View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16880_high_8 (Length: 206)
Name: NF16880_high_8
Description: NF16880
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16880_high_8 |
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Alignment Details
Target: chr8 (Bit Score: 182; Significance: 1e-98; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 182; E-Value: 1e-98
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 19780873 - 19781074
Alignment:
| Q |
1 |
ccatcttctgaagcagacaccaaactcctcccttcattcaccaagaccaaagacataattgacccatcatggctttttgttttgttacccaaattaacca |
100 |
Q |
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| T |
19780873 |
ccatcttctgaagcagacaccaaattcctcccttcattcaccaaaaccaaagacataattgacccatcatggctttttgttttgttacccaaattaacca |
19780972 |
T |
|
| Q |
101 |
attcataagcttttcctttttccaacatttttctgttcccaactttcattaaccctttataaacaaacccatctgaaccaccagcatagaaacctgactc |
200 |
Q |
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||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
19780973 |
attcatacgcttttcctttttctaacatttttctattcccaactttcattaaccctttataaacaaacccatctgaaccaccagcatagaaacctgactc |
19781072 |
T |
|
| Q |
201 |
tg |
202 |
Q |
| |
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|| |
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| T |
19781073 |
tg |
19781074 |
T |
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