View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1687_low_23 (Length: 423)
Name: NF1687_low_23
Description: NF1687
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1687_low_23 |
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Alignment Details
Target: chr7 (Bit Score: 363; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 363; E-Value: 0
Query Start/End: Original strand, 1 - 415
Target Start/End: Complemental strand, 1410302 - 1409889
Alignment:
| Q |
1 |
ttcatattcaaaggatacgaccctaaacctatcaacaaactcaagtgaaagtggtcagtttaggcttacgagtggattgcattcttttagatggctacga |
100 |
Q |
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| T |
1410302 |
ttcatattcaaatgatacgaccctaaacctatcatcaaactcaagtgaaagtgttcagtttaggcttacgagtggattgcattcttttagatggctacga |
1410203 |
T |
|
| Q |
101 |
ttttgactctttatgtttgtttctcttcaccattggccacaacctgagctatgtttggattgggatttggagtgcgaagcaggtgattcgtcgcggtttt |
200 |
Q |
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| T |
1410202 |
ttttgactctttatgtttgttactcttcaccattggccacaacctgagctgtgtttggtttgggatttggagtgcgaagcaggtgatttgtcgcggtttt |
1410103 |
T |
|
| Q |
201 |
cagtggagcattgtaacttgggataggataccaatatggaatcacaataattagttaaacattgacgaagtaactatcccgacgacacaactgcatgttg |
300 |
Q |
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| T |
1410102 |
caatggagcattgtaacttgggataggataccaatatggaatcacaataattagttaaacattgacgaagtaactatcccgacgacacaactaaatgttg |
1410003 |
T |
|
| Q |
301 |
tttaacatcatttcactgcggacatgctcatgccaaacacaaaacaatgaaatctgatgatagtaaatgattggtcgataacaatgtggcacgacacatt |
400 |
Q |
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| T |
1410002 |
-ttaacatcatttcactgcggacatgctcatgccaaacacaaaacaatgaaatctggtgatagtaaatgattggtcgataacaatgtggcacgacacatt |
1409904 |
T |
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| Q |
401 |
tttcaaacacctatg |
415 |
Q |
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| T |
1409903 |
tttcaaacacctatg |
1409889 |
T |
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