View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16886_low_3 (Length: 275)

Name: NF16886_low_3
Description: NF16886
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16886_low_3
NF16886_low_3
[»] chr8 (44 HSPs)
chr8 (1-273)||(21395795-21396067)
chr8 (1-273)||(21790288-21790560)
chr8 (1-275)||(21389263-21389537)
chr8 (1-167)||(21778697-21778863)
chr8 (1-172)||(31971291-31971463)
chr8 (1-172)||(16199559-16199731)
chr8 (1-172)||(45130911-45131083)
chr8 (158-271)||(17353752-17353865)
chr8 (1-170)||(21918915-21919087)
chr8 (158-275)||(19899286-19899403)
chr8 (1-172)||(20536242-20536416)
chr8 (1-172)||(18879150-18879318)
chr8 (1-172)||(28648957-28649131)
chr8 (115-275)||(16184877-16185036)
chr8 (1-172)||(22626770-22626943)
chr8 (1-172)||(18818322-18818496)
chr8 (158-275)||(19983284-19983401)
chr8 (177-275)||(19976655-19976753)
chr8 (158-275)||(21161869-21161986)
chr8 (158-275)||(24755912-24756029)
chr8 (1-155)||(16092272-16092429)
chr8 (158-275)||(21168532-21168649)
chr8 (1-172)||(22875099-22875273)
chr8 (105-271)||(23776649-23776816)
chr8 (1-172)||(7372812-7372978)
chr8 (103-172)||(25363053-25363123)
chr8 (1-172)||(21923841-21924015)
chr8 (1-80)||(17140950-17141031)
chr8 (1-83)||(6520402-6520486)
chr8 (1-172)||(6759292-6759464)
chr8 (1-39)||(5866323-5866361)
chr8 (1-84)||(21285631-21285716)
chr8 (1-39)||(21491029-21491067)
chr8 (1-39)||(23760893-23760931)
chr8 (1-39)||(38855300-38855338)
chr8 (158-243)||(377469-377554)
chr8 (1-65)||(23406413-23406479)
chr8 (40-172)||(23648628-23648761)
chr8 (158-246)||(17926547-17926635)
chr8 (1-39)||(983455-983493)
chr8 (5-84)||(20498600-20498681)
chr8 (1-39)||(26355747-26355785)
chr8 (1-80)||(14409495-14409575)
chr8 (1-80)||(16413367-16413447)
[»] scaffold0351 (1 HSPs)
scaffold0351 (1-172)||(16316-16487)
[»] scaffold0106 (2 HSPs)
scaffold0106 (1-172)||(1323-1494)
scaffold0106 (1-172)||(7300-7471)
[»] chr2 (31 HSPs)
chr2 (1-172)||(20309142-20309313)
chr2 (1-172)||(38029-38201)
chr2 (53-275)||(40622019-40622244)
chr2 (159-275)||(23038227-23038343)
chr2 (1-228)||(23103254-23103482)
chr2 (1-185)||(23285899-23286082)
chr2 (102-275)||(22740771-22740945)
chr2 (159-275)||(23019517-23019633)
chr2 (1-172)||(298727-298902)
chr2 (1-172)||(22731147-22731321)
chr2 (102-271)||(22758530-22758700)
chr2 (1-172)||(22738093-22738266)
chr2 (117-275)||(22798937-22799094)
chr2 (1-185)||(23654286-23654473)
chr2 (1-172)||(23076476-23076650)
chr2 (1-167)||(23060547-23060716)
chr2 (5-172)||(23660061-23660230)
chr2 (1-172)||(22337149-22337323)
chr2 (163-275)||(45677966-45678078)
chr2 (225-275)||(23101041-23101091)
chr2 (1-80)||(22105443-22105524)
chr2 (1-84)||(7735-7820)
chr2 (1-39)||(7679619-7679657)
chr2 (1-39)||(25175884-25175922)
chr2 (158-275)||(21918127-21918244)
chr2 (1-39)||(23071998-23072036)
chr2 (1-116)||(23708589-23708706)
chr2 (5-39)||(28406014-28406048)
chr2 (158-275)||(25963528-25963645)
chr2 (159-275)||(24673768-24673884)
chr2 (1-80)||(32214972-32215052)
[»] scaffold0021 (2 HSPs)
scaffold0021 (1-275)||(174800-175075)
scaffold0021 (59-172)||(124679-124793)
[»] chr7 (37 HSPs)
chr7 (1-172)||(27847746-27847917)
chr7 (1-172)||(40443425-40443597)
chr7 (65-275)||(17137874-17138083)
chr7 (65-275)||(12187113-12187322)
chr7 (102-275)||(18154647-18154821)
chr7 (1-172)||(12698865-12699040)
chr7 (1-172)||(9509223-9509397)
chr7 (158-275)||(9703458-9703575)
chr7 (1-172)||(16386160-16386335)
chr7 (115-275)||(24054618-24054777)
chr7 (5-185)||(26212034-26212217)
chr7 (1-172)||(10589073-10589246)
chr7 (102-275)||(19649295-19649469)
chr7 (1-172)||(18456326-18456499)
chr7 (177-275)||(11880463-11880561)
chr7 (1-155)||(38227515-38227671)
chr7 (1-155)||(3564294-3564451)
chr7 (162-275)||(12321553-12321666)
chr7 (1-84)||(48273423-48273508)
chr7 (1-84)||(2280121-2280206)
chr7 (3-86)||(16219717-16219802)
chr7 (1-80)||(13647359-13647440)
chr7 (1-39)||(67779-67817)
chr7 (1-39)||(16495436-16495474)
chr7 (1-39)||(28505347-28505385)
chr7 (1-39)||(34200820-34200858)
chr7 (1-39)||(44014212-44014250)
chr7 (1-84)||(22072947-22073033)
chr7 (1-39)||(811180-811218)
chr7 (20-85)||(2530139-2530205)
chr7 (1-39)||(12255842-12255880)
chr7 (1-43)||(12901357-12901399)
chr7 (1-39)||(18005680-18005718)
chr7 (1-39)||(47831841-47831879)
chr7 (158-275)||(14430070-14430187)
chr7 (5-84)||(16056366-16056446)
chr7 (1-80)||(24275202-24275282)
[»] scaffold0032 (1 HSPs)
scaffold0032 (1-172)||(51616-51787)
[»] chr4 (40 HSPs)
chr4 (1-172)||(17046521-17046692)
chr4 (5-172)||(14053215-14053384)
chr4 (53-275)||(15121614-15121834)
chr4 (1-185)||(12902791-12902978)
chr4 (1-185)||(7088911-7089098)
chr4 (158-275)||(13569703-13569820)
chr4 (1-172)||(44052863-44053037)
chr4 (1-172)||(22636469-22636642)
chr4 (1-172)||(23374272-23374446)
chr4 (158-275)||(23843669-23843786)
chr4 (105-275)||(15093911-15094081)
chr4 (1-172)||(16377436-16377608)
chr4 (158-275)||(44675823-44675940)
chr4 (1-172)||(16270149-16270322)
chr4 (1-148)||(7798808-7798958)
chr4 (158-275)||(12570212-12570329)
chr4 (1-172)||(14038682-14038856)
chr4 (29-172)||(16239883-16240029)
chr4 (93-172)||(3096772-3096851)
chr4 (103-168)||(17047989-17048055)
chr4 (1-86)||(52873367-52873454)
chr4 (1-83)||(12288211-12288297)
chr4 (1-172)||(7893737-7893908)
chr4 (204-275)||(15124965-15125036)
chr4 (1-84)||(13853-13938)
chr4 (1-39)||(12774041-12774079)
chr4 (1-39)||(15551851-15551889)
chr4 (1-39)||(39706337-39706375)
chr4 (20-85)||(43256161-43256227)
chr4 (1-39)||(52243245-52243283)
chr4 (2-39)||(8846391-8846428)
chr4 (158-275)||(16356764-16356881)
chr4 (159-275)||(16487889-16488005)
chr4 (1-84)||(54798756-54798841)
chr4 (159-274)||(16348477-16348592)
chr4 (1-43)||(3096327-3096368)
chr4 (5-86)||(6899929-6900011)
chr4 (1-84)||(14280347-14280431)
chr4 (1-80)||(18215325-18215405)
chr4 (1-84)||(44928926-44929011)
[»] scaffold0598 (1 HSPs)
scaffold0598 (1-172)||(965-1136)
[»] scaffold0718 (1 HSPs)
scaffold0718 (1-172)||(5044-5215)
[»] chr5 (40 HSPs)
chr5 (1-275)||(37723937-37724212)
chr5 (65-275)||(22032415-22032624)
chr5 (1-172)||(21292883-21293056)
chr5 (65-275)||(18769815-18770024)
chr5 (65-275)||(23572178-23572387)
chr5 (158-275)||(26704257-26704374)
chr5 (158-275)||(26973990-26974107)
chr5 (1-167)||(8286760-8286930)
chr5 (1-172)||(23390409-23390583)
chr5 (158-275)||(23501156-23501273)
chr5 (105-271)||(21873387-21873553)
chr5 (2-185)||(22075054-22075240)
chr5 (158-270)||(23201559-23201672)
chr5 (159-275)||(14079340-14079456)
chr5 (1-172)||(9077986-9078160)
chr5 (1-172)||(24529254-24529428)
chr5 (25-172)||(24493626-24493776)
chr5 (1-172)||(25421566-25421740)
chr5 (5-172)||(25431432-25431602)
chr5 (1-86)||(21729064-21729151)
chr5 (1-86)||(21808389-21808476)
chr5 (178-275)||(23512318-23512415)
chr5 (1-172)||(13025345-13025518)
chr5 (1-172)||(13095529-13095702)
chr5 (1-83)||(20026942-20027028)
chr5 (1-165)||(1096501-1096668)
chr5 (1-83)||(21329500-21329584)
chr5 (102-185)||(22107273-22107357)
chr5 (3-84)||(22412220-22412302)
chr5 (20-86)||(18418633-18418699)
chr5 (1-67)||(21997553-21997621)
chr5 (20-85)||(18356367-18356433)
chr5 (1-39)||(19660884-19660922)
chr5 (20-85)||(20910800-20910866)
chr5 (1-39)||(22959581-22959619)
chr5 (1-82)||(21565576-21565659)
chr5 (1-39)||(22144083-22144121)
chr5 (1-39)||(36314611-36314649)
chr5 (158-275)||(21366477-21366594)
chr5 (1-86)||(21502156-21502243)
[»] chr6 (39 HSPs)
chr6 (1-173)||(11185539-11185711)
chr6 (1-172)||(16920546-16920717)
chr6 (1-172)||(22831537-22831710)
chr6 (1-139)||(35245620-35245758)
chr6 (1-172)||(20360873-20361047)
chr6 (158-275)||(19873313-19873430)
chr6 (158-275)||(19863171-19863288)
chr6 (1-172)||(20638196-20638370)
chr6 (102-275)||(25641994-25642168)
chr6 (115-275)||(22438951-22439110)
chr6 (158-275)||(22334702-22334819)
chr6 (158-275)||(22432443-22432560)
chr6 (1-172)||(29060574-29060748)
chr6 (1-172)||(20593807-20593981)
chr6 (1-172)||(19303454-19303627)
chr6 (1-86)||(16496278-16496365)
chr6 (1-172)||(18409740-18409914)
chr6 (1-172)||(25629268-25629442)
chr6 (40-275)||(15041361-15041596)
chr6 (189-275)||(16924690-16924776)
chr6 (189-275)||(31164658-31164744)
chr6 (158-275)||(15894240-15894357)
chr6 (158-275)||(18907299-18907416)
chr6 (1-172)||(22780140-22780314)
chr6 (1-86)||(20076734-20076817)
chr6 (1-168)||(17287713-17287883)
chr6 (158-275)||(21739833-21739950)
chr6 (1-39)||(27333267-27333305)
chr6 (1-39)||(27394007-27394045)
chr6 (20-85)||(27415942-27416008)
chr6 (158-275)||(21834701-21834818)
chr6 (1-84)||(25644354-25644440)
chr6 (1-67)||(25656660-25656727)
chr6 (1-39)||(9098563-9098601)
chr6 (1-39)||(19652229-19652267)
chr6 (1-84)||(20109172-20109257)
chr6 (1-80)||(1595580-1595660)
chr6 (219-275)||(16965121-16965177)
chr6 (1-80)||(22782258-22782338)
[»] chr1 (35 HSPs)
chr1 (1-172)||(38801304-38801475)
chr1 (102-275)||(21714684-21714858)
chr1 (1-185)||(27250629-27250816)
chr1 (103-270)||(48603652-48603820)
chr1 (158-275)||(20091284-20091401)
chr1 (158-275)||(42865022-42865139)
chr1 (1-185)||(21026714-21026901)
chr1 (1-172)||(50210126-50210300)
chr1 (42-172)||(22354485-22354616)
chr1 (1-172)||(34509814-34509988)
chr1 (40-275)||(22468507-22468742)
chr1 (40-271)||(21787857-21788088)
chr1 (6-168)||(22532308-22532473)
chr1 (158-275)||(6152046-6152163)
chr1 (158-275)||(18181932-18182049)
chr1 (40-172)||(20135262-20135395)
chr1 (158-275)||(22831189-22831306)
chr1 (5-84)||(21896258-21896339)
chr1 (1-67)||(20847173-20847241)
chr1 (1-39)||(21754079-21754117)
chr1 (1-84)||(21861572-21861657)
chr1 (1-39)||(22921918-22921956)
chr1 (93-172)||(22356087-22356168)
chr1 (93-172)||(22357773-22357854)
chr1 (159-243)||(21022830-21022914)
chr1 (1-116)||(35261051-35261165)
chr1 (1-80)||(45574893-45574974)
chr1 (1-39)||(14295600-14295638)
chr1 (5-39)||(16758687-16758721)
chr1 (1-39)||(20918638-20918676)
chr1 (5-39)||(33681045-33681079)
chr1 (20-85)||(33797573-33797639)
chr1 (1-39)||(52928019-52928057)
chr1 (158-275)||(22449077-22449194)
chr1 (3-84)||(22237663-22237746)
[»] scaffold0064 (1 HSPs)
scaffold0064 (3-172)||(47031-47200)
[»] scaffold0215 (1 HSPs)
scaffold0215 (53-274)||(26911-27130)
[»] scaffold0456 (1 HSPs)
scaffold0456 (1-172)||(10339-10510)
[»] scaffold0427 (1 HSPs)
scaffold0427 (1-172)||(13531-13703)
[»] scaffold0113 (1 HSPs)
scaffold0113 (1-172)||(32101-32272)
[»] scaffold0114 (2 HSPs)
scaffold0114 (1-172)||(15378-15550)
scaffold0114 (53-223)||(7378-7546)
[»] scaffold0358 (2 HSPs)
scaffold0358 (1-172)||(4746-4919)
scaffold0358 (42-172)||(13-143)
[»] scaffold0004 (1 HSPs)
scaffold0004 (102-275)||(69930-70104)
[»] chr3 (44 HSPs)
chr3 (1-172)||(20698349-20698522)
chr3 (65-275)||(856234-856443)
chr3 (1-172)||(12399243-12399417)
chr3 (1-172)||(13442308-13442482)
chr3 (1-172)||(17487890-17488064)
chr3 (158-275)||(17524963-17525080)
chr3 (1-172)||(14972888-14973062)
chr3 (1-172)||(17499372-17499546)
chr3 (103-222)||(14179570-14179690)
chr3 (187-275)||(15877639-15877727)
chr3 (115-275)||(23408581-23408740)
chr3 (5-172)||(14576746-14576915)
chr3 (3-172)||(18438570-18438742)
chr3 (1-172)||(26686921-26687095)
chr3 (1-172)||(43840966-43841140)
chr3 (1-172)||(24153122-24153295)
chr3 (158-275)||(23077289-23077406)
chr3 (159-275)||(14878316-14878433)
chr3 (1-171)||(23083275-23083448)
chr3 (3-172)||(40213634-40213805)
chr3 (3-171)||(25476299-25476470)
chr3 (1-172)||(42386444-42386619)
chr3 (159-275)||(15060483-15060599)
chr3 (1-172)||(11424676-11424846)
chr3 (1-65)||(14572623-14572688)
chr3 (1-39)||(12174308-12174346)
chr3 (1-84)||(15470958-15471043)
chr3 (1-39)||(32307711-32307749)
chr3 (1-39)||(49668125-49668163)
chr3 (1-39)||(52523778-52523816)
chr3 (158-275)||(11862981-11863098)
chr3 (158-275)||(12496445-12496562)
chr3 (1-83)||(14234521-14234605)
chr3 (159-243)||(15051707-15051791)
chr3 (1-80)||(17672657-17672737)
chr3 (1-39)||(9512954-9512992)
chr3 (1-39)||(9520929-9520967)
chr3 (1-39)||(13210376-13210414)
chr3 (1-35)||(16097362-16097396)
chr3 (103-172)||(16796685-16796755)
chr3 (1-84)||(36166629-36166712)
chr3 (1-80)||(9707658-9707738)
chr3 (159-243)||(16909941-16910025)
chr3 (1-80)||(29172634-29172714)
[»] scaffold1124 (1 HSPs)
scaffold1124 (65-275)||(1975-2184)
[»] scaffold0210 (2 HSPs)
scaffold0210 (65-275)||(21617-21826)
scaffold0210 (65-275)||(29509-29718)
[»] scaffold0193 (1 HSPs)
scaffold0193 (1-172)||(13245-13419)
[»] scaffold0139 (1 HSPs)
scaffold0139 (102-275)||(20117-20291)
[»] scaffold0131 (1 HSPs)
scaffold0131 (102-275)||(36592-36766)
[»] scaffold0029 (1 HSPs)
scaffold0029 (65-275)||(12857-13066)
[»] scaffold1842 (1 HSPs)
scaffold1842 (1-185)||(949-1135)
[»] scaffold0403 (1 HSPs)
scaffold0403 (1-172)||(4883-5057)
[»] scaffold0101 (1 HSPs)
scaffold0101 (158-275)||(8768-8885)
[»] scaffold0011 (2 HSPs)
scaffold0011 (1-185)||(167879-168065)
scaffold0011 (1-172)||(51947-52121)
[»] scaffold0043 (1 HSPs)
scaffold0043 (158-275)||(18431-18548)
[»] scaffold0292 (2 HSPs)
scaffold0292 (3-172)||(3506-3678)
scaffold0292 (1-165)||(377-543)
[»] scaffold0261 (2 HSPs)
scaffold0261 (177-275)||(1550-1648)
scaffold0261 (1-43)||(15695-15737)
[»] scaffold0031 (2 HSPs)
scaffold0031 (177-275)||(65604-65702)
scaffold0031 (42-86)||(128827-128871)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-172)||(1885-2059)
[»] scaffold0042 (2 HSPs)
scaffold0042 (1-172)||(24214-24390)
scaffold0042 (158-275)||(34721-34838)
[»] scaffold0647 (1 HSPs)
scaffold0647 (1-167)||(6039-6211)
[»] scaffold1895 (1 HSPs)
scaffold1895 (158-275)||(1038-1155)
[»] scaffold0555 (2 HSPs)
scaffold0555 (158-275)||(773-890)
scaffold0555 (1-84)||(10543-10628)
[»] scaffold0490 (1 HSPs)
scaffold0490 (1-172)||(1986-2160)
[»] scaffold0297 (1 HSPs)
scaffold0297 (158-275)||(15480-15597)
[»] scaffold0102 (2 HSPs)
scaffold0102 (158-275)||(48271-48388)
scaffold0102 (1-39)||(19298-19336)
[»] scaffold0023 (6 HSPs)
scaffold0023 (158-275)||(38290-38407)
scaffold0023 (158-275)||(23478-23594)
scaffold0023 (1-84)||(100408-100493)
scaffold0023 (1-39)||(119909-119947)
scaffold0023 (1-39)||(101533-101571)
scaffold0023 (1-38)||(40224-40261)
[»] scaffold0309 (1 HSPs)
scaffold0309 (27-180)||(6669-6826)
[»] scaffold0141 (1 HSPs)
scaffold0141 (1-172)||(39511-39684)
[»] scaffold0049 (1 HSPs)
scaffold0049 (1-172)||(75128-75301)
[»] scaffold0174 (1 HSPs)
scaffold0174 (158-275)||(18264-18381)
[»] scaffold0149 (2 HSPs)
scaffold0149 (158-275)||(3933-4049)
scaffold0149 (158-275)||(8364-8480)
[»] scaffold0540 (1 HSPs)
scaffold0540 (1-168)||(3068-3237)
[»] scaffold0145 (2 HSPs)
scaffold0145 (1-172)||(32976-33149)
scaffold0145 (1-172)||(38795-38968)
[»] scaffold0096 (1 HSPs)
scaffold0096 (105-275)||(16160-16330)
[»] scaffold0908 (1 HSPs)
scaffold0908 (1-168)||(3103-3273)
[»] scaffold0122 (2 HSPs)
scaffold0122 (1-172)||(25978-26152)
scaffold0122 (1-84)||(44709-44794)
[»] scaffold0081 (3 HSPs)
scaffold0081 (158-275)||(14863-14980)
scaffold0081 (158-275)||(23878-23995)
scaffold0081 (158-275)||(39302-39419)
[»] scaffold0088 (1 HSPs)
scaffold0088 (3-185)||(20946-21132)
[»] scaffold0003 (2 HSPs)
scaffold0003 (1-172)||(339863-340034)
scaffold0003 (20-85)||(71353-71419)
[»] scaffold0671 (1 HSPs)
scaffold0671 (158-275)||(6294-6411)
[»] scaffold0231 (1 HSPs)
scaffold0231 (1-180)||(22917-23098)
[»] scaffold0056 (2 HSPs)
scaffold0056 (1-172)||(17128-17304)
scaffold0056 (158-275)||(13888-14005)
[»] scaffold0035 (1 HSPs)
scaffold0035 (158-275)||(46538-46655)
[»] scaffold0324 (1 HSPs)
scaffold0324 (208-275)||(15642-15709)
[»] scaffold0228 (3 HSPs)
scaffold0228 (4-172)||(4544-4715)
scaffold0228 (4-172)||(12126-12297)
scaffold0228 (4-172)||(22078-22249)
[»] scaffold0311 (1 HSPs)
scaffold0311 (158-275)||(6889-7006)
[»] scaffold0621 (2 HSPs)
scaffold0621 (1-84)||(8500-8585)
scaffold0621 (1-39)||(6569-6607)
[»] scaffold0217 (1 HSPs)
scaffold0217 (1-169)||(16516-16687)
[»] scaffold0175 (2 HSPs)
scaffold0175 (17-185)||(13141-13313)
scaffold0175 (2-44)||(34158-34200)
[»] scaffold0121 (1 HSPs)
scaffold0121 (1-172)||(8446-8616)
[»] scaffold0026 (2 HSPs)
scaffold0026 (3-172)||(25932-26103)
scaffold0026 (3-172)||(39894-40065)
[»] scaffold0198 (1 HSPs)
scaffold0198 (117-217)||(23995-24094)
[»] scaffold0046 (3 HSPs)
scaffold0046 (1-87)||(28448-28536)
scaffold0046 (1-39)||(11326-11364)
scaffold0046 (1-39)||(2031-2069)
[»] scaffold2014 (1 HSPs)
scaffold2014 (1-84)||(1066-1151)
[»] scaffold0235 (1 HSPs)
scaffold0235 (1-82)||(11447-11530)
[»] scaffold0107 (1 HSPs)
scaffold0107 (20-85)||(15417-15483)
[»] scaffold0120 (3 HSPs)
scaffold0120 (1-142)||(32901-33043)
scaffold0120 (1-142)||(45962-46104)
scaffold0120 (1-149)||(16147-16298)
[»] scaffold0111 (1 HSPs)
scaffold0111 (158-275)||(32626-32742)
[»] scaffold0130 (1 HSPs)
scaffold0130 (46-168)||(27911-28034)
[»] scaffold0484 (1 HSPs)
scaffold0484 (103-172)||(1052-1122)
[»] scaffold0327 (1 HSPs)
scaffold0327 (42-155)||(3460-3574)
[»] scaffold0207 (1 HSPs)
scaffold0207 (1-39)||(2694-2732)
[»] scaffold0080 (2 HSPs)
scaffold0080 (158-275)||(18467-18584)
scaffold0080 (1-172)||(39947-40120)
[»] scaffold0037 (2 HSPs)
scaffold0037 (158-275)||(21380-21497)
scaffold0037 (1-84)||(22672-22757)
[»] scaffold1296 (1 HSPs)
scaffold1296 (159-275)||(582-698)
[»] scaffold0413 (1 HSPs)
scaffold0413 (3-84)||(12604-12687)
[»] scaffold1765 (1 HSPs)
scaffold1765 (1-39)||(1116-1154)
[»] scaffold0628 (1 HSPs)
scaffold0628 (1-84)||(2808-2893)
[»] scaffold0357 (1 HSPs)
scaffold0357 (1-84)||(13162-13247)
[»] scaffold0333 (2 HSPs)
scaffold0333 (1-39)||(6645-6683)
scaffold0333 (1-39)||(14025-14063)
[»] scaffold0184 (1 HSPs)
scaffold0184 (1-39)||(1118-1156)
[»] scaffold0138 (1 HSPs)
scaffold0138 (8-83)||(12980-13057)
[»] scaffold0075 (1 HSPs)
scaffold0075 (1-84)||(53551-53636)
[»] scaffold0020 (1 HSPs)
scaffold0020 (1-39)||(15826-15864)
[»] scaffold0425 (1 HSPs)
scaffold0425 (158-275)||(348-465)
[»] scaffold0412 (1 HSPs)
scaffold0412 (158-275)||(6227-6344)
[»] scaffold0395 (1 HSPs)
scaffold0395 (27-167)||(881-1021)
[»] scaffold0220 (1 HSPs)
scaffold0220 (158-274)||(4745-4861)
[»] scaffold0100 (1 HSPs)
scaffold0100 (3-39)||(23932-23968)
[»] scaffold1984 (1 HSPs)
scaffold1984 (1-39)||(163-201)
[»] scaffold0556 (1 HSPs)
scaffold0556 (1-39)||(6846-6884)
[»] scaffold0530 (1 HSPs)
scaffold0530 (1-39)||(1083-1121)
[»] scaffold0278 (1 HSPs)
scaffold0278 (1-39)||(5677-5715)
[»] scaffold0243 (1 HSPs)
scaffold0243 (1-39)||(6172-6210)
[»] scaffold0218 (1 HSPs)
scaffold0218 (1-43)||(8119-8161)
[»] scaffold0078 (1 HSPs)
scaffold0078 (1-84)||(10561-10646)
[»] scaffold0074 (1 HSPs)
scaffold0074 (5-84)||(38704-38785)
[»] scaffold0028 (1 HSPs)
scaffold0028 (1-39)||(62232-62270)
[»] scaffold0010 (2 HSPs)
scaffold0010 (1-43)||(60761-60803)
scaffold0010 (5-84)||(129943-130024)
[»] scaffold0001 (1 HSPs)
scaffold0001 (1-39)||(160718-160756)
[»] scaffold0615 (1 HSPs)
scaffold0615 (182-275)||(1895-1988)
[»] scaffold0476 (1 HSPs)
scaffold0476 (1-83)||(12800-12884)
[»] scaffold0165 (2 HSPs)
scaffold0165 (131-172)||(3648-3689)
scaffold0165 (131-172)||(7712-7753)
[»] scaffold0158 (2 HSPs)
scaffold0158 (158-275)||(3030-3147)
scaffold0158 (158-275)||(6696-6813)
[»] scaffold0008 (1 HSPs)
scaffold0008 (1-38)||(14747-14784)


