View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1687_low_63 (Length: 249)
Name: NF1687_low_63
Description: NF1687
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1687_low_63 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 11 - 249
Target Start/End: Original strand, 20106069 - 20106307
Alignment:
| Q |
11 |
atgaatagacagacctggcgaaacaagcatcgaagttgtcttcaagaagcatttgtctagaagtctcagcctgagactcgcctttcttagtaagaacaga |
110 |
Q |
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| T |
20106069 |
atgaatagacagacctggcgaaacaagcatcgaagttgtcttcgagaagcatttgtctagaagtctcagcctgagactcgcctttcttagtaagaacaga |
20106168 |
T |
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| Q |
111 |
aaaatcagaactaccttgaatcctcccttcagcattccatgtactctgtccatgtctaacaagcacaactctctttgccactttcaatggaggaaacaag |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
20106169 |
aaaatcagaactaccttgaatcctcccttcagcattccatgtactctgtccatgtctaacaagcacaactctctttgccactttcaatggaggaaacaag |
20106268 |
T |
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| Q |
211 |
actgagtttcccaataactccacattctcttctatctcc |
249 |
Q |
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||||||||||||||||||||||||||||||||||||||| |
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| T |
20106269 |
actgagtttcccaataactccacattctcttctatctcc |
20106307 |
T |
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