacaatttgagatttatttggcaaa-----gaaaaaatgagggactaaaacgtgttttttattaattatgggaccaaaatgaaaaattg 233648  T
Q  151 aaattatttgagggacca 168  Q
    ||||||||| | ||||||    
T  233649 aaattatttaaaggacca 233666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 159
Target Start/End: Complemental strand, 12669886 - 12669746
Alignment:
Q  19 cactcttaaggttggtccaccatagacgttttggagttaaagttaacgatttg-gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacg 117  Q
    |||||||||||||||||||||||| || |||  | ||||||||||||  || | |||||||||  ||| ||||||||||| ||| |||| ||||  |  |    
T  12669886 cactcttaaggttggtccaccatacacatttgag-gttaaagttaacagttagagatttatttagcaaacggaggaaaaagtgacggactaaaacttgag 12669788  T
Q  118 ttttattaattgtgggactaaaatgaaaatttgaaattattt 159  Q
    |||||||||||||| ||| ||||| ||||||| | |||||||    
T  12669787 ttttattaattgtgagaccaaaataaaaatttaatattattt 12669746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 181
Target Start/End: Complemental strand, 27081034 - 27080925
Alignment:
Q  72 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattg 171  Q
    |||||||||  ||| ||||| ||||| ||||||||  ||| |||  |||||||||||||  ||| |||||||||| | |||||||||| ||||| |||||    
T  27081034 gatttatttcgcaaacggagaaaaaagtgagggacttaaatgtaaattttattaattgtaagaccaaaatgaaaactcgaaattatttaagggatcattg 27080935  T
Q  172 aatcaaataa 181  Q
     |||||||||    
T  27080934 gatcaaataa 27080925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 19 - 156
Target Start/End: Original strand, 29381682 - 29381820
Alignment:
Q  19 cactcttaaggttggtccaccatagacgt--tttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtac 116  Q
    ||||||||||||| |||||||| |||| |  ||||| |||||| |||||  || |||||||||||  || |||||||||| |||| |||| |||| ||      
T  29381682 cactcttaaggtttgtccaccacagacatcatttggggttaaacttaactgtt-ggatttatttggtaaacggaggaaaagatgaaggactaaaacgtca 29381780  T
Q  117 gttttattaattgtgggactaaaatgaaaatttgaaatta 156  Q
     |||||||||||||||||  |||||||||||  |||||||    
T  29381781 tttttattaattgtgggatcaaaatgaaaataagaaatta 29381820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 182
Target Start/End: Complemental strand, 7310433 - 7310276
Alignment:
Q  24 ttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttat 123  Q
    ||||||||||| |||||||||| ||| ||||||||| |||||      ||||||||||  || ||||| ||||  ||| ||||  |||  ||||||||||    
T  7310433 ttaaggttggttcaccatagacattt-ggagttaaacttaacagccgagatttatttggtaaacggagaaaaacctgaaggacttaaacatacgttttat 7310335  T
Q  124 taattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 182  Q
    ||||| |||||| |||||||||| || ||||||||| | |||||  || ||||||||||    
T  7310334 taattatgggaccaaaatgaaaacttaaaattatttaaaggaccgatggatcaaataag 7310276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 156
Target Start/End: Complemental strand, 6701490 - 6701406
Alignment:
Q  72 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaatta 156  Q
    |||||||||| ||| ||||||||||  |||||||| ||||      |||||||||||||||||| ||||||||||| ||||||||    
T  6701490 gatttatttggcaaacggaggaaaatgtgagggactaaaataccatttttattaattgtgggaccaaaatgaaaatatgaaatta 6701406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 156
Target Start/End: Original strand, 6702853 - 6702960
Alignment:
Q  48 tttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaat 147  Q
    |||||||||||| |||||  |  ||||||||||| ||| ||||||||||  |||||||  ||| |  |  |||||||||||||||||| |||||||||||    
T  6702853 tttggagttaaacttaacagtcaggatttatttggcaaacggaggaaaacgtgagggataaaacgccat-ttttattaattgtgggaccaaaatgaaaat 6702951  T
Q  148 ttgaaatta 156  Q
     ||||||||    
T  6702952 atgaaatta 6702960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 118 - 156
Target Start/End: Original strand, 2687976 - 2688014
Alignment:
Q  118 ttttattaattgtgggactaaaatgaaaatttgaaatta 156  Q
    |||||||||||||||||||||||||||||  ||||||||    
T  2687976 ttttattaattgtgggactaaaatgaaaacatgaaatta 2688014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 146
Target Start/End: Complemental strand, 17837780 - 17837652
Alignment:
Q  19 cactcttaaggttggtccaccatagacgt--tttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtac 116  Q
    ||||||||| ||| ||||||||||||| |  ||||| |||||| |||||  || |||||||||||  || |||| ||||| ||||||||| |||| |       
T  17837780 cactcttaatgtttgtccaccatagacatcatttggggttaaacttaactgtt-ggatttatttggtaaacggaagaaaagatgagggactaaaacgcca 17837682  T
Q  117 gttttattaattgtgggactaaaatgaaaa 146  Q
     ||||||||||||||| || ||||||||||    