Alignment Details
Target: chr8 (Bit Score: 241; Significance: 1e-133; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 21396067 - 21395795
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||    
T  21396067 gcagcttagttaaataacaaacaacaacataggcagtatacaacagcatgagataattatatcaaattcaattcatcaacatcttatgtatacaaacatt 21395968  T
Q  101 cttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcatta 200  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  21395967 cttcaagtaatgcataaacattataacacttcataatcaataacaacatatcttattcagcttcacagattacaattaacttcttatataggtctcatta 21395868  T
Q  201 ttgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcacttgcactcagttctgga 273  Q
     | |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  21395867 ctacccaagggtccatctctaatcaaatcatgcgacacagatcgcattttcctcacttgcactcagttctgga 21395795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 21790560 - 21790288
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||    
T  21790560 gcagcttagttaaataacaaacaacaacataggcagtatacaacagcatgagataattatatcaaattcaattcatcaacatcttatgtatacaaacatt 21790461  T
Q  101 cttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcatta 200  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  21790460 cttcaagtaatgcataaacattataacacttcataatcaataacaacatatcttattcagcttcacagattacaattaacttcttatataggtctcatta 21790361  T
Q  201 ttgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcacttgcactcagttctgga 273  Q
     | |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  21790360 ctacccaagggtccatctctaatcaaatcatgcgacacagatcgcattttcctcacttgcactcagttctgga 21790288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 275
Target Start/End: Complemental strand, 21389537 - 21389263
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacatt 100  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  21389537 gcagcttagttaaataacaaacaacaacataggtagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgtatacaaacatt 21389438  T
Q  101 cttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcatta 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||| ||||||||||    
T  21389437 cttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacatattacaattaacttcatatattggtctcatta 21389338  T
Q  201 ttgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcacttgcactcagttctggaag 275  Q
     | |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21389337 ctacccaagggtccatctctaatcaaatcatgcgacacagatcgcattttcctcacttgcactcagttctggaag 21389263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 21778863 - 21778697
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacatt 100  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  21778863 gcagcttagttaaataacaaacaacaacataggtagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgtatacaaacatt 21778764  T
Q  101 cttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcaca 167  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21778763 cttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcaca 21778697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 31971291 - 31971463
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaaca 98  Q
    |||||||||||||||||||| || |||||||||||||||||||  || ||||||||||| ||||||| | |||||||||||||||||||| ||||||| |    
T  31971291 gcagcttagttaaataacaa-cagcaacataggcagtatacaaaacaacatgacataataatatcaattccaattcatcaacatcttatgtatacaaata 31971389  T
Q  99 ttcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| || ||||||||||||    
T  31971390 ttcttcaagtaatgcataaacattatatcacatcataatcaacaacaacatatcttatacatcttcacagatta 31971463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 16199731 - 16199559
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa-cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacat 99  Q
    ||||||||||||||||||||||| |||||||| |||||| ||| || ||||||||||| ||||||| ||||||||||| |||||||| | ||||||| ||    
T  16199731 gcagcttagttaaataacaaacagcaacatagacagtattcaaacaacatgacataataatatcaatttcaattcatctacatcttaggtatacaaatat 16199632  T
Q  100 tcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    ||||||||||||||||||||||||||  || |||||||||||||||||||||||||| |||||||||||||||    
T  16199631 tcttcaagtaatgcataaacattatattacatcataatcaacaacaacatatcttatacagcttcacagatta 16199559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 45131083 - 45130911
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa-cagcatgacataattatatcaaattcaa-ttcatcaacatcttatgcatacaaaca 98  Q
    |||||||||||||||||||| || |||||||||||||| |||| |||||||||||||| ||||||| ||||| ||||||||||||||| | ||||||  |    
T  45131083 gcagcttagttaaataacaa-cagcaacataggcagtaaacaaacagcatgacataataatatcaatttcaaattcatcaacatcttaggtatacaatta 45130985  T
Q  99 ttcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    ||||||||||||||||||||||||||| ||| ||||||||| |||||||| ||||||| |||||||||||||||    
T  45130984 ttcttcaagtaatgcataaacattatatcacatcataatcatcaacaacaaatcttatacagcttcacagatta 45130911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 158 - 271
Target Start/End: Complemental strand, 17353865 - 17353752
Alignment:
Q  158 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 257  Q
    |||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||  ||| |||||||||| |||||| | ||||||||    
T  17353865 cagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctctaatcgaattatgcgacacaaatcgcaatatcctcact 17353766  T
Q  258 tgcactcagttctg 271  Q
    ||||||||||||||    
T  17353765 tgcactcagttctg 17353752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 21919087 - 21918915
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa- 96  Q
    |||||||||||||||||||| || |||||||||||||||||||   |||||||||||||| ||||||| | ||||||| ||||||||||   || ||||     
T  21919087 gcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcaacaacatcttaaatattcaaat 21918989  T
Q  97 cattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagat 170  Q
     |||||||||||||||||||||||||||| ||| ||||||||| || ||||| ||||||  |||||||||||||    
T  21918988 aattcttcaagtaatgcataaacattatatcacatcataatcagcagcaacacatcttaaacagcttcacagat 21918915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 158 - 275
Target Start/End: Original strand, 19899286 - 19899403
Alignment:
Q  158 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 257  Q
    |||||||||||||| ||  |||||||||| ||||||| ||||| | |||||||||||||||||||| |||| |||||||||||||||||   ||||||||    
T  19899286 cagcttcacagattgcagttaacttcttaaataggtcacattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaacatcctcact 19899385  T
Q  258 tgcactcagttctggaag 275  Q
    ||||||||||||||||||    
T  19899386 tgcactcagttctggaag 19899403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 20536242 - 20536416
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 97  Q
    |||||||||||||||||||| ||  ||||||||||||||||||   |||||||||||||| ||||||| | ||||||||||||||||||   || ||||     
T  20536242 gcagcttagttaaataacaa-cagaaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaat 20536340  T
Q  98 attcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    ||||||||||||||||| | ||||||||| ||| |||||||| ||| ||||| ||||||  || ||||||||||||    
T  20536341 attcttcaagtaatgcacataacattatatcacatcataatcgacatcaacacatcttaaacaacttcacagatta 20536416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 18879318 - 18879150
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacatt 100  Q
    |||||||||||||||||||| || ||||||||||||||||||| | ||  ||||||| ||||||| | ||||||||||||||||||   || |||| |||    
T  18879318 gcagcttagttaaataacaa-cagcaacataggcagtatacaaaaaca--acataataatatcaattgcaattcatcaacatcttaaatattcaaatatt 18879222  T
Q  101 cttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    |||||||||||||  | ||||||||| ||| |||||||||||| || || |||||| ||||||||||||||||    
T  18879221 cttcaagtaatgctcataacattatatcacatcataatcaacatcagcacatctta-tcagcttcacagatta 18879150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 28649131 - 28648957
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatac---aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 97  Q
    ||||||||||||||||||||| | |||||||||||||||||   |||||||||||||||| ||||||||| ||| ||| ||||||||||   |||||  |    
T  28649131 gcagcttagttaaataacaaa-agcaacataggcagtatacgaaaacagcatgacataataatatcaaatgcaagtcaacaacatcttaattatacattc 28649033  T
Q  98 attcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    ||  |||||||||||  || ||||||||| ||| |||||||||||| ||||| ||||||  |||||||||| ||||    
T  28649032 ataattcaagtaatgtgtataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacatatta 28648957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 115 - 275
Target Start/End: Original strand, 16184877 - 16185036
Alignment:
Q  115 taaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtcc 214  Q
    ||||||||| | ||| | ||||||||||  ||||| || ||| |||||||||||||| ||  |||| ||||||||||||| ||||| | |||| ||||||    
T  16184877 taaacattaaatcacattataatcaacattaacatctcatat-cagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtcc 16184975  T
Q  215 atctctaattaaatcatgcgacacagatcgcattttcctcacttgcactcagttctggaag 275  Q
    ||||||||| |||| ||||||||||| |||||   |||| ||||||| |||||||||||||    
T  16184976 atctctaatcaaattatgcgacacaggtcgcaacatcctaacttgcattcagttctggaag 16185036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 22626770 - 22626943
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaaca 98  Q
    |||||||||||||||||||| || |||||||||||||||||||  || ||||||||||| ||||||||| ||| ||| ||||||||||   || |||  |    
T  22626770 gcagcttagttaaataacaa-cagcaacataggcagtatacaaaacaacatgacataataatatcaaatacaaatcaacaacatcttaaatattcaatta 22626868  T
Q  99 ttcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    | ||||||||||||  || ||||||||| ||| |||| |||| || ||||| ||||||  |||||||||||||||    
T  22626869 tacttcaagtaatgtgtataacattatatcacatcattatcatcatcaacacatcttaaacagcttcacagatta 22626943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 18818496 - 18818322
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 97  Q
    |||||||||||||||||||| || |||||||||||||||||||   |||||||||||||| ||||||| |  || ||| || |||||||   || |||      
T  18818496 gcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacataataatatcaattgtaagtcaacatcatcttaaatattcaatt 18818398  T
Q  98 attcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    || |||||||||||||| | ||||||||| |||  ||||||||||| ||||| ||||||  |||||||||||||||    
T  18818397 atacttcaagtaatgcacataacattatatcacaacataatcaacatcaacacatcttaaacagcttcacagatta 18818322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 158 - 275
Target Start/End: Original strand, 19983284 - 19983401
Alignment:
Q  158 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 257  Q
    |||||||||||||| ||  |||||||||| ||||||| ||||| | |||| || |||||||||||| |||| |||||||||||||||||   |||||| |    
T  19983284 cagcttcacagattgcagttaacttcttaaataggtcacattactacccagggttccatctctaatcaaattatgcgacacagatcgcaacatcctcatt 19983383  T
Q  258 tgcactcagttctggaag 275  Q
    ||||||||||| ||||||    
T  19983384 tgcactcagttttggaag 19983401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 19976655 - 19976753
Alignment:
Q  177 taacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcacttgcactcagttctggaag 275  Q
    |||||||||| ||||||| ||||| | || | || |||||||||||| |||| |||||||||||||||||   ||||||||||||||||||||||||||    
T  19976655 taacttcttaaataggtcacattactacctagggttccatctctaatcaaattatgcgacacagatcgcaacatcctcacttgcactcagttctggaag 19976753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 275
Target Start/End: Complemental strand, 21161986 - 21161869
Alignment:
Q  158 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 257  Q
    |||||||||||||| ||  ||||||||| |||||||   |||| | ||||| |||||||||||||| |||  || ||||||||||||||   ||||||||    
T  21161986 cagcttcacagattgcagttaacttcttgtataggttatattactacccaaaggtccatctctaatcaaactatacgacacagatcgcaacatcctcact 21161887  T
Q  258 tgcactcagttctggaag 275  Q
    ||||||||||||||||||    
T  21161886 tgcactcagttctggaag 21161869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 275
Target Start/End: Original strand, 24755912 - 24756029
Alignment:
Q  158 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 257  Q
    |||||||||||||| ||  |||| || |||||||||| ||||| | |||||||||||||||||||  || | ||||||||||| |||||   | ||||||    
T  24755912 cagcttcacagattgcagttaacatcctatataggtcacattactacccaagggtccatctctaaacaagttatgcgacacaggtcgcaaagttctcact 24756011  T
Q  258 tgcactcagttctggaag 275  Q
    ||||||||||||||||||    
T  24756012 tgcactcagttctggaag 24756029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 16092429 - 16092272
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 97  Q
    |||||||||||||||||||| || ||||| |||||||||||||   |||||||||||||| ||||||||| ||| ||| |||||||| |   |||||  |    
T  16092429 gcagcttagttaaataacaa-cagcaacacaggcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaaatatacattc 16092331  T
Q  98 attcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatctta 155  Q
    ||  || ||||||||| || ||||||||| ||| |||||||||||| ||||| ||||||    
T  16092330 ataatttaagtaatgcgtataacattatatcacatcataatcaacatcaacacatctta 16092272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 158 - 275
Target Start/End: Complemental strand, 21168649 - 21168532
Alignment:
Q  158 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 257  Q
    |||||||||||||| ||  ||||||||| |||||||   |||| | ||||| |||||||||||||| |||  |||||||||||||||||   ||||||||    
T  21168649 cagcttcacagattgcagttaacttcttgtataggttatattactacccaaaggtccatctctaatcaaactatgcgacacagatcgcaacatcctcact 21168550  T
Q  258 tgcactcagttctggaag 275  Q
    ||||||||| || |||||    
T  21168549 tgcactcagatcaggaag 21168532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 22875099 - 22875273
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaaca 98  Q
    |||||||||||||||| ||  || ||||| |||||||||||||  || ||||||||||| ||||||||| ||| ||| |||||||| |   |||||  ||    
T  22875099 gcagcttagttaaatagcag-cagcaacacaggcagtatacaaaacaacatgacataataatatcaaatgcaagtcaacaacatctcaaatatacattca 22875197  T
Q  99 ttcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatctt-attcagcttcacagatta 172  Q
    |  |||||||||||| || ||||||||| ||| |||||||||||| ||||| ||||| |  |||||||||||||||    
T  22875198 taattcaagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaaacagcttcacagatta 22875273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 105 - 271
Target Start/End: Complemental strand, 23776816 - 23776649
Alignment:
Q  105 aagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcattattg 203  Q
    |||||||||| | |||||||||  || ||||| |||||| |||||| || ||  |||||||||| ||| ||  |||||||||||||||||| ||||| |     
T  23776816 aagtaatgcacataacattatataacatcatattcaacatcaacatttcataa-cagcttcacaaattgcagttaacttcttatataggtcacattacta 23776718  T
Q  204 cccaagggtccatctctaattaaatcatgcgacacaga-tcgcattttcctcacttgcactcagttctg 271  Q
    || ||| ||||||||||||  |||| |||||||||||| ||||| | ||||  ||||||||||||||||    
T  23776717 cctaagtgtccatctctaaccaaattatgcgacacagattcgcaatatcctagcttgcactcagttctg 23776649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 7372812 - 7372978
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 97  Q
    |||||||||||||||||||| || |||||||||||||||||||   |||||||||||||| ||||||| | ||| ||| || |||||||   || |||      
T  7372812 gcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattcaatt 7372910  T
Q  98 attcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    || |||||||||||||       ||||| |||  ||||||||||| ||||| ||||||  |||||||||||||||    
T  7372911 atacttcaagtaatgc-------ttatatcacaacataatcaacatcaacacatcttaaacagcttcacagatta 7372978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 103 - 172
Target Start/End: Complemental strand, 25363123 - 25363053
Alignment:
Q  103 tcaagtaatgcataaa-cattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    |||||||||||||||| ||||||| ||| |||||||||||||||||| ||||||  |||||||||||||||    
T  25363123 tcaagtaatgcataaaacattataccacatcataatcaacaacaacacatcttaaacagcttcacagatta 25363053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 21924015 - 21923841
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatac---aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 97  Q
    |||||||||||||||||| |||| ||||||||||||| |||   |||| |||||||| || ||||||| | ||| ||| ||||||||||   || |||      
T  21924015 gcagcttagttaaataac-aacagcaacataggcagtctacaaaaacaacatgacatgataatatcaattgcaagtcaacaacatcttaaatattcaatt 21923917  T
Q  98 attcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    || |||||||||||||| | ||| ||||    | |||||||||||||||||| ||||||  |||||||||||||||    
T  21923916 atacttcaagtaatgcacataaccttattttgcatcataatcaacaacaacacatcttaaacagcttcacagatta 21923841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 17140950 - 17141031
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaac 80  Q
    ||||||||||||||||||||||| ||||||||||||||| |||  || ||||||||||| ||||| |||  || ||||||||    
T  17140950 gcagcttagttaaataacaaacagcaacataggcagtatgcaatccatcatgacataataatatcgaatgtaaatcatcaac 17141031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 6520402 - 6520486
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatc 83  Q
    ||||||||||||||||||||||| ||||||||||||||| |||  || ||||| ||||  ||||| ||| ||| |||||||||||    
T  6520402 gcagcttagttaaataacaaacagcaacataggcagtatgcaaatcatcatgatataacaatatcgaatgcaagtcatcaacatc 6520486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 6759292 - 6759464
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatac---aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 97  Q
    |||||||||||||||||| |||| ||||| |||||||||||   |||| ||||||||||| ||||||||| |||    ||||||||| |   |||||  |    
T  6759292 gcagcttagttaaataac-aacagcaacacaggcagtatacaaaaacaacatgacataataatatcaaatgcaa---gtcaacatctcaattatacactc 6759387  T
Q  98 attcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatctt-attcagcttcacagatta 172  Q
    ||  ||||| |||||| || ||||||||| ||| |||||||||||| ||||| ||||| |  |||||||||||||||    
T  6759388 ataattcaattaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaaacagcttcacagatta 6759464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 5866361 - 5866323
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  5866361 gcagcttagttaaataacaaacagcaacataggcagtat 5866323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 21285631 - 21285716
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat--acaacagcatgacataattatatcaaattcaattcatcaacatct 84  Q
    ||||||| ||||||||||||||| |||||||||||||||  | |||| ||||| ||||  ||||||||| ||| ||| ||||||||    
T  21285631 gcagctttgttaaataacaaacaacaacataggcagtatgcaaaacaacatgatataacaatatcaaatgcaaatcaacaacatct 21285716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 21491029 - 21491067
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  21491029 gcagcttagttaaataacaaacagcaacataggcagtat 21491067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 23760931 - 23760893
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  23760931 gcagcttagttaaataacaaacagcaacataggcagtat 23760893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 38855338 - 38855300
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  38855338 gcagcttagttaaataacaaacagcaacataggcagtat 38855300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 243
Target Start/End: Original strand, 377469 - 377554
Alignment:
Q  158 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatc 243  Q
    |||||||||||||| ||  |||| ||||||||||||| ||||| | || ||||||||||| ||||| || ||| || |||||||||    
T  377469 cagcttcacagattgcagttaacatcttatataggtcacattactacctaagggtccatccctaatcaattcaagcaacacagatc 377554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 23406413 - 23406479
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatac---aacagcatgacataattatatcaa 65  Q
    |||||||||||||||||| |||| |||||||||||||||||   |||| ||||||||||| |||||||    
T  23406413 gcagcttagttaaataac-aacagcaacataggcagtatacaaaaacaacatgacataataatatcaa 23406479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 172
Target Start/End: Original strand, 23648628 - 23648761
Alignment:
Q  40 acaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aacattataacacttcataatc 138  Q
    |||||| ||||||||||| ||||||  | |||| || ||||||||||   || |||  |  |||||||||||||| | ||||||||| ||| ||||||||    
T  23648628 acaacaacatgacataataatatcatttgcaatacaacaacatcttaaatattcaataaaacttcaagtaatgcacacaacattatatcacatcataatc 23648727  T
Q  139 aacaacaacatatcttattcagcttcacagatta 172  Q
    |||| ||||| ||||||  |||||| ||||||||    
T  23648728 aacatcaacacatcttaaacagcttaacagatta 23648761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 246
Target Start/End: Complemental strand, 17926635 - 17926547
Alignment:
Q  158 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgca 246  Q
    |||||||||||||| ||| |||| ||||| ||||||| ||||| | || ||||||||| | ||||| || | |||||| ||||||||||    
T  17926635 cagcttcacagatttcaattaacatcttaaataggtcacattactacctaagggtccaaccctaatcaatttatgcgaaacagatcgca 17926547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 983493 - 983455
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat 39  Q
    |||||||||||||||||||| || |||||||||||||||    
T  983493 gcagcttagttaaataacaatcagcaacataggcagtat 983455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 20498600 - 20498681
Alignment:
Q  5 cttagttaaataacaaacatcaacataggcagta--tacaacagcatgacataattatatcaaattcaattcatcaacatct 84  Q
    |||||||||  |||||||| ||||||||||||||  || || ||||||| ||||  ||||||||| ||| ||||||||||||    
T  20498600 cttagttaataaacaaacagcaacataggcagtatgtaaaatagcatgatataacaatatcaaatgcaagtcatcaacatct 20498681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 26355785 - 26355747
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat 39  Q
    |||||||||||||| |||||||| |||||||||||||||    
T  26355785 gcagcttagttaaacaacaaacaacaacataggcagtat 26355747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 14409575 - 14409495
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaac 80  Q
    |||||||||||||||||||| || ||||| || ||||||||||   |||||||||||||| ||||||||| ||| ||| ||||    
T  14409575 gcagcttagttaaataacaa-cagcaacacag-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaac 14409495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 16413447 - 16413367
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaac 80  Q
    |||||||||||||||||||| || ||||| || ||||||||||   |||||||||||||| ||||||||| ||| ||| ||||    
T  16413447 gcagcttagttaaataacaa-cagcaacacag-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaac 16413367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351 (Bit Score: 152; Significance: 1e-80; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 16316 - 16487
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacatt 100  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  16316 gcagcttagttaaataagaaacagcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatattatgtatacaaacatt 16415  T
Q  101 cttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  16416 cttcaagtaatgcataaacattataacacatcataatcaacaacaacatatcttattcagcttcacagatta 16487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 152; Significance: 1e-80; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 1323 - 1494
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacatt 100  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  1323 gcagcttagttaaataacaaacagcaacataggcagtgtacaacatcatgacataattatatcaaattcaattcatcaacatcttatgtatacaaacatt 1422  T
Q  101 cttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  1423 cttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcatagatta 1494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 7300 - 7471
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| |||||||||||    
T  7300 gcagcttagttaaataacaaacaacaacataggcagtatacaacaacatgaaataattatatcaaattcaattcatcaacatcttatgtatacaaacatt 7399  T
Q  101 cttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  7400 cttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcatagatta 7471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 152; Significance: 1e-80; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 20309142 - 20309313
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacatt 100  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||    
T  20309142 gcagcttagttaaataacaaatagcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgtatacaaatatt 20309241  T
Q  101 cttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  20309242 cttcaagtaatgcataaacattataacacatcataatcaacaacaacatatcttattcagcttcacagatta 20309313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 38201 - 38029
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaaca 98  Q
    |||||||||||||||||||| || |||||||||||||||||||  |||||||||||||| ||||||| ||| |||||||| ||||||||| |||||||||    
T  38201 gcagcttagttaaataacaa-cagcaacataggcagtatacaaaacagcatgacataataatatcaatttcgattcatcatcatcttatgtatacaaaca 38103  T
Q  99 ttcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||| |||||||| ||||||    
T  38102 ttcttcaagtaatgcataaacattatatcacatcataatcaacaacaacatgtcttatacagcttcagagatta 38029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 53 - 275
Target Start/End: Complemental strand, 40622244 - 40622019
Alignment:
Q  53 ataattatatcaaattcaattcatcaacatcttatgcataca-----aacattcttcaagtaatgcataaacattataacacttcataatcaacaacaac 147  Q
    ||||||||||||| |||||||||||||||||||||| |||||     || ||||||||||||||||||||||||||||| || ||||||||||||  |||    
T  40622244 ataattatatcaa-ttcaattcatcaacatcttatgtatacagtacaaatattcttcaagtaatgcataaacattataatacatcataatcaacacaaac 40622146  T
Q  148 atatcttattcagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcat 247  Q
    || || ||  |||||||||||||| ||  |||||||||||||||||||||||| | |||||||||||||||||||  |||  |||||| ||||||||||     
T  40622145 atctcataa-cagcttcacagattgcagttaacttcttatataggtctcattactacccaagggtccatctctaaacaaaatatgcgaaacagatcgcaa 40622047  T
Q  248 tttcctcacttgcactcagttctggaag 275  Q
    | ||||||||||||||||||||||||||    
T  40622046 tatcctcacttgcactcagttctggaag 40622019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 159 - 275
Target Start/End: Original strand, 23038227 - 23038343
Alignment:
Q  159 agcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcactt 258  Q
    ||||||||||||| || |||||||||||||||||||||| || | |||||||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  23038227 agcttcacagattgcagataacttcttatataggtctcaatactacccaagggtccatctctaatcaaatcatgcgacacagatcgcaatttcctcactt 23038326  T
Q  259 gcactcagttctggaag 275  Q
    |||||||||||||||||    
T  23038327 gcactcagttctggaag 23038343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 23103482 - 23103254
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa-cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacat 99  Q
    ||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |  ||| ||  |||    
T  23103482 gcagcttagttaaataa-aaacagcaacataggcagtatacaaacagcatgacatgattatatcaaattcaattcatcaacatctcaatcattcattcat 23103384  T
Q  100 tcttcaagtaatgca--taaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctca 197  Q
      ||||||| |||||  ||||||||||| ||| ||| |  |||||  ||||| || ||  |||||||||||||| ||  |||||||||||||||||||||    
T  23103383 aattcaagtcatgcaattaaacattatatcacatcaaatccaacactaacatctcata-acagcttcacagattgcagttaacttcttatataggtctca 23103285  T
Q  198 ttattgcccaagggtccatctctaattaaat 228  Q
    ||| | || ||||||||||||||||| ||||    
T  23103284 ttactaccaaagggtccatctctaatcaaat 23103254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 23285899 - 23286082
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacatt 100  Q
    |||||||||||||||||||| || ||||||||||||||||||| | || |||||||| ||||||| | ||||||||||||||||||   || ||||  ||    
T  23285899 gcagcttagttaaataacaa-cagcaacataggcagtatacaaaaaca-gacataataatatcaattgcaattcatcaacatcttaaatattcaaatgtt 23285996  T
Q  101 cttcaagtaatgcataaa-cattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttctt 185  Q
    |||||||||||||||||| ||||||| ||| |||||||||||||||||| ||||||  ||||||||||||||| || |||| ||||    
T  23285997 cttcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacagattataattaacatctt 23286082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 102 - 275
Target Start/End: Complemental strand, 22740945 - 22740771
Alignment:
Q  102 ttcaagtaatgca--taaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcatt 199  Q
    |||||||||||||  ||| ||||||| ||| ||||| ||||||  ||||| || ||  || ||||| ||||| ||  |||||||||||||||||||||||    
T  22740945 ttcaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataa-caacttcaaagattgcagttaacttcttatataggtctcatt 22740847  T
Q  200 attgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcacttgcactcagttctggaag 275  Q
    | | |||||||||||||||||||| |||| ||||||||||||||||| | ||||||||||||||||||||||||||    
T  22740846 actacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctggaag 22740771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 159 - 275
Target Start/End: Complemental strand, 23019633 - 23019517
Alignment:
Q  159 agcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcactt 258  Q
    ||||||||| ||| |||||||||||||||||||||| ||||| | |||||||||||| |||||||||||| ||||||||||||||||| | |||| ||||    
T  23019633 agcttcacaaattgcaaataacttcttatataggtcacattactacccaagggtccaactctaattaaattatgcgacacagatcgcaatatcctgactt 23019534  T
Q  259 gcactcagttctggaag 275  Q
    |||||||||||||||||    
T  23019533 gcactcagttctggaag 23019517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 298902 - 298727
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 97  Q
    ||||||||||||||||||||||| |||||||||||||||||||   ||||||||||||| |||||||| | ||||||| ||||||||||   || ||||     
T  298902 gcagcttagttaaataacaaacagcaacataggcagtatacaaaatcagcatgacataaatatatcaattgcaattcaacaacatcttaaatattcaaat 298803  T
Q  98 attcttcaagtaatgcat-aaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    | |  ||||||||||||| |||||||||| ||| ||||||| || ||||||| ||||||| |||||||||| ||||    
T  298802 aattctcaagtaatgcataaaacattatatcacatcataattaataacaacacatcttatacagcttcacatatta 298727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 22731321 - 22731147
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 97  Q
    |||||||||||||||||||| || ||||||||||||| |||||   |||||||||||||| ||||||| | |||||||||||||| |||   || ||||     
T  22731321 gcagcttagttaaataacaa-cagcaacataggcagtttacaaaaacagcatgacataataatatcaattgcaattcatcaacatattaaatattcaaat 22731223  T
Q  98 attcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    ||||||||||||||||| | ||||||||| ||| |||||||||||| ||||| ||||||  |||||||||||||||    
T  22731222 attcttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagatta 22731147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 102 - 271
Target Start/End: Complemental strand, 22758700 - 22758530
Alignment:
Q  102 ttcaagtaatgca--taaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcatt 199  Q
    |||||||||||||  ||| ||||||| ||| ||||| ||||||  ||||| || ||  |||||||| ||||| ||  ||| |||||||||||||||||||    
T  22758700 ttcaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataa-cagcttcatagattgcagttaatttcttatataggtctcatt 22758602  T
Q  200 attgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcacttgcactcagttctg 271  Q
    | | |||||||||||||||||||| |||| ||||||||||||||||| | ||||||||||||||||||||||    
T  22758601 actacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctg 22758530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 22738266 - 22738093
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 97  Q
    |||||||||||||||||||| ||| || ||||||||| |||||   |||||||||||||| ||||||| | ||||||||||||||||||   || ||||     
T  22738266 gcagcttagttaaataacaa-cattaa-ataggcagtttacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaat 22738169  T
Q  98 attcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    ||||||||||||||||| | ||||||||| ||| |||||||||||| ||||| ||||||  |||||||||||||||    
T  22738168 attcttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagatta 22738093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 117 - 275
Target Start/End: Complemental strand, 22799094 - 22798937
Alignment:
Q  117 aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccat 216  Q
    ||||||||| ||| ||||| ||||||  ||||| || ||  |||||||||| ||| ||  |||||||||||||||||| ||||| | |||| ||||||||    
T  22799094 aacattatatcacatcatattcaacattaacatttcataa-cagcttcacaaattgcagttaacttcttatataggtcacattactacccaggggtccat 22798996  T
Q  217 ctctaattaaatcatgcgacacagatcgcattttcctcacttgcactcagttctggaag 275  Q
    ||||||| |||| ||||||||||||||||| | |||| ||||||||| |||||||||||    
T  22798995 ctctaatcaaattatgcgacacagatcgcaatatcctaacttgcacttagttctggaag 22798937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 23654473 - 23654286
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 97  Q
    |||||||||||||||||||| || || ||||||||| ||||||   || ||||||||||| ||||||| | ||||||||||||||||||   || |||      
T  23654473 gcagcttagttaaataacaa-caacagcataggcagcatacaaatacatcatgacataataatatcaattgcaattcatcaacatcttaaatattcaagt 23654375  T
Q  98 attcttcaagtaatgcataaa-cattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttctt 185  Q
    |||  |||||||||||||||| ||||||| ||| ||||||| |||||||||| ||||||  ||||||||||||||| || |||| ||||    
T  23654374 attactcaagtaatgcataaaacattatatcacatcataattaacaacaacacatcttaaacagcttcacagattataattaacctctt 23654286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 23076476 - 23076650
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 97  Q
    |||||||||||||||||||| || |||||||||||||||||||   |||||||||||||| ||||||| | ||| ||| ||| ||||||   || |||      
T  23076476 gcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcaacaatatcttaaatattcaatt 23076574  T
Q  98 attcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    || |||||||||||||| | ||||||||| ||| |||||||||||| ||||| | ||||  |||||||||||||||    
T  23076575 atacttcaagtaatgcacataacattatatcacatcataatcaacatcaacacagcttaaacagcttcacagatta 23076650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 23060547 - 23060716
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 97  Q
    |||||||||||||||||||| || |||||||||||||||||||   || ||||||||||| ||||||| | ||| ||| ||||||||||   ||  ||      
T  23060547 gcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacaacatgacataataatatcaattgcaagtcaacaacatcttaaatattaaatt 23060645  T
Q  98 attcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcaca 167  Q
    || |||||||||||||| | ||||||||| ||| |||||||||||| ||||| ||||||  ||||||||||    
T  23060646 atacttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcaca 23060716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 172
Target Start/End: Original strand, 23660061 - 23660230
Alignment:
Q  5 cttagttaaataacaaacatcaacataggcagtatac--aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattct 102  Q
    |||||||||| ||||| || |||||||||||||||||  ||||| |||||||||| ||||||||| ||| ||| ||||||||||   || ||| |||       
T  23660061 cttagttaaacaacaa-cagcaacataggcagtatacgaaacaggatgacataataatatcaaatgcaaatcaacaacatcttaaatattcaatcataac 23660159  T
Q  103 tcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    ||||||||||| || ||||||||| ||| |||||||||||| ||||| ||||||  |||||| ||| ||||    
T  23660160 tcaagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaacagctttacaaatta 23660230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 22337149 - 22337323
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 97  Q
    |||||||||||||||||||| || ||||| |||| ||||| ||   |||||||||||||| ||||||||| |||  || |||||||| |   |||||  |    
T  22337149 gcagcttagttaaataacaa-cagcaacacaggctgtatataaaaacagcatgacataataatatcaaatgcaagacaacaacatctcaaatatacattc 22337247  T
Q  98 attcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    ||  |||||||||||| || ||||||||| ||| |||||||||||| ||||||||||||  || ||||||| ||||    
T  22337248 ataattcaagtaatgcgtataacattatatcacatcataatcaacatcaacatatcttaaacaacttcacaaatta 22337323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 163 - 275
Target Start/End: Complemental strand, 45678078 - 45677966
Alignment:
Q  163 tcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcacttgcac 262  Q
    ||||||||| ||| |||| || |||||||||| ||||| | || ||| ||||||| ||||| || |||||||||||||||| ||   | |||| ||||||    
T  45678078 tcacagattgcaattaacatcctatataggtcacattactacctaagagtccatccctaatcaactcatgcgacacagatcacaacattctcaattgcac 45677979  T
Q  263 tcagttctggaag 275  Q
    |||||||||||||    
T  45677978 tcagttctggaag 45677966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 225 - 275
Target Start/End: Complemental strand, 23101091 - 23101041
Alignment:
Q  225 aaatcatgcgacacagatcgcattttcctcacttgcactcagttctggaag 275  Q
    ||||||||||||| |||||||||| ||||||||||||||||||| ||||||    
T  23101091 aaatcatgcgacatagatcgcattatcctcacttgcactcagttttggaag 23101041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 22105443 - 22105524
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaac 80  Q
    |||||||||||||||||||| || ||||||||||||||| |||   |||||||||||||| ||||||||| ||| ||| ||||    
T  22105443 gcagcttagttaaataacaa-cagcaacataggcagtatgcaaaaacagcatgacataataatatcaaatgcaagtcaacaac 22105524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 7820 - 7735
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat--acaacagcatgacataattatatcaaattcaattcatcaacatct 84  Q
    |||||||||||||  |||||||| |||||||||||||||  | |||| ||||| ||||  ||||||||| ||| ||||||||||||    
T  7820 gcagcttagttaataaacaaacagcaacataggcagtatgcaaaacaacatgatataacaatatcaaatgcaagtcatcaacatct 7735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 7679619 - 7679657
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  7679619 gcagcttagttaaataacaaacagcaacataggcagtat 7679657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 25175884 - 25175922
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  25175884 gcagcttagttaaataacaaacagcaacataggcagtat 25175922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 275
Target Start/End: Complemental strand, 21918244 - 21918127
Alignment:
Q  158 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 257  Q
    |||||||||||||| ||  |||| ||||| ||||||| ||||| | || ||||||||| |  |||| || | |||||| ||||||||||   |||| |||    
T  21918244 cagcttcacagatttcagttaacatcttaaataggtcacattactacctaagggtccaaccataatcaatttatgcgaaacagatcgcaacatcctaact 21918145  T
Q  258 tgcactcagttctggaag 275  Q
    |||| |||||||||||||    
T  21918144 tgcattcagttctggaag 21918127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 23072036 - 23071998
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat 39  Q
    |||||||||||||||||| |||| |||||||||||||||    
T  23072036 gcagcttagttaaataacgaacaacaacataggcagtat 23071998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 23708706 - 23708589
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat--acaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaaca 98  Q
    ||||||||||||||||||| | | |||||||||||||||  | |||| ||||| ||||  ||||||| | ||| ||||| |||||| |  ||| |||| |    
T  23708706 gcagcttagttaaataacagatagcaacataggcagtatgcaaaacaacatgatataacaatatcaattgcaaatcatcgacatctcaaacattcaaata 23708607  T
Q  99 ttcttcaagtaatgcata 116  Q
    |  |||||||||||||||    
T  23708606 taattcaagtaatgcata 23708589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 39
Target Start/End: Original strand, 28406014 - 28406048
Alignment:
Q  5 cttagttaaataacaaacatcaacataggcagtat 39  Q
    ||||||||||||||||||| |||||||||||||||    
T  28406014 cttagttaaataacaaacagcaacataggcagtat 28406048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 275
Target Start/End: Complemental strand, 25963645 - 25963528
Alignment:
Q  158 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 257  Q
    |||||||||||||| ||| |||| ||||| ||||||| ||||| | || ||||||||| | ||||| || | ||| || ||||||||||   | || |||    
T  25963645 cagcttcacagatttcaattaacatcttaaataggtcacattactacctaagggtccaaccctaatcaacttatgagaaacagatcgcaacatactaact 25963546  T
Q  258 tgcactcagttctggaag 275  Q
    |||| ||| |||||||||    
T  25963545 tgcattcaattctggaag 25963528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 275
Target Start/End: Original strand, 24673768 - 24673884
Alignment:
Q  159 agcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcactt 258  Q
    ||||||||||||  ||| |||| || |||||||||| ||||| | |  ||| ||||| | ||||| || | |||||||||||||||||   |||| ||||    
T  24673768 agcttcacagatcgcaattaacatcctatataggtcacattactacttaagagtccaaccctaatcaatttatgcgacacagatcgcaacatcctaactt 24673867  T
Q  259 gcactcagttctggaag 275  Q
    ||| |||||| ||||||    
T  24673868 gcattcagttgtggaag 24673884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 32215052 - 32214972
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaac 80  Q
    |||||||||||||||||||| || ||||| || ||||||||||   |||||||||||||| ||||||||| ||| ||| ||||    
T  32215052 gcagcttagttaaataacaa-caacaacacag-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaac 32214972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 146; Significance: 6e-77; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 1 - 275
Target Start/End: Original strand, 174800 - 175075
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacatt 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |  ||| ||  |||     
T  174800 gcagcttagttaaataacaaacagcaacataggcagtatacaacagcatgacatgattatatcaaattcaattcaacaacatctcaatcattcattcata 174899  T
Q  101 cttcaagtaatgca--taaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcat 198  Q
     |||||||||||||  ||||||||||| ||| ||||| ||||||  ||||| || || | ||||||||||||| ||  ||||||||||||||||||||||    
T  174900 attcaagtaatgcaactaaacattatatcacgtcatattcaacactaacatctcataat-agcttcacagatttcagttaacttcttatataggtctcat 174998  T
Q  199 tattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcacttgcactcagttctggaag 275  Q
    || | || ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  174999 tactaccaaagggtccatctctaatcaaatcatgcgacacagatcgcattttcctcacttggactcggttctggaag 175075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 59 - 172
Target Start/End: Original strand, 124679 - 124793
Alignment:
Q  59 atatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttatt 157  Q
    ||||||| | |||||||||||| | |||   || |||| ||||||||||||||||||| ||||||||| ||| |||||||||||| ||||| ||||||      
T  124679 atatcaattgcaattcatcaacgttttaaatattcaaatattcttcaagtaatgcatataacattatatcacatcataatcaacatcaacacatcttaaa 124778  T
Q  158 cagcttcacagatta 172  Q
    |||||||||||||||    
T  124779 cagcttcacagatta 124793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 144; Significance: 9e-76; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 27847917 - 27847746
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacatt 100  Q
    ||||||||||||||||| ||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  27847917 gcagcttagttaaataataaacagcaacataggcagtgtacaacagtatgacataattatatcaaattcaattcatcaacatcttatgtatacaaacatt 27847818  T
Q  101 cttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  27847817 cttcaagtaatgcataaacattatcacacatcataatcaacaacaacatatcttattcagcttcacagatta 27847746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 40443425 - 40443597
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa-cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacat 99  Q
    ||||||||||||||||||||||| ||||||| |||||| |||| |||||||||||||| ||||||| |||||||||||||||||||| | ||||||| ||    
T  40443425 gcagcttagttaaataacaaacagcaacatacgcagtaaacaaacagcatgacataataatatcaatttcaattcatcaacatcttaggtatacaaatat 40443524  T
Q  100 tcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    |||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||| |||||||||||||||    
T  40443525 tcttcaagtaatgcataaacattatatcacatcataatcaacaacgacatatcttatacagcttcacagatta 40443597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 65 - 275
Target Start/End: Complemental strand, 17138083 - 17137874
Alignment:
Q  65 aattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttc 164  Q
    |||||||||||||||||||||||| ||||||  | ||||||||||||||||||||||||||| || ||||| ||||||  ||||| || || ||||||||    
T  17138083 aattcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcatattcaacacaaacatctcata-tcagcttc 17137985  T
Q  165 acagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcacttgcactc 264  Q
    ||||||| ||  |||||||||||||||||||||||| | || ||||||||||| ||||| || ||| || ||||||||| ||   | |||||||||||||    
T  17137984 acagattgcagttaacttcttatataggtctcattactacctaagggtccatccctaatcaattcaagcaacacagatcacaacattctcacttgcactc 17137885  T
Q  265 agttctggaag 275  Q
    |||||||||||    
T  17137884 agttctggaag 17137874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 65 - 275
Target Start/End: Original strand, 12187113 - 12187322
Alignment:
Q  65 aattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttc 164  Q
    |||||||||||||||||||||||| ||||||  | ||||||||||||||||||||||||||| || ||||| |||||   ||||| ||||| ||||||||    
T  12187113 aattcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcatattcaactcaaacatctctta-tcagcttc 12187211  T
Q  165 acagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcacttgcactc 264  Q
    ||||||| ||  |||||||||||||||||||||||| | || || |||||||||||||| || ||| || ||| | ||| |  | | |||||||||||||    
T  12187212 acagattgcagttaacttcttatataggtctcattactacctaatggtccatctctaatcaattcaagcaacatatatcactatattctcacttgcactc 12187311  T
Q  265 agttctggaag 275  Q
    |||||||||||    
T  12187312 agttctggaag 12187322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 102 - 275
Target Start/End: Complemental strand, 18154821 - 18154647
Alignment:
Q  102 ttcaagtaatgca--taaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcatt 199  Q
    |||||||||||||  ||||||||||| | | ||||| ||||||  ||||| || ||  |||||||||| ||| ||  |||||||||||||||||||||||    
T  18154821 ttcaagtaatgcaattaaacattatatcgcatcatattcaacattaacatctcataa-cagcttcacatattgcagttaacttcttatataggtctcatt 18154723  T
Q  200 attgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcacttgcactcagttctggaag 275  Q
    | | ||||| ||||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  18154722 actacccaatggtccatctttaatcaaatcatgcgacacagatcgcatttccctcacttgcactcagttctggaag 18154647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 12698865 - 12699040
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa----cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 96  Q
    |||||||||||||||||||| || |||||||||||||||||||    |||||||||||||| ||||||| | ||||||||||||||||||   || ||||    
T  12698865 gcagcttagttaaataacaa-cagcaacataggcagtatacaaaacacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaa 12698963  T
Q  97 cattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
     ||||||||||||||||| | ||||||||| ||| |||||||||||| ||||| ||||||  |||||||||||||||    
T  12698964 tattcttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagatta 12699040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 9509223 - 9509397
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 97  Q
    |||||||||||||||||||| ||  ||||||||||||||||||   |||||||||||||| ||||||| | ||||||||||||||||||   || ||||     
T  9509223 gcagcttagttaaataacaa-cagtaacataggcagtatacaataacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaat 9509321  T
Q  98 attcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    ||||||||||||||||| | |||| |||| ||| |||||||||||| ||||| ||||||  |||||||||||||||    
T  9509322 attcttcaagtaatgcacataacactatatcacatcataatcaacatcaacacatcttaaacagcttcacagatta 9509397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 158 - 275
Target Start/End: Original strand, 9703458 - 9703575
Alignment:
Q  158 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 257  Q
    |||||||||||||| ||  |||||||||||||||||| ||||| | |||||||||||||||||||| |||| ||||||||| ||||||| | ||||||||    
T  9703458 cagcttcacagattgcagttaacttcttatataggtcacattaatacccaagggtccatctctaatcaaattatgcgacacggatcgcaatatcctcact 9703557  T
Q  258 tgcactcagttctggaag 275  Q
    ||||||||||||||||||    
T  9703558 tgcactcagttctggaag 9703575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 16386335 - 16386160
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 97  Q
    ||||||||||||||||||||||| | |||||||||||||||||   ||||||||||||| |||||||| |  | |||||||||||||||   || |||||    
T  16386335 gcagcttagttaaataacaaacaacgacataggcagtatacaaaatcagcatgacataaatatatcaattgtatttcatcaacatcttaaatattcaaac 16386236  T
Q  98 attcttcaagtaatgcat-aaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    | |  ||||||||||||| ||||||||||  || |||||||||||||||||| ||||||  |||||||||||||||    
T  16386235 aattctcaagtaatgcataaaacattatattacatcataatcaacaacaacacatcttaaacagcttcacagatta 16386160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 115 - 275
Target Start/End: Original strand, 24054618 - 24054777
Alignment:
Q  115 taaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtcc 214  Q
    ||||||| ||| ||| ||||||||||||  ||||| || ||  |||||||||||||| ||  ||||| |||||||||||||||||| | |||||||||||    
T  24054618 taaacatcatatcacatcataatcaacactaacatctcataa-cagcttcacagattgcagttaactccttatataggtctcattactacccaagggtcc 24054716  T
Q  215 atctctaattaaatcatgcgacacagatcgcattttcctcacttgcactcagttctggaag 275  Q
    |||||||||  ||| ||||||||||||||||| | | ||||||| ||||||||||||||||    
T  24054717 atctctaatcgaattatgcgacacagatcgcaatattctcactttcactcagttctggaag 24054777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 5 - 185
Target Start/End: Original strand, 26212034 - 26212217
Alignment:
Q  5 cttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattc 101  Q
    |||||||||||||||| || |||||||||||||||||||   |||||||||||||| ||||||| | ||||||| ||||||||||   || |||| | |     
T  26212034 cttagttaaataacaa-cagcaacataggcagtatacaaaatcagcatgacataataatatcaattgcaattcaacaacatcttaaatattcaaataatt 26212132  T
Q  102 ttcaagtaatgcat-aaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttctt 185  Q
     ||||||||||||| |||||||||| ||| | |||||||||||||||| ||||||  ||||||||||||||| || |||| ||||    
T  26212133 ctcaagtaatgcataaaacattatatcacattataatcaacaacaacacatcttaaacagcttcacagattataattaacctctt 26212217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 10589073 - 10589246
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 97  Q
    |||||||||||||||||||| || ||||||| |||||||||||   || ||||||||||| ||||||| | ||||||| |||||||||     | ||||     
T  10589073 gcagcttagttaaataacaa-cagcaacatatgcagtatacaaaaacaacatgacataatcatatcaattgcaattcaacaacatcttcaatgttcaaat 10589171  T
Q  98 attcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    |||||||||| ||||||||||||||||| ||| ||||||||| |||||||| ||||||   ||||||||||||||    
T  10589172 attcttcaagcaatgcataaacattatatcacatcataatcagcaacaacacatcttaaatagcttcacagatta 10589246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 102 - 275
Target Start/End: Complemental strand, 19649469 - 19649295
Alignment:
Q  102 ttcaagtaatgca--taaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcatt 199  Q
    |||||||||||||  ||| ||||||| ||| ||||| ||||||  |||||  ||||  | |||||||||||| ||  |||||||| || ||||||||| |    
T  19649469 ttcaagtaatgcaattaatcattatatcacatcatattcaacactaacatcacttaa-ctgcttcacagattgcagttaacttctaatttaggtctcaat 19649371  T
Q  200 attgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcacttgcactcagttctggaag 275  Q
    | | |||||||||||||||||||| |||| ||||||||||||||||| | ||||||||| ||||| ||||||||||    
T  19649370 actacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttacactcggttctggaag 19649295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 18456499 - 18456326
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaaca 98  Q
    |||||||||||||||||| |  | |||||||||||||||||||  || ||||||||||| ||||||||| ||| ||| ||||||||||   || |||  |    
T  18456499 gcagcttagttaaataacgat-agcaacataggcagtatacaaaacaacatgacataataatatcaaatgcaagtcaacaacatcttaaatattcaatta 18456401  T
Q  99 ttcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    | |||||||||||||| | ||||||||| ||| |||||||||||| ||||| ||||||  |||||||||||||||    
T  18456400 tacttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagatta 18456326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 11880463 - 11880561
Alignment:
Q  177 taacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcacttgcactcagttctggaag 275  Q
    |||| ||||||||||||| ||||| | |||||||||||||||| ||| |||| |||||||||| ||||||   ||||||||||||||||||||||||||    
T  11880463 taacatcttatataggtcacattactacccaagggtccatctcaaatcaaattatgcgacacatatcgcaacatcctcacttgcactcagttctggaag 11880561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 38227515 - 38227671
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaaca 98  Q
    ||||||||||||||||||||  | |||||||||||||||||||  |||||||||||||| ||||||||| ||| ||| ||||||||||   || |||  |    
T  38227515 gcagcttagttaaataacaat-agcaacataggcagtatacaaaacagcatgacataataatatcaaatgcaagtcaacaacatcttaaatattcaatta 38227613  T
Q  99 ttcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatctta 155  Q
    | |||||| ||||| | | | ||||||| ||| || ||||||||| ||||||||||||    
T  38227614 tacttcaattaatgtacatatcattatatcacatcttaatcaacatcaacatatctta 38227671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 3564451 - 3564294
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatac---aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 97  Q
    |||||||||||||||||||| || |||||||||||||||||   |||| ||||||||||| |||||||||  || ||| |||||||| |   |||||  |    
T  3564451 gcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacaacatgacataataatatcaaatgtaagtcaacaacatctcaattatacattc 3564353  T
Q  98 attcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatctta 155  Q
    ||  |||||||||||| || ||||||| | ||| |||||||||||| ||||| ||||||    
T  3564352 ataattcaagtaatgcgtataacattagatcacatcataatcaacatcaacacatctta 3564294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 275
Target Start/End: Complemental strand, 12321666 - 12321553
Alignment:
Q  162 ttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcacttgca 261  Q
    |||||||||| ||  |||| ||||||||||||| ||||| | || ||| ||||||| ||||| || ||||||||||||||||||    | |||| |||||    
T  12321666 ttcacagattgcagttaacatcttatataggtcacattactacctaagagtccatccctaatcaattcatgcgacacagatcgctacattctcatttgca 12321567  T
Q  262 ctcagttctggaag 275  Q
    ||||||||||||||    
T  12321566 ctcagttctggaag 12321553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 48273423 - 48273508
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatct 84  Q
    |||||||||||||||||||| || ||||| |||||||||||||   |||||||||||||| ||||||||| ||| ||| ||||||||    
T  48273423 gcagcttagttaaataacaa-cagcaacacaggcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacatct 48273508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 2280206 - 2280121
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat--acaacagcatgacataattatatcaaattcaattcatcaacatct 84  Q
    |||||||||||||  |||||||| |||||||||||||||  | |||||||||| ||||| ||||||||| ||| ||| ||||||||    
T  2280206 gcagcttagttaataaacaaacaacaacataggcagtatgcaaaacagcatgatataataatatcaaatgcaaatcaacaacatct 2280121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 86
Target Start/End: Complemental strand, 16219802 - 16219717
Alignment:
Q  3 agcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatctta 86  Q
    ||||||||||||||||||||| ||||||||||||||| |||  || ||||| ||||  ||||| ||| ||| ||||||||||||||    
T  16219802 agcttagttaaataacaaacaacaacataggcagtatgcaaatcatcatgatataacaatatcgaatgcaagtcatcaacatctta 16219717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 13647359 - 13647440
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaac 80  Q
    |||||||||||||||||||| || ||||||||||||||| |||   |||||||||||||| ||||||||| ||| ||| ||||    
T  13647359 gcagcttagttaaataacaa-cagcaacataggcagtatgcaaaaacagcatgacataataatatcaaatgcaagtcaacaac 13647440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 67779 - 67817
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  67779 gcagcttagttaaataacaaacagcaacataggcagtat 67817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 16495436 - 16495474
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  16495436 gcagcttagttaaataacaaacaacaacataggcagtat 16495474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 28505385 - 28505347
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  28505385 gcagcttagttaaataacaaacagcaacataggcagtat 28505347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 34200820 - 34200858
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  34200820 gcagcttagttaaataacaaacagcaacataggcagtat 34200858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 44014212 - 44014250
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  44014212 gcagcttagttaaataacaaacaacaacataggcagtat 44014250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 22072947 - 22073033
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatct 84  Q
    ||||||||||||||||||||||| ||||||||||| ||| |||   |||||||| ||||  |||||||||  || ||| ||||||||    
T  22072947 gcagcttagttaaataacaaacaacaacataggcactatgcaaaaccagcatgatataacaatatcaaatgtaagtcaacaacatct 22073033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 811218 - 811180
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat 39  Q
    ||||||||||||||||||||| | |||||||||||||||    
T  811218 gcagcttagttaaataacaaatagcaacataggcagtat 811180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 2530205 - 2530139
Alignment:
Q  20 aacatcaacataggcagtatacaa-cagcatgacataattatatcaaattcaattcatcaacatctt 85  Q
    |||| |||||||||||  |||||| || ||||||||||| ||||||| ||||||||| |||||||||    
T  2530205 aacagcaacataggcaacatacaaacaacatgacataataatatcaatttcaattcaacaacatctt 2530139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 12255880 - 12255842
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat 39  Q
    ||||||||||||||||||||||| |||||||| ||||||    
T  12255880 gcagcttagttaaataacaaacaacaacatagtcagtat 12255842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 12901357 - 12901399
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa 43  Q
    |||||||||||||  |||||||| |||||||||||||||||||    
T  12901357 gcagcttagttaataaacaaacaacaacataggcagtatacaa 12901399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 18005680 - 18005718
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat 39  Q
    ||||||||||||||||||||||| ||||||| |||||||    
T  18005680 gcagcttagttaaataacaaacagcaacataagcagtat 18005718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 47831841 - 47831879
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat 39  Q
    ||||||||||||||||||||||| |||||||| ||||||    
T  47831841 gcagcttagttaaataacaaacaacaacatagacagtat 47831879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 275
Target Start/End: Original strand, 14430070 - 14430187
Alignment:
Q  158 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 257  Q
    |||||||||||||  ||  |||| ||||| ||||||| ||||| | || ||||||||| | ||||| || | |||||| ||||||||||   | || |||    
T  14430070 cagcttcacagatctcagttaacatcttaaataggtcacattactacctaagggtccaaccctaatcaatttatgcgaaacagatcgcaacatactaact 14430169  T
Q  258 tgcactcagttctggaag 275  Q
    |||| |||||||||||||    
T  14430170 tgcattcagttctggaag 14430187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 16056366 - 16056446
Alignment:
Q  5 cttagttaaataacaaacatcaacataggcagtatac-aacagcatgacataattatatcaaattcaattcatcaacatct 84  Q
    ||||||||||||||||||| |||||||| || ||| | |||| ||||| ||||  ||||||||| ||| ||| ||||||||    
T  16056366 cttagttaaataacaaacagcaacatagacattatgcaaacaacatgatataacaatatcaaatgcaaatcaacaacatct 16056446  T

