View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1687_low_42 (Length: 321)

Name: NF1687_low_42
Description: NF1687
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1687_low_42
NF1687_low_42
[»] chr4 (37 HSPs)
chr4 (2-231)||(43901753-43901980)
chr4 (241-321)||(28988473-28988553)
chr4 (241-321)||(1771286-1771366)
chr4 (241-321)||(17619172-17619252)
chr4 (241-321)||(27550309-27550389)
chr4 (241-321)||(27864564-27864644)
chr4 (241-321)||(35017733-35017812)
chr4 (243-321)||(39631102-39631181)
chr4 (242-321)||(41878407-41878486)
chr4 (243-321)||(27893862-27893940)
chr4 (241-321)||(33703141-33703221)
chr4 (241-321)||(45490333-45490413)
chr4 (241-321)||(48463470-48463550)
chr4 (241-321)||(55966366-55966446)
chr4 (243-321)||(43949821-43949900)
chr4 (243-321)||(43514706-43514784)
chr4 (56-138)||(51305282-51305364)
chr4 (26-142)||(34113300-34113417)
chr4 (52-140)||(47492020-47492109)
chr4 (241-321)||(711960-712040)
chr4 (241-321)||(25051693-25051773)
chr4 (241-321)||(27316733-27316813)
chr4 (241-321)||(12496956-12497036)
chr4 (241-321)||(28982842-28982922)
chr4 (241-321)||(55272396-55272476)
chr4 (243-321)||(3756266-3756344)
chr4 (241-321)||(960890-960970)
chr4 (241-321)||(32728357-32728437)
chr4 (241-321)||(48435599-48435679)
chr4 (241-321)||(49229684-49229764)
chr4 (241-320)||(41847971-41848050)
chr4 (243-321)||(31680904-31680982)
chr4 (243-321)||(35037007-35037085)
chr4 (243-321)||(41327563-41327641)
chr4 (243-321)||(43735744-43735822)
chr4 (241-321)||(23035980-23036060)
chr4 (244-308)||(23204811-23204875)
[»] scaffold0119 (1 HSPs)
scaffold0119 (241-321)||(685-765)
[»] chr6 (18 HSPs)
chr6 (241-321)||(26670029-26670109)
chr6 (241-321)||(13743241-13743321)
chr6 (241-321)||(13748741-13748821)
chr6 (241-319)||(3213400-3213478)
chr6 (243-321)||(30735984-30736062)
chr6 (241-321)||(7273355-7273435)
chr6 (241-321)||(7292747-7292827)
chr6 (241-321)||(7367549-7367629)
chr6 (241-321)||(33242403-33242483)
chr6 (241-321)||(9698353-9698433)
chr6 (241-319)||(21293699-21293777)
chr6 (243-321)||(24204007-24204085)
chr6 (241-318)||(31109245-31109322)
chr6 (241-321)||(26466799-26466879)
chr6 (243-321)||(27441544-27441622)
chr6 (241-321)||(21279929-21280009)
chr6 (241-321)||(30014343-30014423)
chr6 (241-321)||(33253913-33253993)
[»] chr3 (25 HSPs)
chr3 (243-321)||(27748565-27748643)
chr3 (241-321)||(42100688-42100768)
chr3 (241-321)||(46941053-46941133)
chr3 (241-321)||(47191046-47191125)
chr3 (241-321)||(4190285-4190365)
chr3 (241-321)||(25413681-25413761)
chr3 (241-321)||(40808865-40808945)
chr3 (241-321)||(45126948-45127028)
chr3 (241-321)||(53273704-53273784)
chr3 (242-321)||(40480750-40480829)
chr3 (241-321)||(10457912-10457992)
chr3 (242-321)||(54237097-54237176)
chr3 (243-321)||(53581878-53581956)
chr3 (241-321)||(24688422-24688502)
chr3 (241-321)||(25996268-25996348)
chr3 (241-321)||(34791829-34791909)
chr3 (241-321)||(36150130-36150210)
chr3 (241-321)||(54246168-54246248)
chr3 (242-321)||(42394439-42394518)
chr3 (243-300)||(1078229-1078286)
chr3 (241-321)||(9434124-9434204)
chr3 (245-321)||(29558254-29558330)
chr3 (241-321)||(52627997-52628077)
chr3 (241-321)||(11064742-11064820)
chr3 (241-321)||(51757593-51757673)
[»] chr7 (26 HSPs)
chr7 (241-321)||(5194251-5194331)
chr7 (241-321)||(35069721-35069801)
chr7 (241-321)||(43317443-43317523)
chr7 (243-321)||(44326180-44326258)
chr7 (244-321)||(26898422-26898499)
chr7 (241-321)||(5015395-5015475)
chr7 (241-321)||(5810944-5811024)
chr7 (241-321)||(24001032-24001112)
chr7 (241-321)||(42538451-42538531)
chr7 (241-321)||(42972852-42972932)
chr7 (241-321)||(45326020-45326100)
chr7 (250-321)||(32029837-32029908)
chr7 (243-321)||(4638219-4638297)
chr7 (243-321)||(10573751-10573829)
chr7 (243-321)||(43343644-43343722)
chr7 (243-321)||(44416954-44417032)
chr7 (241-308)||(39998408-39998475)
chr7 (241-321)||(9216302-9216381)
chr7 (241-321)||(31513287-31513367)
chr7 (241-321)||(40236919-40236999)
chr7 (242-319)||(31408655-31408732)
chr7 (243-321)||(16180377-16180454)
chr7 (243-272)||(1773668-1773697)
chr7 (241-321)||(33384870-33384951)
chr7 (241-298)||(41861674-41861731)
chr7 (241-321)||(24280616-24280696)
[»] chr1 (26 HSPs)
chr1 (241-321)||(43571106-43571186)
chr1 (17-141)||(15504229-15504354)
chr1 (241-319)||(37814778-37814856)
chr1 (241-321)||(750325-750405)
chr1 (241-321)||(5489776-5489856)
chr1 (241-321)||(35000133-35000213)
chr1 (241-321)||(38335918-38335998)
chr1 (241-321)||(48119628-48119708)
chr1 (241-321)||(48498982-48499062)
chr1 (241-309)||(24769531-24769599)
chr1 (241-321)||(35003294-35003374)
chr1 (241-321)||(44112677-44112757)
chr1 (241-321)||(46168383-46168463)
chr1 (243-321)||(4401329-4401408)
chr1 (241-321)||(23989543-23989624)
chr1 (17-140)||(2260079-2260203)
chr1 (241-321)||(45427765-45427845)
chr1 (241-321)||(50448280-50448360)
chr1 (243-321)||(2497582-2497660)
chr1 (243-321)||(7447828-7447905)
chr1 (241-298)||(14427347-14427404)
chr1 (241-321)||(38113215-38113295)
chr1 (241-321)||(41065153-41065233)
chr1 (241-321)||(45639752-45639832)
chr1 (63-141)||(17302328-17302407)
chr1 (241-321)||(45705825-45705905)
[»] chr8 (24 HSPs)
chr8 (241-321)||(29705362-29705442)
chr8 (243-321)||(42295197-42295275)
chr8 (241-321)||(1375542-1375622)
chr8 (243-321)||(20148762-20148840)
chr8 (243-321)||(29800970-29801048)
chr8 (243-321)||(30912582-30912660)
chr8 (241-321)||(5754903-5754983)
chr8 (241-321)||(11582766-11582846)
chr8 (241-321)||(36743503-36743583)
chr8 (243-321)||(42699259-42699337)
chr8 (241-321)||(2165983-2166063)
chr8 (241-321)||(2546996-2547076)
chr8 (241-321)||(30660762-30660842)
chr8 (241-321)||(35181516-35181596)
chr8 (241-321)||(42197455-42197535)
chr8 (243-321)||(26125637-26125715)
chr8 (241-321)||(40528654-40528735)
chr8 (241-321)||(34304788-34304868)
chr8 (242-321)||(45397317-45397396)
chr8 (243-321)||(33630013-33630091)
chr8 (241-321)||(16603646-16603726)
chr8 (241-321)||(18066738-18066818)
chr8 (242-321)||(16358853-16358933)
chr8 (249-321)||(31384672-31384744)
[»] chr5 (14 HSPs)
chr5 (241-321)||(41334683-41334763)
chr5 (241-321)||(7617133-7617213)
chr5 (241-321)||(32473414-32473494)
chr5 (243-321)||(5256997-5257075)
chr5 (241-321)||(2614669-2614749)
chr5 (241-321)||(22512305-22512385)
chr5 (241-319)||(38470579-38470657)
chr5 (241-321)||(18033982-18034062)
chr5 (241-309)||(33855075-33855143)
chr5 (241-321)||(17208074-17208154)
chr5 (243-299)||(25915029-25915085)
chr5 (241-321)||(33801469-33801549)
chr5 (249-321)||(39122453-39122524)
chr5 (62-138)||(11429808-11429888)
[»] chr2 (25 HSPs)
chr2 (241-321)||(13780755-13780835)
chr2 (243-320)||(33229303-33229381)
chr2 (241-321)||(1750414-1750494)
chr2 (241-309)||(16096747-16096815)
chr2 (241-321)||(30838632-30838712)
chr2 (241-321)||(43335783-43335863)
chr2 (243-321)||(41281994-41282072)
chr2 (241-321)||(12302273-12302353)
chr2 (241-309)||(12415492-12415560)
chr2 (241-309)||(12427552-12427620)
chr2 (241-321)||(16803968-16804048)
chr2 (241-321)||(16843250-16843330)
chr2 (241-321)||(18491705-18491785)
chr2 (241-321)||(43114557-43114637)
chr2 (242-321)||(19047158-19047237)
chr2 (242-321)||(34817796-34817875)
chr2 (243-321)||(11825674-11825752)
chr2 (243-321)||(43490421-43490499)
chr2 (241-321)||(4764746-4764826)
chr2 (243-321)||(7070418-7070496)
chr2 (241-314)||(36168589-36168662)
chr2 (241-321)||(966854-966934)
chr2 (241-321)||(34895761-34895841)
chr2 (243-321)||(6518489-6518566)
chr2 (283-321)||(42849878-42849916)
[»] scaffold0385 (1 HSPs)
scaffold0385 (241-321)||(11251-11331)
[»] scaffold0038 (1 HSPs)
scaffold0038 (242-321)||(112656-112735)
[»] scaffold0003 (1 HSPs)
scaffold0003 (243-321)||(45739-45817)
[»] scaffold0187 (2 HSPs)
scaffold0187 (241-321)||(14208-14288)
scaffold0187 (241-321)||(24536-24616)
[»] scaffold0157 (1 HSPs)
scaffold0157 (241-321)||(23441-23521)
[»] scaffold0100 (1 HSPs)
scaffold0100 (241-321)||(35476-35556)


