View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1687_high_60 (Length: 246)
Name: NF1687_high_60
Description: NF1687
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1687_high_60 |
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Alignment Details
Target: chr8 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 23358296 - 23358536
Alignment:
| Q |
1 |
gaaccttacgagcggtcttaataggcaactaacagcttggaagaattgggatgacccttcttcgggtcaaacgacttatggctacataagaagtgacaat |
100 |
Q |
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| T |
23358296 |
gaaccttacgagcggtcttaataggcaactaacagcttggaagaattgggatgacccttcttcgggtcaaacgacttatggctacataagaagtgacaat |
23358395 |
T |
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| Q |
101 |
cctgaatcggagataaggaatggttcgtcgatgatatacagaagtggacctttcaatggtattcgtttcgctgctacacaaaaattgaaacatgttccat |
200 |
Q |
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| T |
23358396 |
cctgaatcggagataaggaatggttcgtcgatgatatacagaagtggacctttcaatggtattcgtttcgctgctacacaaaaattaaaacatgttccat |
23358495 |
T |
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| Q |
201 |
tattcaacgtcgattttgtgtacaaaaaggatgagtattat |
241 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |
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| T |
23358496 |
tattcaacgtcgattttgtgtacaaaaaggatgagtattat |
23358536 |
T |
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