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Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 24275202 - 24275282
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaac 80  Q
    |||||||||||||||||||| || ||||| || ||||||||||   |||||||||||||| ||||||||| ||| ||| ||||    
T  24275202 gcagcttagttaaataacaa-cagcaacacag-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaac 24275282  T

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Target: scaffold0032 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 51616 - 51787
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||||||| ||     
T  51616 gcagcttagttaaataacaaacagcaacataggcagtatacaacatcatgacataattataacaaattcaattcatcaacatcttatgtatacaaatatc 51715  T
Q  101 cttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  51716 cttcaagaaatgcataaacattataacacttcatattcaacaacaacatatcttattcagcttcacagatta 51787  T

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Target: chr4 (Bit Score: 140; Significance: 2e-73; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 17046521 - 17046692
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacatt 100  Q
    ||||||||||||||||||||||| ||||||||| |||||| |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  17046521 gcagcttagttaaataacaaacagcaacataggtagtatagaacaacatgacataattatatcaaattcaattcatcaacatcttatgtatacaaacatt 17046620  T
Q  101 cttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    |||||||||||| |||||||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  17046621 cttcaagtaatgtataaacattataacacatcttaatcaacaacaacatatcttattcagcttcacagatta 17046692  T

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Target: chr4; HSP #2
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 5 - 172
Target Start/End: Complemental strand, 14053384 - 14053215
Alignment:
Q  5 cttagttaaataacaaacatcaacataggcagtatacaa-cagcatgacataattatatcaaattcaattcatcaacat-cttatgcatacaaacattct 102  Q
    ||||||||||||||||||| || ||||| |||||||||| |||||||||||||| ||||||| |||||||||||||||| |||||||||||||| |||||    
T  14053384 cttagttaaataacaaacaacagcatagacagtatacaaacagcatgacataataatatcaatttcaattcatcaacattcttatgcatacaaatattct 14053285  T
Q  103 tcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||||| | |||||||||||||    
T  14053284 tcaagtaatgcataaacattatatcacatcataatcaacaacaacatatcttatacggcttcacagatta 14053215  T

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Target: chr4; HSP #3
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 53 - 275
Target Start/End: Complemental strand, 15121834 - 15121614
Alignment:
Q  53 ataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatc 152  Q
    ||||||||||||| |||||||||||||||||||||| ||||||  | ||||||||||||||||||||||||||| || |||||||||||   ||||| ||    
T  15121834 ataattatatcaa-ttcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcataatcaactcaaacatctc 15121736  T
Q  153 ttattcagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcc 252  Q
     || ||||| ||||||||| ||  |||||||||||||||||||||||| | || || ||||||| |||||  || | || ||||||||||||||   | |    
T  15121735 ata-tcagcctcacagattgcagttaacttcttatataggtctcattactacctaatggtccatgtctaaacaagttattcgacacagatcgcaaagttc 15121637  T
Q  253 tcacttgcactcagttctggaag 275  Q
    ||||||||||||| |||||||||    
T  15121636 tcacttgcactcaattctggaag 15121614  T

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Target: chr4; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 12902791 - 12902978
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 97  Q
    |||||||||||||||||||| || |||||||||||||||||||   |||||||||||||| ||||||| |  |||||||||||||||||   || ||||     
T  12902791 gcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacataataatatcaattgtaattcatcaacatcttaaatattcaaat 12902889  T
Q  98 attcttcaagtaatgcataaa-cattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttctt 185  Q
    ||| ||||||||||||||||| ||||||| ||| |||||||||||||||||| ||||||  ||||||||||||||| || |||| ||||    
T  12902890 attattcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacagattataattaacctctt 12902978  T

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Target: chr4; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 7088911 - 7089098
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 97  Q
    |||||||||||||||||||| || |||||||||||||||||||   |||||||||||||| ||||||| | ||||||||||||||||||   || ||||     
T  7088911 gcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttacatattcaaat 7089009  T
Q  98 attcttcaagtaatgcat-aaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttctt 185  Q
    ||| |||||||||||||| |||||||||| ||| ||||||| | |||||||| ||||||  || |||||||||||| || |||| ||||    
T  7089010 attattcaagtaatgcataaaacattatatcacatcataattagcaacaacacatcttaaacaacttcacagattataattaacctctt 7089098  T

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Target: chr4; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 158 - 275
Target Start/End: Original strand, 13569703 - 13569820
Alignment:
Q  158 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 257  Q
    |||||||||||||| ||  |||||||||||||||||| ||||| | |||||||||||||||||||| |||| ||||||||| ||||||| | ||||||||    
T  13569703 cagcttcacagattgcagttaacttcttatataggtcacattaatacccaagggtccatctctaatcaaattatgcgacacggatcgcaatatcctcact 13569802  T
Q  258 tgcactcagttctggaag 275  Q
    ||||||||||||||||||    
T  13569803 tgcactcagttctggaag 13569820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 44052863 - 44053037
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 97  Q
    |||||| ||||||||||||| ||||||||||||||||||||||   |||||||||||||| ||||||| | ||||||||||||||||||   || ||||     
T  44052863 gcagctcagttaaataacaa-catcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaat 44052961  T
Q  98 attcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    ||||||||||||||||  | ||||||||| ||| |||||||||||| || || ||||||  |||||||||||||||    
T  44052962 attcttcaagtaatgctcataacattatatcacatcataatcaacatcagcacatcttaaacagcttcacagatta 44053037  T

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Target: chr4; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 22636469 - 22636642
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 97  Q
    |||||||||||||||||||| || |||||||| |||| |||||   |||||||||||||| ||||||| | ||||||||||||||||||   || ||||     
T  22636469 gcagcttagttaaataacaa-caacaacatagacagtttacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaat 22636567  T
Q  98 attcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    ||||||||||||||||||| ||||||||| ||| |||||||| ||| ||||| ||||||  |||||||||||||||    
T  22636568 attcttcaagtaatgcatataacattatatcacatcataatcgacatcaacacatctta-acagcttcacagatta 22636642  T

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Target: chr4; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 23374446 - 23374272
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 97  Q
    |||||||||||||||||||| || |||||||||||||||||||   ||||||||||||| |||||||| | ||||||| ||||||||||   || ||||     
T  23374446 gcagcttagttaaataacaa-cagcaacataggcagtatacaaaatcagcatgacataaatatatcaattgcaattcaacaacatcttaaatattcaaat 23374348  T
Q  98 attcttcaagtaatgcat-aaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    | |  ||||||||||||| |||||||||| ||| |||||||||||||||||| ||||||   ||||||| ||||||    
T  23374347 aattctcaagtaatgcataaaacattatatcacatcataatcaacaacaacagatcttaaaaagcttcagagatta 23374272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 158 - 275
Target Start/End: Original strand, 23843669 - 23843786
Alignment:
Q  158 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 257  Q
    |||||||||||||| ||  |||| ||||||||||||| |||||   |||||||||||||||||||| |||| |||||||||||||||||   ||||||||    
T  23843669 cagcttcacagattgcagttaacatcttatataggtcacattaccacccaagggtccatctctaatcaaattatgcgacacagatcgcaacatcctcact 23843768  T
Q  258 tgcactcagttctggaag 275  Q
    ||||||||||||||||||    
T  23843769 tgcactcagttctggaag 23843786  T

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Target: chr4; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 105 - 275
Target Start/End: Original strand, 15093911 - 15094081
Alignment:
Q  105 aagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcattattg 203  Q
    |||||||||| | ||||||||| ||| ||||| ||||||  ||||| || ||  |||||||| ||||| ||  |||||||||||||||||| ||||| |     
T  15093911 aagtaatgcacataacattatatcacatcatattcaacattaacatttcataa-cagcttcagagattgcagttaacttcttatataggtcacattacta 15094009  T
Q  204 cccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcacttgcactcagttctggaag 275  Q
     ||||||||||||||||||| |||| ||||||||||||||||| | |||| |||||||||||||| ||||||    
T  15094010 accaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctaacttgcactcagttttggaag 15094081  T

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Target: chr4; HSP #12
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 16377608 - 16377436
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa-cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacat 99  Q
    |||||||||||||||||||| || ||||||||||||||||||| |||||||||||||| ||||||||| ||| ||| |||||||| |   |||||  |||    
T  16377608 gcagcttagttaaataacaa-cagcaacataggcagtatacaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaattatacattcat 16377510  T
Q  100 tcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
      |||||||||||| || ||||||||| ||| |||||||||||| ||||  ||||||  ||||| |||||||||    
T  16377509 aattcaagtaatgcgtataacattatatcacatcataatcaacatcaacgcatcttaaacagctccacagatta 16377436  T

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Target: chr4; HSP #13
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 158 - 275
Target Start/End: Original strand, 44675823 - 44675940
Alignment:
Q  158 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 257  Q
    |||||||||||||| ||  |||||||||| ||||||| ||||| | || | ||||||||||||||| |||| |||||||||||||||||   ||||||||    
T  44675823 cagcttcacagattgcagttaacttcttaaataggtcacattactacctaggggtccatctctaatcaaattatgcgacacagatcgcaacatcctcact 44675922  T
Q  258 tgcactcagttctggaag 275  Q
    ||||||||||||||||||    
T  44675923 tgcactcagttctggaag 44675940  T

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Target: chr4; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 16270322 - 16270149
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaaca 98  Q
    |||||||| |||||||||||  | |||||||||||||||||||  |||||||||||||| ||||||||| ||| | | ||||||||||   || |||  |    
T  16270322 gcagcttaattaaataacaat-agcaacataggcagtatacaaaacagcatgacataataatatcaaatgcaagttaacaacatcttaaatattcaatta 16270224  T
Q  99 ttcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    | |||||||||||||| | ||||||||| ||| |||||||||||| ||||| ||||||  |||||||||||||||    
T  16270223 tacttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagatta 16270149  T