Alignment Details
Target: chr4 (Bit Score: 203; Significance: 1e-111; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 2 - 231
Target Start/End: Complemental strand, 43901980 - 43901753
Alignment:
Q  2 gtgttaactaaaagattagtacttgtttggtttagcagttgtttcaagcaaattacggtggattttcacgttttcacaaaagcttgttttgtagcttcag 101  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  43901980 gtgttaactaaaagattagtacttgtttggtttagcggttgtttcaagcaaattacggtggattttcacgttttcacaaaagcttgctttgtagcttcag 43901881  T
Q  102 gatttccacatccaacttgacttgggacgtgatatttgcaaacctgatccaaacacacgcacttagtggtgtgatatgacatgtacggttgtttgcttgt 201  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  43901880 gatttccacatccaacttgacttgggacgtgatatttgcgaacctgatccaa--acacgcacttagtggtgtgatatgacatgtacggttgtttgcttgt 43901783  T
Q  202 gtggcaagatcacatgcaagtcggttctcc 231  Q
    |||||||||||||||||||||| |||||||    
T  43901782 gtggcaagatcacatgcaagtcagttctcc 43901753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 28988473 - 28988553
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||| |||| | |||||| ||||||||||||||||||    
T  28988473 ggaaaatgttacatgaacaccctttattcatacacctcattgtacaccccatgcactagggacattttgataaattcatct 28988553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 241 - 321
Target Start/End: Complemental strand, 1771366 - 1771286
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||||| ||||||| || ||| ||||||||||| |||||||||| ||||||||||||| |||||||    
T  1771366 ggaaaatgttacatgaacaccctttattcctacaccccattgtacaccccatgtattagagatattttgataagttcatct 1771286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 241 - 321
Target Start/End: Complemental strand, 17619252 - 17619172
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    |||||||||||||||||||||||||| ||||| |||  |||||||||| |||| |||| |||||||||| |||||||||||    
T  17619252 ggaaaatgttacatgaacaccttttaatcatacaccctattgtacaccccatgcattaaggatattttggtaaattcatct 17619172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 27550309 - 27550389
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||||| ||||||  || ||  |||||||||||||||||||||||||||||||| ||| |||||||    
T  27550309 ggaaaatgttacatgaacaccctttatttctacactccattgtacacctcatgtattagggatattttggtaagttcatct 27550389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 27864564 - 27864644
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    |||||||||||||| |||||| |||||||||| | | ||||||||||| |||||||||||||||||||| ||| |||||||    
T  27864564 ggaaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaagttcatct 27864644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 35017733 - 35017812
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||||| ||||||| |||| ||||||||||||| |||||| ||||||||||||| ||| |||||||    
T  35017733 ggaaaatgttacatgaacaccctttattcctatatctcattgtacaccccatgta-tagggatattttggtaagttcatct 35017812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 243 - 321
Target Start/End: Original strand, 39631102 - 39631181
Alignment:
Q  243 aaaatgttacatgaacacc-ttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    |||||| ||||||||| || |||||||| || |||||||||||||||||||||||||||||||||||| ||| |||||||    
T  39631102 aaaatgatacatgaacccccttttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatct 39631181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 242 - 321
Target Start/End: Original strand, 41878407 - 41878486
Alignment:
Q  242 gaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    |||||||||||||||||||  |||||||||| |||||||||||||||  ||  ||||||||||||||||||| |||||||    
T  41878407 gaaaatgttacatgaacactctttattcatacacctcattgtacaccctatccattagggatattttgataagttcatct 41878486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 243 - 321
Target Start/End: Complemental strand, 27893940 - 27893862
Alignment:
Q  243 aaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    |||||||||||| |||||| |||||||||| | | ||||||||||| |||||||||||||||||||| ||| |||||||    
T  27893940 aaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaatttcatct 27893862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 33703141 - 33703221
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||||| ||||||  || | || |||||||||| |||||||||||||||||||| ||| |||||||    
T  33703141 ggaaaatgttacatgaacaccctttatttctacatcttattgtacaccccatgtattagggatattttggtaagttcatct 33703221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 321
Target Start/End: Complemental strand, 45490413 - 45490333
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    |||||||||||||||||||| ||||||| ||| | |  |||||||||||||||||||||||||| |||  |||||||||||    
T  45490413 ggaaaatgttacatgaacacattttatttatacatccaattgtacacctcatgtattagggatactttagtaaattcatct 45490333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 321
Target Start/End: Complemental strand, 48463550 - 48463470
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    |||||||||||||| |||||| |||||||||| |  |||||||||| | |||||||||||||||||||| ||| |||||||    
T  48463550 ggaaaatgttacataaacaccatttattcatacatttcattgtacatcccatgtattagggatattttggtaagttcatct 48463470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 321
Target Start/End: Complemental strand, 55966446 - 55966366
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    |||||||||||||| |||||| |||||||||| | | ||||||||| | |||||||||||||||||||| ||| |||||||    
T  55966446 ggaaaatgttacataaacaccctttattcatacatcccattgtacatcccatgtattagggatattttggtaagttcatct 55966366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 243 - 321
Target Start/End: Complemental strand, 43949900 - 43949821
Alignment:
Q  243 aaaatgttacatgaacacc-ttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    |||||| |||||||||||| |||||||| |  ||||||||||||||| |||||||||||||||||||| ||| |||||||    
T  43949900 aaaatgatacatgaacacccttttattcctgcacctcattgtacaccccatgtattagggatattttggtaagttcatct 43949821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 243 - 321
Target Start/End: Complemental strand, 43514784 - 43514706
Alignment:
Q  243 aaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||| ||||||| || ||  |||||||||| ||||||||||||| ||||||| ||| |||||||    
T  43514784 aaaatgttacatgaacaccctttattcctacactccattgtacacttcatgtattagggttattttggtaagttcatct 43514706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 56 - 138
Target Start/End: Original strand, 51305282 - 51305364
Alignment:
Q  56 acggtggattttcacgttttcacaaaagcttgttttgtagcttcaggatttccacatccaacttgacttgggacgtgatattt 138  Q
    |||||| ||||||| |||||||||||| |||||||| ||| || || |||| ||||||||||||| || ||||||||||||||    
T  51305282 acggtgaattttcatgttttcacaaaaacttgttttttagtttgagaattttcacatccaacttgcctcgggacgtgatattt 51305364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 26 - 142
Target Start/End: Complemental strand, 34113417 - 34113300
Alignment:
Q  26 gtttggtttagcagttgtttcaagcaaattacggtggattttcacgttttcacaaaagctt-gttttgtagcttcaggatttccacatccaacttgactt 124  Q
    ||||||||||||| | ||||| ||  ||| |||||||||||||||||||||||||||| ||  ||||||| ||||| |||||| |||||||  ||  ||     
T  34113417 gtttggtttagcaatggtttctagagaatcacggtggattttcacgttttcacaaaagtttacttttgtaccttcaagatttctacatccagtttatctc 34113318  T
Q  125 gggacgtgatatttgcaa 142  Q
    ||||||||||||| ||||    
T  34113317 gggacgtgatattcgcaa 34113300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 47492109 - 47492020
Alignment:
Q  52 aattacggtggattttcacgttttcacaaaagctt-gttttgtagcttcaggatttccacatccaacttgacttgggacgtgatatttgc 140  Q
    ||||||||||||||||||||||||||||||| |||  ||||||| ||||||||||||||  |||| |||| ||   ||||||||||||||    
T  47492109 aattacggtggattttcacgttttcacaaaatcttacttttgtaacttcaggatttccatgtccagcttgcctctagacgtgatatttgc 47492020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 711960 - 712040
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||||| |||| ||||| |||  ||||||||||  ||| |||| |||||||||| |||||||||||    
T  711960 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccctatgcattaaggatattttggtaaattcatct 712040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 25051693 - 25051773
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||| ||||||||||  ||||||| || ||| |||||||||||  ||||||||||||||||||| ||| |||||||    
T  25051693 ggaaaatgtcacatgaacacactttattcctacaccccattgtacaccctatgtattagggatattttggtaagttcatct 25051773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 241 - 321
Target Start/End: Complemental strand, 27316813 - 27316733
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||| | ||||||| ||||||| || |||||||| |||||| ||||||||| |||||||||| ||| |||||||    
T  27316813 ggaaaatgttaaacgaacaccctttattcctacacctcattatacaccccatgtattaaggatattttggtaagttcatct 27316733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 12496956 - 12497036
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||| ||||||||| ||||||| || ||  ||||||||| | |||||||||| ||||||||| ||| |||||||    
T  12496956 ggaaaatgttatatgaacaccctttattcctacactccattgtacatcccatgtattagagatattttggtaagttcatct 12497036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 241 - 321
Target Start/End: Complemental strand, 28982922 - 28982842
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||||| ||||||  || |||  |||||||| | ||| |||||||||||||||| ||| |||||||    
T  28982922 ggaaaatgttacatgaacaccctttatttctacaccctattgtacatcccatatattagggatattttggtaagttcatct 28982842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 241 - 321
Target Start/End: Complemental strand, 55272476 - 55272396
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||| | |||| ||||| ||   |||||||||| |||| |||| |||||||||| |||||||||||    
T  55272476 ggaaaatgttacatgaacatcctttaatcatacactctattgtacaccccatgcattaaggatattttggtaaattcatct 55272396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 321
Target Start/End: Complemental strand, 3756344 - 3756266
Alignment:
Q  243 aaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||| |||| ||||| |||  |||||||||| |||| |||| |||||||||  |||||| ||||    
T  3756344 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattaaggatattttagtaaatttatct 3756266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 321
Target Start/End: Complemental strand, 960970 - 960890
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||||| |||| ||||| ||   ||||||||||  ||  |||||||| |||||| |||||||||||    
T  960970 ggaaaatgttacatgaacaccctttaatcatacactctattgtacaccctatacattagggacattttggtaaattcatct 960890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 32728357 - 32728437
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||| | |||| ||||| |||  |||||||||| |||| |||| ||| |||||  |||||||||||    
T  32728357 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacattttagtaaattcatct 32728437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 321
Target Start/End: Complemental strand, 48435679 - 48435599
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||| ||||||||||||||| |||| ||| | |||  |||||||||| |||| |||||||| || ||| |||||||||||    
T  48435679 ggaaagtgttacatgaacaccatttaatcacacaccctattgtacaccccatgcattagggacatattggtaaattcatct 48435599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 321
Target Start/End: Complemental strand, 49229764 - 49229684
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||| ||||||| | |||| ||||| |||  ||||||||| ||||| |||| ||||||| || |||||||||||    
T  49229764 ggaaaatgttatatgaacatcctttaatcatacaccctattgtacacttcatgcattaaggatattctggtaaattcatct 49229684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 41847971 - 41848050
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatc 320  Q
    ||||||||||||| ||||| | ||| |||| | ||||||||||||||| |||| ||||| || ||||||  |||||||||    
T  41847971 ggaaaatgttacaagaacatccttttttcacacacctcattgtacaccccatgcattagagacattttggcaaattcatc 41848050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 321
Target Start/End: Original strand, 31680904 - 31680982
Alignment:
Q  243 aaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    |||||||||| | |||||| |||||||||| |   ||||||||||| | | |||||||||||||||| ||| |||||||    
T  31680904 aaaatgttacgtaaacaccatttattcatacattccattgtacaccccgtatattagggatattttggtaagttcatct 31680982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 321
Target Start/End: Original strand, 35037007 - 35037085
Alignment:
Q  243 aaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    |||||||||||||| |||| ||||  |||| ||   |||||||||| |||| |||| |||||||||| |||||||||||    
T  35037007 aaaatgttacatgagcaccctttaaccatacactctattgtacaccccatgcattaaggatattttggtaaattcatct 35037085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 321
Target Start/End: Complemental strand, 41327641 - 41327563
Alignment:
Q  243 aaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||  ||||| |||||||| | ||| |||||||||||| ||| | || ||| |||||| |||||||||||    
T  41327641 aaaatgttacatagacaccctttattcacacaccccattgtacaccttatgcactacggacattttggtaaattcatct 41327563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 321
Target Start/End: Original strand, 43735744 - 43735822
Alignment:
Q  243 aaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||| ||||||||||| | ||||||| || | |||||| ||||   |||||||||| ||||||||||||| |||||||    
T  43735744 aaaatattacatgaacatcctttattcctacatctcattatacattccatgtattagagatattttgataagttcatct 43735822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 23035980 - 23036060
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||  | ||||||| || |||  ||||||||||  || |||||||||||||||  ||| |||||||    