T  17837681 tttttattaattgtggaaccaaaatgaaaa 17837652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 118 - 156
Target Start/End: Original strand, 18346802 - 18346840
Alignment:
Q  118 ttttattaattgtgggactaaaatgaaaatttgaaatta 156  Q
    |||||||||||||||||| ||||||||||| ||||||||    
T  18346802 ttttattaattgtgggaccaaaatgaaaatatgaaatta 18346840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1152 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold1152
Description:

Target: scaffold1152; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 2410 - 2577
Alignment:
Q  1 aataaggtctacgatggac-actcttaaggttggtccaccatagacgt-tttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaa 98  Q
    ||||||||||||||| ||| ||| ||||||||||||||||||  || | ||||||||||||||||||  |  | |||||||||  || | |||||||||     
T  2410 aataaggtctacgatagaccacttttaaggttggtccaccatt-acatatttggagttaaagttaacagtcggaatttatttggaaaacagaggaaaaac 2508  T
Q  99 tgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggacca 168  Q
    | |||||||||||||||| |||||||||||||||||| |||||||||| | ||||||| |||||||||||    
T  2509 taagggaccaaaaggtactttttattaattgtgggaccaaaatgaaaa-tggaaattaattgagggacca 2577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 43526 - 43684
Alignment:
Q  19 cactcttaaggttggtccaccatagacgtt--ttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtac 116  Q
    |||||||||| |||||||||||||||| |   |||| |||||| |||||  |  ||| ||||||| ||| ||||||||||| ||||||||  |||  |||    
T  43526 cactcttaagattggtccaccatagacatcacttggggttaaacttaaccgtcaggacttatttggcaaacggaggaaaaagtgagggacttaaacatac 43625  T
Q  117 gttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatc 175  Q
    |||||||||||| |||||| ||||| |||| || |||||||||||||||||| ||||||    
T  43626 gttttattaattatgggaccaaaataaaaacttaaaattatttgagggaccaatgaatc 43684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 72 - 182
Target Start/End: Complemental strand, 21237 - 21127
Alignment:
Q  72 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattg 171  Q
    |||||||||| ||| ||||||||||| | ||||| |||||||||| ||||||||||| ||||||||||||||||| |  |||||| ||||||| ||| ||    
T  21237 gatttatttggcaaacggaggaaaaactaagggatcaaaaggtactttttattaattatgggactaaaatgaaaaatgaaaattaattgaggggccaatg 21138  T
Q  172 aatcaaataag 182  Q
     ||| ||||||    
T  21137 gatctaataag 21127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 71 - 181
Target Start/End: Complemental strand, 18923 - 18813
Alignment:
Q  71 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccatt 170  Q
    ||||||||||| ||| ||||| ||||| |||||||| ||||  || |||||||||| | |||||| |||||||||| || ||||||||| | ||| || |    
T  18923 ggatttatttggcaaacggagtaaaaagtgagggactaaaacataagttttattaaatatgggaccaaaatgaaaacttaaaattatttaaaggatcaat 18824  T
Q  171 gaatcaaataa 181  Q
    | |||||||||    
T  18823 ggatcaaataa 18813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1251 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold1251
Description:

Target: scaffold1251; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 99 - 168
Target Start/End: Original strand, 1118 - 1187
Alignment:
Q  99 tgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggacca 168  Q
    |||||||||||||  |  ||||||||| || |||||| |||||||||| | |||||||||||||||||||    
T  1118 tgagggaccaaaacatgagttttattacttatgggaccaaaatgaaaactggaaattatttgagggacca 1187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 156
Target Start/End: Complemental strand, 127596 - 127459
Alignment:
Q  19 cactcttaaggttggtccaccatagacgttttggagttaaagttaacgatttgg-atttatttgacaatcggaggaaaaaatgagggaccaaaaggtacg 117  Q
    |||||||||||||| | |||||||||| |||  | ||||||||||||  |  || |||||||||||   |||||| ||| ||||||||||||||  |  |    
T  127596 cactcttaaggttgtttcaccatagacatttgag-gttaaagttaactgtcagggatttatttgaccgacggaggcaaacatgagggaccaaaacatgag 127498  T
Q  118 ttttattaattgtgggactaaaatgaaaatttgaaatta 156  Q
    |||||||| || |||||| |||| ||||| |||||||||    
T  127497 ttttattagttatgggaccaaaacgaaaacttgaaatta 127459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 168
Target Start/End: Complemental strand, 61961 - 61865
Alignment:
Q  72 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggacca 168  Q
    |||||||||| ||| |||| ||||| ||||||||| |||| |    ||||||||||| || ||| ||||||||||  |||||||||||  |||||||    
T  61961 gatttatttggcaaacggaagaaaagatgagggactaaaacgccatttttattaattatgagaccaaaatgaaaacatgaaattatttaggggacca 61865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University