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Target: chr4; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 7798808 - 7798958
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 97  Q
    |||||||||||||||||||| || |||||||||||||||||||   |||||||||||||| ||||||| | ||| ||||||||||||||   || |||      
T  7798808 gcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcatcaacatcttaaatattcaatt 7798906  T
Q  98 attcttcaagtaatgcata-aacattataacacttcataatcaacaacaaca 148  Q
    || |||||||||||||| | |||||| || |||  ||||||||||| |||||    
T  7798907 atacttcaagtaatgcacataacattgtatcacaacataatcaacatcaaca 7798958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 275
Target Start/End: Original strand, 12570212 - 12570329
Alignment:
Q  158 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 257  Q
    |||||||||||||| ||  |||| || |||||||||| ||||| | |||||||||||||||||||  || | ||||||||||| |||||   | ||||||    
T  12570212 cagcttcacagattgcagttaacatcctatataggtcacattactacccaagggtccatctctaaacaagttatgcgacacaggtcgcaaagttctcact 12570311  T
Q  258 tgcactcagttctggaag 275  Q
    ||||||||||||||||||    
T  12570312 tgcactcagttctggaag 12570329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 14038682 - 14038856
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 97  Q
    |||||||||||||||||||| || ||||| | |||||||||||   || |||| |||||| ||||||||| ||| ||| |||||||| |   |||||  |    
T  14038682 gcagcttagttaaataacaa-cagcaacacatgcagtatacaaaaacaacatggcataataatatcaaatgcaagtcaacaacatctcaattatacattc 14038780  T
Q  98 attcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    ||  ||||||||||||| | ||||||||| ||| |||||||||||| ||||| || |||  |||||||||||||||    
T  14038781 atatttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatgttaaacagcttcacagatta 14038856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 29 - 172
Target Start/End: Complemental strand, 16240029 - 16239883
Alignment:
Q  29 ataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aacattata 125  Q
    |||||||||||||||  |||||||||||||| ||||||||| ||| ||| ||||||||||   || |||  || ||| |||||||||| | |||||||||    
T  16240029 ataggcagtatacaaaacagcatgacataataatatcaaatgcaagtcaacaacatcttaaatattcaattatactttaagtaatgcaaataacattata 16239930  T
Q  126 acacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
     ||  |||||||||||| ||||| ||||||  ||||||| |||||||    
T  16239929 tcatatcataatcaacatcaacacatcttaaacagcttcgcagatta 16239883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 93 - 172
Target Start/End: Original strand, 3096772 - 3096851
Alignment:
Q  93 caaacattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    |||| ||||||||||||||||||||||||| || | | ||||||||| |||||||| ||||||  |||||||||| ||||    
T  3096772 caaatattcttcaagtaatgcataaacattgtatctcatcataatcagcaacaacacatcttaaacagcttcacatatta 3096851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 103 - 168
Target Start/End: Complemental strand, 17048055 - 17047989
Alignment:
Q  103 tcaagtaatgcataaa-cattataacacttcataatcaacaacaacatatcttattcagcttcacag 168  Q
    |||||||||||||||| ||||||| ||| |||||||||||||||||| ||||||  |||||||||||    
T  17048055 tcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacag 17047989  T

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Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 52873454 - 52873367
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatctta 86  Q
    |||||||||||||||||||| || |||||||||||||||||||   |||||||||||||| ||||||| | ||| ||| || |||||||    
T  52873454 gcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcaacatcatctta 52873367  T

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Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 12288297 - 12288211
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa--cag--catgacataattatatcaaattcaattcatcaacatc 83  Q
    ||||||||||||||||||||||| ||||||||||||||| |||  |||  ||||| ||||  ||||||||| ||||||| |||||||    
T  12288297 gcagcttagttaaataacaaacagcaacataggcagtatgcaaaccagttcatgatataacaatatcaaatgcaattcaacaacatc 12288211  T

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Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 7893737 - 7893908
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 97  Q
    ||||||||||||||||||||  | |||||||||||||||||||   |||||||||||||| ||||||| | ||| ||| || |||||||   || |||      
T  7893737 gcagcttagttaaataacaat-agcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattcaatt 7893835  T
Q  98 attcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    || |||||||||||||| | | ||||||  ||| |||||||   || ||||| ||||||  |||||||||||||||    
T  7893836 atacttcaagtaatgcacataccattatttcacatcataat---cagcaacacatcttaaacagcttcacagatta 7893908  T

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Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 204 - 275
Target Start/End: Complemental strand, 15125036 - 15124965
Alignment:
Q  204 cccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcacttgcactcagttctggaag 275  Q
    |||| ||||||| ||||||  |||| |||||||||| |||| | | ||||||||||||||||||||||||||    
T  15125036 cccaggggtccaactctaaacaaattatgcgacacatatcgaaatatcctcacttgcactcagttctggaag 15124965  T

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Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 13938 - 13853
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat--acaacagcatgacataattatatcaaattcaattcatcaacatct 84  Q
    |||||||||||||  |||||||| |||||||||||||||  | |||| ||||| ||||  ||||||||| ||| ||||||||||||    
T  13938 gcagcttagttaataaacaaacagcaacataggcagtatgcaaaacaacatgatataacaatatcaaatgcaagtcatcaacatct 13853  T

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Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 12774041 - 12774079
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  12774041 gcagcttagttaaataacaaacagcaacataggcagtat 12774079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 15551851 - 15551889
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  15551851 gcagcttagttaaataacaaacagcaacataggcagtat 15551889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 39706375 - 39706337
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  39706375 gcagcttagttaaataacaaacaacaacataggcagtat 39706337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 43256227 - 43256161
Alignment:
Q  20 aacatcaacataggcagtatac-aacagcatgacataattatatcaaattcaattcatcaacatctt 85  Q
    |||| |||||||||||| |||| |||| ||||||||||| ||||||| ||||||||| |||||||||    
T  43256227 aacagcaacataggcagcataccaacaacatgacataataatatcaatttcaattcaacaacatctt 43256161  T

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Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 52243283 - 52243245
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  52243283 gcagcttagttaaataacaaacagcaacataggcagtat 52243245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 8846391 - 8846428
Alignment:
Q  2 cagcttagttaaataacaaacatcaacataggcagtat 39  Q
    |||||||||||||||||||||| |||||||||||||||    
T  8846391 cagcttagttaaataacaaacagcaacataggcagtat 8846428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 275
Target Start/End: Complemental strand, 16356881 - 16356764
Alignment:
Q  158 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 257  Q
    |||||||||||||| ||  |||| ||||| ||||||| ||||| | || ||||||||| | ||||| || | |||||| ||||||||||   | || |||    
T  16356881 cagcttcacagatttcagttaacatcttaaataggtcacattactacctaagggtccaaccctaatcaacttatgcgaaacagatcgcaacatactaact 16356782  T
Q  258 tgcactcagttctggaag 275  Q
    |||| |||||||||||||    
T  16356781 tgcattcagttctggaag 16356764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 275
Target Start/End: Complemental strand, 16488005 - 16487889
Alignment:
Q  159 agcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcactt 258  Q
    ||||||||||||  ||| |||| ||||| ||||| | ||||| | || ||||||||||| | ||| || | |||||| ||||||||||   |||| ||||    
T  16488005 agcttcacagatctcaattaacatcttaaataggacacattactacctaagggtccatcccaaatcaacttatgcgaaacagatcgcaacatcctaactt 16487906  T
Q  259 gcactcagttctggaag 275  Q
    ||| |||||||||||||    
T  16487905 gcattcagttctggaag 16487889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 54798841 - 54798756
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatct 84  Q
    ||||||||||| |||||||| || ||||| | |||||||||||   |||||||||||||| ||||||||| ||| ||| ||||||||    
T  54798841 gcagcttagttgaataacaa-cagcaacacaagcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacatct 54798756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 159 - 274
Target Start/End: Complemental strand, 16348592 - 16348477
Alignment:
Q  159 agcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcactt 258  Q
    ||||||||||||| ||  |||| ||||| ||||||| ||||| | || ||||||||| | ||||| || | |||||| ||||||||||   | || ||||    
T  16348592 agcttcacagatttcagttaacatcttaaataggtcacattactacctaagggtccaaccctaatcaacttatgcgaaacagatcgcaacatactaactt 16348493  T
Q  259 gcactcagttctggaa 274  Q
    ||| ||||||||||||    
T  16348492 gcattcagttctggaa 16348477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 3096327 - 3096368
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa 43  Q
    |||||||||||||||||| |||| |||||||||||||||||||    
T  3096327 gcagcttagttaaataac-aacagcaacataggcagtatacaa 3096368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 6899929 - 6900011
Alignment:
Q  5 cttagttaaataacaaacatcaacataggcagtatac--aacagcatgacataattatatcaaattcaattcatcaacatctta 86  Q
    ||||||||||||||||  | |||||||||||||||||  |||| |||  |||||| ||||||||| ||| ||| ||||||||||    
T  6899929 cttagttaaataacaat-agcaacataggcagtatacaaaacaacatagcataataatatcaaatgcaagtcaacaacatctta 6900011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 14280347 - 14280431
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatct 84  Q
    |||||||||||||||||||| || |||||  ||||||||||||   || ||||||||||| ||||||||| ||| ||| ||||||||    
T  14280347 gcagcttagttaaataacaa-cagcaacac-ggcagtatacaaaaacaacatgacataataatatcaaatgcaagtcaacaacatct 14280431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 18215405 - 18215325
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaac 80  Q
    |||||||||||||||||||| || ||||| || ||||||||||   |||||||||||||| ||||||||| ||| ||| ||||    
T  18215405 gcagcttagttaaataacaa-cagcaacacag-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaac 18215325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 44929011 - 44928926
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatac---aacagcatgacataattatatcaaattcaattcatcaacatct 84  Q
    |||||||||||||||||| |||| ||||| | |||||||||   |||||||||||||||| || |||||| ||| |||  |||||||    
T  44929011 gcagcttagttaaataac-aacagcaacacaagcagtatacaaaaacagcatgacataataatgtcaaatgcaagtcaataacatct 44928926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 136; Significance: 5e-71; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 1136 - 965
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacatt 100  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||| |||    
T  1136 gcagcttagttaattaataaacatcaacataggcagtatacaacatcatgacataattatatcaatttcaattcatcaacatcttatgtatacaaatatt 1037  T
Q  101 cttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||    
T  1036 cttcaagtaatgcataaacattataacacatcataatcaacaacaacatattttatacagcttcacagatta 965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0718 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: scaffold0718
Description:

Target: scaffold0718; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 5215 - 5044
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacatt 100  Q
    ||||||||||||||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  5215 gcagcttagttaaataacaaacatcaacataggtattatacaacatcatgacataattatatcaaattcaattcatcaacatcttatgtatacaaacatt 5116  T
Q  101 cttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    |||||||||||| |||||||||||||||| || |||||||||||||||||| |||||||| |||||| ||||    
T  5115 cttcaagtaatgtataaacattataacacatcttaatcaacaacaacatattttattcagtttcacatatta 5044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 130; Significance: 2e-67; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 275
Target Start/End: Original strand, 37723937 - 37724212
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacatt 100  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |  ||| ||  |||     
T  37723937 gcagcttagttaaataacagacagcaacataggcagtatacaacagcatgacatgattatatcaaattaaattcatcaacatctcaatcattcattcata 37724036  T
Q  101 cttcaagtaatgca--taaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcat 198  Q
     |||||||||||||  ||||||||||| ||| ||||| ||||||  ||||| ||  |  |||||||||||||| ||  |||||||||||||||||||||     
T  37724037 attcaagtaatgcaattaaacattatatcacatcatattcaacactaacatctcaaaa-cagcttcacagattgcagttaacttcttatataggtctcaa 37724135  T
Q  199 tattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcacttgcactcagttctggaag 275  Q
    || | || ||||||||||||||||| |||| ||||||||||||||||| | ||||||||||||||||||||||||||    
T  37724136 tactaccgaagggtccatctctaatcaaattatgcgacacagatcgcaatctcctcacttgcactcagttctggaag 37724212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 65 - 275
Target Start/End: Original strand, 22032415 - 22032624
Alignment:
Q  65 aattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttc 164  Q
    |||||||||||||||||||||||| ||||||  | ||||||||||||||||||||||||||| || ||||| ||||||  ||||| || || ||||||||    
T  22032415 aattcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcatattcaacacaaacatctcgta-tcagcttc 22032513  T
Q  165 acagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcacttgcactc 264  Q
    ||||||| ||  |||||||||||||||||||||||| | || ||||||||||||||||| || ||| || ||||| ||| ||   | |||||||||||||    
T  22032514 acagattgcagttaacttcttatataggtctcattactacctaagggtccatctctaatcaattcaagcaacacatatcacaacattctcacttgcactc 22032613  T
Q  265 agttctggaag 275  Q
    |||||||||||    
T  22032614 agttctggaag 22032624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 21293056 - 21292883
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa-cagcatgacataattatatcaa-attcaa-ttcatcaacatcttatgcatacaaac 97  Q
    |||||||||||||||||||| || |||||||||||||| |||| ||| |||||||||| ||||||| |||||| ||||||||||||||| | ||||||      
T  21293056 gcagcttagttaaataacaa-cagcaacataggcagtaaacaaacagtatgacataataatatcaatattcaaattcatcaacatcttaggtatacaatt 21292958  T
Q  98 attcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    |||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||| || ||||||||||||    
T  21292957 attcttcaagtaatgcataaacattatatcacatcataatcatcaacaacatatcttatacaacttcacagatta 21292883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 65 - 275
Target Start/End: Complemental strand, 18770024 - 18769815
Alignment:
Q  65 aattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttc 164  Q
    |||||||||||||||||||||||| ||||||  | ||||||||||||||||||||||||||| || ||||| ||||||  ||||| || || ||||||||    
T  18770024 aattcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcatattcaacacaaacatctcata-tcagcttc 18769926  T
Q  165 acagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcacttgcactc 264  Q
    ||||||| ||  |||||||||||||||||||||||| | || ||||||||||| ||||| || ||| || ||||||||| |    | ||||||||| |||    
T  18769925 acagattgcagttaacttcttatataggtctcattactacctaagggtccatccctaatcaattcaagcaacacagatcactacattctcacttgcgctc 18769826  T
Q  265 agttctggaag 275  Q
    |||||||||||    
T  18769825 agttctggaag 18769815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 65 - 275
Target Start/End: Original strand, 23572178 - 23572387
Alignment:
Q  65 aattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttc 164  Q
    |||||||||||||||||||||||| ||||||  | ||||||||||||||||||||||||||| || |||||||||||   ||||| || || ||| ||||    
T  23572178 aattcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcataatcaactcaaacatctcata-tcaacttc 23572276  T
Q  165 acagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcacttgcactc 264  Q
    ||| ||| ||  |||||||||||||||||||||||| | || ||||||||||| ||||| || ||| || ||  ||||| ||   | |||||||||||||    
T  23572277 acaaattgcagttaacttcttatataggtctcattactacctaagggtccatccctaatcaattcaagcaacttagatcacaacattctcacttgcactc 23572376  T
Q  265 agttctggaag 275  Q
    |||||||||||    
T  23572377 agttctggaag 23572387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 158 - 275
Target Start/End: Original strand, 26704257 - 26704374
Alignment:
Q  158 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 257  Q
    |||||||||||||| ||  |||||||||||||| ||||||||| | |||||||||||||| ||||| ||||||||||||||||||| ||||||||| |||    
T  26704257 cagcttcacagattgcagttaacttcttatatatgtctcattactacccaagggtccatccctaatcaaatcatgcgacacagatcacattttccttact 26704356  T
Q  258 tgcactcagttctggaag 275  Q
    ||||||||||||||||||    
T  26704357 tgcactcagttctggaag 26704374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 158 - 275
Target Start/End: Original strand, 26973990 - 26974107
Alignment:
Q  158 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 257  Q
    |||||||||||||| ||  |||||||||||||| ||||||||| | |||||||||||||| ||||| ||||||||||||||||||| ||||||||| |||    
T  26973990 cagcttcacagattgcagttaacttcttatatatgtctcattactacccaagggtccatccctaatcaaatcatgcgacacagatcacattttccttact 26974089  T
Q  258 tgcactcagttctggaag 275  Q
    ||||||||||||||||||    
T  26974090 tgcactcagttctggaag 26974107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 8286930 - 8286760
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa----cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 96  Q
    |||||||||||||||||||| || |||||||||||||||||||    |||||||||||||| ||||||| | ||||||||||||||||||   |  ||||    
T  8286930 gcagcttagttaaataacaa-cagcaacataggcagtatacaaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaataatcaaa 8286832  T
Q  97 cattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcaca 167  Q
    |||||||||||||||||| | ||||||||| ||| |||||||||||| ||||| ||||||  ||||||||||    
T  8286831 cattcttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcaca 8286760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 23390583 - 23390409
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 97  Q
    |||||||||||||||||||| || |||||||| ||||||||||   || ||||||||||| ||||||| | ||||||||||||||||||   || ||||     
T  23390583 gcagcttagttaaataacaa-cagcaacatagacagtatacaaaaacaacatgacataataatatcaattgcaattcatcaacatcttaaatattcaaat 23390485  T
Q  98 attcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    ||||||||||||||||| | ||||||||| ||| |||||||||||| ||||| ||||||   ||||||||||||||    
T  23390484 attcttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaatagcttcacagatta 23390409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 158 - 275
Target Start/End: Complemental strand, 23501273 - 23501156
Alignment:
Q  158 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 257  Q
    |||||||||||||| ||| |||||||||||||||||||||||| | |||||||||||||||||||| || | || ||||||||||||||   | ||||||    
T  23501273 cagcttcacagattgcaattaacttcttatataggtctcattactacccaagggtccatctctaatcaacttatacgacacagatcgcaacattctcact 23501174  T
Q  258 tgcactcagttctggaag 275  Q
    | ||||||||||||||||    
T  23501173 ttcactcagttctggaag 23501156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 105 - 271
Target Start/End: Original strand, 21873387 - 21873553
Alignment:
Q  105 aagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcattattg 203  Q
    |||||||||| | ||||||||| ||| ||||| ||||||  ||||| || ||  |||||||||||||| ||  |||||||||||||||||| ||||| |     
T  21873387 aagtaatgcacataacattatatcacatcatattcaacattaacatttcataa-cagcttcacagattgcagttaacttcttatataggtcacattacta 21873485  T
Q  204 cccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcacttgcactcagttctg 271  Q
    ||||||||| |||||||||| |||| |||||||||||||| || | |||| |||||||||||||||||    
T  21873486 cccaagggttcatctctaatcaaattatgcgacacagatctcaatatcctaacttgcactcagttctg 21873553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 2 - 185
Target Start/End: Original strand, 22075054 - 22075240
Alignment:
Q  2 cagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaaca 98  Q
    ||||||||||||||||||| || ||||||||| |||||||||   || ||||||||||| ||||||| | ||||||| ||||||||||   || |||| |    
T  22075054 cagcttagttaaataacaa-cagcaacataggaagtatacaaaatcaacatgacataataatatcaattgcaattcaacaacatcttaaatattcaaata 22075152  T
Q  99 ttcttcaagtaatgcataaa-cattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttctt 185  Q
     |  |||||||||||||||| ||||||| ||| |||||||||||||||||| ||||||  |||||||||| |||| || |||| ||||    
T  22075153 attctcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacatattataattaacctctt 22075240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 158 - 270
Target Start/End: Original strand, 23201559 - 23201672
Alignment:
Q  158 cagcttcacagattacaaataacttcttatataggtctcattattgccc-aagggtccatctctaattaaatcatgcgacacagatcgcattttcctcac 256  Q
    |||||||||||||| ||  ||||||||| |||||||||||||| | ||| ||||||||||||||||  |||| ||||||||||||||||| | |||||||    
T  23201559 cagcttcacagattgcagttaacttcttctataggtctcattactaccccaagggtccatctctaaacaaattatgcgacacagatcgcaatatcctcac 23201658  T
Q  257 ttgcactcagttct 270  Q
    ||||||||||||||    
T  23201659 ttgcactcagttct 23201672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 159 - 275
Target Start/End: Original strand, 14079340 - 14079456
Alignment:
Q  159 agcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcactt 258  Q
    ||||||||||||| ||  |||||||||| ||||||| ||||| | |||| ||||||||||||||| |||| |||||||||||||||||   |||||||||    
T  14079340 agcttcacagattgcagttaacttcttaaataggtcacattactacccaggggtccatctctaatcaaattatgcgacacagatcgcaacatcctcactt 14079439  T
Q  259 gcactcagttctggaag 275  Q
    |||||||||||| ||||    
T  14079440 gcactcagttctagaag 14079456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 9077986 - 9078160
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatac---aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 97  Q
    |||||||||||||||||||| || |||||||||||||||||   |||||||||||||||| ||||||| | ||| ||| |||||||| |   |||||  |    
T  9077986 gcagcttagttaaataacaa-cagcaacataggcagtatacgaaaacagcatgacataataatatcaagtgcaagtcaacaacatctcaattatacattc 9078084  T
Q  98 attcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    ||   ||||||||||| || ||||||||| ||| |||||||||||| ||||| ||||||  |||||||||||||||    
T  9078085 ataactcaagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagatta 9078160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 24529254 - 24529428
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 97  Q
    |||||||||||||||||||| || |||||||||||||||||||   || ||||||||||| ||||||||| ||| ||| ||||||||||   |||||  |    
T  24529254 gcagcttagttaaataacaa-caacaacataggcagtatacaaaaacaacatgacataatgatatcaaatgcaagtcaacaacatcttaattatacattc 24529352  T
Q  98 attcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    ||   ||||||||||| || ||||||||| ||| ||||| |||||| ||||| ||||||  |||||||||||||||    
T  24529353 atatctcaagtaatgcttataacattatatcacatcatattcaacatcaacacatcttaaacagcttcacagatta 24529428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 25 - 172
Target Start/End: Original strand, 24493626 - 24493776
Alignment:
Q  25 caacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aacat 121  Q
    |||||||||||||||||||  |||||||||||||| ||||||||| ||| ||| ||||||||||   || |||  || |||||||| ||||| | |||||    
T  24493626 caacataggcagtatacaaaacagcatgacataataatatcaaatgcaagtcaacaacatcttaaatattcaattatacttcaagtgatgcacataacat 24493725  T
Q  122 tataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    |||| ||| |||||||||||| ||||||||||||   ||||||||||||||    
T  24493726 tatatcacatcataatcaacatcaacatatcttaaatagcttcacagatta 24493776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 25421566 - 25421740
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 97  Q
    |||||||||||||||||||| || |||||||||||||||||||   || ||||||||||| ||||||| | ||| ||| || |||||||   || |||      
T  25421566 gcagcttagttaaataacaa-caacaacataggcagtatacaaaaacaacatgacataataatatcaattgcaagtcaacagcatcttaaatattcaatt 25421664  T
Q  98 attcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    || |||||||||||||| | ||||||||| ||| |||||||||||| ||||  ||||||  |||||||||||||||    
T  25421665 atacttcaagtaatgcacataacattatatcacatcataatcaacatcaacgcatcttaaacagcttcacagatta 25421740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 172
Target Start/End: Original strand, 25431432 - 25431602
Alignment:
Q  5 cttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattc 101  Q
    |||||||||||||||| || |||||||||||||||||||   || ||||||||||| ||||||| | ||| ||| ||||||||||    | |||  || |    
T  25431432 cttagttaaataacaa-cagcaacataggcagtatacaaaaacaacatgacataataatatcaattgcaagtcaacaacatcttaaatgttcaattatac 25431530  T
Q  102 ttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    ||||||||||||| | ||||||||| ||| |||||||||||| ||||  ||||||  |||||||||||||||    
T  25431531 ttcaagtaatgcacataacattatatcacatcataatcaacatcaacgcatcttaaacagcttcacagatta 25431602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 21729151 - 21729064
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatctta 86  Q
    |||||||||||||||||||| || |||||||||||||||||||   |||||||||||||| ||||||| | ||||||| ||||||||||    
T  21729151 gcagcttagttaaataacaa-cagcaacataggcagtatacaaaatcagcatgacataataatatcaattgcaattcaacaacatctta 21729064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 21808476 - 21808389
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatctta 86  Q
    |||||||||||||||||||| || |||||||||||||||||||   |||||||||||||| ||||||| | ||||||| ||||||||||    
T  21808476 gcagcttagttaaataacaa-cagcaacataggcagtatacaaaatcagcatgacataataatatcaattgcaattcaacaacatctta 21808389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 178 - 275
Target Start/End: Original strand, 23512318 - 23512415
Alignment:
Q  178 aacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcacttgcactcagttctggaag 275  Q
    |||||||||||||||||  | || | |||||||||||| ||||||| |||| |||||||||||||||||   |||| || ||||||||||||||||||    
T  23512318 aacttcttatataggtcataatactacccaagggtccacctctaatcaaattatgcgacacagatcgcaacatcctaacatgcactcagttctggaag 23512415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 13025345 - 13025518
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaaca 98  Q
    ||||| ||||||||||||||  | |||||||||||||||||||  |||||||||||| | ||||||||| ||| ||| ||||||||||   || |||  |    
T  13025345 gcagcatagttaaataacaat-agcaacataggcagtatacaaaacagcatgacatattgatatcaaatgcaagtcaacaacatcttaaatattcaatta 13025443  T
Q  99 ttcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    | |||||| ||||| | | ||||||||| ||| || ||||||||| ||||||||||||  || ||||||| ||||    
T  13025444 tacttcaaataatgtacataacattatatcacatcgtaatcaacatcaacatatcttaaacaacttcacatatta 13025518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 13095529 - 13095702
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaaca 98  Q
    ||||| ||||||||||||||  | |||||||||||||||||||  |||||||||||| | ||||||||| ||| ||| ||||||||||   || |||  |    
T  13095529 gcagcatagttaaataacaat-agcaacataggcagtatacaaaacagcatgacatattgatatcaaatgcaagtcaacaacatcttaaatattcaatta 13095627  T
Q  99 ttcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    | |||||| ||||| | | ||||||||| ||| || ||||||||| ||||||||||||  || ||||||| ||||    
T  13095628 tacttcaaataatgtacataacattatatcacatcgtaatcaacatcaacatatcttaaacaacttcacatatta 13095702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 20027028 - 20026942
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat--acaacag--catgacataattatatcaaattcaattcatcaacatc 83  Q
    ||||||||||||||||||||||| |||||||||||||||  | |||||  ||||| ||||| ||||||||| ||||||| |||||||    
T  20027028 gcagcttagttaaataacaaacagcaacataggcagtatccaaaacagttcatgatataataatatcaaatgcaattcaacaacatc 20026942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 1096501 - 1096668
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 97  Q
    |||||||||||||||||||| || ||||| ||| ||||| |||   || ||| ||||||| ||||||||| ||| ||| |||||||| |   |||||  |    
T  1096501 gcagcttagttaaataacaa-cagcaacacaggtagtatgcaaaaacaacataacataataatatcaaatgcaaatcaacaacatctcacatatacattc 1096599  T
Q  98 attcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttca 165  Q
    ||  ||||||||||||||| ||||||||| ||| |||||||||||| ||||  ||||||  ||||||||    
T  1096600 ataattcaagtaatgcatataacattatatcacatcataatcaacatcaacgcatcttaaacagcttca 1096668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 21329584 - 21329500
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatc 83  Q
    ||||||||||||||||||||||| ||||||||||||||| |||  || ||| | ||||  ||||| ||||||| |||||||||||    
T  21329584 gcagcttagttaaataacaaacagcaacataggcagtatgcaaatcatcataatataacaatatcgaattcaagtcatcaacatc 21329500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 102 - 185
Target Start/End: Complemental strand, 22107357 - 22107273
Alignment:
Q  102 ttcaagtaatgcataa-acattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttctt 185  Q
    |||||||||||||||| | |||||| ||| |||||||||||||||||| | ||||  ||||||||||||||| || |||| ||||    
T  22107357 ttcaagtaatgcataatatattatatcacatcataatcaacaacaacacaccttaaacagcttcacagattataattaacctctt 22107273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 84
Target Start/End: Original strand, 22412220 - 22412302
Alignment:
Q  3 agcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatct 84  Q
    |||||||||||||||| |  | |||||||||||||||||||  |||||||||||||| ||||||||| ||| ||| ||||||||    
T  22412220 agcttagttaaataacgataa-caacataggcagtatacaaaacagcatgacataataatatcaaatgcaagtcaacaacatct 22412302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 86
Target Start/End: Original strand, 18418633 - 18418699
Alignment:
Q  20 aacatcaacataggcagtatac-aacagcatgacataattatatcaaattcaattcatcaacatctta 86  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||  | ||||||| ||||||||||    
T  18418633 aacatcaacataggcagtatacaaacagcatgacataataatatcatttgcaattca-caacatctta 18418699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 21997621 - 21997553
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatac---aacagcatgacataattatatcaaat 67  Q
    |||||||||||||||||||| || |||||||||||||||||   |||| ||||||||||| |||||||||    
T  21997621 gcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacaacatgacataataatatcaaat 21997553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 18356367 - 18356433
Alignment:
Q  20 aacatcaacataggcagtatac-aacagcatgacataattatatcaaattcaattcatcaacatctt 85  Q
    |||| |||||||||||| |||| |||||||||| ||||| ||||||| ||||||||| |||||||||    
T  18356367 aacagcaacataggcagcatacaaacagcatgatataataatatcaatttcaattcaacaacatctt 18356433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 19660922 - 19660884
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  19660922 gcagcttagttaaataacaaacagcaacataggcagtat 19660884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 20910866 - 20910800
Alignment:
Q  20 aacatcaacataggcagtatacaa-cagcatgacataattatatcaaattcaattcatcaacatctt 85  Q
    |||| |||||||| ||| |||||| |||||||||||||| ||||||| ||||||||| |||||||||    
T  20910866 aacagcaacatagacagcatacaaacagcatgacataataatatcaatttcaattcaacaacatctt 20910800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 22959619 - 22959581
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  22959619 gcagcttagttaaataacaaacagcaacataggcagtat 22959581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 21565576 - 21565659
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacat 82  Q
    ||||||||||||||||||||| | ||||||||||||||| |||  || ||||| ||||  ||||| ||| ||| ||||||||||    
T  21565576 gcagcttagttaaataacaaatagcaacataggcagtatccaaatcatcatgatataacaatatcgaatgcaagtcatcaacat 21565659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 22144083 - 22144121
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat 39  Q
    ||||||||||||||||||| ||||||||||||| |||||    
T  22144083 gcagcttagttaaataacagacatcaacataggtagtat 22144121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 36314611 - 36314649
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat 39  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  36314611 gcagcttagttaaataacaaacagcaacataggtagtat 36314649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 275
Target Start/End: Complemental strand, 21366594 - 21366477
Alignment:
Q  158 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 257  Q
    |||||||||||||  ||  |||| ||||| ||||||| ||||| | || ||||||||| | ||||| || | |||||| ||||||||||   | || |||    
T  21366594 cagcttcacagatctcagttaacatcttaaataggtcacattactacctaagggtccaaccctaatcaatttatgcgaaacagatcgcaacatactaact 21366495  T
Q  258 tgcactcagttctggaag 275  Q
    |||| |||||||||||||    
T  21366494 tgcattcagttctggaag 21366477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 21502243 - 21502156
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagta--tacaacagcatgacataattatatcaaattcaattcatcaacatctta 86  Q
    |||||||||||||  |||||||| ||||||||||||||  || | |||||||| ||||  ||||| ||| ||| |||||| |||||||    
T  21502243 gcagcttagttaataaacaaacagcaacataggcagtatgtaaatcagcatgatataacaatatcgaatgcaagtcatcatcatctta 21502156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 129; Significance: 8e-67; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 11185539 - 11185711
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacatt 100  Q
    ||||||||||||||||||||||| ||||||  ||||| ||||||| |||||||||||||||||||||||||||||||| |||||| || |||||||||||    
T  11185539 gcagcttagttaaataacaaacaacaacatgtgcagtgtacaacaacatgacataattatatcaaattcaattcatcagcatcttttgtatacaaacatt 11185638  T
Q  101 cttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattac 173  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  11185639 cttcaagtaatgcataaactttataacacttcataatcagcaacaacatatcttattcatcttcacagattac 11185711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 16920717 - 16920546
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacatt 100  Q
    ||||||||||||||||||||||| || |||||||||||||||||| |||||||||| |||||||||||| |||||||||||||||||| ||||||| |||    
T  16920717 gcagcttagttaaataacaaacagcagcataggcagtatacaacatcatgacataagtatatcaaattccattcatcaacatcttatgtatacaaatatt 16920618  T
Q  101 cttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||| ||||||    
T  16920617 cttcaagtaatgcataaacattataccacatcataatcaacaacaacttatcttattcagcttcatagatta 16920546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 22831537 - 22831710
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatctta--tgcatacaaaca 98  Q
    ||||||||||||||||||||||| ||||||||||| | | ||||  ||||||||||| ||||||||||||||||||||||||||||  || |||||||||    
T  22831537 gcagcttagttaaataacaaacagcaacataggcactgttcaacgacatgacataatcatatcaaattcaattcatcaacatcttagatgtatacaaaca 22831636  T
Q  99 ttcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  22831637 ttcttcaagtaatgcataaacattataacacatcataatcaacaacaacatatcttattcagcttcacagatta 22831710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 35245620 - 35245758
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacatt 100  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||| ||||||| |||    
T  35245620 gcagcttagttaattaacaaacaccaacataggcagtatacaacaacatgacataataatatcaatttcaattcatcaacatcttatgtatacaaatatt 35245719  T
Q  101 cttcaagtaatgcataaacattataacacttcataatca 139  Q
    ||||||||||||||||| ||||||| ||| |||||||||    
T  35245720 cttcaagtaatgcataatcattatatcacatcataatca 35245758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 20361047 - 20360873
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 97  Q
    |||||||||||||||||||| || |||||||||||| ||||||   |||||||||||||| ||||||| | ||||||||||||||||||   || ||||     
T  20361047 gcagcttagttaaataacaa-cagcaacataggcagcatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaat 20360949  T
Q  98 attcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    ||||||||||||||||||| ||||||||| ||| |||||||||||||||||| ||||||  |||||||||| ||||    
T  20360948 attcttcaagtaatgcatataacattatatcacatcataatcaacaacaacacatcttaaacagcttcacatatta 20360873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 158 - 275
Target Start/End: Original strand, 19873313 - 19873430
Alignment:
Q  158 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 257  Q
    |||||||||||||| ||  |||||||||||||||||||||||| | |||||||||||||||||||| |||| ||||||||||||||||| | |||| |||    
T  19873313 cagcttcacagattgcagttaacttcttatataggtctcattactacccaagggtccatctctaataaaatgatgcgacacagatcgcaatatccttact 19873412  T
Q  258 tgcactcagttctggaag 275  Q
    ||||||||||||||||||    
T  19873413 tgcactcagttctggaag 19873430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 158 - 275
Target Start/End: Original strand, 19863171 - 19863288
Alignment:
Q  158 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 257  Q
    |||||||||||||| ||  |||||||||||||||||||||||| | |||||||||||||||||||| |||| ||| ||||||||||||| | |||| |||    
T  19863171 cagcttcacagattgcagttaacttcttatataggtctcattactacccaagggtccatctctaatcaaatgatgtgacacagatcgcaatatccttact 19863270  T
Q  258 tgcactcagttctggaag 275  Q
    ||||||||||||||||||    
T  19863271 tgcactcagttctggaag 19863288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 20638370 - 20638196
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 97  Q
    |||||||||||||||||||| || |||||||||||||||||||   || ||||||||||| ||||||| | ||||| |||||||||||    || |||||    
T  20638370 gcagcttagttaaataacaa-caacaacataggcagtatacaaaaacaacatgacataataatatcaattgcaatttatcaacatctttaatattcaaac 20638272  T
Q  98 attcttcaagtaatgcataaa-cattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    ||||||||||||||||||||| | ||||| ||| |||||||||||| ||||| ||||||  |||||||||||||||    
T  20638271 attcttcaagtaatgcataaaacgttatatcacatcataatcaacatcaacacatcttaaacagcttcacagatta 20638196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 102 - 275
Target Start/End: Complemental strand, 25642168 - 25641994
Alignment:
Q  102 ttcaagtaatgca--taaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcatt 199  Q
    |||||||||||||  ||| ||||||| ||| ||||| ||||||  ||||| || ||  || ||||| ||||| ||  |||||||||||||||||||||||    
T  25642168 ttcaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataa-caacttcaaagattgcagttaacttcttatataggtctcatt 25642070  T
Q  200 attgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcacttgcactcagttctggaag 275  Q
    | | |||||||||||||||||||| |||| ||||||||||| ||||| | ||||||||||||||||||||||||||    
T  25642069 actacccaagggtccatctctaatcaaattatgcgacacagttcgcaatatcctcacttgcactcagttctggaag 25641994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 115 - 275
Target Start/End: Original strand, 22438951 - 22439110
Alignment:
Q  115 taaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtcc 214  Q
    ||||| ||||| ||| ||||||||||||  ||||| || ||  |||||||||||||| ||  ||||||||||||||| |||||||| | |||||||||||    
T  22438951 taaactttatatcacatcataatcaacactaacatctcataa-cagcttcacagattgcagttaacttcttatatagatctcattactacccaagggtcc 22439049  T
Q  215 atctctaattaaatcatgcgacacagatcgcattttcctcacttgcactcagttctggaag 275  Q
    ||||| |||  ||| ||||||||||||||||| | | ||||||||||||||||| ||||||    
T  22439050 atctcaaatcgaattatgcgacacagatcgcaatattctcacttgcactcagttgtggaag 22439110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 158 - 275
Target Start/End: Complemental strand, 22334819 - 22334702
Alignment:
Q  158 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 257  Q
    |||||| ||||||| ||  |||||||||||||||||||||||  | |||| ||||||| ||||||| |||| ||||||||||||||||| | ||||||||    
T  22334819 cagctttacagattgcagttaacttcttatataggtctcattgctacccaggggtccaactctaatcaaattatgcgacacagatcgcaatatcctcact 22334720  T
Q  258 tgcactcagttctggaag 275  Q
    |||| |||||||||||||    
T  22334719 tgcattcagttctggaag 22334702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 158 - 275
Target Start/End: Original strand, 22432443 - 22432560
Alignment:
Q  158 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 257  Q
    ||||||||||||||  |  |||||||||||||||||||||||| | |||||||||||||||| ||| |||| ||| ||||||||||||| | | || |||    
T  22432443 cagcttcacagattgtagttaacttcttatataggtctcattactacccaagggtccatctcaaatcaaataatgagacacagatcgcaatatactaact 22432542  T
Q  258 tgcactcagttctggaag 275  Q
    ||||||||||||||||||    
T  22432543 tgcactcagttctggaag 22432560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 29060574 - 29060748
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 97  Q
    |||||||||||||||||||| || |||||||||||||||||||   || ||||||||||| ||||||||| ||| ||| |||||||| | | |||||  |    
T  29060574 gcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacaacatgacataataatatcaaatgcaagtcaacaacatctcaagtatacattc 29060672  T
Q  98 attcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    ||  ||||||||||||| | ||||||||| | | |||||||||||| ||||| ||||||  |||||||||||||||    
T  29060673 ataattcaagtaatgcacataacattatatctcatcataatcaacatcaacacatcttaaacagcttcacagatta 29060748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 20593807 - 20593981
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatac---aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 97  Q
    |||||| |||||||||| ||||| ||||| | |||||||||   |||||||||||||||| ||||||||| ||| ||| |||||||| |   |||||| |    
T  20593807 gcagctcagttaaataa-aaacagcaacacatgcagtatacgaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaattatacaatc 20593905  T
Q  98 attcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    ||   ||||||||||| || |||| |||| ||| |||||||||||| ||||| ||||||  |||||||||||||||    
T  20593906 ataaatcaagtaatgcgtataacaatatatcacatcataatcaacatcaacacatcttaaacagcttcacagatta 20593981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 19303627 - 19303454
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaaca 98  Q
    |||||||||||||||||||| || ||||| ||| |||||||||  || ||||||||||| ||||||||| ||| ||| |||||||| |   |||||  ||    
T  19303627 gcagcttagttaaataacaa-caacaacacaggaagtatacaaaacaacatgacataataatatcaaatgcaagtcaacaacatctcaattatacattca 19303529  T
Q  99 ttcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    |  ||||||||||| | | ||||||||| ||| |||||||||||| ||||| |||||   |||||||||||||||    
T  19303528 tatttcaagtaatgtacataacattatatcacatcataatcaacatcaacacatcttcaacagcttcacagatta 19303454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 16496278 - 16496365
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatctta 86  Q
    |||||||||||||||||||| || |||||||||||||||||||   |||||||||||||| ||||||| | ||||||| ||||||||||    
T  16496278 gcagcttagttaaataacaa-cagcaacataggcagtatacaaaatcagcatgacataataatatcaattgcaattcaacaacatctta 16496365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 18409914 - 18409740
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatac---aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 97  Q
    |||||| ||||||||||||| || ||||| |||||||||||   |||| ||||||||||| ||||||||| ||| ||| |||||||| |  ||| ||  |    
T  18409914 gcagctcagttaaataacaa-cagcaacacaggcagtatacgaaaacaacatgacataataatatcaaatgcaagtcaacaacatctcaatcatccattc 18409816  T
Q  98 attcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    ||  ||||| |||| |||| ||||||||| ||| |||||||||||| ||||| ||||||  |||||||||| ||||    
T  18409815 ataattcaaataatacatataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacatatta 18409740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 25629442 - 25629268
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatac---aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 97  Q
    ||||||||||||||| |||| ||  |||| | |||||||||   |||||||||||||||  ||||||||| ||| ||| |||||||| |   |||||  |    
T  25629442 gcagcttagttaaattacaa-caggaacacatgcagtatacgaaaacagcatgacataacaatatcaaatgcaagtcaacaacatctcaattatacattc 25629344  T
Q  98 attcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    ||  |||||||||||| || ||||||||| ||| |||||||||||| ||||| ||||||  |||||||||||||||    
T  25629343 ataattcaagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagatta 25629268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 275
Target Start/End: Complemental strand, 15041596 - 15041361
Alignment:
Q  40 acaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaa-acattcttcaagtaatgcataaacattataacacttcataatc 138  Q
    ||||||||||||||| || ||||||||| |||||||  ||||||||| | || ||| | | ||| ||||||||||| | |||||| | ||  || ||||     
T  15041596 acaacagcatgacattataatatcaaatgcaattcaataacatcttaagtattcaataaaatct-caagtaatgcacatacattaaaccaaatcttaatt 15041498  T
Q  139 aacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacac 238  Q
    | || ||||| ||||||  |||||| |||||||  |  |||| || |   |||||||||||| | |||| ||||||||||||||| ||| ||||||| ||    
T  15041497 atcatcaacacatcttaaacagctttacagattgtatctaacatcatcattaggtctcattactacccaggggtccatctctaatcaaaacatgcgatac 15041398  T
Q  239 agatcgcattttcctcacttgcactcagttctggaag 275  Q
    ||||||| ||   |||||||||||||| |||||||||    
T  15041397 agatcgcgttaaactcacttgcactcaattctggaag 15041361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 189 - 275
Target Start/End: Complemental strand, 16924776 - 16924690
Alignment:
Q  189 taggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcacttgcactcagttctggaag 275  Q
    |||||||||||| | |||| |||||||   ||||| ||| ||||||||||||||||||||   ||||||||||||||||||||||||    
T  16924776 taggtctcattactacccaggggtccactcctaatcaaagcatgcgacacagatcgcattaaactcacttgcactcagttctggaag 16924690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 189 - 275
Target Start/End: Complemental strand, 31164744 - 31164658
Alignment:
Q  189 taggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcacttgcactcagttctggaag 275  Q
    ||||||||| || | |||| ||||||||||||||| ||| |||||||||||| |||||||   |||||||||||||| |||||||||    
T  31164744 taggtctcactactacccaggggtccatctctaatcaaaacatgcgacacaggtcgcattaaactcacttgcactcaattctggaag 31164658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 158 - 275
Target Start/End: Complemental strand, 15894357 - 15894240
Alignment:
Q  158 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 257  Q
    ||||||||||||||  |  |||| || |||||||||| ||||| | |||||||||||||||||||  || | |||||||||||  ||||   | ||||||    
T  15894357 cagcttcacagattgtagttaacatcctatataggtcacattactacccaagggtccatctctaaacaagttatgcgacacaggacgcaaagttctcact 15894258  T
Q  258 tgcactcagttctggaag 275  Q
    ||||||||||||||||||    
T  15894257 tgcactcagttctggaag 15894240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 158 - 275
Target Start/End: Original strand, 18907299 - 18907416
Alignment:
Q  158 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 257  Q
    |||||||||| ||| ||  |||| ||||| ||||||| ||||| | || ||||||||||| ||||| || |||||||||||||||||||   | |||| |    
T  18907299 cagcttcacatattgcagttaacatcttaaataggtcacattactacctaagggtccatccctaatcaattcatgcgacacagatcgcaacattctcatt 18907398  T
Q  258 tgcactcagttctggaag 275  Q
    ||||||| ||||||||||    
T  18907399 tgcactctgttctggaag 18907416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 22780314 - 22780140
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 97  Q
    |||||||||||||||||||| ||  |||||||||| |||||||   |||| ||||||||| ||||||| | ||| ||| || |||||||   || |||      
T  22780314 gcagcttagttaaataacaa-caaaaacataggcaatatacaaaaacagcttgacataataatatcaattgcaagtcaacatcatcttaaatattcaatt 22780216  T
Q  98 attcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    || ||||||||||||||   ||||||||| |||  ||||||||||| ||||| ||||||  |||||||||||||||    
T  22780215 atacttcaagtaatgcacgcaacattatatcacaacataatcaacatcaacacatcttaaacagcttcacagatta 22780140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 20076734 - 20076817
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatctta 86  Q
    |||||||||||||||||||| || |||||||||||||| ||||  |||||||||||||| ||||||||| |||   ||||||||||||    
T  20076734 gcagcttagttaaataacaa-cagcaacataggcagtaaacaaaacagcatgacataataatatcaaatgcaa---atcaacatctta 20076817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 17287883 - 17287713
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 97  Q
    |||||||||||||||||||| || ||||||||| |||||||||   |||||||||||||| ||||||| | ||| ||| || |||||||   || |||      
T  17287883 gcagcttagttaaataacaa-cagcaacataggtagtatacaaacacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattcaatt 17287785  T
Q  98 attcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacag 168  Q
    || |||||||||||||| | ||||||||  ||   ||||||||||  ||||| ||||||  |||||||||||    
T  17287784 atacttcaagtaatgcacataacattatgtcataacataatcaacctcaacacatcttaaacagcttcacag 17287713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 275
Target Start/End: Complemental strand, 21739950 - 21739833
Alignment:
Q  158 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 257  Q
    |||||||||||||| ||| |||| || |||||||||| ||||| | || ||| ||||||| ||||  || ||||| |||||||||||||   | |||| |    
T  21739950 cagcttcacagattgcaattaacatcctatataggtcacattactacctaagagtccatccctaaacaactcatgtgacacagatcgcaacattctcaat 21739851  T
Q  258 tgcactcagttctggaag 275  Q
    || |||||||||||||||    
T  21739850 tgtactcagttctggaag 21739833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 27333305 - 27333267
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  27333305 gcagcttagttaaataacaaacagcaacataggcagtat 27333267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 27394045 - 27394007
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  27394045 gcagcttagttaaataacaaacagcaacataggcagtat 27394007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 27416008 - 27415942
Alignment:
Q  20 aacatcaacataggcagtatacaa-cagcatgacataattatatcaaattcaattcatcaacatctt 85  Q
    |||| |||||||||||| |||||| ||||||||||||||  |||||| ||||||||| |||||||||    
T  27416008 aacagcaacataggcagcatacaaacagcatgacataatattatcaatttcaattcaacaacatctt 27415942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 275
Target Start/End: Complemental strand, 21834818 - 21834701
Alignment:
Q  158 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 257  Q
    |||||||||||||| ||  |||| ||||| |||||||  |||| | |  ||||||||||| ||||| || | |||||| ||||||||||   |||| |||    
T  21834818 cagcttcacagatttcagttaacatcttaaataggtcagattactactgaagggtccatccctaatcaatttatgcgaaacagatcgcaacatcctaact 21834719  T
Q  258 tgcactcagttctggaag 275  Q
    |||| |||||||||||||    
T  21834718 tgcattcagttctggaag 21834701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 25644354 - 25644440
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat---acaacagcatgacataattatatcaaattcaattcatcaacatct 84  Q
    ||||||||||||||||||| ||| |||||||||||||||   | |||||| ||| ||||  |||||||||  || ||||||||||||    
T  25644354 gcagcttagttaaataacagacagcaacataggcagtatgcaaaaacagcgtgatataacaatatcaaatgtaagtcatcaacatct 25644440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 25656660 - 25656727
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaat 67  Q
    |||||||||||||||||||| || |||||||| ||||||||||   |||||||||||||| |||||||||    
T  25656660 gcagcttagttaaataacaa-cagcaacatag-cagtatacaaaaacagcatgacataataatatcaaat 25656727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 9098601 - 9098563
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat 39  Q
    ||||||||||||||||||||||| ||||| |||||||||    
T  9098601 gcagcttagttaaataacaaacagcaacaaaggcagtat 9098563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 19652229 - 19652267
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat 39  Q
    |||||||||||||| |||||||| |||||||||||||||    
T  19652229 gcagcttagttaaacaacaaacaacaacataggcagtat 19652267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 20109172 - 20109257
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat--acaacagcatgacataattatatcaaattcaattcatcaacatct 84  Q
    |||||||||||||  |||||||| |||||||||||||||  | |||| ||| | ||||  ||||||||| ||| ||||||||||||    
T  20109172 gcagcttagttaataaacaaacagcaacataggcagtatgcaaaacaacataatataacaatatcaaatgcaagtcatcaacatct 20109257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 1595580 - 1595660
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaac 80  Q
    |||||||||||||||||||| || |||||||  ||||||||||   || ||||||||||| ||||||||| ||||||| ||||    
T  1595580 gcagcttagttaaataacaa-cagcaacataa-cagtatacaaaaacaacatgacataataatatcaaatgcaattcaacaac 1595660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 275
Target Start/End: Complemental strand, 16965177 - 16965121
Alignment:
Q  219 ctaattaaatcatgcgacacagatcgcattttcctcacttgcactcagttctggaag 275  Q
    ||||| ||| ||||||||||||||| ||||   |||||||||||| |||||||||||    
T  16965177 ctaatcaaagcatgcgacacagatcacattaaactcacttgcactaagttctggaag 16965121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 22782258 - 22782338
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaac 80  Q
    |||||||||||||||||||| || ||||| || ||||||||||   |||||||||||||| ||||||||| ||| ||| ||||    
T  22782258 gcagcttagttaaataacaa-cagcaacacag-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaac 22782338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 124; Significance: 8e-64; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 38801475 - 38801304
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacatt 100  Q
    ||||||||||||||||||||||| ||||||||||||| | |||||||| ||||||||||||||||||||||||||||||||| ||||  ||||||  |||    
T  38801475 gcagcttagttaaataacaaacagcaacataggcagtgtgcaacagcaagacataattatatcaaattcaattcatcaacatattatatatacaattatt 38801376  T
Q  101 cttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| ||||    
T  38801375 cttcaagtaatgcataaacattataacacatcgtaatcaacaacaacatatcttattcagcttcacaaatta 38801304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 102 - 275
Target Start/End: Original strand, 21714684 - 21714858
Alignment:
Q  102 ttcaagtaatgca--taaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcatt 199  Q
    |||||||||||||  ||||||||||| ||| ||||| ||||||  ||||| || ||  |||||||||||||| ||  |||||||||||||||||||||||    
T  21714684 ttcaagtaatgcaattaaacattatatcacatcatattcaacactaacatctcataa-cagcttcacagattgcagttaacttcttatataggtctcatt 21714782  T
Q  200 attgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcacttgcactcagttctggaag 275  Q
    | | |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21714783 actacccaagggtccatctctaatcaaatcatgcgacacagatcgcattttcctcacttgcactcagttctggaag 21714858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 27250816 - 27250629
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 97  Q
    ||||||||||||||||||||  | |||||||||||||||||||   |||||||||||||| ||||||| | ||||||||||||||||||   || ||||     
T  27250816 gcagcttagttaaataacaat-agcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaat 27250718  T
Q  98 attcttcaagtaatgcat-aaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttctt 185  Q
    ||| |||||||||||||| |||||||||| ||| |||||||||||||||||| ||||||  ||||||||||||||| || |||| ||||    
T  27250717 attattcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacagattataattaacctctt 27250629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 103 - 270
Target Start/End: Original strand, 48603652 - 48603820
Alignment:
Q  103 tcaagtaatgcataaa-cattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcattat 201  Q
    |||||||||||||||| ||||||| ||| |||||||||||||||||| ||||||  ||||||||||||||| || |||||||||||||||||| || ||     
T  48603652 tcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacagattataattaacttcttatataggtcacaatac 48603751  T
Q  202 tgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcacttgcactcagttct 270  Q
    | || | ||||||||||||||| || |||||| ||||||||||||   |||| ||||||||||||||||    
T  48603752 tacctaggggtccatctctaatcaattcatgcaacacagatcgcaacatcctaacttgcactcagttct 48603820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 158 - 275
Target Start/End: Complemental strand, 20091401 - 20091284
Alignment:
Q  158 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 257  Q
    |||||||||||||| ||  |||||||||| ||||||||||||| | |||||||||||||||| ||| |||| ||||||||||||||||| | |||||| |    
T  20091401 cagcttcacagattgcagttaacttcttaaataggtctcattactacccaagggtccatctcaaatcaaattatgcgacacagatcgcaatatcctcatt 20091302  T
Q  258 tgcactcagttctggaag 275  Q
    ||||||||||||||||||    
T  20091301 tgcactcagttctggaag 20091284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 158 - 275
Target Start/End: Complemental strand, 42865139 - 42865022
Alignment:
Q  158 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 257  Q
    |||||||||||||| ||  |||| ||||||||||||| ||||| | |||||||||||||||||||| |||| |||||||||||||||||   ||||||||    
T  42865139 cagcttcacagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaacatcctcact 42865040  T
Q  258 tgcactcagttctggaag 275  Q
    ||||||||||||||||||    
T  42865039 tgcactcagttctggaag 42865022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 21026714 - 21026901
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 97  Q
    |||||||||||||||||||| || ||| |||||||||||||||   ||||||||| ||| |||||||| | ||||||| ||||||||||   || ||||     
T  21026714 gcagcttagttaaataacaa-cagcaatataggcagtatacaaaatcagcatgacgtaaatatatcaattgcaattcaacaacatcttaaatattcaaat 21026812  T
Q  98 attcttcaagtaatgcataaa-cattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttctt 185  Q
    | |  |||||||||||||||| ||||||| ||| |||||||||||| ||||| ||||||  ||||||||||||||| || |||| ||||    
T  21026813 aattctcaagtaatgcataaaacattatatcacatcataatcaacagcaacacatcttaaacagcttcacagattataattaacctctt 21026901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 50210300 - 50210126
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 97  Q
    |||||||||||||||||||| || |||||||||||||||||||   || ||||||||||| ||||||||| ||| ||| |||||||| | | |||||  |    
T  50210300 gcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacaacatgacataataatatcaaatgcaagtcaacaacatctcaagtatacattc 50210202  T
Q  98 attcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    ||  |||||||||||| |  ||||||||| ||| |||||||||||| ||||| ||||||  |||||||||||||||    
T  50210201 ataattcaagtaatgcgtttaacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagatta 50210126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 42 - 172
Target Start/End: Complemental strand, 22354616 - 22354485
Alignment:
Q  42 aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aacattataacacttcataatcaa 140  Q
    |||||||||||||||  ||||||| | ||||||||||||||||||   || |||| ||||||||||||||| ||| ||||||||| ||| ||||||||||    
T  22354616 aacagcatgacataaaaatatcaattgcaattcatcaacatcttaaatattcaaatattcttcaagtaatgtatataacattatatcacatcataatcaa 22354517  T
Q  141 caacaacatatcttattcagcttcacagatta 172  Q
    || ||||| ||||||  |||||||||||||||    
T  22354516 catcaacacatcttaaacagcttcacagatta 22354485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 34509814 - 34509988
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 97  Q
    |||||||||||||||||||| || |||||||||||||||||||   |||||||||||||| ||||||||| ||| ||| ||||||||||   |||||  |    
T  34509814 gcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacataatgatatcaaatgcaagtcaacaacatcttaattatacattc 34509912  T
Q  98 attcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    ||   ||||||||||| || ||||||||| ||| ||||| |||||| ||||| ||||||  |||||||| ||||||    
T  34509913 atatctcaagtaatgcttataacattatatcacatcatattcaacatcaacacatcttaaacagcttcaaagatta 34509988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 40 - 275
Target Start/End: Complemental strand, 22468742 - 22468507
Alignment:
Q  40 acaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aacattataacacttcataatc 138  Q
    ||||||||||||||| || ||||||| | ||||||| ||||||||||   || |||  ||   |||||||||||| | ||||||||| ||| |||||||     
T  22468742 acaacagcatgacatcataatatcaattgcaattcaacaacatcttaattattcaataatatctcaagtaatgcacataacattatatcacatcataatt 22468643  T
Q  139 aacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacac 238  Q
    | || || || ||||||  ||||||||||||||| || || |  |||  | |||||||| || | ||||||||||||||||||||  ||| |||||||||    
T  22468642 a-catcagcacatcttaaacagcttcacagattataattaccaacttcaaaaggtctcaatactacccaagggtccatctctaatcgaattatgcgacac 22468544  T
Q  239 agatcgcattttcctcacttgcactcagttctggaag 275  Q
    | |||||| |  |||||||||||||||||||||||||    
T  22468543 atatcgcaataccctcacttgcactcagttctggaag 22468507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 40 - 271
Target Start/End: Complemental strand, 21788088 - 21787857
Alignment:
Q  40 acaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacat-tcttcaagtaatgcata-aacattataacacttcataat 137  Q
    ||||||||||||| |  | ||||||| |||| |||| ||||||||||  ||| |||  || |||| |||||||||| | |||||||||  || |||||||    
T  21788088 acaacagcatgacttcgtaatatcaatttcatttcaacaacatcttaatcattcaataatatctt-aagtaatgcacataacattatataacatcataat 21787990  T
Q  138 caacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgaca 237  Q
    ||||| |||||| || ||  ||||| || ||||| ||  |||||||||||||||||  ||||| | |||||||||||||||||||  || | ||||||||    
T  21787989 caacatcaacatttcataa-cagctgcatagattgcagttaacttcttatataggttacattactacccaagggtccatctctaaacaagttatgcgaca 21787891  T
Q  238 cagatcgcattttcctcacttgcactcagttctg 271  Q
    ||| |||||  || ||||||||||||||||||||    
T  21787890 caggtcgcaaatttctcacttgcactcagttctg 21787857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 168
Target Start/End: Original strand, 22532308 - 22532473
Alignment:
Q  6 ttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattct 102  Q
    ||||||||||||||| || |||||||||||||||||||   |||||||||||||| ||||| | | ||||||| ||||||||||   || ||  |||  |    
T  22532308 ttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacataataatatccattgcaattcaacaacatcttaaatattcattcataat 22532406  T
Q  103 tcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacag 168  Q
    |||||||||||| | ||||||||| ||| |||||||||||| ||||| ||||||  |||||||||||    
T  22532407 tcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacag 22532473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 158 - 275
Target Start/End: Original strand, 6152046 - 6152163
Alignment:
Q  158 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 257  Q
    |||||||||||||| ||| |||| || |||||||||| ||||| | || ||| ||||||| ||||| || |||||||||||||||||||   |||| ||     
T  6152046 cagcttcacagattgcaattaacatcctatataggtcacattactacctaagagtccatccctaatcaattcatgcgacacagatcgcaacatcctaaca 6152145  T
Q  258 tgcactcagttctggaag 275  Q
    |||| |||||||||||||    
T  6152146 tgcattcagttctggaag 6152163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 158 - 275
Target Start/End: Complemental strand, 18182049 - 18181932
Alignment:
Q  158 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 257  Q
    ||||||||||| || ||  |||||||||||| | ||| ||||| | || ||| ||||||| ||||| || | |||||||||||||||||   |||| |||    
T  18182049 cagcttcacagtttgcagttaacttcttatacaagtcacattactacctaagagtccatccctaatcaatttatgcgacacagatcgcaacatcctaact 18181950  T
Q  258 tgcactcagttctggaag 275  Q
    ||||||||||||||||||    
T  18181949 tgcactcagttctggaag 18181932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 40 - 172
Target Start/End: Original strand, 20135262 - 20135395
Alignment:
Q  40 acaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aacattataacacttcataatc 138  Q
    |||||| ||||||||||| ||||||  | ||||||| |||||||||| | || |||  |  |||||||||||||||| ||||||||| ||  |||||||     
T  20135262 acaacatcatgacataataatatcatgtgcaattcaacaacatcttaagtattcaataaaacttcaagtaatgcatacaacattatatcatatcataatg 20135361  T
Q  139 aacaacaacatatcttattcagcttcacagatta 172  Q
    |||| ||||| ||||||  |||||||||||||||    
T  20135362 aacatcaacacatcttaaacagcttcacagatta 20135395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 158 - 275
Target Start/End: Complemental strand, 22831306 - 22831189
Alignment:
Q  158 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 257  Q
    |||||||||||||| ||| |||| || |||||||||| ||||| | || ||| ||||||| ||||  || |||||||||||||||||||   | |||| |    
T  22831306 cagcttcacagattgcaattaacatcctatataggtcacattactacctaagagtccatccctaaacaagtcatgcgacacagatcgcaacattctcaat 22831207  T
Q  258 tgcactcagttctggaag 275  Q
    |||||||||||| |||||    
T  22831206 tgcactcagttcaggaag 22831189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 21896339 - 21896258
Alignment:
Q  5 cttagttaaataacaaacatcaacataggcagtatac--aacagcatgacataattatatcaaattcaattcatcaacatct 84  Q
    |||||||||  |||||||| |||||||||||||||||  |||||||||| ||||  ||||||||| ||| ||||||||||||    
T  21896339 cttagttaataaacaaacagcaacataggcagtatacaaaacagcatgatataacaatatcaaatgcaagtcatcaacatct 21896258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 20847241 - 20847173
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaat 67  Q
    |||||||||||||||||||| || |||||||||||||| ||||   ||||||||||||| ||||||||||    
T  20847241 gcagcttagttaaataacaa-cagcaacataggcagtacacaaaatcagcatgacataaatatatcaaat 20847173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 21754079 - 21754117
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  21754079 gcagcttagttaaataacaaacaacaacataggcagtat 21754117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 21861657 - 21861572
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatct 84  Q
    ||||||||| |||  |||||||| ||||||||||||||| |||  |||||||| ||||  ||||||||| ||| ||||||||||||    
T  21861657 gcagcttagctaataaacaaacagcaacataggcagtatgcaaaacagcatgatataacaatatcaaatgcaagtcatcaacatct 21861572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 22921956 - 22921918
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  22921956 gcagcttagttaaataacaaacaacaacataggcagtat 22921918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 172
Target Start/End: Complemental strand, 22356168 - 22356087
Alignment:
Q  93 caaacattcttcaagtaatgcata-aacattataacacttcataatcaa-caacaacatatcttattcagcttcacagatta 172  Q
    |||||||||||||||||||||| | ||||||||| ||| |||||||||| || ||||| ||||||   ||||||||||||||    
T  22356168 caaacattcttcaagtaatgcacataacattatatcacatcataatcaatcatcaacacatcttaaatagcttcacagatta 22356087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 172
Target Start/End: Complemental strand, 22357854 - 22357773
Alignment:
Q  93 caaacattcttcaagtaatgcata-aacattataacacttcataatcaa-caacaacatatcttattcagcttcacagatta 172  Q
    |||||||||||||||||||||| | ||||||||| ||| |||||||||| || ||||| ||||||   ||||||||||||||    
T  22357854 caaacattcttcaagtaatgcacataacattatatcacatcataatcaatcatcaacacatcttaaatagcttcacagatta 22357773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 243
Target Start/End: Original strand, 21022830 - 21022914
Alignment:
Q  159 agcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatc 243  Q
    ||||||||||||| ||  |||| ||||||||||||| ||||| | || |||||||||||  |||| |||||| || |||||||||    
T  21022830 agcttcacagattgcagttaacatcttatataggtcacattactacctaagggtccatccttaatcaaatcaagcaacacagatc 21022914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 35261165 - 35261051
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat--acaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaaca 98  Q
    |||||||||||||  |||||||| |||||||||||||||  | |||||||||| ||||  ||||||||| |||   |||||||||| |  ||| || |||    
T  35261165 gcagcttagttaataaacaaacagcaacataggcagtatgcaaaacagcatgatataacaatatcaaatgcaa---atcaacatctcaaacattcataca 35261069  T
Q  99 ttcttcaagtaatgcata 116  Q
    |  |||||||||||||||    
T  35261068 taattcaagtaatgcata 35261051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 45574974 - 45574893
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat---acaacagcatgacataattatatcaaattcaattcatcaac 80  Q
    |||||||||||||||||| |||| |||||||||||||||   | |||||||||||||||| ||| ||||| ||| ||| ||||    
T  45574974 gcagcttagttaaataac-aacagcaacataggcagtatgcaaaaacagcatgacataataataccaaatgcaagtcaacaac 45574893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 14295638 - 14295600
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat 39  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  14295638 gcagcttagttaaataacaaacagcaacataggtagtat 14295600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 39
Target Start/End: Original strand, 16758687 - 16758721
Alignment:
Q  5 cttagttaaataacaaacatcaacataggcagtat 39  Q
    ||||||||||||||||||| |||||||||||||||    
T  16758687 cttagttaaataacaaacagcaacataggcagtat 16758721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 20918638 - 20918676
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat 39  Q
    ||||||||||||||||||||||  |||||||||||||||    
T  20918638 gcagcttagttaaataacaaactgcaacataggcagtat 20918676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 39
Target Start/End: Original strand, 33681045 - 33681079
Alignment:
Q  5 cttagttaaataacaaacatcaacataggcagtat 39  Q
    ||||||||||||||||||| |||||||||||||||    
T  33681045 cttagttaaataacaaacagcaacataggcagtat 33681079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 33797573 - 33797639
Alignment:
Q  20 aacatcaacataggcagtatacaa-cagcatgacataattatatcaaattcaattcatcaacatctt 85  Q
    |||| ||||||| |||| |||||| || ||||||||||| ||||||| ||||||||| |||||||||    
T  33797573 aacagcaacatatgcagcatacaaacaacatgacataataatatcaatttcaattcaacaacatctt 33797639  T