T  23035980 ggaaaatgttacatgaacctcctttattcctacaccctattgtacaccctatatattagggatatttttgtaagttcatct 23036060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 308
Target Start/End: Complemental strand, 23204875 - 23204811
Alignment:
Q  244 aaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatatttt 308  Q
    |||||||||||||||||  ||||||| || | | ||||||||| |  ||||||||||||||||||    
T  23204875 aaatgttacatgaacactctttattcctacatcccattgtacatcctatgtattagggatatttt 23204811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 685 - 765
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||||| ||||||| || |||||||||||||||||||||||||||||||||||| ||| |||||||    
T  685 ggaaaatgttacatgaacaccctttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatct 765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 4e-26; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 241 - 321
Target Start/End: Complemental strand, 26670109 - 26670029
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||||| ||||||| || |||||||||||||||||||||||||||||||||||| ||| |||||||    
T  26670109 ggaaaatgttacatgaacaccctttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatct 26670029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 241 - 321
Target Start/End: Complemental strand, 13743321 - 13743241
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    |||||||||||||||||||||||||||||||| | |  |||||||||| |||||||||||||||||||| ||| |||||||    
T  13743321 ggaaaatgttacatgaacaccttttattcatacatccaattgtacaccccatgtattagggatattttggtaagttcatct 13743241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 241 - 321
Target Start/End: Complemental strand, 13748821 - 13748741
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    |||||||||||||||||||||||||||||||| | |  |||||||||| |||||||||||||||||||| ||| |||||||    
T  13748821 ggaaaatgttacatgaacaccttttattcatacatccaattgtacaccccatgtattagggatattttggtaagttcatct 13748741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 241 - 319
Target Start/End: Original strand, 3213400 - 3213478
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcat 319  Q
    |||||||||||||| |||||| |||||||||| | ||||||||||||| ||||||||| |||||||||| |||||||||    
T  3213400 ggaaaatgttacataaacaccctttattcatacatctcattgtacaccccatgtattaaggatattttggtaaattcat 3213478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 243 - 321
Target Start/End: Original strand, 30735984 - 30736062
Alignment:
Q  243 aaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    |||||||||||||||||| |||||||| || ||| |||||||||||||||||||||| ||||||||| ||| |||||||    
T  30735984 aaaatgttacatgaacactttttattcctacaccccattgtacacctcatgtattagtgatattttggtaagttcatct 30736062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 241 - 321
Target Start/End: Complemental strand, 7273435 - 7273355
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||||| ||||||| || |||| |||||||||| |||||||||| ||||||||| ||| |||||||    
T  7273435 ggaaaatgttacatgaacaccctttattcctacaccttattgtacaccccatgtattagagatattttggtaagttcatct 7273355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 7292747 - 7292827
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||| ||||||| |||||||||| |||||||| ||||||  ||||||||||||||||||| ||| |||||||    
T  7292747 ggaaaatgttacaagaacaccatttattcatacacctcattatacaccctatgtattagggatattttggtaagttcatct 7292827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 7367549 - 7367629
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||| ||||||| | |||||||||| ||||||||||||| | |||||||||||||||||||| ||| |||||||    
T  7367549 ggaaaatgttatatgaacatcatttattcatacacctcattgtacatcccatgtattagggatattttggtaagttcatct 7367629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 33242403 - 33242483
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||||| |||| ||||| |||| |||||||||| ||||||||| ||| |||||| |||||||||||    
T  33242403 ggaaaatgttacatgaacaccatttaatcatacaccttattgtacaccccatgtattaaggacattttggtaaattcatct 33242483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 321
Target Start/End: Complemental strand, 9698433 - 9698353
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||||| ||||||| || | | |||||||||||  ||||||||||||||||||| ||| |||||||    
T  9698433 ggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatct 9698353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 241 - 319
Target Start/End: Complemental strand, 21293777 - 21293699
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcat 319  Q
    |||||||||||||| |||||| |||||||||| |  ||| |||||||| ||||||||| |||||||||| |||||||||    
T  21293777 ggaaaatgttacataaacaccctttattcatacatttcactgtacaccccatgtattaaggatattttggtaaattcat 21293699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 243 - 321
Target Start/End: Complemental strand, 24204085 - 24204007
Alignment:
Q  243 aaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||| ||||||| || |||  |||||||||  |||||||||||||||||||| ||| |||||||    
T  24204085 aaaatgttacatgaacaccatttattcctacaccctattgtacactccatgtattagggatattttggtaagttcatct 24204007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 241 - 318
Target Start/End: Complemental strand, 31109322 - 31109245
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattca 318  Q
    ||||||||||||||||||||| |||| ||||| | | |||| |||||| |||| | ||||||||||||||||||||||    
T  31109322 ggaaaatgttacatgaacaccctttaatcatacatcccattatacaccccatgcactagggatattttgataaattca 31109245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 26466799 - 26466879
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    |||||||||||||| |||||| ||||||| || ||| ||||||||||  |||||||||||| ||||||| ||| |||||||    
T  26466799 ggaaaatgttacataaacaccctttattcctacaccccattgtacactccatgtattagggttattttggtaagttcatct 26466879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 243 - 321
Target Start/End: Original strand, 27441544 - 27441622
Alignment:
Q  243 aaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||| |||| ||||| |||  |||||||| |  |||||||| |||||||||| |||||||||||    
T  27441544 aaaatgttacatgaacaccctttaatcatacaccctattgtacatcctatgtattaaggatattttggtaaattcatct 27441622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 21279929 - 21280009
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||||| ||||||  || |   ||||| ||| | |||||||||||||||||||| |||||||||||    
T  21279929 ggaaaatgttacatgaacaccctttatttctacattccattgcacatcccatgtattagggatattttggtaaattcatct 21280009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 30014343 - 30014423
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||||| ||||||| || | | |||| |||| | ||||||||||| |||||||| ||| |||||||    
T  30014343 ggaaaatgttacatgaacaccctttattcctacatcccattatacatcccatgtattaggcatattttggtaagttcatct 30014423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 33253913 - 33253993
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||||| |||| ||| | |||  |||||||||| |||| |||||||| || ||| |||||||||||    
T  33253913 ggaaaatgttacatgaacaccatttaatcacacaccctattgtacaccccatgcattagggacatattggtaaattcatct 33253993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 5e-25; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 243 - 321
Target Start/End: Original strand, 27748565 - 27748643
Alignment:
Q  243 aaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||| ||| |||||||    
T  27748565 aaaatgttacatgaacaccttttattcatacacctcattatacaccttatgtattagggatattttggtaagttcatct 27748643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 42100688 - 42100768
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||||| ||||||| || ||||||||||||||| |||||||||||||||||||| ||| |||||||    
T  42100688 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatct 42100768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 46941053 - 46941133
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||||| ||||||| || | ||||||||||||| |||||||||||||||||||| ||| |||||||    
T  46941053 ggaaaatgttacatgaacaccctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatct 46941133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 241 - 321
Target Start/End: Complemental strand, 47191125 - 47191046
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||||| ||||||| || ||||||||||||||| |||||||||| ||||||||||||| |||||||    
T  47191125 ggaaaatgttacatgaacaccctttattcctacacctcattgtacacc-catgtattagagatattttgataagttcatct 47191046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 241 - 321
Target Start/End: Complemental strand, 4190365 - 4190285
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||||| |||| ||||| |||  ||||||||||| ||||||||| ||||||||| |||||||||||    
T  4190365 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccttatgtattagagatattttggtaaattcatct 4190285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 25413681 - 25413761
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||||| ||||||| || ||| |||||||||||| ||||||||||||||||||  ||| |||||||    
T  25413681 ggaaaatgttacatgaacaccctttattcctacaccccattgtacaccttatgtattagggatatttttgtaagttcatct 25413761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 40808865 - 40808945
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    |||||||||||||| |||||| ||||||| || ||| ||||||||||| |||||||||||||||||||| ||| |||||||    
T  40808865 ggaaaatgttacatcaacaccatttattcctacaccccattgtacaccccatgtattagggatattttggtaagttcatct 40808945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 241 - 321
Target Start/End: Complemental strand, 45127028 - 45126948
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    |||||||||||||| |||||| |||||||||| | | ||||||||||| |||||||||||||||||||| ||| |||||||    
T  45127028 ggaaaatgttacataaacaccctttattcatacatcccattgtacaccccatgtattagggatattttggtaagttcatct 45126948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 241 - 321
Target Start/End: Complemental strand, 53273784 - 53273704
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||| ||||||| | ||||||| |||||||||||||||| | |||||||||||||||||||| ||| |||||||    
T  53273784 ggaaaatgttatatgaacatcatttattcctatacctcattgtacatcccatgtattagggatattttggtaagttcatct 53273704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 242 - 321
Target Start/End: Original strand, 40480750 - 40480829
Alignment:
Q  242 gaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    |||||||||||||||||||| ||||||||||| || ||||||||| |  ||||||||||||||||||| ||| |||||||    
T  40480750 gaaaatgttacatgaacaccctttattcatatgccccattgtacatcctatgtattagggatattttggtaagttcatct 40480829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 321
Target Start/End: Complemental strand, 10457992 - 10457912
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    |||||||||||||||||||||||||| ||||| |||  |||||||||| |||| |||| |||||||||| |||||| ||||    
T  10457992 ggaaaatgttacatgaacaccttttaatcatacaccctattgtacaccccatgcattaaggatattttggtaaatttatct 10457912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 242 - 321
Target Start/End: Original strand, 54237097 - 54237176
Alignment:
Q  242 gaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    |||||||||||||||||||| ||||||| || | | |||||||||||  ||||||||||||||||||| ||| |||||||    
T  54237097 gaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatct 54237176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 243 - 321
Target Start/End: Complemental strand, 53581956 - 53581878
Alignment:
Q  243 aaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||  |||||||||| ||  ||||||||| |  ||||||||||||||||||||||| |||||||    
T  53581956 aaaatgttacatgaacactctttattcatacactccattgtacatcctatgtattagggatattttgataagttcatct 53581878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 241 - 321
Target Start/End: Complemental strand, 24688502 - 24688422
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||||| ||||||  || ||  |||||||||||  ||||||||||||||||||| ||| |||||||    
T  24688502 ggaaaatgttacatgaacaccctttatttctacactccattgtacaccctatgtattagggatattttggtaagttcatct 24688422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 25996268 - 25996348
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||||| |||| ||||| | || |||||||||| ||| ||||| ||| |||||| |||||||||||    
T  25996268 ggaaaatgttacatgaacaccctttaatcatacatcttattgtacaccccatatattaaggacattttggtaaattcatct 25996348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 34791829 - 34791909
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||||| |||| ||||| |||  |||||| |||||||| |||||||| ||||| |||| |||||||    
T  34791829 ggaaaatgttacatgaacaccctttaatcatacaccatattgtaaacctcatgcattagggacattttaataatttcatct 34791909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 36150130 - 36150210
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||| ||| |||||||||| ||| |||| ||||||  |||||| |||||||||||| ||| |||||||    
T  36150130 ggaaaatgttacatgaataccctttattcatacaccccattatacaccctatgtatcagggatattttggtaagttcatct 36150210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 241 - 321
Target Start/End: Complemental strand, 54246248 - 54246168
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||||| ||||||| || ||| |||||||||||  ||||||||| ||||||||  ||| |||||||    
T  54246248 ggaaaatgttacatgaacaccctttattcctacaccccattgtacaccctatgtattagagatatttttgtaagttcatct 54246168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 321
Target Start/End: Complemental strand, 42394518 - 42394439
Alignment:
Q  242 gaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    |||||||||||||||||||| ||||||| || |   |||||||||||  ||||||||||||||||||| ||| |||||||    
