View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1687_low_30 (Length: 410)
Name: NF1687_low_30
Description: NF1687
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1687_low_30 |
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Alignment Details
Target: chr7 (Bit Score: 316; Significance: 1e-178; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 46 - 392
Target Start/End: Complemental strand, 32437511 - 32437164
Alignment:
| Q |
46 |
aagtaaaaggtaatattaatgagacctatatattacatgctcattttcatatctattcatgtagatatggcaaatgtgcataggaactttccttcaacaa |
145 |
Q |
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| T |
32437511 |
aagtaaaaggtaatattaatcagacctatatattacatgctcattttcatatctattcatgtagatatggcaaatgtgcataggaactttccttcaacaa |
32437412 |
T |
|
| Q |
146 |
tcctaataggatttgctcttttagcattattgttctctaacaatgccaaaaccattgcagctcgctttgttccttcaacaacacctcaa-caaatgagca |
244 |
Q |
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||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |
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| T |
32437411 |
tccaaataggatttgctcttttagcattattgttctctaacaatgccaaaaccattgcagctcgctttgttccttcaataacacctcaagcaaatgagca |
32437312 |
T |
|
| Q |
245 |
ttcacttcagagtccaacatgtgtgaaacttggatgcaacaagaaccagcagaataatcttgatccatctcttacccacaaggttgatcatttcttgcaa |
344 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
32437311 |
ttcacttcagagtccaacatgtgtgaaacttggatgcaccaagaaccaacagaataatcttgatccatctcttacccacaaggttgatcatttcttacaa |
32437212 |
T |
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| Q |
345 |
cctagtaatgtttatcgtatttttaggttaagtccaggaggtcctgat |
392 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32437211 |
cctagtaatgtttatcgtatttttaggttaagtccaggaggtcctgat |
32437164 |
T |
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