View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1687_low_56 (Length: 263)
Name: NF1687_low_56
Description: NF1687
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1687_low_56 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 263; Significance: 1e-147; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 263; E-Value: 1e-147
Query Start/End: Original strand, 1 - 263
Target Start/End: Complemental strand, 39109995 - 39109733
Alignment:
| Q |
1 |
tcagcaagtactttgtgtatagaagttatgattcctccttcatggttattaccacttaagtttgtcatgttttcagggaaatagccccaagcaaattgaa |
100 |
Q |
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| T |
39109995 |
tcagcaagtactttgtgtatagaagttatgattcctccttcatggttattaccacttaagtttgtcatgttttcagggaaatagccccaagcaaattgaa |
39109896 |
T |
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| Q |
101 |
ctggatggagatgaaggtttcttccaatgtttggattttgtagtccactagaaatcattagaggaggtgtaagtagtgatccacatgatgaaatagttac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39109895 |
ctggatggagatgaaggtttcttccaatgtttggattttgtagtccactagaaatcattagaggaggtgtaagtagtgatccacatgatgaaatagttac |
39109796 |
T |
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| Q |
201 |
tttggattctatttggagtttctttgtaatcttactcctccaacttgttgcagcaatcactcc |
263 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39109795 |
tttggattctatttggagtttctttgtaatcttactcctccaacttgttgcagcaatcactcc |
39109733 |
T |
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