T  42394518 gaaaatgttacatgaacaccctttattcctacattccattgtacaccctatgtattagggatattttggtaagttcatct 42394439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 300
Target Start/End: Original strand, 1078229 - 1078286
Alignment:
Q  243 aaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagg 300  Q
    ||||||||||||||||||| ||||||| |  |||||||||||||||| ||||||||||    
T  1078229 aaaatgttacatgaacaccctttattcctgcacctcattgtacacctaatgtattagg 1078286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 9434124 - 9434204
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||||| |||| ||||| ||   |||||||||| |||| |||||||| |||||| ||| |||||||    
T  9434124 ggaaaatgttacatgaacaccctttaatcatacactctattgtacaccccatgcattagggacattttggtaatttcatct 9434204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 245 - 321
Target Start/End: Complemental strand, 29558330 - 29558254
Alignment:
Q  245 aatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||| ||||||||| |||||||||| | |||||||||||||  || ||||||| |||| ||| |||||||||||    
T  29558330 aatgttatatgaacaccctttattcatacatctcattgtacaccctatatattaggaatatattggtaaattcatct 29558254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 241 - 321
Target Start/End: Complemental strand, 52628077 - 52627997
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    |||||||||||| |||||||| |||| ||||| | |  ||||||||||||||| |||| | |||||||| |||||||||||    
T  52628077 ggaaaatgttacgtgaacaccctttaatcatacatcctattgtacacctcatgcattaagtatattttggtaaattcatct 52627997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 241 - 321
Target Start/End: Complemental strand, 11064820 - 11064742
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    |||||||||||  |||||| | |||||||||| |||||||||||||||  |||  |||| ||||||||||| |||||||||    
T  11064820 ggaaaatgtta--tgaacatcatttattcatacacctcattgtacaccctatgctttagagatattttgattaattcatct 11064742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 51757593 - 51757673
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||| |||||| |||||| |||| ||||| |||  ||||||||||||||| |||| ||| |||||  ||| |||||||    
T  51757593 ggaaaatattacataaacaccctttaatcatacaccctattgtacacctcatgcattatggacattttagtaatttcatct 51757673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 9e-24; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 241 - 321
Target Start/End: Complemental strand, 5194331 - 5194251
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||||| |||||||||| |||||||||||||||  |||| ||| ||||||||||||||||||||||    
T  5194331 ggaaaatgttacatgaacaccatttattcatacacctcattgtacaccctatgttttaaggatattttgataaattcatct 5194251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 35069721 - 35069801
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||||  ||||||| || |||||||||||||||||||||||||||||||||||| ||| |||||||    
T  35069721 ggaaaatgttacatgaacactctttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatct 35069801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 43317443 - 43317523
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||| |  |||  ||||||||||||||||||||||||||    
T  43317443 ggaaaatgttacatgaacaccatttattcatacacctcattgtacatcctatgctttagggatattttgataaattcatct 43317523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 243 - 321
Target Start/End: Original strand, 44326180 - 44326258
Alignment:
Q  243 aaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    |||||||||||| |||||| |||||||||| | | ||||||||||||||| |||||||||||||||| ||| |||||||    
T  44326180 aaaatgttacataaacaccctttattcatacatcccattgtacacctcatatattagggatattttggtaagttcatct 44326258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 244 - 321
Target Start/End: Complemental strand, 26898499 - 26898422
Alignment:
Q  244 aaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||||||||||||| |||  ||||||||   |||||||||||||||||||| ||| |||||||    
T  26898499 aaatgttacatgaacaccttttattcatacacccaattgtacattccatgtattagggatattttggtaagttcatct 26898422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 5015395 - 5015475
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||||  ||||||  || ||  |||||||||||||||||||||||||||||||| ||| |||||||    
T  5015395 ggaaaatgttacatgaacactctttatttctacactccattgtacacctcatgtattagggatattttggtaagttcatct 5015475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 321
Target Start/End: Complemental strand, 5811024 - 5810944
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    |||||||||||||||| |||| ||||||| || ||| |||||||||||  || |||||||||||||||||||| |||||||    
T  5811024 ggaaaatgttacatgaccaccctttattcctacaccccattgtacaccctatatattagggatattttgataagttcatct 5810944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 321
Target Start/End: Complemental strand, 24001112 - 24001032
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||||| ||||||| || | | |||||||||||  ||||||||||||||||||| ||| |||||||    
T  24001112 ggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatct 24001032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 321
Target Start/End: Complemental strand, 42538531 - 42538451
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||||| ||||||| || | | |||||||||||  ||||||||||||||||||| ||| |||||||    
T  42538531 ggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatct 42538451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 42972852 - 42972932
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    |||||||||||| |||||| | ||||||| || ||  |||||||||||||||||||||||||||||||| ||| |||||||    
T  42972852 ggaaaatgttacctgaacatcctttattcctacactccattgtacacctcatgtattagggatattttggtaagttcatct 42972932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 45326020 - 45326100
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||| |||||||| ||||||||||||||||| | | ||||||||||| ||| |||||||||||||||| ||| |||||||    
T  45326020 ggaaagtgttacataaacaccttttattcatacatcacattgtacaccccatatattagggatattttggtaagttcatct 45326100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 250 - 321
Target Start/End: Complemental strand, 32029908 - 32029837
Alignment:
Q  250 tacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||| ||||| |||||||| || ||| ||||||||||| |||||||||||||||||||| |||||||||||    
T  32029908 tacataaacactttttattcctacaccccattgtacaccccatgtattagggatattttggtaaattcatct 32029837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 243 - 321
Target Start/End: Complemental strand, 4638297 - 4638219
Alignment:
Q  243 aaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    |||||||||||||||||||||||||||||| ||   |||||||||| ||| ||||| |||||||||| ||| |||||||    
T  4638297 aaaatgttacatgaacaccttttattcatacactcaattgtacaccccatatattatggatattttggtaagttcatct 4638219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 243 - 321
Target Start/End: Original strand, 10573751 - 10573829
Alignment:
Q  243 aaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    |||||||||||| |||||| |||||||||| | |  |||||||||| ||||||||||| |||||||| |||||||||||    
T  10573751 aaaatgttacataaacaccctttattcatacatcctattgtacaccccatgtattaggaatattttggtaaattcatct 10573829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 243 - 321
Target Start/End: Complemental strand, 43343722 - 43343644
Alignment:
Q  243 aaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||| | ||||||  || |||  |||||||||| |||||||||||||||||||||||| |||||||    
T  43343722 aaaatgttacatgaacatcatttatttctacaccctattgtacaccccatgtattagggatattttgataagttcatct 43343644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 243 - 321
Target Start/End: Complemental strand, 44417032 - 44416954
Alignment:
Q  243 aaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||| | ||||||  || |||  |||||||||| |||||||||||||||||||||||| |||||||    
T  44417032 aaaatgttacatgaacatcatttatttctacaccctattgtacaccccatgtattagggatattttgataagttcatct 44416954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 241 - 308
Target Start/End: Original strand, 39998408 - 39998475
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatatttt 308  Q
    |||||||||||||||||||| ||||| ||||| | |  |||||||||| |||||||||||||||||||    
T  39998408 ggaaaatgttacatgaacacattttaatcatacatcctattgtacaccccatgtattagggatatttt 39998475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 9216302 - 9216381
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||||| ||||||| |||| |  |||||||||| |||| ||||| ||||||||| ||| |||||||    
T  9216302 ggaaaatgttacatgaacaccctttattcctatatcctattgtacacc-catgcattagagatattttggtaagttcatct 9216381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 31513287 - 31513367
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||||  |||| ||||| |||  |||||| ||| |||| |||| |||||||||| |||||||||||    
T  31513287 ggaaaatgttacatgaacactctttaatcatacaccctattgtataccccatgcattaaggatattttggtaaattcatct 31513367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 40236919 - 40236999
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||||| |||| ||||| | |  |||||||||| |||| |||||||| |||||| ||| |||||||    
T  40236919 ggaaaatgttacatgaacaccctttaatcatacatcctattgtacaccccatgcattagggacattttggtaatttcatct 40236999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 319
Target Start/End: Complemental strand, 31408732 - 31408655
Alignment:
Q  242 gaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcat 319  Q
    |||||||||||||||||||| |||| ||||| ||   |||||||| | |||| |||| |||||||||| |||||||||    
T  31408732 gaaaatgttacatgaacaccctttaatcatacactctattgtacatcccatgcattaaggatattttggtaaattcat 31408655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 321
Target Start/End: Complemental strand, 16180454 - 16180377
Alignment:
Q  243 aaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    |||||||||||| |||||| ||||||| || ||| ||||||||||| || ||||||   |||||||| |||||||||||    
T  16180454 aaaatgttacatcaacaccatttattcctacacc-cattgtacaccccacgtattataaatattttggtaaattcatct 16180377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 272
Target Start/End: Original strand, 1773668 - 1773697
Alignment:
Q  243 aaaatgttacatgaacaccttttattcata 272  Q
    ||||||||||||||||||||||||||||||    
T  1773668 aaaatgttacatgaacaccttttattcata 1773697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 33384870 - 33384951
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctc-attgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||| | |||| ||||| ||| | |||||| ||  |||| |||||||| |||||| |||||||||||    
T  33384870 ggaaaatgttacatgaacatcatttaatcatacacccctattgtatactccatgcattagggacattttggtaaattcatct 33384951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 298
Target Start/End: Original strand, 41861674 - 41861731
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtatta 298  Q
    ||||||||||||||||||||| |||||||||| |||  ||| ||||||  ||||||||    
T  41861674 ggaaaatgttacatgaacaccctttattcatacacccaattatacaccctatgtatta 41861731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 241 - 321
Target Start/End: Complemental strand, 24280696 - 24280616
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    |||||||||||| |||||||| |||||||||| |||  ||| |||| | |||| | |||  |||||||| |||||||||||    
T  24280696 ggaaaatgttacgtgaacaccctttattcatacaccctattctacatcccatgcactagaaatattttggtaaattcatct 24280616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 9e-24; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 241 - 321
Target Start/End: Complemental strand, 43571186 - 43571106
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||||| ||||||| || ||||||||||||||| |||||||||||||||||||| ||| |||||||    
T  43571186 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatct 43571106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 17 - 141
Target Start/End: Complemental strand, 15504354 - 15504229
Alignment:
Q  17 ttagtacttgtttggtttagcagttgtttcaagcaaattacggtggattttcacgttttcacaaaagctt-gttttgtagcttcaggatttccacatcca 115  Q
    ||||| || |||||||||||| || ||| | || |||| |||||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||    
T  15504354 ttagtgctcgtttggtttagcggtggttactagaaaatcacggtggattttcacgttttcacaaaagcttacttttgtagcttcaggatttccacgtcca 15504255  T
Q  116 acttgacttgggacgtgatatttgca 141  Q
     |||  || |  ||||||||||||||    
T  15504254 gcttacctcgaaacgtgatatttgca 15504229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 241 - 319
Target Start/End: Original strand, 37814778 - 37814856
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcat 319  Q
    |||||||||||||| |||||| |||||||||| | ||||||||||||| ||||||||| |||||||||| |||||||||    
T  37814778 ggaaaatgttacataaacaccctttattcatacatctcattgtacaccccatgtattaaggatattttggtaaattcat 37814856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 321
Target Start/End: Complemental strand, 750405 - 750325
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    |||||||||||| |||||||| ||  ||| || ||| ||||||||||| ||||||| ||||||||||||||||||||||||    
T  750405 ggaaaatgttacgtgaacacccttatttcctacaccccattgtacaccccatgtatcagggatattttgataaattcatct 750325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 5489776 - 5489856
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||||| ||||||| || | | |||||||||||  ||||||||||||||||||| ||| |||||||    
T  5489776 ggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatct 5489856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 321
Target Start/End: Complemental strand, 35000213 - 35000133
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    |||||||||||||||||||||||||| ||||| ||   |||||| || |||||||||||||| ||||||||||||| ||||    