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Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 52928057 - 52928019
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat 39  Q
    ||||||||||||||||||||||| |||||||| ||||||    
T  52928057 gcagcttagttaaataacaaacaacaacatagacagtat 52928019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 275
Target Start/End: Complemental strand, 22449194 - 22449077
Alignment:
Q  158 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 257  Q
    |||||||||||||| ||  |||| ||||||||| ||| ||||| | || ||||||||||  ||||| || ||| || || |||||| ||   | |||| |    
T  22449194 cagcttcacagattgcagttaacatcttatatatgtcacattactacctaagggtccattcctaatcaattcaagcaactcagatcacaacattctcatt 22449095  T
Q  258 tgcactcagttctggaag 275  Q
    ||||||||||||||||||    
T  22449094 tgcactcagttctggaag 22449077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 84
Target Start/End: Original strand, 22237663 - 22237746
Alignment:
Q  3 agcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatct 84  Q
    ||||||||||||||||||||| | ||||||||| ||| |||  || ||||| ||||  ||||| ||| ||| ||||||||||||    
T  22237663 agcttagttaaataacaaacagcgacataggcattatgcaaatcatcatgatataacaatatcgaatgcaagtcatcaacatct 22237746  T

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Target: scaffold0064 (Bit Score: 118; Significance: 3e-60; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 3 - 172
Target Start/End: Original strand, 47031 - 47200
Alignment:
Q  3 agcttagttaaataacaaacatcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattct 102  Q
    ||||||||||||||||||||| ||||||||||||| |||| |||||||||||||| ||||||| |||||||||||||||||||||| ||||||| |||||    
T  47031 agcttagttaaataacaaacaacaacataggcagtttacagcagcatgacataataatatcaatttcaattcatcaacatcttatgtatacaaatattct 47130  T
Q  103 tcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
     |||||||||||||||||||||| ||| |||||| || |||||||||||||||| |||||||||||||||    
T  47131 ccaagtaatgcataaacattatatcacatcataaacatcaacaacatatcttatacagcttcacagatta 47200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 114; Significance: 7e-58; HSPs: 1)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 53 - 274
Target Start/End: Original strand, 26911 - 27130
Alignment:
Q  53 ataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatc 152  Q
    ||||||||||||| |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| || ||||||||||||  ||||| ||    
T  26911 ataattatatcaa-ttcaattcatcaacatcttatgtatacaaatattcttcaagtaatgcataaacattataatacatcataatcaacacaaacatctc 27009  T
Q  153 ttattcagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcc 252  Q
     ||  |||||||||||||| ||  |||||||||||||| ||||||||| | |||||||||||||||||||  |||  || ||| |||||||||| | |||    
T  27010 ata-acagcttcacagattgcagttaacttcttatatatgtctcattactacccaagggtccatctctaaacaaaatattcgaaacagatcgcaatatcc 27108  T
Q  253 tcacttgcactcagttctggaa 274  Q
    ||||||||||||||||||||||    
T  27109 tcacttgcactcagttctggaa 27130  T

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Target: scaffold0456 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 10510 - 10339
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacatt 100  Q
    ||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||| | ||||||| |||    
T  10510 gcagcatagttaattaacaaacagcaacataggcagtatacaacagcatgacataataatatcaatttcaattcaacaacatcttaagtatacaaatatt 10411  T
Q  101 cttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    ||||||||||||||||| ||||||| ||| ||||||||| |||| ||||||||||| |||||||||||||||    
T  10410 cttcaagtaatgcataatcattatatcacatcataatcatcaacgacatatcttatacagcttcacagatta 10339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 111; Significance: 4e-56; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 13531 - 13703
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaaca 98  Q
    |||||||||||||||||||| || |||||||||||||||||||  || |||||||| || ||||||| ||| |||||||||||||||||| |||||||||    
T  13531 gcagcttagttaaataacaa-cagcaacataggcagtatacaaaacaacatgacatgataatatcaatttcgattcatcaacatcttatgtatacaaaca 13629  T
Q  99 ttcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||| |||||||||||||||    
T  13630 ttcttcaagtaatgcataaacattatatcacatcataatcaacaacgacatatcttatacagcttcacagatta 13703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 109; Significance: 7e-55; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 32101 - 32272
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa-cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacat 99  Q
    |||||||||||||||||||| || |||||||||||||| |||| || ||||||||||| ||||||| |||||||||||||||||||| | ||||||| ||    
T  32101 gcagcttagttaaataacaa-cagcaacataggcagtaaacaaacaacatgacataataatatcaatttcaattcatcaacatcttaggtatacaaatat 32199  T
Q  100 tcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    |||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||| |||||||||||||||    
T  32200 tcttcaagtaatgcataaacattatatcacatcataatcaacaacgacatatcttatacagcttcacagatta 32272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 103; Significance: 3e-51; HSPs: 2)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 15550 - 15378
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaaca 98  Q
    ||||||||||||||||||||  | |||||||||||||||||||  || ||||||||||| ||||||| |||||||||||||||||||||| ||| ||| |    
T  15550 gcagcttagttaaataacaag-agcaacataggcagtatacaaaacaacatgacataataatatcaatttcaattcatcaacatcttatgtataaaaata 15452  T
Q  99 ttcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    |||||||||||||||||||| |||||| ||| ||||||||| |||||||||||||||| |||||||||||||||    
T  15451 ttcttcaagtaatgcataaatattatatcacatcataatcatcaacaacatatcttatacagcttcacagatta 15378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 53 - 223
Target Start/End: Original strand, 7378 - 7546
Alignment:
Q  53 ataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatc 152  Q
    ||||||||| |||||||||||||||||||||||||| ||||||  | ||||||||||||||||||||||||||| || ||||| |||||   ||||| ||    
T  7378 ataattata-caaattcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcatattcaacgcaaacatctc 7476  T
Q  153 ttattcagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaat 223  Q
     || |||| |||| ||||| ||  |||||||||||||||||||||||| | || ||||||||||| |||||    
T  7477 ata-tcagtttcatagattgcagttaacttcttatataggtctcattactacctaagggtccatccctaat 7546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 101; Significance: 4e-50; HSPs: 2)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 4746 - 4919
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 97  Q
    |||||||||||||||||||| || |||||||||||||||||||   ||||||||||||| || ||||| | ||||||||||| |||||||| |||||||     
T  4746 gcagcttagttaaataacaa-caacaacataggcagtatacaaaaacagcatgacataaatacatcaattgcaattcatcaaaatcttatgtatacaaat 4844  T
Q  98 attcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    ||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||| || ||||||||||||    
T  4845 attcttcaagtaaggcataaacattatatcacatcataatcaacaacaacatatcttatacaacttcacagatta 4919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 42 - 172
Target Start/End: Original strand, 13 - 143
Alignment:
Q  42 aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacattataacacttcataatcaac 141  Q
    ||||||||||||||| || ||||| | ||||||||||| |||||||| ||||||| ||||||||||||| |||||||||||||| ||| |||||||||||    
T  13 aacagcatgacataaatacatcaattgcaattcatcaaaatcttatgtatacaaatattcttcaagtaaggcataaacattatatcacatcataatcaac 112  T
Q  142 aacaacatatcttattcagcttcacagatta 172  Q
    ||||||||||||||| || ||||||||||||    
T  113 aacaacatatcttatacaacttcacagatta 143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 102 - 275
Target Start/End: Original strand, 69930 - 70104
Alignment:
Q  102 ttcaagtaatgca--taaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcatt 199  Q
    |||||||||||||  ||| ||||||| ||| ||||| ||||||  ||||| || ||  |||||||||||||| ||  |||||||||||||||||||||||    
T  69930 ttcaagtaatgcaattaatcattatatcacatcatattcaacactaacatctcataa-cagcttcacagattgcagttaacttcttatataggtctcatt 70028  T
Q  200 attgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcacttgcactcagttctggaag 275  Q
    | | |||||||||||||||||||| |||| ||||||||||||||||| | ||||||||||||||||||||||||||    
T  70029 actacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctggaag 70104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 85; Significance: 1e-40; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 20698522 - 20698349
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 97  Q
    |||||||||||||||||||| || |||||||||||||||||||   ||||||||| |||| ||||||| | |||||||||||||||||||  || ||||     
T  20698522 gcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttatatattcaaat 20698424  T
Q  98 attcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    |||||||||||||||||||||||||||| ||| |||||||||||  ||||| |||||   |||||||||||||||    
T  20698423 attcttcaagtaatgcataaacattatatcacatcataatcaacttcaacacatcttgaacagcttcacagatta 20698349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 65 - 275
Target Start/End: Original strand, 856234 - 856443
Alignment:
Q  65 aattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttc 164  Q
    ||||||||||| |||||||||||| ||||||  | |||||||||||| |||||||||||||| || ||||| || |||  ||||| || |||  ||||||    
T  856234 aattcaattcaacaacatcttatgtatacaattaatcttcaagtaatacataaacattataatacatcatattcgacacaaacatctcatata-agcttc 856332  T
Q  165 acagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcacttgcactc 264  Q
    ||||||| ||  |||||||||||||||||||||||| | || ||||||||||| ||||| || ||| || ||||||||| ||   | |||||||||||||    
T  856333 acagattgcagttaacttcttatataggtctcattactacctaagggtccatccctaatcaattcaagcaacacagatcacaacattctcacttgcactc 856432  T
Q  265 agttctggaag 275  Q
    |||||||||||    
T  856433 agttctggaag 856443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 12399243 - 12399417
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 97  Q
    |||||||||||||||||||| || |||||||||||||||||||   |||||||||||||| ||||||||| ||||||| ||||||||||   || ||||     
T  12399243 gcagcttagttaaataacaa-cagcaacataggcagtatacaaaatcagcatgacataataatatcaaatgcaattcaacaacatcttaaatattcaaat 12399341  T
Q  98 attcttcaagtaatgcataa-acattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    | |  ||||||||||||||| |||||||| ||| |||||||||||||||||| ||||||   ||||||||||||||    
T  12399342 aattctcaagtaatgcataagacattatatcacatcataatcaacaacaacacatcttaaatagcttcacagatta 12399417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 13442308 - 13442482
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 97  Q
    |||||||||||||||||||| |  |||||||||||||||||||   || ||||||||||| ||||||| | ||||||||||||||||||   || ||||     
T  13442308 gcagcttagttaaataacaa-cggcaacataggcagtatacaaaaacaacatgacataataatatcaattgcaattcatcaacatcttaaatattcaaat 13442406  T
Q  98 attcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    ||||||||||||||||| | ||||||||| ||| |||||||||||| ||||| ||||||  |||||||||||||||    
T  13442407 attcttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagatta 13442482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 17487890 - 17488064
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 97  Q
    |||||||||||||||||||| || ||| |||| ||||||||||   |||||||||||||| ||||||| | ||||||||||||||||||   || ||||     
T  17487890 gcagcttagttaaataacaa-cagcaaaatagacagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaat 17487988  T
Q  98 attcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    ||||||||||||||||||| ||||||||| ||| |||||||||||| ||||| ||||||  ||| |||||||||||    
T  17487989 attcttcaagtaatgcatataacattatatcacatcataatcaacatcaacacatcttaaacagattcacagatta 17488064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 158 - 275
Target Start/End: Complemental strand, 17525080 - 17524963
Alignment:
Q  158 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 257  Q
    |||||||||||||| ||  |||||||||||||||||| ||||| | |||||||||||||||||||| |||| ||||||||||||||||| | ||||||||    
T  17525080 cagcttcacagattgcagttaacttcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcact 17524981  T
Q  258 tgcactcagttctggaag 275  Q
    ||||||||||| ||||||    
T  17524980 tgcactcagttttggaag 17524963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 14972888 - 14973062
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 97  Q
    |||||||||||||||||||| || ||||| |||||||||||||   |||||||||||||| ||||||||| ||| ||| |||||||| ||  |||||  |    
T  14972888 gcagcttagttaaataacaa-cagcaacacaggcagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacatctcatatatacattc 14972986  T
Q  98 attcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    ||  ||||||||||||||| ||||||||| ||| |||||||||||| ||||| ||||||  |||||||| ||||||    
T  14972987 ataattcaagtaatgcatataacattatatcacatcataatcaacatcaacacatcttaaacagcttcatagatta 14973062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 17499372 - 17499546
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 97  Q
    |||||||||||||||||||| || ||| |||| ||||||||||   |||||||||||||| ||||||| | ||||||||||||||||||   || ||||     
T  17499372 gcagcttagttaaataacaa-cagcaaaatagacagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaat 17499470  T
Q  98 attcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    ||||||||||||||||||| ||||||||| ||| ||| |||||||| ||||| ||||||  ||| |||||| ||||    
T  17499471 attcttcaagtaatgcatataacattatatcacatcaaaatcaacatcaacacatcttaaacagattcacaaatta 17499546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 103 - 222
Target Start/End: Original strand, 14179570 - 14179690
Alignment:
Q  103 tcaagtaatgcataaa-cattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcattat 201  Q
    |||||||||||||||| ||||||| ||| |||||||||||||||||| ||||||  ||||||||||||||| || |||||||||||||||||| || ||     
T  14179570 tcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacagattataattaacttcttatataggtcacaatac 14179669  T
Q  202 tgcccaagggtccatctctaa 222  Q
    | |||| ||||||||||||||    
T  14179670 tacccaggggtccatctctaa 14179690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 275
Target Start/End: Complemental strand, 15877727 - 15877639
Alignment:
Q  187 tataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcacttgcactcagttctggaag 275  Q
    |||||||||||||| | |||||||||||||||||||| |||| ||||||||| ||||||| | ||||||||||||||||||||||||||    
T  15877727 tataggtctcattactacccaagggtccatctctaatcaaattatgcgacactgatcgcaatatcctcacttgcactcagttctggaag 15877639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 115 - 275
Target Start/End: Original strand, 23408581 - 23408740
Alignment:
Q  115 taaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtcc 214  Q
    ||||||||||| ||| ||||| ||||||  ||||| || ||  |||||||||||||| ||  |||||||| | ||||||  || || | |||||||||||    
T  23408581 taaacattatatcacatcatattcaacactaacatctcataa-cagcttcacagattgcagttaacttctaaaataggtaacaatactacccaagggtcc 23408679  T
Q  215 atctctaattaaatcatgcgacacagatcgcattttcctcacttgcactcagttctggaag 275  Q
    ||||||||| |||| ||||||||||||||||| | |||||||||||||| |||||||||||    
T  23408680 atctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactaagttctggaag 23408740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 172
Target Start/End: Complemental strand, 14576915 - 14576746
Alignment:
Q  5 cttagttaaataacaaacatcaacataggcagtata--caacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattct 102  Q
    |||||||||||||||| || |||||||| |||||||  ||||||||||||||||| ||||||| | ||| ||| ||||||||||   || |||  || ||    
T  14576915 cttagttaaataacaa-cagcaacatagacagtataaacaacagcatgacataataatatcaattgcaagtcaacaacatcttaaatattcaattatact 14576817  T
Q  103 tcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    |||||||||||||| ||||||||| ||| |||||||||||| ||||| ||||||  || ||||||||||||    
T  14576816 tcaagtaatgcatataacattatatcacatcataatcaacatcaacacatcttaaacaacttcacagatta 14576746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 172
Target Start/End: Original strand, 18438570 - 18438742
Alignment:
Q  3 agcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacat 99  Q
    |||||||||||||||||| || |||||||||||||||||||   |||||||| ||||| ||||||||| ||| ||| ||||||||| |  |||||  |||    
T  18438570 agcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgatataataatatcaaatgcaagtcaacaacatcttttttatacattcat 18438668  T
Q  100 tcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
       |||||||||||||| ||||||||| ||| ||||| |||||| ||||| ||||||  |||||||||||||||    
T  18438669 atctcaagtaatgcatataacattatatcacatcatattcaacatcaacacatcttaaacagcttcacagatta 18438742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 26686921 - 26687095
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 97  Q
    |||||||||||||||||||| || |||||||||||||||||||   |||||||||||||| ||||||| | ||| ||| || |||||||   || | |      
T  26686921 gcagcttagttaaataacaa-caacaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattccatt 26687019  T
Q  98 attcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    || |||||||||||||| | ||||||||| |||  ||||||||||| ||||| ||||||  |||||||||||||||    
T  26687020 atacttcaagtaatgcacataacattatatcacaacataatcaacatcaacacatcttaaacagcttcacagatta 26687095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 43840966 - 43841140
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 97  Q
    |||||||||||||||||||| || |||||||| ||||||||||   |||||||||||||| ||||||| | ||| ||| || |||||||   || |||      
T  43840966 gcagcttagttaaataacaa-caacaacatagacagtatacaaaaacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattcaatt 43841064  T
Q  98 attcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    || |||||||||||||| | ||||||||| |||  ||||||||||| ||||| ||||||  |||||||||||||||    
T  43841065 atacttcaagtaatgcacataacattatatcacaacataatcaacatcaacacatcttaaacagcttcacagatta 43841140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 24153295 - 24153122
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaaca 98  Q
    |||||||||||||||||| |  | ||||||||| |||||||||  |||||||||||||| ||||||||| ||| ||| ||||||||||   || |||  |    
T  24153295 gcagcttagttaaataacgat-agcaacataggtagtatacaaaacagcatgacataataatatcaaatgcaagtcaacaacatcttaaatattcaatta 24153197  T
Q  99 ttcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    | |||||| ||||||| | ||||| ||| ||| |||||||||||| ||||| ||||||  |||||||||||||||    
T  24153196 tacttcaaataatgcacataacataatatcacatcataatcaacatcaacacatcttaaacagcttcacagatta 24153122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 275
Target Start/End: Complemental strand, 23077406 - 23077289
Alignment:
Q  158 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 257  Q
    |||||||||| ||||||   ||||||| ||||||||||||||| | || ||||||||||||||||| |||| |||||||||||||||||   |||||| |    
T  23077406 cagcttcacaaattacagtaaacttctcatataggtctcattactacctaagggtccatctctaatcaaattatgcgacacagatcgcaaaatcctcaat 23077307  T
Q  258 tgcactcagttctggaag 275  Q
    || | || ||||||||||    
T  23077306 tgaaatcggttctggaag 23077289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 159 - 275
Target Start/End: Complemental strand, 14878433 - 14878316
Alignment:
Q  159 agcttcacagattacaaataacttcttatataggtctcattattgcccaaggg-tccatctctaattaaatcatgcgacacagatcgcattttcctcact 257  Q
    ||||||||||||| ||  |||||||||||||| ||| ||||| | || | ||| |||||||||||| |||| ||||||||||||||||| | |||||| |    
T  14878433 agcttcacagattgcagttaacttcttatataagtcacattactacctagggggtccatctctaatcaaattatgcgacacagatcgcaatatcctcaat 14878334  T
Q  258 tgcactcagttctggaag 275  Q
     |||||| ||||||||||    
T  14878333 cgcactcggttctggaag 14878316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 23083448 - 23083275
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatac---aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 97  Q
    |||||||||||||||||| || | |||||||||||||||||   ||||| |||||||||| ||||||| | ||| ||| ||||||||||   || |||      
T  23083448 gcagcttagttaaataac-aatagcaacataggcagtatacaaaaacagaatgacataataatatcaattgcaagtcaacaacatcttaaatattcaatt 23083350  T
Q  98 attcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatt 171  Q
     | |||| ||||||||| | ||||||||| ||| |||||||||| | ||||| ||||||  ||||||||||||||    
T  23083349 ttacttctagtaatgcacataacattatatcacatcataatcaatatcaacacatcttaaacagcttcacagatt 23083275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 172
Target Start/End: Complemental strand, 40213805 - 40213634
Alignment:
Q  3 agcttagttaaataacaaacatcaacataggcagtataca---acagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacat 99  Q
    |||||||||||||||||| |||||||| || |||||||||   ||| ||||||||||| ||||||||| ||| ||| |||||||| |   |||||  |||    
T  40213805 agcttagttaaataacaa-catcaacacag-cagtatacataaacatcatgacataataatatcaaatgcaagtcaacaacatctcaattatacattcat 40213708  T
Q  100 tcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
      | |||||||||| || ||||||||| ||| |||||||||||| ||||| ||||||  |||||| ||||||||    
T  40213707 aatccaagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaacagctttacagatta 40213634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 171
Target Start/End: Complemental strand, 25476470 - 25476299
Alignment:
Q  3 agcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacat 99  Q
    |||||||||||| ||||| || ||||| ||| |||||||||   |||||||||||||| ||||||||| ||| ||| |||||||| | | |||||  |||    
T  25476470 agcttagttaaaaaacaa-cagcaacacaggtagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaagtatacattcat 25476372  T
Q  100 tcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatt 171  Q
      ||||||||||||  | ||||||||| ||| |||| |||| || ||||| ||||||  ||||||||||||||    
T  25476371 aattcaagtaatgcgcataacattatatcacatcattatcatcatcaacacatcttaaacagcttcacagatt 25476299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 42386444 - 42386619
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 97  Q
    |||| ||||||||||||||| || |||||||||||||||||||   |||||||||||||  ||||||||| ||| ||| |||||||| |   || ||  |    
T  42386444 gcagtttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacataacaatatcaaatgcaagtcaacaacatctcaaatattcattc 42386542  T
Q  98 attcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatctt-attcagcttcacagatta 172  Q
    ||  |||||| |||||||| ||||||||| ||| |||||||||||| ||| | ||||| |  |||||||||||||||    
T  42386543 ataattcaagcaatgcatataacattatatcacatcataatcaacatcaaaacatcttaaaacagcttcacagatta 42386619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 159 - 275
Target Start/End: Original strand, 15060483 - 15060599
Alignment:
Q  159 agcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcactt 258  Q
    ||||||||||||| ||  || | ||||||||||||| || || | || ||||||||||| ||||| || |||||||||||||||||||   |||| ||||    
T  15060483 agcttcacagattgcagttaccatcttatataggtcacaatactacctaagggtccatccctaatcaattcatgcgacacagatcgcaacatcctaactt 15060582  T
Q  259 gcactcagttctggaag 275  Q
    ||| ||||| |||||||    
T  15060583 gcaatcagtcctggaag 15060599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 11424846 - 11424676
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatac--aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaaca 98  Q
    |||||||||||||||||||| || |||||||||||||||||  |||||||||||||||  |||||||   |||   |||||||||| |   || ||  ||    
T  11424846 gcagcttagttaaataacaa-cagcaacataggcagtatacaaaacagcatgacataacaatatcaatagcaa---atcaacatctcaattatgcattca 11424751  T
Q  99 ttcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    |  |||||||||||| || ||||||||| ||| |||||| ||||  ||||| ||||||  |||||||||||||||    
T  11424750 taattcaagtaatgcgtataacattatatcacatcataaacaacttcaacacatcttaaacagcttcacagatta 11424676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 14572623 - 14572688
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatac--aacagcatgacataattatatcaa 65  Q
    |||||||||||||||||| |||| |||||||| ||||||||  |||||||||||||||| |||||||    
T  14572623 gcagcttagttaaataac-aacagcaacatagacagtatacaaaacagcatgacataataatatcaa 14572688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 12174346 - 12174308
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  12174346 gcagcttagttaaataacaaacagcaacataggcagtat 12174308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 15470958 - 15471043
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatct 84  Q
    ||||||||||||||||||| ||| ||||||||||||||| |||  || ||||| ||||  ||||| ||| ||| ||||||||||||    
T  15470958 gcagcttagttaaataacagacagcaacataggcagtatgcaaatcatcatgatataacaatatcgaatgcaagtcatcaacatct 15471043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 32307711 - 32307749
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  32307711 gcagcttagttaaataacaaacagcaacataggcagtat 32307749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 49668163 - 49668125
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  49668163 gcagcttagttaaataacaaacagcaacataggcagtat 49668125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 52523816 - 52523778
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  52523816 gcagcttagttaaataacaaacaacaacataggcagtat 52523778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 275
Target Start/End: Original strand, 11862981 - 11863098
Alignment:
Q  158 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 257  Q
    |||||||||||||| |||||||| ||||| ||||||| ||||| | || |||||||||   ||||| || | || ||| ||||||||||   |||| |||    
T  11862981 cagcttcacagatttcaaataacatcttaaataggtcacattaatacctaagggtccaatcctaatcaatttatacgaaacagatcgcaacatcctaact 11863080  T
Q  258 tgcactcagttctggaag 275  Q
    |||||||| || ||||||    
T  11863081 tgcactcaattttggaag 11863098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 275
Target Start/End: Original strand, 12496445 - 12496562
Alignment:
Q  158 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 257  Q
    |||||||||||||| ||  |||| ||||| ||||||| ||||| | || ||||||||| | ||||| || | |||||| ||||||||||   | || |||    
T  12496445 cagcttcacagatttcagttaacatcttaaataggtcacattactacctaagggtccaaccctaatcaacttatgcgaaacagatcgcaacatactaact 12496544  T
Q  258 tgcactcagttctggaag 275  Q
    |||| |||||||||||||    
T  12496545 tgcattcagttctggaag 12496562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 14234521 - 14234605
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatc 83  Q
    |||||||||||||||||||| || ||||||||||||||| |||  || ||||| ||||  ||||| ||| ||| |||||||||||    
T  14234521 gcagcttagttaaataacaagcagcaacataggcagtatgcaaatcatcatgatataacaatatcgaatgcaagtcatcaacatc 14234605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 243
Target Start/End: Original strand, 15051707 - 15051791
Alignment:
Q  159 agcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatc 243  Q
    ||||||||| ||| ||  |||| ||||||||||||| || || | || ||||||||||| ||||| || ||||||||||||||||    
T  15051707 agcttcacaaattgcagttaacatcttatataggtcacaatactacctaagggtccatccctaatcaattcatgcgacacagatc 15051791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 17672657 - 17672737
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaac 80  Q
    |||||||||||||||||||| || |||||||| ||||||||||   |||||||||||||| ||||||||| ||| ||| ||||    
T  17672657 gcagcttagttaaataacaa-caacaacatag-cagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaac 17672737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 9512954 - 9512992
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat 39  Q
    |||||||||||||| |||||||| |||||||||||||||    
T  9512954 gcagcttagttaaacaacaaacagcaacataggcagtat 9512992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 9520929 - 9520967
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat 39  Q
    |||||||||||||| |||||||| |||||||||||||||    
T  9520929 gcagcttagttaaacaacaaacagcaacataggcagtat 9520967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 13210414 - 13210376
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat 39  Q
    ||||||||||||||||||||| | |||||||||||||||    
T  13210414 gcagcttagttaaataacaaatagcaacataggcagtat 13210376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 16097362 - 16097396
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggca 35  Q
    ||||||||||||||||||||||| |||||||||||    
T  16097362 gcagcttagttaaataacaaacaacaacataggca 16097396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 172
Target Start/End: Original strand, 16796685 - 16796755
Alignment:
Q  103 tcaagtaatgcat-aaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    ||||||||||||| |||||||||| ||| |||||||||| ||||||| ||||||  || ||||||| ||||    
T  16796685 tcaagtaatgcataaaacattatatcacatcataatcaaaaacaacacatcttaaacaacttcacatatta 16796755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 36166629 - 36166712
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatct 84  Q
    |||||||||||||||||||| || | ||| || ||||||||||  |||||||||||||| ||||||||| ||| ||| ||||||||    
T  36166629 gcagcttagttaaataacaa-cagcgacacag-cagtatacaaaacagcatgacataataatatcaaatgcaagtcaacaacatct 36166712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 9707738 - 9707658
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaac 80  Q
    |||||||||||||||||||| || ||||| || ||||||||||   |||||||||||||| ||||||||| ||| ||| ||||    
T  9707738 gcagcttagttaaataacaa-cagcaacacag-cagtatacaaaaacagcatgacataataatatcaaatacaagtcaacaac 9707658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 243
Target Start/End: Original strand, 16909941 - 16910025
Alignment:
Q  159 agcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatc 243  Q
    ||||||||||||| ||  |||| |||| |||||||| ||||| | || ||||||||||| ||||| || ||| || |||||||||    
T  16909941 agcttcacagattgcagttaacatcttgtataggtcacattactacctaagggtccatccctaatcaattcaagcaacacagatc 16910025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 29172714 - 29172634
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaac 80  Q
    |||||||||||||||||||| || ||||| || ||||||||||   |||||||||||||| ||||||||| ||| ||| ||||    
T  29172714 gcagcttagttaaataacaa-cagcaacacag-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaac 29172634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1124 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold1124
Description:

Target: scaffold1124; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 65 - 275
Target Start/End: Original strand, 1975 - 2184
Alignment:
Q  65 aattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttc 164  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||| || |||||  ||||   ||||| || || ||||||||    
T  1975 aattcaattcatcaacatcttatgtatacaattattcttcaagtaatgcataaacattataatacatcatatccaacgcaaacatctcata-tcagcttc 2073  T
Q  165 acagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcacttgcactc 264  Q
    ||||||| ||  |||||||||||||||||||||||| | || ||||||||||| ||||| || ||| || |||||||||  |   | |||||||||||||    
T  2074 acagattgcagttaacttcttatataggtctcattactacctaagggtccatccctaatcaattcaagcaacacagatcataacattctcacttgcactc 2173  T
Q  265 agttctggaag 275  Q
    |||||| ||||    
T  2174 agttctcgaag 2184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 65 - 275
Target Start/End: Complemental strand, 21826 - 21617
Alignment:
Q  65 aattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttc 164  Q
    |||||||||||||||||||||||| ||||||  | ||||||||||||||||||||||||||| || || |||||||||  ||||| || ||  |||||||    
T  21826 aattcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcttaatcaacacaaacatctcata-acagcttc 21728  T
Q  165 acagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcacttgcactc 264  Q
    ||||||| ||  |||| ||||||||||||||||||| | || ||||||||||| ||||  || ||| || ||||||||| ||   | |||||||||||||    
T  21727 acagattgcagttaacatcttatataggtctcattactacctaagggtccatccctaaccaattcaagcaacacagatcacaacattctcacttgcactc 21628  T
Q  265 agttctggaag 275  Q
    |||||||||||    
T  21627 agttctggaag 21617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 65 - 275
Target Start/End: Complemental strand, 29718 - 29509
Alignment:
Q  65 aattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttc 164  Q
    |||||||||||||||||||||||| ||||||  | ||||||||||||||||||||||||||| || || |||||||||  ||||| || ||  |||||||    
T  29718 aattcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcttaatcaacacaaacatctcata-acagcttc 29620  T
Q  165 acagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcacttgcactc 264  Q
    ||||||| ||  |||| ||||||||||||||||||| | || ||||||||||| ||||  || ||| || ||||||||| ||   | |||||||||||||    
T  29619 acagattgcagttaacatcttatataggtctcattactacctaagggtccatccctaaccaattcaagcaacacagatcacaacattctcacttgcactc 29520  T
Q  265 agttctggaag 275  Q
    |||||||||||    
T  29519 agttctggaag 29509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 82; Significance: 9e-39; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 13245 - 13419
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 97  Q
    |||||||||||||||||||| || |||||||||||||||||||   |||||||||||||| ||||||| | ||||||||||||||||||   || ||||     
T  13245 gcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaat 13343  T
Q  98 attcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    ||||||||||||||||||| ||||||||| ||| |||||||||||| ||||| ||||||  |||||||||| ||||    
T  13344 attcttcaagtaatgcatataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacaaatta 13419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 102 - 275
Target Start/End: Original strand, 20117 - 20291
Alignment:
Q  102 ttcaagtaatgca--taaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcatt 199  Q
    |||||||||||||  ||||||||||| ||| ||||| ||||||  ||||| || ||  ||||||||||| || ||  |||||||||||||||||||||||    
T  20117 ttcaagtaatgcaattaaacattatatcacatcatattcaacactaacatctcataa-cagcttcacaggttgcagttaacttcttatataggtctcatt 20215  T
Q  200 attgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcacttgcactcagttctggaag 275  Q
    | | |||||||||||||| ||||| ||||||||||||||||||  |||| ||||||||||||||||||||||||||    
T  20216 actacccaagggtccatccctaatcaaatcatgcgacacagattacattatcctcacttgcactcagttctggaag 20291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 102 - 275
Target Start/End: Original strand, 36592 - 36766
Alignment:
Q  102 ttcaagtaatgca--taaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcatt 199  Q
    |||||||||||||  ||||||||||| ||| ||||| ||||||  ||||| || ||  |||||||||||||| ||  |||||||||| ||||||||||||    
T  36592 ttcaagtaatgcaattaaacattatatcacatcatattcaacactaacatctcataa-cagcttcacagattgcagttaacttcttaaataggtctcatt 36690  T
Q  200 attgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcacttgcactcagttctggaag 275  Q
    | | ||||||||||| |||||||  |||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  36691 actacccaagggtccttctctaaacaaatcatgcgacacagatcgtattttcctcacttgcactcagttctagaag 36766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 65 - 275
Target Start/End: Original strand, 12857 - 13066
Alignment:
Q  65 aattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttc 164  Q
    |||||||||||||||||||||||| ||||||  | ||||||||||||||||||||||||||| || |||||||||||  |||||| || |||| ||||||    
T  12857 aattcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcataatcaactccaacatctcatatt-agcttc 12955  T
Q  165 acagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcacttgcactc 264  Q
    ||| ||| ||  |||||||||||||||||||||||| | || |||||||||||  |||| || ||| || || || ||| ||   | |||| ||||||||    
T  12956 acaaattgcagttaacttcttatataggtctcattactacctaagggtccatccataatcaattcaagcaactcatatcacaacattctcatttgcactc 13055  T
Q  265 agttctggaag 275  Q
    |||||||||||    
T  13056 agttctggaag 13066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1842 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold1842
Description:

Target: scaffold1842; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 1135 - 949
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaaca---gcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 97  Q
    |||||||||||||||||||| || ||||||||||||||||||| |   |||||||||||| ||||||| | ||||||||||||||||||   || ||||     
T  1135 gcagcttagttaaataacaa-caacaacataggcagtatacaaaaatagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaat 1037  T
Q  98 attcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttctt 185  Q
    ||| |||||||||||||||||||||||| ||| ||||||||||| | |||| ||||||  |||||||| |||||| || |||| ||||    
T  1036 attattcaagtaatgcataaacattatatcacatcataatcaaccaaaacacatcttaaacagcttcaaagattataattaacctctt 949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 4883 - 5057
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 97  Q
    |||| ||||||||||||||| || |||||||||||||||||||   |||||||||||||| ||||||||| ||||||| |||||||||| | || ||||     
T  4883 gcagattagttaaataacaa-cagcaacataggcagtatacaaaatcagcatgacataataatatcaaatgcaattcaacaacatcttaagtattcaaat 4981  T
Q  98 attcttcaagtaatgcataaa-cattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    | |  |||||||||||||||| ||||||| ||| |||||||||||||||||| ||||||  |||||||||||||||    
T  4982 aattctcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacagatta 5057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 158 - 275
Target Start/End: Complemental strand, 8885 - 8768
Alignment:
Q  158 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 257  Q
    |||||||||||||||||  |||||||||||||||||||||||| | ||||||||||||||||||||  ||| ||||||||||| ||||| | ||||||||    
T  8885 cagcttcacagattacagttaacttcttatataggtctcattactacccaagggtccatctctaatcgaattatgcgacacaggtcgcaatatcctcact 8786  T
Q  258 tgcactcagttctggaag 275  Q
    ||||||||||||||||||    
T  8785 tgcactcagttctggaag 8768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 168065 - 167879
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaaca---gcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 97  Q
    |||||||||||||||||||| || ||||||||||||||||||| |   |||||||||||| ||||||| | ||||||||||||||||||   || ||||     
T  168065 gcagcttagttaaataacaa-caacaacataggcagtatacaaaaatagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaat 167967  T
Q  98 attcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttctt 185  Q
    ||| |||||||||||||||||||||||| ||| ||||||||||| | |||| ||||||  |||||||| |||||| || |||| ||||    
T  167966 attattcaagtaatgcataaacattatatcacatcataatcaaccaaaacacatcttaaacagcttcaaagattataattaacctctt 167879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 51947 - 52121
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 97  Q
    |||||||||||||||||||| || ||||||||||| |||||||   |||||||||||||| ||||||| | ||| ||| || |||||||   || |||      
T  51947 gcagcttagttaaataacaa-cagcaacataggcaatatacaaaaacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattcaatt 52045  T
Q  98 attcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    || |||||||||||||| | ||||||||| |||  ||||||| ||| ||||| ||||||  |||||||||||||||    
T  52046 atacttcaagtaatgcacataacattatatcacaacataatctacatcaacacatcttaaacagcttcacagatta 52121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 158 - 275
Target Start/End: Original strand, 18431 - 18548
Alignment:
Q  158 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 257  Q
    |||||||||||||| ||  |||||||||||||||||| ||||| | |||||||||||||||||||| |||| |||||||||| |||||| | ||||||||    
T  18431 cagcttcacagattgcagttaacttcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacacatatcgcaatatcctcact 18530  T
Q  258 tgcactcagttctggaag 275  Q
    ||||||||||||||||||    
T  18531 tgcactcagttctggaag 18548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 72; Significance: 8e-33; HSPs: 2)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 3 - 172
Target Start/End: Original strand, 3506 - 3678
Alignment:
Q  3 agcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacat 99  Q
    |||||||||||||||| || | |||||||||||||||||||   |||||||||||||| ||||||| | ||||||||||||||||||   || |||| ||    
T  3506 agcttagttaaataactaa-agcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaatat 3604  T
Q  100 tcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    ||||||||||||||| | ||||||||| ||| |||||||||||| ||||| ||||||  |||||||| ||||||    
T  3605 tcttcaagtaatgcaaataacattatatcacatcataatcaacatcaacacatcttaaacagcttcatagatta 3678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 377 - 543
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaaca--gcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaaca 98  Q
    ||||||||||||||||||||  || |||||||||||||||||| |  ||||||| |||| ||||||| |  || ||| ||||||||||   || | |  |    
T  377 gcagcttagttaaataacaacaat-aacataggcagtatacaaaatagcatgacgtaataatatcaattggaagtcaacaacatcttaaatattcgatta 475  T
Q  99 ttcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttca 165  Q
    | |||||||||||||| | ||||||||| ||| |||||||||||| ||||| ||||||  ||||||||    
T  476 tacttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttca 543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 71; Significance: 3e-32; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 1550 - 1648
Alignment:
Q  177 taacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcacttgcactcagttctggaag 275  Q
    ||||||||||||||||||||| || | |||||||||||||||||||| |||| ||||||||||||||||| | ||||||||||||||||||||||||||    
T  1550 taacttcttatataggtctcaatactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctggaag 1648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 15695 - 15737
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa 43  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  15695 gcagcttagttaaataacaaacagcaacataggcagtatacaa 15737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 71; Significance: 3e-32; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 65702 - 65604
Alignment:
Q  177 taacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcacttgcactcagttctggaag 275  Q
    |||||||||||||||||||||||| | |||||||||||||||||||| |||| |||||||| |||||||| | ||||||||||||||||||||||||||    
T  65702 taacttcttatataggtctcattactacccaagggtccatctctaatcaaattatgcgacaaagatcgcaatatcctcacttgcactcagttctggaag 65604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 86
Target Start/End: Original strand, 128827 - 128871
Alignment:
Q  42 aacagcatgacataattatatcaaattcaattcatcaacatctta 86  Q
    |||||||||||||||| ||||||||| ||| ||| ||||||||||    
T  128827 aacagcatgacataataatatcaaatgcaagtcaacaacatctta 128871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 1885 - 2059
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 97  Q
    |||||||||||||||||||| || |||||||| ||||||||||   || ||||||||||| ||||||| | ||||||||||||||||||   || ||||     
T  1885 gcagcttagttaaataacaa-cagcaacatagacagtatacaaaaacaacatgacataataatatcaattgcaattcatcaacatcttaaatattcaaat 1983  T
Q  98 attcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    ||||||||||||||||| | ||||||||| ||| |||||||||||| ||||| ||||||   ||||||||||||||    
T  1984 attcttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaatagcttcacagatta 2059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 69; Significance: 5e-31; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 24390 - 24214
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa----cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 96  Q
    |||||||||||||||||||| || |||||||||||||||||||    |||||||||||||  ||||||| | ||||||||||||||||||   || ||||    
T  24390 gcagcttagttaaataacaa-cagcaacataggcagtatacaaaacacagcatgacataaaaatatcaattgcaattcatcaacatcttaaatattcaaa 24292  T
Q  97 cattcttcaagtaatgcata-aacattataacacttcataa-tcaacaacaacatatcttattcagcttcacagatta 172  Q
     ||||||||||||||||| | ||||||||| ||| |||||| |||||| ||||| ||||||  |||||||||||||||    
T  24291 tattcttcaagtaatgcacataacattatatcacatcataattcaacatcaacacatcttaaacagcttcacagatta 24214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 275
Target Start/End: Complemental strand, 34838 - 34721
Alignment:
Q  158 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 257  Q
    |||||||||||||| ||  |||| ||||||||||||| ||||| | |||||||||||||||||||  || | ||| |||| || ||||| | | ||||||    
T  34838 cagcttcacagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaaacaagttatgtgacaaaggtcgcaatgttctcact 34739  T
Q  258 tgcactcagttctggaag 275  Q
    ||||||||||||||||||    
T  34738 tgcactcagttctggaag 34721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 6211 - 6039
Alignment:
Q  1 gcagcttagttaaataacaa--acatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaa 95  Q
    ||||||||||||||||||||  ||| ||||||||| |||||||||   ||||||||||| || ||||||| | ||||||||||||||||||   || |||    
T  6211 gcagcttagttaaataacaacaacaacaacataggtagtatacaaaaacagcatgacatgataatatcaattgcaattcatcaacatcttaaatattcaa 6112  T
Q  96 acattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcaca 167  Q
    | ||||||||||||||||| | ||||||||| ||| |||||||||||| ||||| ||||||  ||||||||||    
T  6111 atattcttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcaca 6039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1895 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold1895
Description:

Target: scaffold1895; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 158 - 275
Target Start/End: Complemental strand, 1155 - 1038
Alignment:
Q  158 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 257  Q
    ||||||||| |||| ||  ||||||||||||||||||  |||| | ||||||| |||||||||||| |||| ||||||||||||||||| | ||||||||    
T  1155 cagcttcactgattgcagttaacttcttatataggtcatattactacccaaggatccatctctaatcaaattatgcgacacagatcgcaatatcctcact 1056  T
Q  258 tgcactcagttctggaag 275  Q
    ||||||||||||||||||    
T  1055 tgcactcagttctggaag 1038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 158 - 275
Target Start/End: Original strand, 773 - 890
Alignment:
Q  158 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 257  Q
    |||||||||||||| ||  |||||||||| ||||||||||||| | || ||||||||||||||||| |||| ||||||||||||||||| | |||||| |    
T  773 cagcttcacagattgcagttaacttcttaaataggtctcattactaccgaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcatt 872  T
Q  258 tgcactcagttctggaag 275  Q
    | ||||||||||||||||    
T  873 tacactcagttctggaag 890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 10628 - 10543
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatct 84  Q
    ||||||||||||||||||||||| ||||||||||||||| |||  || ||||| ||||  ||||| ||| ||| ||||||||||||    
T  10628 gcagcttagttaaataacaaacagcaacataggcagtatgcaaatcatcatgatataacaatatcgaatgcaagtcatcaacatct 10543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 1986 - 2160
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 97  Q
    ||||||||||||| |||||| || | |||||||||||||||||   || ||||||||||| ||||||| | ||||||| ||||||||||   || |||||    
T  1986 gcagcttagttaattaacaa-cagcgacataggcagtatacaaaatcaacatgacataatgatatcaattgcaattcaacaacatcttaaatattcaaac 2084  T
Q  98 attcttcaagtaatgcat-aaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    ||| |||||||||||||| |||||||||| | | |||||||||||||||||||||| ||| |||||| ||| ||||    
T  2085 attattcaagtaatgcataaaacattatatctcatcataatcaacaacaacatatcatatacagctttacatatta 2160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 158 - 275
Target Start/End: Complemental strand, 15597 - 15480
Alignment:
Q  158 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 257  Q
    |||||||||||||| ||  |||||||||||||||||||||||| | |||||||||||||||||||| |||| | |||||||||||| || | ||||||||    
T  15597 cagcttcacagattgcagttaacttcttatataggtctcattactacccaagggtccatctctaatcaaattaagcgacacagatcacaatatcctcact 15498  T
Q  258 tgcactcagttctggaag 275  Q
    |||||| |||||| ||||    
T  15497 tgcactaagttctagaag 15480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 158 - 275
Target Start/End: Complemental strand, 48388 - 48271
Alignment:
Q  158 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 257  Q
    |||||||||| ||| ||  |||||||||||||||||||||||| | |||||||||||||||||||| |||| ||| ||||||||||||| | | || |||    
T  48388 cagcttcacatattgcatttaacttcttatataggtctcattactacccaagggtccatctctaatcaaattatgtgacacagatcgcaatattcttact 48289  T
Q  258 tgcactcagttctggaag 275  Q
    ||||||||||||||||||    
T  48288 tgcactcagttctggaag 48271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 19298 - 19336
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  19298 gcagcttagttaaataacaaacagcaacataggcagtat 19336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 66; Significance: 3e-29; HSPs: 6)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 158 - 275
Target Start/End: Complemental strand, 38407 - 38290
Alignment:
Q  158 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 257  Q
    |||||||||||||| ||| |||||||||||||||||| ||||| | |||||||||||| ||||||| |||| |||||||||||||||||   | ||||||    
T  38407 cagcttcacagattgcaactaacttcttatataggtcacattactacccaagggtccaactctaatcaaattatgcgacacagatcgcaaagttctcact 38308  T
Q  258 tgcactcagttctggaag 275  Q
    |||||| |||||||||||    
T  38307 tgcacttagttctggaag 38290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 158 - 275
Target Start/End: Complemental strand, 23594 - 23478
Alignment:
Q  158 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 257  Q
    |||||||||||||| ||| ||||||||| |||||||| ||||| | |||||||||||| |  |||| |||| |||||||| ||||||||   | ||||||    
T  23594 cagcttcacagattgcaactaacttctt-tataggtcacattactacccaagggtccaacattaatcaaattatgcgacaaagatcgcaaagttctcact 23496  T
Q  258 tgcactcagttctggaag 275  Q
    ||||||||||||| ||||    
T  23495 tgcactcagttctagaag 23478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 100408 - 100493
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatct 84  Q
    ||||||||||||||||||||||| ||||||||||||||| |||  || ||||| ||||| ||||| ||| ||| ||| ||||||||    
T  100408 gcagcttagttaaataacaaacagcaacataggcagtatgcaaatcatcatgatataataatatcgaatgcaaatcaacaacatct 100493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 119909 - 119947
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  119909 gcagcttagttaaataacaaacagcaacataggcagtat 119947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 101533 - 101571
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat 39  Q
    |||||||||||||| |||||||| |||||||||||||||    
T  101533 gcagcttagttaaacaacaaacaacaacataggcagtat 101571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 40261 - 40224
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagta 38  Q
    ||||||||||||||||| ||||| ||||||||||||||    
T  40261 gcagcttagttaaataataaacagcaacataggcagta 40224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 27 - 180
Target Start/End: Original strand, 6669 - 6826
Alignment:
Q  27 acataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaa-catt 122  Q
    |||||||||||||||||   || ||||||||||| |||||||   ||||||| ||||||||||   || |||||||| ||||||||||||||||| | ||    
T  6669 acataggcagtatacaaaatcaacatgacataatgatatcaatagcaattcaacaacatcttaaatattcaaacattattcaagtaatgcataaaacgtt 6768  T
Q  123 ataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataac 180  Q
    ||| ||| |||||||||||||||||||||| ||| |||||| |||||||| |||||||    
T  6769 atatcacatcataatcaacaacaacatatcatatacagctttacagattataaataac 6826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 39511 - 39684
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaaca 98  Q
    |||||||||||||||||||| || |||||||||||||||||||  |||||||||||||| ||||||||| ||| ||| |||||||| |   |||||  ||    
T  39511 gcagcttagttaaataacaa-caacaacataggcagtatacaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaaatatacattca 39609  T
Q  99 ttcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    |  ||||||||||||| | ||||||||| ||| |||||||||||| ||||| ||||||  |||||||| ||||||    
T  39610 taattcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcatagatta 39684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 75301 - 75128
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaaca 98  Q
    |||||||||||||||||||| || |||||||||||||||||||  |||||||||||||| ||||||||| ||| ||| |||||||| |   |||||  ||    
T  75301 gcagcttagttaaataacaa-caacaacataggcagtatacaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaaatatacattca 75203  T
Q  99 ttcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    |  ||||||||||||| | ||||||||| ||| |||||||||||| ||||| ||||||  |||||||| ||||||    
T  75202 taattcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcatagatta 75128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 62; Significance: 8e-27; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 158 - 275
Target Start/End: Complemental strand, 18381 - 18264
Alignment:
Q  158 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 257  Q
    ||||||||||||||  |  |||||||||| ||||||| ||||| | |||| ||||||||||||||| |||| |||||||||| |||||| | ||||||||    
T  18381 cagcttcacagattgtagttaacttcttaaataggtcacattactacccaggggtccatctctaatcaaattatgcgacacaaatcgcaatatcctcact 18282  T
Q  258 tgcactcagttctggaag 275  Q
    ||||||||||||||||||    
T  18281 tgcactcagttctggaag 18264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 62; Significance: 8e-27; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 158 - 275
Target Start/End: Original strand, 3933 - 4049
Alignment:
Q  158 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 257  Q
    |||||||||||||| ||| |||  ||||||||||||| ||||| | |||||||||||||||||||| |||| |||||| ||||||||||   ||||||||    
T  3933 cagcttcacagattgcaattaatatcttatataggtcacattactacccaagggtccatctctaatcaaat-atgcgatacagatcgcaacatcctcact 4031  T
Q  258 tgcactcagttctggaag 275  Q
    ||||||||||||||||||    
T  4032 tgcactcagttctggaag 4049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 158 - 275
Target Start/End: Original strand, 8364 - 8480
Alignment:
Q  158 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 257  Q
    |||||||||||||| ||| |||  ||||||||||||| ||||| | |||||||||||||||||||| |||| |||||| ||||||||||   ||||||||    
T  8364 cagcttcacagattgcaattaatatcttatataggtcacattactacccaagggtccatctctaatcaaat-atgcgatacagatcgcaacatcctcact 8462  T
Q  258 tgcactcagttctggaag 275  Q
    ||||||||||||||||||    
T  8463 tgcactcagttctggaag 8480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 3237 - 3068
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaaca 98  Q
    |||||||||||||||||||| || |||||||||||||||||||  || ||||||||||| ||||||||| ||| ||| |||||||| |   |||||  ||    
T  3237 gcagcttagttaaataacaa-cagcaacataggcagtatacaaaacaacatgacataataatatcaaatgcaagtcaacaacatctcaaatatacattca 3139  T
Q  99 ttcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacag 168  Q
    |  ||||||||||||||| ||||||||| ||| |||||||||||| ||||  ||||||  |||||||||||    
T  3138 taattcaagtaatgcatataacattatatcacatcataatcaacatcaacgcatcttaaacagcttcacag 3068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 32976 - 33149
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaaca 98  Q
    |||||||| |||||||||||  | |||||||||||||||||||  |||||||||||||| ||||||||| ||| | | ||||||||||   || |||  |    
T  32976 gcagcttaattaaataacaat-agcaacataggcagtatacaaaacagcatgacataataatatcaaatgcaagttaacaacatcttaaatattcaatta 33074  T
Q  99 ttcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    | |||||||||||||| | ||||||||| ||| |||||||||||| ||||| ||||||  |||||||||||||||    
T  33075 tacttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagatta 33149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 38795 - 38968
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaaca 98  Q
    |||||||| |||||||||||  | |||||||||||||||||||  |||||||||||||| ||||||||| ||| | | ||||||||||   || |||  |    
T  38795 gcagcttaattaaataacaat-agcaacataggcagtatacaaaacagcatgacataataatatcaaatgcaaataaacaacatcttaaatattcaatta 38893  T
Q  99 ttcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    | |||||||||||||| | ||||||||| ||| |||||||||||| ||||| ||||||  |||||||||||||||    
T  38894 tacttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagatta 38968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 105 - 275
Target Start/End: Complemental strand, 16330 - 16160
Alignment:
Q  105 aagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcattattg 203  Q
    |||||||||| | ||||||||| ||| ||||| ||||||  ||||| || ||  |||||||||||||| ||  ||||||||||||||||||  |||| |     
T  16330 aagtaatgcacataacattatatcacatcatattcaacattaacatttcataa-cagcttcacagattgcagttaacttcttatataggtcatattacta 16232  T
Q  204 cccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcacttgcactcagttctggaag 275  Q
    |||||||||||| ||||||| |||| |||||||||||||||||    ||||||||||||||| |||||||||    
T  16231 cccaagggtccacctctaatcaaattatgcgacacagatcgcaacaacctcacttgcactcaattctggaag 16160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0908 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0908
Description:

Target: scaffold0908; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 3273 - 3103
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 97  Q
    |||||||||||||||||||| || |||||||||||||||||||   |||||||| ||||| |||||||||  |||||| |||||||| | | |||||  |    
T  3273 gcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgatataataatatcaaatgtaattcaacaacatctcaagtatacattc 3175  T
Q  98 attcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacag 168  Q
    ||  |||||||||||| |  ||||||||| ||| |||||||||||| ||||| ||||||  |||||||||||    
T  3174 ataattcaagtaatgcgtttaacattatatcacatcataatcaacatcaacacatcttaaacagcttcacag 3103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 26152 - 25978
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 97  Q
    |||||||||||||||||||| || |||||||||||||||||||   |||||||||||||| |||||||||  |||||| |||| ||| | | |||||  |    
T  26152 gcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacataataatatcaaatgtaattcaacaacgtctcaagtatacattc 26054  T
Q  98 attcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    ||  |||||||||||| |  ||||||||| ||| |||||||||||| ||||| ||||||  |||||||| ||||||    
T  26053 ataattcaagtaatgcgtttaacattatatcacatcataatcaacatcaacacatcttaaacagcttcatagatta 25978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 44794 - 44709
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatct 84  Q
    |||||||||||||||||||| || ||||| |||||||||||||   |||||||||||||| ||||||||| ||| ||| ||||||||    
T  44794 gcagcttagttaaataacaa-cagcaacacaggcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacatct 44709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 58; Significance: 2e-24; HSPs: 3)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 158 - 275
Target Start/End: Original strand, 14863 - 14980
Alignment:
Q  158 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 257  Q
    |||||||||||||| ||  ||||||||| ||||||| |||||| | |||| | ||||||||||||| |||| ||||||||||||| ||| | ||||||||    
T  14863 cagcttcacagattgcagttaacttcttgtataggtttcattactacccaggagtccatctctaatcaaattatgcgacacagattgcagtatcctcact 14962  T
Q  258 tgcactcagttctggaag 275  Q
     |||||||||||||||||    
T  14963 ggcactcagttctggaag 14980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 158 - 275
Target Start/End: Original strand, 23878 - 23995
Alignment:
Q  158 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 257  Q
    |||||||||||||| ||  ||||||||| ||||||| |||||| | |||| | |||||||||| || |||| ||||||||||||| ||| | ||||||||    
T  23878 cagcttcacagattgcagttaacttcttgtataggtttcattactacccaggtgtccatctcttatcaaattatgcgacacagattgcagtatcctcact 23977  T
Q  258 tgcactcagttctggaag 275  Q
     |||||||||||||||||    
T  23978 ggcactcagttctggaag 23995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 158 - 275
Target Start/End: Original strand, 39302 - 39419
Alignment:
Q  158 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 257  Q
    |||||||||||||| ||  ||||||||| ||||||| |||||| | |||| | |||||||||| || |||| ||||||||||||| ||| | ||||||||    
T  39302 cagcttcacagattgcagttaacttcttgtataggtttcattactacccaggtgtccatctcttatcaaattatgcgacacagattgcagtatcctcact 39401  T
Q  258 tgcactcagttctggaag 275  Q
     |||||||||||||||||    
T  39402 ggcactcagttctggaag 39419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 3 - 185
Target Start/End: Original strand, 20946 - 21132
Alignment:
Q  3 agcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacat 99  Q
    ||||||||||| |||||| || ||||||||||| ||| |||   || ||||||||||| ||||||| | ||||||| |||||||||||  || ||||  |    
T  20946 agcttagttaattaacaatcagcaacataggcaatatgcaaaaacaacatgacataataatatcaattgcaattcaacaacatcttatatattcaaatgt 21045  T
Q  100 tcttcaagtaatgcat-aaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttctt 185  Q
    ||| |||||||||||| |||||||||| ||| ||||||||| || ||||| ||||||  ||||||||||| ||| || |||| ||||    
T  21046 tctacaagtaatgcataaaacattatatcacatcataatcagcatcaacacatcttaaacagcttcacaggttataattaacatctt 21132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 57; Significance: 7e-24; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 340034 - 339863
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaaca 98  Q
    |||||||||||||||||||  || |||||||||||||||||||  || ||||||||||| ||||||||| ||| ||| |||||||| | | |||||  ||    
T  340034 gcagcttagttaaataaca--caacaacataggcagtatacaaaacaacatgacataataatatcaaat-caagtcaacaacatctcaagtatacattca 339938  T
Q  99 ttcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    |  |||||||||||  || ||||||||| ||| |||||||||||| ||||| ||||||  |||||||||||||||    
T  339937 taattcaagtaatgtgtataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagatta 339863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 71353 - 71419
Alignment:
Q  20 aacatcaacataggcagtatacaa-cagcatgacataattatatcaaattcaattcatcaacatctt 85  Q
    |||| |||||||||||| |||||| ||||||||||||||  |||||| ||||||||| |||||||||    
T  71353 aacagcaacataggcagcatacaaacagcatgacataatattatcaatttcaattcaacaacatctt 71419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 158 - 275
Target Start/End: Original strand, 6294 - 6411
Alignment:
Q  158 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 257  Q
    |||||||||||||| ||  ||||||||| ||||||| || ||| | |||| || |||||||||||| |||| |||||||||||||||||   ||||||||    
T  6294 cagcttcacagattgcagttaacttcttgtataggtttctttactacccagggatccatctctaatcaaattatgcgacacagatcgcaacatcctcact 6393  T
Q  258 tgcactcagttctggaag 275  Q
    ||||| ||||||||||||    
T  6394 tgcacacagttctggaag 6411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 22917 - 23098
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 97  Q
    |||||||||||||||||||| || ||||| |  ||||||||||   |||||||||||||| ||||||||| ||| ||| ||||||||||   || |||      
T  22917 gcagcttagttaaataacaa-cagcaacacac-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacatcttaaatattcaatt 23014  T
Q  98 attcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataac 180  Q
    || |||||||||||||| | ||||||||| ||| || ||||||||| ||||| ||||||  ||||||||||||||| |||||||    
T  23015 atacttcaagtaatgcacataacattatatcacatcgtaatcaacatcaacacatcttaaacagcttcacagattataaataac 23098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 17304 - 17128
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa-----cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaa 95  Q
    |||||||||||||||||||| || |||||||||||||||||||     |||||||||||||| ||||||||| ||| ||| |||||||| | | |||||     
T  17304 gcagcttagttaaataacaa-cagcaacataggcagtatacaaaaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaagtatacat 17206  T
Q  96 acattcttcaagtaatgc-ataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
     |||  ||||||||||||  | ||||||||| ||| |||||||||||| |||||  |||||  |||||| ||||||||    
T  17205 tcataattcaagtaatgcgtttaacattatatcacatcataatcaacatcaacacgtcttaaacagctttacagatta 17128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 158 - 275
Target Start/End: Complemental strand, 14005 - 13888
Alignment:
Q  158 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 257  Q
    |||||||||||||| ||  |||| || ||||||||||   ||| | ||||||||||| ||||||| ||| | ||||||||||| |||||   | ||||||    
T  14005 cagcttcacagatttcagttaacatcctatataggtcattttactacccaagggtccttctctaaataagttatgcgacacaggtcgcaaagttctcact 13906  T
Q  258 tgcactcagttctggaag 275  Q
    ||||||||||||||||||    
T  13905 tgcactcagttctggaag 13888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 158 - 275
Target Start/End: Complemental strand, 46655 - 46538
Alignment:
Q  158 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 257  Q
    |||||||||||||| ||  |||||||||||||||||| ||||| | || ||| ||||||| ||||| || | |||||||||||||||||   |||| |||    
T  46655 cagcttcacagattgcagttaacttcttatataggtcacattactacctaagagtccatccctaatcaatttatgcgacacagatcgcaacatcctaact 46556  T
Q  258 tgcactcagttctggaag 275  Q
    ||||||||||||||||||    
T  46555 tgcactcagttctggaag 46538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 208 - 275
Target Start/End: Original strand, 15642 - 15709
Alignment:
Q  208 agggtccatctctaattaaatcatgcgacacagatcgcattttcctcacttgcactcagttctggaag 275  Q
    |||||||||||||||| |||| ||||||||||||||||| | ||||||||||||||||||||||||||    
T  15642 agggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctggaag 15709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 51; Significance: 3e-20; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 172
Target Start/End: Original strand, 4544 - 4715
Alignment:
Q  4 gcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacatt 100  Q
    ||||||||||||||||| || ||||| | |||||||| ||   |||||||||||||| ||||||||| ||| ||| |||||||| |   |||||  |||     
T  4544 gcttagttaaataacaa-cagcaacacaagcagtatataaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaaatatacattcata 4642  T
Q  101 cttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
     |||||||||||| || ||||||||| ||| |||||||||||| ||||| ||||||  |||||||||||||||    
T  4643 attcaagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagatta 4715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 172
Target Start/End: Original strand, 12126 - 12297
Alignment:
Q  4 gcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacatt 100  Q
    ||||||||||||||||| || ||||| | |||||||| ||   |||||||||||||| ||||||||| ||| ||| |||||||| |   |||||  |||     
T  12126 gcttagttaaataacaa-cagcaacacaagcagtatataaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaaatatacattcata 12224  T
Q  101 cttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
     |||||||||||| || ||||||||| ||| |||||||||||| ||||| ||||||  |||||||||||||||    
T  12225 attcaagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagatta 12297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 172
Target Start/End: Original strand, 22078 - 22249
Alignment:
Q  4 gcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacatt 100  Q
    ||||||||||||||||| || ||||| | |||||||| ||   |||||||||||||| ||||||||| ||| ||| |||||||| |   |||||  |||     
T  22078 gcttagttaaataacaa-cagcaacacaagcagtatataaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaaatatacattcata 22176  T
Q  101 cttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
     |||||||||||| || ||||||||| ||| |||||||||||| ||||| ||||||  |||||||||||||||    
T  22177 attcaagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagatta 22249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 275
Target Start/End: Complemental strand, 7006 - 6889
Alignment:
Q  158 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 257  Q
    |||||||||||||| ||  |||| ||||||||||||| ||||| | || ||||| ||||| ||||| || |||||||||||||||||||   | |||| |    
T  7006 cagcttcacagattgcagttaacatcttatataggtcacattactacctaagggcccatccctaatcaactcatgcgacacagatcgcaacattctcaat 6907  T
Q  258 tgcactcagttctggaag 275  Q
    ||||||||||||||||||    
T  6906 tgcactcagttctggaag 6889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 47; Significance: 7e-18; HSPs: 2)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 8500 - 8585
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat--acaacagcatgacataattatatcaaattcaattcatcaacatct 84  Q
    ||||||||||||||||||||||| |||||||||||||||  | |||||||||| ||||  ||||||||| ||| ||||||||||||    
T  8500 gcagcttagttaaataacaaacaacaacataggcagtatgcaaaacagcatgatataacaatatcaaatgcaagtcatcaacatct 8585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 6569 - 6607
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  6569 gcagcttagttaaataacaaacagcaacataggcagtat 6607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 16687 - 16516
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatac---aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 97  Q
    |||||||||||||||||||| || ||||| | |||||||||   |||||||||||||||| |||||||||  || ||| || ||||| | | |||||  |    
T  16687 gcagcttagttaaataacaa-cagcaacacaagcagtatacgaaaacagcatgacataataatatcaaatggaagtcaacagcatctcaagtatacattc 16589  T
Q  98 attcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacaga 169  Q
    ||  |||||||||||| || ||||||||| ||| ||| |||||||| ||||| ||||||  ||||||||||||    
T  16588 ataattcaagtaatgcgtataacattatatcacatcaaaatcaacatcaacacatcttaaacagcttcacaga 16516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 47; Significance: 7e-18; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 17 - 185
Target Start/End: Original strand, 13141 - 13313
Alignment:
Q  17 acaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgc 113  Q
    ||||||| |||||||||||||||||||   |||||||||||||| ||||||| | ||| ||| || |||||||   || |||  || |||||||||||||    
T  13141 acaaacagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattcaattatacttcaagtaatgc 13240  T
Q  114 ata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttctt 185  Q
    | | ||||||||| |||  ||||||||||| ||||| ||||||  ||| ||||||||||| || |||| ||||    
T  13241 acataacattatatcacaacataatcaacatcaacacatcttaaacagtttcacagattataattaacatctt 13313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 34158 - 34200
Alignment:
Q  2 cagcttagttaaataacaaacatcaacataggcagtatacaac 44  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  34158 cagcttagttaaataacaaacaacaacataggcagtatacaac 34200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 8616 - 8446
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat--acaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaaca 98  Q
    |||||||||||||||||||     |||||||||||||||  | |||||||||||||||| ||||||| | ||| ||| || |||||||   || |||  |    
T  8616 gcagcttagttaaataacag----caacataggcagtatcaaaaacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattcaatta 8521  T
Q  99 ttcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    | |||||||||||||| | ||||||||| |||  ||||||||||| ||||| ||||||  |||||||||||||||    
T  8520 tacttcaagtaatgcacataacattatatcacaacataatcaacatcaacacatcttaaacagcttcacagatta 8446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 172
Target Start/End: Original strand, 25932 - 26103
Alignment:
Q  3 agcttagttaaataacaaacatcaacataggcagtatacaacag--catgacataattatatcaaattcaattcatcaacatcttatgcatacaaacatt 100  Q
    ||||||||||||||||||  | ||||||||||||||||||| |   ||||||||||| ||||||||| ||| | | |||||||| |   || |||  ||     
T  25932 agcttagttaaataacaat-agcaacataggcagtatacaaaatatcatgacataataatatcaaatgcaagtaaacaacatctcaaatattcaattata 26030  T
Q  101 cttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    |||||||||||||||  ||||||||| ||| |||||||||||| ||||  ||||||  |||||||||||||||    
T  26031 cttcaagtaatgcatttaacattatatcacatcataatcaacatcaacgcatcttaaacagcttcacagatta 26103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 172
Target Start/End: Original strand, 39894 - 40065
Alignment:
Q  3 agcttagttaaataacaaacatcaacataggcagtatac--aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacatt 100  Q
    ||||||||||||||||||  | |||||||||||||||||  || | ||||||||||| ||||||||| ||| | | |||||||| |   || |||  ||     
T  39894 agcttagttaaataacaat-agcaacataggcagtatacaaaatatcatgacataataatatcaaatgcaagtaaacaacatctcaaatattcaattata 39992  T
Q  101 cttcaagtaatgca-taaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    |||||||||||||| | ||||||||| ||| |||||||||||| ||||  ||||||  |||||||||| ||||    
T  39993 cttcaagtaatgcatttaacattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaaatta 40065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 117 - 217
Target Start/End: Original strand, 23995 - 24094
Alignment:
Q  117 aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccat 216  Q
    ||||||||| ||| ||||| ||||||  ||||| |||||  |||||||||||||| ||  |||||||||||||||||||||||| | |||||||||||||    
T  23995 aacattatatcacatcatattcaacactaacatctcttaa-cagcttcacagattgcagttaacttcttatataggtctcattactacccaagggtccat 24093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 44; Significance: 4e-16; HSPs: 3)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 28448 - 28536
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttat 87  Q
    |||||||||||||||||||| || |||||||||||||||||||   || ||||||||||| ||||||| | ||||||| |||||||||||    
T  28448 gcagcttagttaaataacaa-caacaacataggcagtatacaaaaacaacatgacataataatatcaattgcaattcaacaacatcttat 28536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 11326 - 11364
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  11326 gcagcttagttaaataacaaacagcaacataggcagtat 11364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 2031 - 2069
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat 39  Q
    |||||||||||||||||||||||  ||||||||||||||    
T  2031 gcagcttagttaaataacaaacacaaacataggcagtat 2069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2014 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold2014
Description:

Target: scaffold2014; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 1066 - 1151
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat--acaacagcatgacataattatatcaaattcaattcatcaacatct 84  Q
    ||||||||||||||||||||||| |||||||||||||||  | |||||||||| ||||  ||||||||| | | ||||||||||||    
T  1066 gcagcttagttaaataacaaacagcaacataggcagtatgcaaaacagcatgatataacaatatcaaatacgaatcatcaacatct 1151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 11530 - 11447
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacat 82  Q
    |||||||||||||||||||| || ||||||||| |||||||||   || ||||||||||| ||||||| ||||||||||||||||    
T  11530 gcagcttagttaaataacaa-caacaacataggtagtatacaaaaacaacatgacataataatatcaatttcaattcatcaacat 11447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 15483 - 15417
Alignment:
Q  20 aacatcaacataggcagtatacaa-cagcatgacataattatatcaaattcaattcatcaacatctt 85  Q
    ||||||||||||||||| |||||| |||||||||||||| ||||||| ||||||||| |||||||||    
T  15483 aacatcaacataggcagcatacaaacagcatgacataataatatcaatttcaattcaacaacatctt 15417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 3)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 33043 - 32901
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaaca 98  Q
    ||||||||||||| |||||| || ||||| |||||||||||||  |||||||||||||| ||||||| | ||||||| ||||||||||   || | |  |    
T  33043 gcagcttagttaattaacaa-cagcaacacaggcagtatacaaaacagcatgacataataatatcaattgcaattcaacaacatcttaaatattc-atta 32946  T
Q  99 ttcttcaagtaatgcata-aacattataacacttcataatcaaca 142  Q
    | |||| ||||||||||| ||||||||||||| |||| |||||||    
T  32945 tacttcgagtaatgcatataacattataacacatcatgatcaaca 32901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 45962 - 46104
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaaca 98  Q
    ||||||||||||| |||||| || ||||| |||||||||||||  |||||||||||||| ||||||| | ||||||| ||||||||||   || | |  |    
T  45962 gcagcttagttaattaacaa-cagcaacacaggcagtatacaaaacagcatgacataataatatcaattgcaattcaacaacatcttaaatattc-atta 46059  T
Q  99 ttcttcaagtaatgcata-aacattataacacttcataatcaaca 142  Q
    | |||| ||||||||||| ||||||||||||| |||| |||||||    
T  46060 tacttcgagtaatgcatataacattataacacatcatgatcaaca 46104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 16147 - 16298
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatac---aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 97  Q
    |||||||||||||||||| |||| |||||||||||||||||   ||||||| || || || ||||||||| |||  || || ||||| | | |||||  |    
T  16147 gcagcttagttaaataac-aacaacaacataggcagtatacaaaaacagcaagatatcataatatcaaatgcaagccaacatcatctcaagtatacattc 16245  T
Q  98 attcttcaagtaatgcata-aacattataacacttcataatcaacaacaacat 149  Q
    ||   |||||||||||||| ||||||||| ||| |||| ||||||| ||||||    
T  16246 ataactcaagtaatgcatataacattatatcacgtcatgatcaacatcaacat 16298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 158 - 275
Target Start/End: Original strand, 32626 - 32742
Alignment:
Q  158 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 257  Q
    |||||||||||||| ||| |||| | ||| | ||||| | ||| | |||| ||||||| ||||||  |||| ||||||||||||||||  | ||||||||    
T  32626 cagcttcacagattgcaattaacattttaaa-aggtcactttactacccaggggtccaactctaaacaaattatgcgacacagatcgcgatatcctcact 32724  T
Q  258 tgcactcagttctggaag 275  Q
    ||||||||||||||||||    
T  32725 tgcactcagttctggaag 32742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 46 - 168
Target Start/End: Original strand, 27911 - 28034
Alignment:
Q  46 gcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aacattataacacttcataatcaacaac 144  Q
    |||||||||||| ||||||||| ||| ||| |||||||| |   |||||  |||  ||||||||||||||| ||||||||| ||| |||||||||||| |    
T  27911 gcatgacataataatatcaaatgcaagtcaacaacatctcaaatatacattcataattcaagtaatgcatataacattatatcacatcataatcaacatc 28010  T
Q  145 aacatatcttattcagcttcacag 168  Q
    |||| ||||||  || ||||||||    
T  28011 aacaaatcttaaacaacttcacag 28034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 103 - 172
Target Start/End: Original strand, 1052 - 1122
Alignment:
Q  103 tcaagtaatgcataaa-cattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    |||||||||||||||| ||||||| ||| |||||||||||||||||| ||||||  || ||||||||||||    
T  1052 tcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacatcttcacagatta 1122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 42 - 155
Target Start/End: Complemental strand, 3574 - 3460
Alignment:
Q  42 aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aacattataacacttcataatcaa 140  Q
    |||||||||||||||| ||||||||| ||| ||| |||||||| |   |||||  |||  |||||||||||| || ||||||||| ||| ||||||||||    
T  3574 aacagcatgacataataatatcaaatgcaagtcaacaacatctcaattatacactcataattcaagtaatgcgtataacattatatcacatcataatcaa 3475  T
Q  141 caacaacatatctta 155  Q
    || ||||| ||||||    
T  3474 catcaacacatctta 3460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 2732 - 2694
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  2732 gcagcttagttaaataacaaacatcaacataggcagtat 2694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 275
Target Start/End: Complemental strand, 18584 - 18467
Alignment:
Q  158 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 257  Q
    |||||||||||||| ||  |||||||||||||||||||||||| | || ||||||||||| | ||| || | | || ||||||| | |    | ||||||    
T  18584 cagcttcacagattgcagttaacttcttatataggtctcattactacctaagggtccatcccaaatcaattgaagcaacacagaacacgacattctcact 18485  T
Q  258 tgcactcagttctggaag 275  Q
    ||||||||||||||||||    
T  18484 tgcactcagttctggaag 18467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 39947 - 40120
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatac--aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaaca 98  Q
    |||||||| |||||||||||  | |||||||||||||||||  |||| ||||||||||| ||||||||| ||  |||  |||||||||   ||   |  |    
T  39947 gcagcttaattaaataacaat-agcaacataggcagtatacaaaacaacatgacataataatatcaaatgcatgtcaataacatcttaaatatttgatta 40045  T
Q  99 ttcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    | |||||||||||||| | ||||||||| ||| |||||||||||| ||||| ||| ||   ||||||||||||||    
T  40046 tacttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcataaagagcttcacagatta 40120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 275
Target Start/End: Complemental strand, 21497 - 21380
Alignment:
Q  158 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 257  Q
    |||||||||| ||| ||  |||| ||||| ||||||| ||||| | || ||||||||||| ||||| || | |||||| ||||||||||   |||| |||    
T  21497 cagcttcacaaatttcagttaacatcttaaataggtcacattactacctaagggtccatccctaatcaatttatgcgaaacagatcgcaacatcctaact 21398  T
Q  258 tgcactcagttctggaag 275  Q
    |||| |||||||||||||    
T  21397 tgcattcagttctggaag 21380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 22757 - 22672
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatct 84  Q
    ||||||||||||||||||||||| | |||||| |||||| |||  || ||||| ||||  ||||| ||| ||| ||||||||||||    
T  22757 gcagcttagttaaataacaaacagcgacatagacagtatgcaaatcatcatgatataacaatatcgaatgcaagtcatcaacatct 22672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1296 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold1296
Description:

Target: scaffold1296; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 275
Target Start/End: Original strand, 582 - 698
Alignment:
Q  159 agcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcactt 258  Q
    ||||||||||||  ||| |||| ||||| ||||||| ||||| | || ||||||||||| | ||| || | |||||| ||||||||||   |||| ||||    
T  582 agcttcacagatctcaattaacatcttaaataggtcgcattactacctaagggtccatcccaaatcaacttatgcgaaacagatcgcaacatcctaactt 681  T
Q  259 gcactcagttctggaag 275  Q
    ||| |||||||||||||    
T  682 gcattcagttctggaag 698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 84
Target Start/End: Original strand, 12604 - 12687
Alignment:
Q  3 agcttagttaaataacaaacatcaacataggcagtat--acaacagcatgacataattatatcaaattcaattcatcaacatct 84  Q
    |||||||||||  |||||||| |||||||||||||||  | |||||||||| ||||  ||||||||| ||| ||||||||||||    
T  12604 agcttagttaataaacaaacagcaacataggcagtatgcaaaacagcatgatataacaatatcaaatgcaagtcatcaacatct 12687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1765 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1765
Description:

Target: scaffold1765; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 1116 - 1154
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  1116 gcagcttagttaaataacaaacaacaacataggcagtat 1154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 2893 - 2808
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatct 84  Q
    ||||||||||||||||||||||| | ||||||||||||| |||  || ||||| ||||  ||||||||| ||| ||| ||||||||    
T  2893 gcagcttagttaaataacaaacagctacataggcagtatgcaaatcatcatgatataacaatatcaaatgcaaatcaacaacatct 2808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 13162 - 13247
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat--acaacagcatgacataattatatcaaattcaattcatcaacatct 84  Q
    |||||||||||||  |||||||| |||||||||||||||  | |||||||||| ||||  ||||||||| ||| ||| ||||||||    
T  13162 gcagcttagttaataaacaaacaacaacataggcagtatgcaaaacagcatgatataacaatatcaaatgcaaatcaacaacatct 13247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 6645 - 6683
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  6645 gcagcttagttaaataacaaacaacaacataggcagtat 6683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 14025 - 14063
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  14025 gcagcttagttaaataacaaacaacaacataggcagtat 14063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 1156 - 1118
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  1156 gcagcttagttaaataacaaacaacaacataggcagtat 1118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 12980 - 13057
Alignment:
Q  8 agttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatc 83  Q
    |||||||||||||||| ||||||||||||||| |||  |||||||| ||||  ||||| ||| ||| |||||||||||    
T  12980 agttaaataacaaacaacaacataggcagtatgcaaatcagcatgatataacaatatcgaatgcaagtcatcaacatc 13057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 53636 - 53551
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat--acaacagcatgacataattatatcaaattcaattcatcaacatct 84  Q
    |||||||||||||  |||||||| |||||||||||||||  | |||| ||||| ||||  ||||||||| ||| ||||||||||||    
T  53636 gcagcttagttaataaacaaacagcaacataggcagtatgcaaaacaacatgatataacaatatcaaatgcaagtcatcaacatct 53551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 15864 - 15826
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  15864 gcagcttagttaaataacaaacaacaacataggcagtat 15826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0425 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0425
Description:

Target: scaffold0425; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 275
Target Start/End: Original strand, 348 - 465
Alignment:
Q  158 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 257  Q
    |||||||||||||| |   |||| |||||  |||||| ||||| | || ||||||||||| ||||| || | ||||||||||||||  | | |||| |||    
T  348 cagcttcacagatttccgttaacatcttaattaggtcacattactacctaagggtccatccctaatcaatttatgcgacacagatccaaatatcctaact 447  T
Q  258 tgcactcagttctggaag 275  Q
    ||||||||||||| ||||    
T  448 tgcactcagttctagaag 465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0412 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 275
Target Start/End: Complemental strand, 6344 - 6227
Alignment:
Q  158 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 257  Q
    |||||||||| ||| ||  |||| ||||| ||||||| ||||| | || ||||||||| | ||||| || | |||||| ||| |||||| | |||| |||    
T  6344 cagcttcacatatttcagttaacatcttaaataggtcacattactacctaagggtccaaccctaatcaacttatgcgaaacaaatcgcaatatcctaact 6245  T
Q  258 tgcactcagttctggaag 275  Q
    |||| |||||||||||||    
T  6244 tgcattcagttctggaag 6227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 167
Target Start/End: Complemental strand, 1021 - 881
Alignment:
Q  27 acataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aacattata 125  Q
    |||||||||||||||||||||||| |||||| ||||| ||| ||| ||| ||| |||| |   || ||| |||  ||||||||||||| | |||||||||    
T  1021 acataggcagtatacaacagcatggcataataatatc-aatgcaagtcaacaaaatctcaaatattcaatcataattcaagtaatgcacataacattata 923  T
Q  126 acacttcataatcaacaacaacatatcttattcagcttcaca 167  Q
     ||| || ||||| ||| ||||| ||||||  ||||||||||    
T  922 tcacatcgtaatcgacatcaacacatcttaaacagcttcaca 881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 274
Target Start/End: Complemental strand, 4861 - 4745
Alignment:
Q  158 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 257  Q
    |||||||||||||| ||   |||||||||||||||||  | |  | |||||| ||||| |||| || |||| |||||||||| |||||| | |||||| |    
T  4861 cagcttcacagattgcagtaaacttcttatataggtcataatgctacccaagagtccacctctgatcaaattatgcgacacaaatcgcaatgtcctcaat 4762  T
Q  258 tgcactcagttctggaa 274  Q
    ||||||| ||| |||||    
T  4761 tgcactcggttttggaa 4745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 23968 - 23932
Alignment:
Q  3 agcttagttaaataacaaacatcaacataggcagtat 39  Q
    ||||||||||||||||||||| |||||||||||||||    
T  23968 agcttagttaaataacaaacagcaacataggcagtat 23932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1984 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1984
Description:

Target: scaffold1984; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 163 - 201
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat 39  Q
    |||||||||||||| |||||||| |||||||||||||||    
T  163 gcagcttagttaaacaacaaacaacaacataggcagtat 201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 6846 - 6884
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat 39  Q
    |||||| |||||||||||||||| |||||||||||||||    
T  6846 gcagctcagttaaataacaaacagcaacataggcagtat 6884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 1121 - 1083
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat 39  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  1121 gcagcttagttaaataacaaacaacaacataggtagtat 1083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 5677 - 5715
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat 39  Q
    |||||||||| |||||||||||| |||||||||||||||    
T  5677 gcagcttagtaaaataacaaacagcaacataggcagtat 5715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 6210 - 6172
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat 39  Q
    |||||||||||||||||||||||  ||||||||||||||    
T  6210 gcagcttagttaaataacaaacagtaacataggcagtat 6172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 8161 - 8119
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa 43  Q
    |||||||||||||  |||||||| |||||||||||||||||||    
T  8161 gcagcttagttaacaaacaaacagcaacataggcagtatacaa 8119  T

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Target: scaffold0078 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 10561 - 10646
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatct 84  Q
    |||||||  |||||||||||||| ||||||||||||||| |||  || ||||| ||||  ||||| ||| ||| ||||||||||||    
T  10561 gcagcttttttaaataacaaacaacaacataggcagtatgcaaatcatcatgatataacaatatcgaatgcaagtcatcaacatct 10646  T

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Target: scaffold0074 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 38785 - 38704
Alignment:
Q  5 cttagttaaataacaaacatcaacataggcagtat--acaacagcatgacataattatatcaaattcaattcatcaacatct 84  Q
    ||||||||||||||||||| |||||||| ||||||  | |||| ||||| ||||  ||||||||| ||| ||||||| ||||    
T  38785 cttagttaaataacaaacagcaacatagacagtatgcaaaacaacatgatataacaatatcaaatgcaagtcatcaatatct 38704  T

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Target: scaffold0028 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 62232 - 62270
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat 39  Q
    |||||||||||||| |||||||| |||||||||||||||    
T  62232 gcagcttagttaaacaacaaacagcaacataggcagtat 62270  T

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Target: scaffold0010 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 60803 - 60761
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa 43  Q
    |||||||||||||  |||||||| |||||||||||||||||||    
T  60803 gcagcttagttaataaacaaacagcaacataggcagtatacaa 60761  T

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Target: scaffold0010; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 129943 - 130024
Alignment:
Q  5 cttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatct 84  Q
    ||||||||||||||| ||| ||||||||||||||| |||  || ||||| ||||  ||||| ||| ||| ||||||||||||    
T  129943 cttagttaaataacacacagcaacataggcagtatgcaaatcatcatgatataacaatatcgaatgcaagtcatcaacatct 130024  T

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Target: scaffold0001 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 160718 - 160756
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtat 39  Q
    |||||||||||||||||||| || |||||||||||||||    
T  160718 gcagcttagttaaataacaatcagcaacataggcagtat 160756  T

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Target: scaffold0615 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0615
Description:

Target: scaffold0615; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 275
Target Start/End: Complemental strand, 1988 - 1895
Alignment:
Q  182 tcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcacttgcactcagttctggaag 275  Q
    ||||| ||||||| ||||| | || ||||||||| | |||||  | |||||||||||||||| ||   | |||| |||||||||||||||||||    
T  1988 tcttaaataggtcacattactacctaagggtccaaccctaatcgattcatgcgacacagatcacaacattctcatttgcactcagttctggaag 1895  T

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Target: scaffold0476 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 12800 - 12884
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatc 83  Q
    ||||||||| ||||||||||||| ||||||||||| ||| |||  || ||||| ||||  ||||| ||| ||| |||||||||||    
T  12800 gcagcttagctaaataacaaacaacaacataggcaatatgcaaatcatcatgatataacaatatcgaatgcaagtcatcaacatc 12884  T

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Target: scaffold0165 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 3648 - 3689
Alignment:
Q  131 tcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    |||||||||||||||||| ||||||  |||||||||||||||    
T  3648 tcataatcaacaacaacacatcttaaacagcttcacagatta 3689  T

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Target: scaffold0165; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 7712 - 7753
Alignment:
Q  131 tcataatcaacaacaacatatcttattcagcttcacagatta 172  Q
    |||||||||||||||||| ||||||  |||||||||||||||    
T  7712 tcataatcaacaacaacacatcttaaacagcttcacagatta 7753  T

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Target: scaffold0158 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 275
Target Start/End: Original strand, 3030 - 3147
Alignment:
Q  158 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 257  Q
    |||||||||||||| ||| |||| || |||||||||| || || | || ||| ||||| | ||||| || | |||||||||||||| ||   ||||  ||    
T  3030 cagcttcacagattgcaattaacatcctatataggtcacactactacctaagagtccaaccctaatcaatttatgcgacacagatcacaacatcctatct 3129  T
Q  258 tgcactcagttctggaag 275  Q
    |||| |||||||||||||    
T  3130 tgcattcagttctggaag 3147  T

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Target: scaffold0158; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 275
Target Start/End: Original strand, 6696 - 6813
Alignment:
Q  158 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 257  Q
    |||||||||||||| ||| |||| || |||||||||| || || | || ||| ||||| | ||||| || | |||||||||||||| ||   ||||  ||    
T  6696 cagcttcacagattgcaattaacatcctatataggtcacactactacctaagagtccaaccctaatcaatttatgcgacacagatcacaacatcctatct 6795  T
Q  258 tgcactcagttctggaag 275  Q
    |||| |||||||||||||    
T  6796 tgcattcagttctggaag 6813  T

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Target: scaffold0008 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 14784 - 14747
Alignment:
Q  1 gcagcttagttaaataacaaacatcaacataggcagta 38  Q
    ||||||||||||| ||||||||| ||||||||||||||    
T  14784 gcagcttagttaactaacaaacagcaacataggcagta 14747  T

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