T  35000213 ggaaaatgttacatgaacaccttttaatcatacactctattgtatacttcatgtattagggacattttgataaatttatct 35000133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 38335918 - 38335998
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||||| |||| ||||| |||| |||||||| | |||| |||| |||||||||| |||||||||||    
T  38335918 ggaaaatgttacatgaacaccctttaatcatacaccttattgtacatcccatgcattaaggatattttggtaaattcatct 38335998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 48119628 - 48119708
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||||| |||| ||||| |||  |||||||||| |||| |||| |||||||||| |||||||||||    
T  48119628 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattaaggatattttggtaaattcatct 48119708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 321
Target Start/End: Complemental strand, 48499062 - 48498982
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||||  ||||||  || ||  |||||||||||||||||||||||||||||||| ||| |||||||    
T  48499062 ggaaaatgttacatgaacactctttatttctacactccattgtacacctcatgtattagggatattttggtaagttcatct 48498982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 241 - 309
Target Start/End: Complemental strand, 24769599 - 24769531
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttg 309  Q
    |||||||||| |||||||||||||||||  || ||  ||||||||||| ||||||||||||||||||||    
T  24769599 ggaaaatgtttcatgaacaccttttatttctacactccattgtacaccccatgtattagggatattttg 24769531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 35003294 - 35003374
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||||| |||| ||||| |||  |||||||||| |||  |||| |||||||||| |||||||||||    
T  35003294 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatacattaaggatattttggtaaattcatct 35003374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 44112677 - 44112757
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||||| |||| ||||| |||  |||||||||| |||| |||||||| |||||| ||| |||||||    
T  44112677 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatct 44112757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 46168383 - 46168463
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||||| |||| ||||||| |  ||||||||||  ||| |||| |||||||||| |||||||||||    
T  46168383 ggaaaatgttacatgaacaccctttaatcatatatcctattgtacacccaatgcattaaggatattttggtaaattcatct 46168463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 243 - 321
Target Start/End: Original strand, 4401329 - 4401408
Alignment:
Q  243 aaaatgttacatgaacac-cttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    |||||| ||||||||||| ||||||||| || || |||||||||||| |||||||||| ||||||||| ||| |||||||    
T  4401329 aaaatgatacatgaacactcttttattcctacacttcattgtacaccccatgtattagagatattttggtaagttcatct 4401408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 241 - 321
Target Start/End: Complemental strand, 23989624 - 23989543
Alignment:
Q  241 ggaaaatgttacatgaacacc-ttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||||| ||||||||||| ||   |||||| |||  ||||||||||||||||||| |||||| ||||    
T  23989624 ggaaaatgttacatgaacacccttttattcatacactcaattgtataccctatgtattagggatattttggtaaatttatct 23989543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 17 - 140
Target Start/End: Original strand, 2260079 - 2260203
Alignment:
Q  17 ttagtacttgtttggtttagcagttgtttcaagcaaattacggtggattttcacgttttcacaaaagcttg-ttttgtagcttcaggatttccacatcca 115  Q
    ||||| || |||||||||| | || ||||| ||  |||||||||||||||| | ||||||| ||||| ||| ||||||||||||| ||||| ||| ||||    
T  2260079 ttagtgctggtttggtttatcggtggtttctagagaattacggtggatttttatgttttcataaaagtttgtttttgtagcttcaagattttcacgtcca 2260178  T
Q  116 acttgacttgggacgtgatatttgc 140  Q
    ||||  || || ||||||| |||||    
T  2260179 acttacctcggaacgtgatctttgc 2260203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 241 - 321
Target Start/End: Complemental strand, 45427845 - 45427765
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||| |||||||| ||||| |||  |||||||||  |||| |||||||| |||||| ||| |||||||    
T  45427845 ggaaaatgttacatgaataccttttaatcatacaccctattgtacactccatgcattagggacattttggtaatttcatct 45427765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 241 - 321
Target Start/End: Complemental strand, 50448360 - 50448280
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||||  ||||||  || ||  |||||||||||| ||||||||||||||||||  ||| |||||||    
T  50448360 ggaaaatgttacatgaacactctttatttctacactccattgtacaccttatgtattagggatatttttgtaagttcatct 50448280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 321
Target Start/End: Complemental strand, 2497660 - 2497582
Alignment:
Q  243 aaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    |||||||||||| |||||| |||||||||| |   ||||||||||| ||| ||||| |||||||||| ||| |||||||    
T  2497660 aaaatgttacataaacaccatttattcatacattccattgtacaccccatatattaaggatattttggtaagttcatct 2497582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 321
Target Start/End: Original strand, 7447828 - 7447905
Alignment:
Q  243 aaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||| | ||||||| || | | ||||||||||| |||||||||  ||||||||||||| |||||||    
T  7447828 aaaatgttacatgaacatcctttattcctacatcccattgtacacc-catgtattacagatattttgataagttcatct 7447905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 241 - 298
Target Start/End: Original strand, 14427347 - 14427404
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtatta 298  Q
    ||||||||||||||||||||| |||| ||||| |||  ||||||||||||||| ||||    
T  14427347 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacacctcatgcatta 14427404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 321
Target Start/End: Complemental strand, 38113295 - 38113215
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||| ||||||||| |||| ||||| |||  |||||||||| |||| ||||  || |||||| |||||||||||    
T  38113295 ggaaaatgttatatgaacaccctttaatcatacaccctattgtacaccccatgcattaatgacattttggtaaattcatct 38113215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 41065153 - 41065233
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||||| |||| ||||| |||   ||||||||| |||| |||||||  |||||| ||| |||||||    
T  41065153 ggaaaatgttacatgaacaccctttaatcatacaccctgttgtacaccccatgcattaggggcattttggtaatttcatct 41065233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 321
Target Start/End: Complemental strand, 45639832 - 45639752
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||||  |||| ||||| | |  |||||||||| |||  |||| |||||||||| |||||||||||    
T  45639832 ggaaaatgttacatgaacactctttaatcatacatcctattgtacaccccatacattaaggatattttggtaaattcatct 45639752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 141
Target Start/End: Complemental strand, 17302407 - 17302328
Alignment:
Q  63 attttcacgttttcacaaaagcttg-ttttgtagcttcaggatttccacatccaacttgacttgggacgtgatatttgca 141  Q
    |||||||||||| |||||||||||| ||||||||||| || |||||||| || | |||| |  |||| ||||||||||||    
T  17302407 attttcacgtttacacaaaagcttgcttttgtagctttagaatttccacgtcaagcttgccccgggatgtgatatttgca 17302328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 45705825 - 45705905
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||| ||||||||| |||| ||||| |    |||||||||  |||| |||| ||| ||||||||||||||||||    
T  45705825 ggaaaatgttatatgaacaccctttaatcatacattctattgtacactccatgcattatggacattttgataaattcatct 45705905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 2e-21; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 29705362 - 29705442
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||||| ||||||  || ||| ||||||||||| |||||||||||||||||||||||| |||||||    
T  29705362 ggaaaatgttacatgaacaccctttatttctacaccccattgtacaccccatgtattagggatattttgataagttcatct 29705442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 243 - 321
Target Start/End: Original strand, 42295197 - 42295275
Alignment:
Q  243 aaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||| ||||||| || ||||||||||||||  |||||||||||||||||||| ||| |||||||    
T  42295197 aaaatgttacatgaacaccctttattcctacacctcattgtacactccatgtattagggatattttggtaagttcatct 42295275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 1375542 - 1375622
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||| |||||||||||||||||||||||| |||  |||||||||| ||| |||||||||||||||| |||||| ||||    
T  1375542 ggaaaattttacatgaacaccttttattcatacacccaattgtacaccccatatattagggatattttggtaaatttatct 1375622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 243 - 321
Target Start/End: Original strand, 20148762 - 20148840
Alignment:
Q  243 aaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    |||||||||||| |||||| |||||||||| | | ||||||||||||||| |||||||||||||||| ||| |||||||    
T  20148762 aaaatgttacataaacaccctttattcatacatcccattgtacacctcatatattagggatattttggtaagttcatct 20148840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 243 - 321
Target Start/End: Complemental strand, 29801048 - 29800970
Alignment:
Q  243 aaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    |||||||||||| |||||| |||||||||| | | ||||||||||| |||||||||||||||||||| ||| |||||||    
T  29801048 aaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaagttcatct 29800970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 243 - 321
Target Start/End: Complemental strand, 30912660 - 30912582
Alignment:
Q  243 aaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||| ||||||| || ||| |||||||||| ||||||||||||| ||||||| ||| |||||||    
T  30912660 aaaatgttacatgaacaccctttattcctacaccccattgtacacttcatgtattaggggtattttggtaagttcatct 30912582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 5754903 - 5754983
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||||||||||||| || | | ||||||||| | ||| |||||||||||||||| ||| |||||||    
T  5754903 ggaaaatgttacatgaacaccttttattcctacatcccattgtacatcccatatattagggatattttggtaagttcatct 5754983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 11582766 - 11582846
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||||| ||||||| || | | |||||||||||  ||||||||||||||||||| ||| |||||||    
T  11582766 ggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatct 11582846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 321
Target Start/End: Complemental strand, 36743583 - 36743503
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||||| ||||||| || | | |||||||||||  ||||||||||||||||||| ||| |||||||    
T  36743583 ggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatct 36743503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 243 - 321
Target Start/End: Original strand, 42699259 - 42699337
Alignment:
Q  243 aaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||| ||||||| || ||| |||||||||||| |||||||| |||||||||  ||| |||||||    
T  42699259 aaaatgttacatgaacaccctttattcctacaccccattgtacaccttatgtattatggatatttttgtaagttcatct 42699337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 241 - 321
Target Start/End: Complemental strand, 2166063 - 2165983
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||| ||||||||||||| ||||||| || ||| ||||||| ||| |||||||||| ||||||||| ||| |||||||    
T  2166063 ggaaaatattacatgaacaccatttattcctacaccccattgtataccccatgtattagagatattttggtaagttcatct 2165983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 2546996 - 2547076
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||||  ||||||  || ||  |||||||||||||||||||||||||||||||  ||| |||||||    
T  2546996 ggaaaatgttacatgaacactctttatttctacactccattgtacacctcatgtattagggatattttagtaagttcatct 2547076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 241 - 321
Target Start/End: Complemental strand, 30660842 - 30660762
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||||| ||||||  || | | |||||||||||  ||||||||||||||||||| ||| |||||||    
T  30660842 ggaaaatgttacatgaacaccctttatttctacatcccattgtacaccctatgtattagggatattttggtaagttcatct 30660762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 35181516 - 35181596
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||||| |||| ||||| |||  |||||||||| |||| |||||||| |||||| ||| |||||||    
T  35181516 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatct 35181596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 241 - 321
Target Start/End: Complemental strand, 42197535 - 42197455
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||||| ||||||| || ||| ||||| ||||   ||||||||||||||||||| ||| |||||||    
T  42197535 ggaaaatgttacatgaacaccatttattcctacaccccattgcacacactatgtattagggatattttggtaagttcatct 42197455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 243 - 321
Target Start/End: Original strand, 26125637 - 26125715
Alignment:
Q  243 aaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    |||||||||||| |||||| |||||||||| |   |||||||||||  ||||||||||||||||||| ||| |||||||    
T  26125637 aaaatgttacataaacaccctttattcatacattccattgtacaccctatgtattagggatattttggtaagttcatct 26125715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 241 - 321
Target Start/End: Complemental strand, 40528735 - 40528654
Alignment:
Q  241 ggaaaatgttacatgaacacc-ttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    |||||||  |||||||||||| ||||||||| | ||| ||||||||||| ||| ||||||||| ||||||||||||| ||||    
T  40528735 ggaaaataatacatgaacacccttttattcacaaaccccattgtacaccccatatattagggacattttgataaatttatct 40528654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 34304788 - 34304868
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||| | |||| ||||| |||  |||||||||| |||| |||||||| |||||| ||| |||||||    
T  34304788 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatct 34304868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 321
Target Start/End: Original strand, 45397317 - 45397396
Alignment:
Q  242 gaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||| |||||||| ||||||| || ||| |||| ||||||  ||||||||||||||||||  ||| |||||||    
T  45397317 gaaaatgttacgtgaacaccctttattcctacaccccattctacaccctatgtattagggatatttttgtaagttcatct 45397396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 321
Target Start/End: Complemental strand, 33630091 - 33630013
Alignment:
Q  243 aaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||| ||||||| |||| ||||| |||||||||||||||  ||| |||||||| |||||  ||| |||||||    
T  33630091 aaaatgttacacgaacaccctttaatcatacacctcattgtacaccctatgcattagggacattttagtaatttcatct 33630013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 321
Target Start/End: Complemental strand, 16603726 - 16603646
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||| ||||| |||| ||||| |||| ||| |||||| |||| ||||  || |||||| |||||||||||    
T  16603726 ggaaaatgttacatgcacaccctttaatcatacaccttattatacaccccatgcattaaagacattttggtaaattcatct 16603646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 321
Target Start/End: Complemental strand, 18066818 - 18066738
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||||| |||| ||||| |    |||||||| | |||||||||||||||||||  ||| |||||||    
T  18066818 ggaaaatgttacatgaacaccctttaatcatacattctattgtacatcccatgtattagggatattttagtaatttcatct 18066738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 321
Target Start/End: Complemental strand, 16358933 - 16358853
Alignment:
Q  242 gaaaatgttacat-gaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||| ||| ||| |||| ||||| |||  |||||||| | |||| |||| | ||||||||||||||||||||    
T  16358933 gaaaatgttacattgaagaccctttaatcatacaccctattgtacatcccatgcattaagaatattttgataaattcatct 16358853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 31384672 - 31384744
Alignment:
Q  249 ttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||| ||||||| || |    |||||||||| ||||||||||| |||||||| ||| |||||||    
T  31384672 ttacatgaacaccctttattcttacattctattgtacaccccatgtattaggaatattttggtaagttcatct 31384744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 2e-21; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 241 - 321
Target Start/End: Complemental strand, 41334763 - 41334683
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||||| |||||||||| |||||||| ||||||  ||||||||||||||||||| ||| |||||||    
T  41334763 ggaaaatgttacatgaacaccctttattcatacacctcattatacaccctatgtattagggatattttggtaagttcatct 41334683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 7617133 - 7617213
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||||| |||||||||| ||  |||| |||||| |||||||||||||||||||| ||| |||||||    
T  7617133 ggaaaatgttacatgaacaccctttattcatacactccattatacaccccatgtattagggatattttggtaagttcatct 7617213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 241 - 321
Target Start/End: Complemental strand, 32473494 - 32473414
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||||| |||| ||||| |||| |||||||||| |||| ||||||||||||||| ||| |||||||    
T  32473494 ggaaaatgttacatgaacaccctttaatcatacaccttattgtacaccacatgcattagggatattttggtaatttcatct 32473414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 243 - 321
Target Start/End: Original strand, 5256997 - 5257075
Alignment:
Q  243 aaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    |||||||||||| |||||| |||||||||| | | ||||||||||| |||||||||||||||||||| ||| |||||||    
T  5256997 aaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaatttcatct 5257075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 321
Target Start/End: Complemental strand, 2614749 - 2614669
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||||| ||||||| || | | |||||||||||  ||||||||||||||||||| ||| |||||||    
T  2614749 ggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatct 2614669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 22512305 - 22512385
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||||| ||||||| || ||  ||||||||||  |||||||||||||||||||| ||| |||||||    
T  22512305 ggaaaatgttacatgaacaccctttattcctacactccattgtacactccatgtattagggatattttggtaagttcatct 22512385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 241 - 319
Target Start/End: Original strand, 38470579 - 38470657
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcat 319  Q
    |||||||||||||| |||||| |||||||||| |   ||||||||||| ||||||||| |||||||||| |||||||||    
T  38470579 ggaaaatgttacataaacaccctttattcatacattccattgtacaccccatgtattaaggatattttggtaaattcat 38470657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 18033982 - 18034062
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||||| ||||||| || ||  |||||||||||  ||||||||||||||||||  ||| |||||||    
T  18033982 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccctatgtattagggatatttttgtaagttcatct 18034062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 241 - 309
Target Start/End: Complemental strand, 33855143 - 33855075
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttg 309  Q
    ||||||||||||||||||||| ||||||| || ||| ||||||||||| ||||||||||| | ||||||    
T  33855143 ggaaaatgttacatgaacaccctttattcctacaccccattgtacaccccatgtattaggaacattttg 33855075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 17208074 - 17208154
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    |||||||||||| |||||||| |||| ||||| || | |||||||||| |||| |||| ||| |||||| |||||||||||    
T  17208074 ggaaaatgttacgtgaacaccctttaatcatacactttattgtacaccccatgcattaaggacattttggtaaattcatct 17208154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 243 - 299
Target Start/End: Complemental strand, 25915085 - 25915029
Alignment:
Q  243 aaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattag 299  Q
    ||||||||||||||||||| ||||||| || |||||||||||||||  |||||||||    
T  25915085 aaaatgttacatgaacaccctttattcctacacctcattgtacacccaatgtattag 25915029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 33801469 - 33801549
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||| | ||||||  || ||| ||||||||||  |||||||||||||||||||  ||| |||||||    
T  33801469 ggaaaatgttacatgaacatcctttatttctacaccccattgtacactccatgtattagggatattttagtaagttcatct 33801549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 249 - 321
Target Start/End: Complemental strand, 39122524 - 39122453
Alignment:
Q  249 ttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    |||||||||||||||||||||||| | || |||  ||||| ||||||||||| |||||||| |||||||||||    
T  39122524 ttacatgaacaccttttattcatacatctaattagacacc-catgtattaggaatattttggtaaattcatct 39122453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 62 - 138
Target Start/End: Complemental strand, 11429888 - 11429808
Alignment:
Q  62 gattttcacgttttcacaaaagcttg-----ttttgtagcttcaggatttccacatccaacttgacttgggacgtgatattt 138  Q
    ||||||||||||||||||||| ||||     ||||||| |||||||||| |||| ||||||||| || ||||||||||||||    
T  11429888 gattttcacgttttcacaaaaacttgcgaacttttgtaacttcaggatt-ccacgtccaacttgcctcgggacgtgatattt 11429808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 2e-21; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 241 - 321
Target Start/End: Complemental strand, 13780835 - 13780755
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    |||||||||||||| ||||| ||||||||| | ||||||||||||||| |||  |||||||||||||||||||||||||||    
T  13780835 ggaaaatgttacatcaacacattttattcacacacctcattgtacaccccatacattagggatattttgataaattcatct 13780755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 243 - 320
Target Start/End: Original strand, 33229303 - 33229381
Alignment:
Q  243 aaaatgttacatgaacacc-ttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatc 320  Q
    |||||| |||||||||||| |||||||| || ||||||||||||||| |||||||||||||||||||| ||| ||||||    
T  33229303 aaaatgatacatgaacacccttttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatc 33229381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 1750414 - 1750494
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||||| ||||||| || ||| |||||||||||  ||||||||||||||||||  ||| |||||||    
T  1750414 ggaaaatgttacatgaacaccctttattcctacaccccattgtacaccctatgtattagggatatttttgtaagttcatct 1750494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 309
Target Start/End: Original strand, 16096747 - 16096815
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttg 309  Q
    ||||||||||||||||||||| ||||||| || ||| |||| |||||| ||||||||||||||||||||    
T  16096747 ggaaaatgttacatgaacaccctttattcctacaccccattatacaccccatgtattagggatattttg 16096815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 30838632 - 30838712
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||||| ||||||  || | || |||||||||| |||||||||||||||||||| ||| |||||||    
T  30838632 ggaaaatgttacatgaacaccctttatttctacatcttattgtacaccccatgtattagggatattttggtaagttcatct 30838712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 321
Target Start/End: Complemental strand, 43335863 - 43335783
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||| ||||||| | ||||||| || ||||||||||||| | |||||||||||||||||||| ||| |||||||    
T  43335863 ggaaaatgttatatgaacatcatttattcctacacctcattgtacatcccatgtattagggatattttggtaagttcatct 43335783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 243 - 321
Target Start/End: Complemental strand, 41282072 - 41281994
Alignment:
Q  243 aaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||| |||| ||||| |||  |||||||||| |||| |||||||| |||||||||| |||||||    
T  41282072 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttgataatttcatct 41281994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 241 - 321
Target Start/End: Complemental strand, 12302353 - 12302273
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||||| ||||||  || ||| |||||||||||  ||||||||||||||||||  ||| |||||||    
T  12302353 ggaaaatgttacatgaacaccctttatttctacaccccattgtacaccctatgtattagggatatttttgtaagttcatct 12302273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 241 - 309
Target Start/End: Complemental strand, 12415560 - 12415492
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttg 309  Q
    ||||||||||||||||||||| |||| ||||| |||| |||||||||| |||| |||||||| ||||||    
T  12415560 ggaaaatgttacatgaacaccctttaatcatacaccttattgtacaccccatgcattagggacattttg 12415492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 241 - 309
Target Start/End: Complemental strand, 12427620 - 12427552
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttg 309  Q
    ||||||||||||||||||||| |||| ||||| |||| |||||||||| |||| |||||||| ||||||    
T  12427620 ggaaaatgttacatgaacaccctttaatcatacaccttattgtacaccccatgcattagggacattttg 12427552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 16803968 - 16804048
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||||| |||| ||||| |||  |||||||| | |||| |||||||| |||||||||| |||||||    
T  16803968 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacatcccatgcattagggacattttgataatttcatct 16804048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 16843250 - 16843330
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||||| |||| ||||| |||  |||||||| | |||| |||||||| |||||||||| |||||||    
T  16843250 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacatcccatgcattagggacattttgataatttcatct 16843330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 18491705 - 18491785
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||||| |||| ||||| |||  ||||||||||||||| |||| | | |||||| |||||||||||    
T  18491705 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacacctcatgcattaagaacattttggtaaattcatct 18491785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 43114557 - 43114637
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||||| |||| ||||| |||  |||||||||| |||| |||||||| |||||| ||| |||||||    
T  43114557 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatct 43114637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 321
Target Start/End: Original strand, 19047158 - 19047237
Alignment:
Q  242 gaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    |||||||||||||||||||| ||||||| || |   |||||||||||  ||||||||||||||||||| ||| |||||||    
T  19047158 gaaaatgttacatgaacaccctttattcctacattccattgtacaccctatgtattagggatattttggtaagttcatct 19047237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 321
Target Start/End: Complemental strand, 34817875 - 34817796
Alignment:
Q  242 gaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    |||||||||||||||||||| |||||||| | ||||||||||||||| |||| | || | | |||||| |||||||||||    
T  34817875 gaaaatgttacatgaacaccctttattcacacacctcattgtacaccccatgcactacgcacattttggtaaattcatct 34817796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 243 - 321
Target Start/End: Complemental strand, 11825752 - 11825674
Alignment:
Q  243 aaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||| |||| ||||| |||  |||||||||| |||| |||||||| |||||| ||| |||||||    
T  11825752 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatct 11825674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 243 - 321
Target Start/End: Complemental strand, 43490499 - 43490421
Alignment:
Q  243 aaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||| ||||||| || | | ||||||||||   ||||||||||||||||||| ||| |||||||    
T  43490499 aaaatgttacatgaacaccctttattcctacatcccattgtacactctatgtattagggatattttggtaagttcatct 43490421  T

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Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 241 - 321
Target Start/End: Complemental strand, 4764826 - 4764746
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    |||||||||||||| |||||| ||||||| || |||  |||||||||| |||||||||   |||||||| |||||||||||    
T  4764826 ggaaaatgttacatcaacaccatttattcctacaccctattgtacaccccatgtattataaatattttggtaaattcatct 4764746  T

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Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 321
Target Start/End: Original strand, 7070418 - 7070496
Alignment:
Q  243 aaaatgttacatgaacaccttttattcatatacctcattgtacacct-catgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||| |||||||||| | | ||||||| |||| ||| |||| |||| ||||||||||||||||||    
T  7070418 aaaatgttacatgaacaccctttattcatacatcccattgta-acctccatttattggggacattttgataaattcatct 7070496  T

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Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 241 - 314
Target Start/End: Complemental strand, 36168662 - 36168589
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaa 314  Q
    ||||||| ||||||||||||| |||||||| ||||  |||||||||| | ||| | |||||| |||||||||||    
T  36168662 ggaaaatattacatgaacaccatttattcacatactccattgtacactttatgcactagggacattttgataaa 36168589  T

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Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 321
Target Start/End: Complemental strand, 966934 - 966854
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||||| |||| ||||| |||  |||||||||| |||| |||| | |  ||||| |||||||||||    
T  966934 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattaagaacgttttggtaaattcatct 966854  T

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Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 321
Target Start/End: Complemental strand, 34895841 - 34895761
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||| ||||||||||||||| |||| ||| | |||  |||||||||| |||| |||||||| || ||| |||||||||||    
T  34895841 ggaaagtgttacatgaacaccatttaatcacacaccctattgtacaccccatgcattagggacatattggtaaattcatct 34895761  T

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Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 321
Target Start/End: Complemental strand, 6518566 - 6518489
Alignment:
Q  243 aaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||| |||| ||||| ||   |||||||||| |||| |||||||| |||||| ||| |||||||    
T  6518566 aaaatgttacatgaacacc-tttaatcatacactctattgtacaccccatgcattagggacattttggtaatttcatct 6518489  T

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Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 283 - 321
Target Start/End: Complemental strand, 42849916 - 42849878
Alignment:
Q  283 tacacctcatgtattagggatattttgataaattcatct 321  Q
    |||||| |||||||||||||||||||||||| |||||||    
T  42849916 tacaccccatgtattagggatattttgataagttcatct 42849878  T

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Target: scaffold0385 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 11251 - 11331
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||| ||||||||||  |||||||||| ||| ||||||||||| ||| |||||||||||||||| ||| |||||||    
T  11251 ggaaaatgtcacatgaacacactttattcatacaccccattgtacaccccatatattagggatattttggtaagttcatct 11331  T

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Target: scaffold0038 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 321
Target Start/End: Original strand, 112656 - 112735
Alignment:
Q  242 gaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    |||||||||||||||||||| ||||||| || |   |||||||||||  ||||||||||||||||||| ||| |||||||    
T  112656 gaaaatgttacatgaacaccctttattcctacattccattgtacaccctatgtattagggatattttggtaagttcatct 112735  T

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Target: scaffold0003 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 243 - 321
Target Start/End: Complemental strand, 45817 - 45739
Alignment:
Q  243 aaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||| |||| ||||| |||  |||||||| |  |||||||| |||||||||| |||||||||||    
T  45817 aaaatgttacatgaacaccctttaatcatacaccctattgtacatcctatgtattaaggatattttggtaaattcatct 45739  T

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Target: scaffold0187 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 241 - 321
Target Start/End: Complemental strand, 14288 - 14208
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||||| ||||||  || ||| ||||||||| |  ||||||||||||||||||  ||| |||||||    
T  14288 ggaaaatgttacatgaacaccctttatttctacaccccattgtacatcctatgtattagggatatttttgtaagttcatct 14208  T

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Target: scaffold0187; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 241 - 321
Target Start/End: Complemental strand, 24616 - 24536
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||||||||||||| ||||||  || ||| ||||||||| |  ||||||||||||||||||  ||| |||||||    
T  24616 ggaaaatgttacatgaacaccctttatttctacaccccattgtacatcctatgtattagggatatttttgtaagttcatct 24536  T

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Target: scaffold0157 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 241 - 321
Target Start/End: Complemental strand, 23521 - 23441
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    ||||||||||| ||||||||| ||||||| || ||  ||||||||| | |||||||||| ||||||||| ||| |||||||    
T  23521 ggaaaatgttatatgaacaccctttattcctacactccattgtacatcccatgtattagagatattttggtaagttcatct 23441  T

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Target: scaffold0100 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 241 - 321
Target Start/End: Complemental strand, 35556 - 35476
Alignment:
Q  241 ggaaaatgttacatgaacaccttttattcatatacctcattgtacacctcatgtattagggatattttgataaattcatct 321  Q
    |||||||||||||| |||||| |||| ||||| |||  |||||||||| |||| |||||||| || ||| |||||||||||    
T  35556 ggaaaatgttacataaacaccatttaatcatacaccatattgtacaccccatgcattagggacatattggtaaattcatct 35476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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